Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09636.t1 | XP_003611517.1 | 98.9 | 454 | 5 | 0 | 1 | 454 | 1 | 454 | 1.10E-255 | 892.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09636.t1 | O49543 | 77.2 | 457 | 97 | 3 | 1 | 454 | 1 | 453 | 7.6e-202 | 704.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09636.t1 | G7K149 | 98.9 | 454 | 5 | 0 | 1 | 454 | 1 | 454 | 7.7e-256 | 892.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050105 | MS.gene09636 | 0.810521 | 1.11E-50 | -1.69E-46 |
| MS.gene050571 | MS.gene09636 | 0.801348 | 9.39E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene09636 | 0.81904 | 1.43E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene09636 | 0.825627 | 4.23E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene09636 | 0.815935 | 7.16E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene09636 | 0.821098 | 4.84E-53 | -1.69E-46 |
| MS.gene053058 | MS.gene09636 | 0.813593 | 2.37E-51 | -1.69E-46 |
| MS.gene053931 | MS.gene09636 | 0.809567 | 1.78E-50 | -1.69E-46 |
| MS.gene055222 | MS.gene09636 | 0.82891 | 6.91E-55 | -1.69E-46 |
| MS.gene056849 | MS.gene09636 | 0.81852 | 1.88E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene09636 | 0.80053 | 1.38E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene09636 | 0.823107 | 1.66E-53 | -1.69E-46 |
| MS.gene060802 | MS.gene09636 | 0.817721 | 2.85E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene09636 | 0.815017 | 1.15E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene09636 | 0.808828 | 2.56E-50 | -1.69E-46 |
| MS.gene060851 | MS.gene09636 | 0.814554 | 1.45E-51 | -1.69E-46 |
| MS.gene060852 | MS.gene09636 | 0.812111 | 5.00E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09636.t1 | MTR_5g014820 | 98.899 | 454 | 5 | 0 | 1 | 454 | 1 | 454 | 0.0 | 934 |
| MS.gene09636.t1 | MTR_3g083980 | 25.773 | 388 | 255 | 9 | 56 | 421 | 77 | 453 | 1.51e-26 | 112 |
| MS.gene09636.t1 | MTR_3g083980 | 30.131 | 229 | 158 | 2 | 56 | 282 | 77 | 305 | 1.29e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09636.t1 | AT5G65720 | 77.243 | 457 | 97 | 3 | 1 | 454 | 1 | 453 | 0.0 | 737 |
| MS.gene09636.t1 | AT5G65720 | 77.243 | 457 | 97 | 3 | 1 | 454 | 1 | 453 | 0.0 | 737 |
| MS.gene09636.t1 | AT5G65720 | 84.308 | 325 | 51 | 0 | 130 | 454 | 1 | 325 | 0.0 | 583 |
| MS.gene09636.t1 | AT1G08490 | 34.061 | 229 | 149 | 2 | 56 | 282 | 74 | 302 | 3.45e-28 | 116 |
Find 156 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCAGCGGCTGTGGAAAA+AGG | 0.177503 | 5.2:-6755007 | None:intergenic |
| GTCGAATAATATTTCGATTA+AGG | 0.192556 | 5.2:+6755315 | MS.gene09636:CDS |
| TTGAGTGGGCATAAGGTTTA+TGG | 0.197767 | 5.2:+6755688 | MS.gene09636:CDS |
| TGAAGGGGAGAGTTTGCTTA+TGG | 0.259770 | 5.2:+6756011 | MS.gene09636:CDS |
| ACTGACGCTGCACAAGCTTT+AGG | 0.270299 | 5.2:+6755619 | MS.gene09636:CDS |
| GGGAAAATTTGTAAGGAGTT+TGG | 0.286795 | 5.2:+6755583 | MS.gene09636:CDS |
| TACGGGACTTGTTTCGGTTA+TGG | 0.292667 | 5.2:+6755516 | MS.gene09636:CDS |
| TTCCGGCGGTGGTTTCTTCA+TGG | 0.300497 | 5.2:-6755045 | None:intergenic |
| GACACCTTTCATGGTGATTC+CGG | 0.311773 | 5.2:-6755062 | None:intergenic |
| GCCGGATACGGGACTTGTTT+CGG | 0.316010 | 5.2:+6755510 | MS.gene09636:CDS |
| ACTCCGTTGGTTGTTGGAAT+GGG | 0.320591 | 5.2:+6755820 | MS.gene09636:CDS |
| GAAGGGGAGAGTTTGCTTAT+GGG | 0.323981 | 5.2:+6756012 | MS.gene09636:CDS |
| GAGTGATGGGTTGGTTGATT+TGG | 0.325186 | 5.2:+6755465 | MS.gene09636:CDS |
| TTGCAGCAGAGGTTGCTTAA+TGG | 0.330313 | 5.2:+6755901 | MS.gene09636:CDS |
| CTGACGCTGCACAAGCTTTA+GGG | 0.337630 | 5.2:+6755620 | MS.gene09636:CDS |
| TGCAGCAGAGGTTGCTTAAT+GGG | 0.337868 | 5.2:+6755902 | MS.gene09636:CDS |
| GGTGGTGGTGAATGGGAGTA+TGG | 0.341277 | 5.2:+6755945 | MS.gene09636:CDS |
| CTGGATGGGGTGGTGGTGAA+TGG | 0.346205 | 5.2:+6755937 | MS.gene09636:CDS |
| AGAAGTTGAGGAGTGCTATT+AGG | 0.350636 | 5.2:+6755488 | MS.gene09636:CDS |
| CCCGTACCCATTTCTACGGC+TGG | 0.374315 | 5.2:+6755197 | MS.gene09636:CDS |
| TCGAATAATATTTCGATTAA+GGG | 0.385351 | 5.2:+6755316 | MS.gene09636:CDS |
| ATATGGCTCATACTTCGATT+AGG | 0.385573 | 5.2:+6756127 | MS.gene09636:CDS |
| TACTCCGTTGGTTGTTGGAA+TGG | 0.389467 | 5.2:+6755819 | MS.gene09636:CDS |
| TGGTGAGGTGGTTACGGAGG+AGG | 0.390603 | 5.2:-6754961 | None:intergenic |
| TCCGGCGGTGGTTTCTTCAT+GGG | 0.390688 | 5.2:-6755044 | None:intergenic |
| ACACGCCCGGTCGCAGGTTG+CGG | 0.390870 | 5.2:+6755240 | MS.gene09636:CDS |
| GATGTCTTTGAGTGGGCATA+AGG | 0.393327 | 5.2:+6755681 | MS.gene09636:CDS |
| TGAGTGGGCATAAGGTTTAT+GGG | 0.393344 | 5.2:+6755689 | MS.gene09636:CDS |
| TCCTTCATCATTTCATAAAG+TGG | 0.393437 | 5.2:-6756240 | None:intergenic |
| TTCTTCATGGGGTTCTGTTA+AGG | 0.396635 | 5.2:-6755032 | None:intergenic |
| CGGACTCCCAGCCGTAGAAA+TGG | 0.398038 | 5.2:-6755204 | None:intergenic |
| AAGGGATAAGCTGGATGGGG+TGG | 0.400104 | 5.2:+6755927 | MS.gene09636:CDS |
| TTATGGGCCGAAAGGGGTGG+GGG | 0.405769 | 5.2:+6755705 | MS.gene09636:CDS |
| GCTCATACTTCGATTAGGTT+TGG | 0.406455 | 5.2:+6756132 | MS.gene09636:CDS |
| GAGTTTGCTTATGGGGTTGA+AGG | 0.406875 | 5.2:+6756020 | MS.gene09636:CDS |
| TATCTTCCTGTTGAGAGTGA+TGG | 0.407035 | 5.2:+6755451 | MS.gene09636:CDS |
| AAAAGGGTGGAGGCGGAGAT+GGG | 0.411530 | 5.2:-6754990 | None:intergenic |
| GTTCAACCTATGGAGGAGAT+TGG | 0.414522 | 5.2:+6755562 | MS.gene09636:CDS |
| CTTCGATTAGGTTTGGCATT+GGG | 0.414744 | 5.2:+6756139 | MS.gene09636:CDS |
| GGTTTATGGGCCGAAAGGGG+TGG | 0.415054 | 5.2:+6755702 | MS.gene09636:CDS |
| TTTCATGGTGATTCCGGCGG+TGG | 0.419672 | 5.2:-6755056 | None:intergenic |
| TTTATGGGCCGAAAGGGGTG+GGG | 0.420954 | 5.2:+6755704 | MS.gene09636:CDS |
| AGAGGTTGCTTAATGGGATA+AGG | 0.421140 | 5.2:+6755908 | MS.gene09636:CDS |
| TTGCCTACTCCGTTGGTTGT+TGG | 0.421419 | 5.2:+6755814 | MS.gene09636:CDS |
| AAGGGGAGAGTTTGCTTATG+GGG | 0.421444 | 5.2:+6756013 | MS.gene09636:CDS |
| GGATAAGCTGGATGGGGTGG+TGG | 0.432179 | 5.2:+6755930 | MS.gene09636:CDS |
| TGGATGGGGTGGTGGTGAAT+GGG | 0.433354 | 5.2:+6755938 | MS.gene09636:CDS |
| GGAGATTGGGAAAATTTGTA+AGG | 0.438605 | 5.2:+6755576 | MS.gene09636:CDS |
| AAAGGGTGGAGGCGGAGATG+GGG | 0.440610 | 5.2:-6754989 | None:intergenic |
| ACCGAAACAAGTCCCGTATC+CGG | 0.443986 | 5.2:-6755511 | None:intergenic |
| TGAGCGCCGCAACCTGCGAC+CGG | 0.444994 | 5.2:-6755246 | None:intergenic |
| CCATAGCGAGAGAGATAGAA+AGG | 0.446206 | 5.2:-6755163 | None:intergenic |
| TTCAACCTATGGAGGAGATT+GGG | 0.446730 | 5.2:+6755563 | MS.gene09636:CDS |
| TCAACATCAAGGATATCAAA+TGG | 0.447750 | 5.2:+6756268 | MS.gene09636:CDS |
| TTGTCGTTTGCGTATGTTGA+AGG | 0.448361 | 5.2:+6755994 | MS.gene09636:CDS |
| ATCTTCCTGTTGAGAGTGAT+GGG | 0.448623 | 5.2:+6755452 | MS.gene09636:CDS |
| TTCCACTTATCAACATCAAC+CGG | 0.453860 | 5.2:-6755649 | None:intergenic |
| GTGGACAAGAGAGAGGAATT+CGG | 0.454560 | 5.2:+6755782 | MS.gene09636:CDS |
| GGTGAGGTGGTTACGGAGGA+GGG | 0.460738 | 5.2:-6754960 | None:intergenic |
| ACCAACCCATCACTCTCAAC+AGG | 0.467489 | 5.2:-6755457 | None:intergenic |
| TGCTTGTGAGGTTGCTATGA+AGG | 0.470785 | 5.2:+6755846 | MS.gene09636:CDS |
| TAAGGCGGCTGCAGCGGCTG+TGG | 0.472228 | 5.2:-6755014 | None:intergenic |
| ATAAGGTTTATGGGCCGAAA+GGG | 0.472912 | 5.2:+6755698 | MS.gene09636:CDS |
| TCGAGGACACGTGGATCAAC+CGG | 0.476532 | 5.2:-6755130 | None:intergenic |
| ACAAGCTTTAGGGAAGATTC+CGG | 0.486704 | 5.2:+6755630 | MS.gene09636:CDS |
| CTCCGTTGGTTGTTGGAATG+GGG | 0.488403 | 5.2:+6755821 | MS.gene09636:CDS |
| TAATGGGATAAGGGATAAGC+TGG | 0.488843 | 5.2:+6755918 | MS.gene09636:CDS |
| GAGTGCTATTAGGCCGGATA+CGG | 0.489710 | 5.2:+6755498 | MS.gene09636:CDS |
| CAACATCAAGGATATCAAAT+GGG | 0.494187 | 5.2:+6756269 | MS.gene09636:CDS |
| CTGCGACCGGGCGTGTTCGA+TGG | 0.495997 | 5.2:-6755233 | None:intergenic |
| AGTATGGAAAGGCGATATGT+TGG | 0.496527 | 5.2:+6755961 | MS.gene09636:CDS |
| TCCTGTTGAGAGTGATGGGT+TGG | 0.497090 | 5.2:+6755456 | MS.gene09636:CDS |
| TTCTGTTAAGGCGGCTGCAG+CGG | 0.497105 | 5.2:-6755020 | None:intergenic |
| GTATGGAAAGGCGATATGTT+GGG | 0.501610 | 5.2:+6755962 | MS.gene09636:CDS |
| TTCAACAAGTCGAGAAGTTG+AGG | 0.502213 | 5.2:+6756208 | MS.gene09636:CDS |
| GTTTATGGGCCGAAAGGGGT+GGG | 0.503243 | 5.2:+6755703 | MS.gene09636:CDS |
| CATAAGGTTTATGGGCCGAA+AGG | 0.506451 | 5.2:+6755697 | MS.gene09636:CDS |
| AGATGGAGTATGATGAGAAG+AGG | 0.507636 | 5.2:+6755869 | MS.gene09636:CDS |
| GGATAAGGGATAAGCTGGAT+GGG | 0.510175 | 5.2:+6755923 | MS.gene09636:CDS |
| TGGAACTTTGCCTACTCCGT+TGG | 0.510183 | 5.2:+6755807 | MS.gene09636:CDS |
| CCTTTCTATCTCTCTCGCTA+TGG | 0.510730 | 5.2:+6755163 | MS.gene09636:CDS |
| TTCCGGTTGATGTTGATAAG+TGG | 0.511346 | 5.2:+6755647 | MS.gene09636:CDS |
| CCGGCGGTGGTTTCTTCATG+GGG | 0.512136 | 5.2:-6755043 | None:intergenic |
| CATCGAACACGCCCGGTCGC+AGG | 0.512270 | 5.2:+6755234 | MS.gene09636:CDS |
| GGACTCCCAGCCGTAGAAAT+GGG | 0.516463 | 5.2:-6755203 | None:intergenic |
| GAGGTTGCTTAATGGGATAA+GGG | 0.518331 | 5.2:+6755909 | MS.gene09636:CDS |
| ACTTCGATTAGGTTTGGCAT+TGG | 0.520063 | 5.2:+6756138 | MS.gene09636:CDS |
| CGTGTTGAGCCGCAGATGAA+TGG | 0.520939 | 5.2:+6755757 | MS.gene09636:CDS |
| TTCTTGTAGACATCTTCAGC+AGG | 0.522744 | 5.2:+6755411 | MS.gene09636:CDS |
| TGGTTGATTTGGAGAAGTTG+AGG | 0.525139 | 5.2:+6755476 | MS.gene09636:CDS |
| ATGAAAGGTGTCAAAATCTC+CGG | 0.525919 | 5.2:+6755073 | MS.gene09636:CDS |
| TGTATATGAGGAGGAGGCCG+AGG | 0.527269 | 5.2:+6755731 | MS.gene09636:CDS |
| GGGATAAGGGATAAGCTGGA+TGG | 0.529173 | 5.2:+6755922 | MS.gene09636:CDS |
| TTTGCTTATGGGGTTGAAGG+AGG | 0.529209 | 5.2:+6756023 | MS.gene09636:CDS |
| GGATTTCCGCGTTGCAGCAG+AGG | 0.529465 | 5.2:+6755890 | MS.gene09636:CDS |
| TGTCGTTTGCGTATGTTGAA+GGG | 0.532810 | 5.2:+6755995 | MS.gene09636:CDS |
| GATTGGTGTTGTTCAACCTA+TGG | 0.535457 | 5.2:+6755552 | MS.gene09636:CDS |
| GGCGTGTTCGATGGCATCAT+CGG | 0.536103 | 5.2:-6755224 | None:intergenic |
| TGACCGGGCGGTTCAGCTAA+CGG | 0.543215 | 5.2:+6756185 | MS.gene09636:CDS |
| CGATTAGGTTTGGCATTGGG+AGG | 0.544060 | 5.2:+6756142 | MS.gene09636:CDS |
| AATGCCCTCAAAACATAAGA+AGG | 0.544653 | 5.2:-6756090 | None:intergenic |
| CCCAGCCGTAGAAATGGGTA+CGG | 0.547317 | 5.2:-6755198 | None:intergenic |
| TAGAAATGGGTACGGGAGTG+AGG | 0.548247 | 5.2:-6755190 | None:intergenic |
| CACTCCCGTACCCATTTCTA+CGG | 0.551988 | 5.2:+6755193 | MS.gene09636:CDS |
| AATGGTGGTGGACAAGAGAG+AGG | 0.552172 | 5.2:+6755775 | MS.gene09636:CDS |
| TGCGGCTCAACACGAATCCT+CGG | 0.554915 | 5.2:-6755748 | None:intergenic |
| GTCGTTTGCGTATGTTGAAG+GGG | 0.555105 | 5.2:+6755996 | MS.gene09636:CDS |
| TCCACTTTATGAAATGATGA+AGG | 0.556496 | 5.2:+6756239 | MS.gene09636:CDS |
| GATAAGGGATAAGCTGGATG+GGG | 0.557474 | 5.2:+6755924 | MS.gene09636:CDS |
| GAGCGCCGCAACCTGCGACC+GGG | 0.559598 | 5.2:-6755245 | None:intergenic |
| GTCGAGGTAAAGAGGTCTGC+CGG | 0.562543 | 5.2:-6755092 | None:intergenic |
| CTACTGAGGAGGAAATTGAC+CGG | 0.565182 | 5.2:+6756169 | MS.gene09636:CDS |
| GCTTGAACGTCGAGGTAAAG+AGG | 0.565508 | 5.2:-6755100 | None:intergenic |
| CCGTACCCATTTCTACGGCT+GGG | 0.565561 | 5.2:+6755198 | MS.gene09636:CDS |
| TCCGTTGGTTGTTGGAATGG+GGG | 0.568051 | 5.2:+6755822 | MS.gene09636:CDS |
| TTCATGGGGTTCTGTTAAGG+CGG | 0.568639 | 5.2:-6755029 | None:intergenic |
| CATAGCGAGAGAGATAGAAA+GGG | 0.570821 | 5.2:-6755162 | None:intergenic |
| ATGGCTGTGAATAATGAGAT+TGG | 0.571213 | 5.2:+6755535 | MS.gene09636:CDS |
| AGTGCTATTAGGCCGGATAC+GGG | 0.571288 | 5.2:+6755499 | MS.gene09636:CDS |
| TGAGTTTGATGTCTTTGAGT+GGG | 0.586521 | 5.2:+6755674 | MS.gene09636:CDS |
| GTTGAGGAGTGCTATTAGGC+CGG | 0.587083 | 5.2:+6755492 | MS.gene09636:CDS |
| TCAACAAGTCGAGAAGTTGA+GGG | 0.588001 | 5.2:+6756209 | MS.gene09636:CDS |
| GAAGGAAGGTATCAACATCA+AGG | 0.588825 | 5.2:+6756257 | MS.gene09636:CDS |
| TTGTAGACATCTTCAGCAGG+AGG | 0.590133 | 5.2:+6755414 | MS.gene09636:CDS |
| TGAGGTTGCTATGAAGGAGA+TGG | 0.590778 | 5.2:+6755852 | MS.gene09636:CDS |
| ACCTTTCATGGTGATTCCGG+CGG | 0.598558 | 5.2:-6755059 | None:intergenic |
| ACCGCCGGAATCACCATGAA+AGG | 0.601352 | 5.2:+6755058 | MS.gene09636:CDS |
| GGGCGTTGTATATGAGGAGG+AGG | 0.601463 | 5.2:+6755725 | MS.gene09636:CDS |
| TGTAGACATCTTCAGCAGGA+GGG | 0.601543 | 5.2:+6755415 | MS.gene09636:CDS |
| AGAAATGGGTACGGGAGTGA+GGG | 0.601827 | 5.2:-6755189 | None:intergenic |
| ATGATGCCATCGAACACGCC+CGG | 0.608527 | 5.2:+6755227 | MS.gene09636:CDS |
| AGCATAGCGTCGAGGACACG+TGG | 0.615995 | 5.2:-6755139 | None:intergenic |
| AAGGAGGTTGCTGTTTCAAG+TGG | 0.616135 | 5.2:+6756039 | MS.gene09636:CDS |
| CTTTATGAAATGATGAAGGA+AGG | 0.617654 | 5.2:+6756243 | MS.gene09636:CDS |
| TGGTGTTGTTCAACCTATGG+AGG | 0.618626 | 5.2:+6755555 | MS.gene09636:CDS |
| GTGAGTTTGATGTCTTTGAG+TGG | 0.620168 | 5.2:+6755673 | MS.gene09636:CDS |
| CCAGCCGTAGAAATGGGTAC+GGG | 0.621685 | 5.2:-6755197 | None:intergenic |
| CATTGGGAGGTTCACTACTG+AGG | 0.622599 | 5.2:+6756155 | MS.gene09636:CDS |
| TAAGGTTTATGGGCCGAAAG+GGG | 0.624408 | 5.2:+6755699 | MS.gene09636:CDS |
| CGACGTTCAAGCAACCTCAC+CGG | 0.626457 | 5.2:+6755111 | MS.gene09636:CDS |
| TGGTGAATGGGAGTATGGAA+AGG | 0.628020 | 5.2:+6755950 | MS.gene09636:CDS |
| CGAAATATTATTCGACTCCG+TGG | 0.631375 | 5.2:-6755308 | None:intergenic |
| ATTCCAACAACCAACGGAGT+AGG | 0.633274 | 5.2:-6755817 | None:intergenic |
| GAACCGTTAGCTGAACCGCC+CGG | 0.633489 | 5.2:-6756188 | None:intergenic |
| GAGCCGCAGATGAATGGTGG+TGG | 0.634910 | 5.2:+6755763 | MS.gene09636:CDS |
| TACTGAGGAGGAAATTGACC+GGG | 0.636675 | 5.2:+6756170 | MS.gene09636:CDS |
| CCCCATGAAGAAACCACCGC+CGG | 0.643077 | 5.2:+6755043 | MS.gene09636:CDS |
| TGGGAGGTTCACTACTGAGG+AGG | 0.647331 | 5.2:+6756158 | MS.gene09636:CDS |
| GTTGAGCCGCAGATGAATGG+TGG | 0.674971 | 5.2:+6755760 | MS.gene09636:CDS |
| CAAGAGAGAGGAATTCGGAG+TGG | 0.677480 | 5.2:+6755787 | MS.gene09636:CDS |
| AGAAAGGGAGCATAGCGTCG+AGG | 0.683475 | 5.2:-6755147 | None:intergenic |
| GTGAGGTTGCTTGAACGTCG+AGG | 0.687866 | 5.2:-6755108 | None:intergenic |
| TGTCCACCACCATTCATCTG+CGG | 0.716490 | 5.2:-6755766 | None:intergenic |
| GACACGTGGATCAACCGGTG+AGG | 0.725063 | 5.2:-6755125 | None:intergenic |
| TGAGGAGGAAATTGACCGGG+CGG | 0.725831 | 5.2:+6756173 | MS.gene09636:CDS |
| AAGCAACCTCTGCTGCAACG+CGG | 0.734329 | 5.2:-6755896 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAGTAAAAACAATTTCTTT+AGG | - | chr5.2:6755283-6755302 | None:intergenic | 20.0% |
| !! | TCGAATAATATTTCGATTAA+GGG | + | chr5.2:6755316-6755335 | MS.gene09636:CDS | 20.0% |
| !!! | AAAGAAATTGTTTTTACTTC+AGG | + | chr5.2:6755283-6755302 | MS.gene09636:CDS | 20.0% |
| !!! | AAGAAATTGTTTTTACTTCA+GGG | + | chr5.2:6755284-6755303 | MS.gene09636:CDS | 20.0% |
| ! | GTCGAATAATATTTCGATTA+AGG | + | chr5.2:6755315-6755334 | MS.gene09636:CDS | 25.0% |
| !!! | AGAAATTGTTTTTACTTCAG+GGG | + | chr5.2:6755285-6755304 | MS.gene09636:CDS | 25.0% |
| CAACATCAAGGATATCAAAT+GGG | + | chr5.2:6756269-6756288 | MS.gene09636:CDS | 30.0% | |
| CTTTATGAAATGATGAAGGA+AGG | + | chr5.2:6756243-6756262 | MS.gene09636:CDS | 30.0% | |
| TCAACATCAAGGATATCAAA+TGG | + | chr5.2:6756268-6756287 | MS.gene09636:CDS | 30.0% | |
| TCCACTTTATGAAATGATGA+AGG | + | chr5.2:6756239-6756258 | MS.gene09636:CDS | 30.0% | |
| TCCTTCATCATTTCATAAAG+TGG | - | chr5.2:6756243-6756262 | None:intergenic | 30.0% | |
| AATGCCCTCAAAACATAAGA+AGG | - | chr5.2:6756093-6756112 | None:intergenic | 35.0% | |
| ATATGGCTCATACTTCGATT+AGG | + | chr5.2:6756127-6756146 | MS.gene09636:CDS | 35.0% | |
| ATGGCTGTGAATAATGAGAT+TGG | + | chr5.2:6755535-6755554 | MS.gene09636:CDS | 35.0% | |
| GGAGATTGGGAAAATTTGTA+AGG | + | chr5.2:6755576-6755595 | MS.gene09636:CDS | 35.0% | |
| GGGAAAATTTGTAAGGAGTT+TGG | + | chr5.2:6755583-6755602 | MS.gene09636:CDS | 35.0% | |
| TGAGTTTGATGTCTTTGAGT+GGG | + | chr5.2:6755674-6755693 | MS.gene09636:CDS | 35.0% | |
| TTCCACTTATCAACATCAAC+CGG | - | chr5.2:6755652-6755671 | None:intergenic | 35.0% | |
| ! | TAGAGCCTTCTTATGTTTTG+AGG | + | chr5.2:6756085-6756104 | MS.gene09636:CDS | 35.0% |
| !! | AGAGCCTTCTTATGTTTTGA+GGG | + | chr5.2:6756086-6756105 | MS.gene09636:CDS | 35.0% |
| !! | ATGAAAGGTGTCAAAATCTC+CGG | + | chr5.2:6755073-6755092 | MS.gene09636:CDS | 35.0% |
| !!! | TCTTATGTTTTGAGGGCATT+GGG | + | chr5.2:6756093-6756112 | MS.gene09636:CDS | 35.0% |
| !!! | TTCTTATGTTTTGAGGGCAT+TGG | + | chr5.2:6756092-6756111 | MS.gene09636:CDS | 35.0% |
| ACTTCGATTAGGTTTGGCAT+TGG | + | chr5.2:6756138-6756157 | MS.gene09636:CDS | 40.0% | |
| AGAGGTTGCTTAATGGGATA+AGG | + | chr5.2:6755908-6755927 | MS.gene09636:CDS | 40.0% | |
| AGATGGAGTATGATGAGAAG+AGG | + | chr5.2:6755869-6755888 | MS.gene09636:CDS | 40.0% | |
| AGTATGGAAAGGCGATATGT+TGG | + | chr5.2:6755961-6755980 | MS.gene09636:CDS | 40.0% | |
| ATAAGGTTTATGGGCCGAAA+GGG | + | chr5.2:6755698-6755717 | MS.gene09636:CDS | 40.0% | |
| ATCTTCCTGTTGAGAGTGAT+GGG | + | chr5.2:6755452-6755471 | MS.gene09636:CDS | 40.0% | |
| CATAGCGAGAGAGATAGAAA+GGG | - | chr5.2:6755165-6755184 | None:intergenic | 40.0% | |
| CGAAATATTATTCGACTCCG+TGG | - | chr5.2:6755311-6755330 | None:intergenic | 40.0% | |
| CTTCGATTAGGTTTGGCATT+GGG | + | chr5.2:6756139-6756158 | MS.gene09636:CDS | 40.0% | |
| GAGGTTGCTTAATGGGATAA+GGG | + | chr5.2:6755909-6755928 | MS.gene09636:CDS | 40.0% | |
| GCTCATACTTCGATTAGGTT+TGG | + | chr5.2:6756132-6756151 | MS.gene09636:CDS | 40.0% | |
| GTATGGAAAGGCGATATGTT+GGG | + | chr5.2:6755962-6755981 | MS.gene09636:CDS | 40.0% | |
| GTGAGTTTGATGTCTTTGAG+TGG | + | chr5.2:6755673-6755692 | MS.gene09636:CDS | 40.0% | |
| TAATGGGATAAGGGATAAGC+TGG | + | chr5.2:6755918-6755937 | MS.gene09636:CDS | 40.0% | |
| TATCTTCCTGTTGAGAGTGA+TGG | + | chr5.2:6755451-6755470 | MS.gene09636:CDS | 40.0% | |
| TCAACAAGTCGAGAAGTTGA+GGG | + | chr5.2:6756209-6756228 | MS.gene09636:CDS | 40.0% | |
| TGAGTGGGCATAAGGTTTAT+GGG | + | chr5.2:6755689-6755708 | MS.gene09636:CDS | 40.0% | |
| TTCAACAAGTCGAGAAGTTG+AGG | + | chr5.2:6756208-6756227 | MS.gene09636:CDS | 40.0% | |
| TTCAACCTATGGAGGAGATT+GGG | + | chr5.2:6755563-6755582 | MS.gene09636:CDS | 40.0% | |
| TTCTTCATGGGGTTCTGTTA+AGG | - | chr5.2:6755035-6755054 | None:intergenic | 40.0% | |
| TTCTTGTAGACATCTTCAGC+AGG | + | chr5.2:6755411-6755430 | MS.gene09636:CDS | 40.0% | |
| TTGAGTGGGCATAAGGTTTA+TGG | + | chr5.2:6755688-6755707 | MS.gene09636:CDS | 40.0% | |
| ! | ATTTTCCCAATCTCCTCCAT+AGG | - | chr5.2:6755571-6755590 | None:intergenic | 40.0% |
| ! | GGGTGTGTTGCATTTTTACA+AGG | + | chr5.2:6755336-6755355 | MS.gene09636:CDS | 40.0% |
| ! | TGTCGTTTGCGTATGTTGAA+GGG | + | chr5.2:6755995-6756014 | MS.gene09636:CDS | 40.0% |
| ! | TTCCGGTTGATGTTGATAAG+TGG | + | chr5.2:6755647-6755666 | MS.gene09636:CDS | 40.0% |
| ! | TTGTCGTTTGCGTATGTTGA+AGG | + | chr5.2:6755994-6756013 | MS.gene09636:CDS | 40.0% |
| !! | ACAAGCTTTAGGGAAGATTC+CGG | + | chr5.2:6755630-6755649 | MS.gene09636:CDS | 40.0% |
| !! | AGAAGTTGAGGAGTGCTATT+AGG | + | chr5.2:6755488-6755507 | MS.gene09636:CDS | 40.0% |
| !! | GAAGGAAGGTATCAACATCA+AGG | + | chr5.2:6756257-6756276 | MS.gene09636:CDS | 40.0% |
| !! | GATTGGTGTTGTTCAACCTA+TGG | + | chr5.2:6755552-6755571 | MS.gene09636:CDS | 40.0% |
| !! | GGAGATTTTGACACCTTTCA+TGG | - | chr5.2:6755074-6755093 | None:intergenic | 40.0% |
| !! | TGGTTGATTTGGAGAAGTTG+AGG | + | chr5.2:6755476-6755495 | MS.gene09636:CDS | 40.0% |
| !!! | CTTATGTTTTGAGGGCATTG+GGG | + | chr5.2:6756094-6756113 | MS.gene09636:CDS | 40.0% |
| !!! | GTTTTTTGGTGAGGTGGTTA+CGG | - | chr5.2:6754970-6754989 | None:intergenic | 40.0% |
| !!! | TTATGTTTTGAGGGCATTGG+GGG | + | chr5.2:6756095-6756114 | MS.gene09636:CDS | 40.0% |
| ATTCCAACAACCAACGGAGT+AGG | - | chr5.2:6755820-6755839 | None:intergenic | 45.0% | |
| CATAAGGTTTATGGGCCGAA+AGG | + | chr5.2:6755697-6755716 | MS.gene09636:CDS | 45.0% | |
| CCATAGCGAGAGAGATAGAA+AGG | - | chr5.2:6755166-6755185 | None:intergenic | 45.0% | |
| CCTTTCTATCTCTCTCGCTA+TGG | + | chr5.2:6755163-6755182 | MS.gene09636:CDS | 45.0% | |
| CTACTGAGGAGGAAATTGAC+CGG | + | chr5.2:6756169-6756188 | MS.gene09636:CDS | 45.0% | |
| GACACCTTTCATGGTGATTC+CGG | - | chr5.2:6755065-6755084 | None:intergenic | 45.0% | |
| GATAAGGGATAAGCTGGATG+GGG | + | chr5.2:6755924-6755943 | MS.gene09636:CDS | 45.0% | |
| GATGTCTTTGAGTGGGCATA+AGG | + | chr5.2:6755681-6755700 | MS.gene09636:CDS | 45.0% | |
| GGATAAGGGATAAGCTGGAT+GGG | + | chr5.2:6755923-6755942 | MS.gene09636:CDS | 45.0% | |
| GTCGTTTGCGTATGTTGAAG+GGG | + | chr5.2:6755996-6756015 | MS.gene09636:CDS | 45.0% | |
| GTGGACAAGAGAGAGGAATT+CGG | + | chr5.2:6755782-6755801 | MS.gene09636:CDS | 45.0% | |
| GTTCAACCTATGGAGGAGAT+TGG | + | chr5.2:6755562-6755581 | MS.gene09636:CDS | 45.0% | |
| TAAGGTTTATGGGCCGAAAG+GGG | + | chr5.2:6755699-6755718 | MS.gene09636:CDS | 45.0% | |
| TACTGAGGAGGAAATTGACC+GGG | + | chr5.2:6756170-6756189 | MS.gene09636:CDS | 45.0% | |
| TGAGGTTGCTATGAAGGAGA+TGG | + | chr5.2:6755852-6755871 | MS.gene09636:CDS | 45.0% | |
| TGCAGCAGAGGTTGCTTAAT+GGG | + | chr5.2:6755902-6755921 | MS.gene09636:CDS | 45.0% | |
| TGCTTGTGAGGTTGCTATGA+AGG | + | chr5.2:6755846-6755865 | MS.gene09636:CDS | 45.0% | |
| TGTAGACATCTTCAGCAGGA+GGG | + | chr5.2:6755415-6755434 | MS.gene09636:CDS | 45.0% | |
| TTCATGGGGTTCTGTTAAGG+CGG | - | chr5.2:6755032-6755051 | None:intergenic | 45.0% | |
| TTGCAGCAGAGGTTGCTTAA+TGG | + | chr5.2:6755901-6755920 | MS.gene09636:CDS | 45.0% | |
| TTGTAGACATCTTCAGCAGG+AGG | + | chr5.2:6755414-6755433 | MS.gene09636:CDS | 45.0% | |
| TTTGCTTATGGGGTTGAAGG+AGG | + | chr5.2:6756023-6756042 | MS.gene09636:CDS | 45.0% | |
| ! | AAGGGGAGAGTTTGCTTATG+GGG | + | chr5.2:6756013-6756032 | MS.gene09636:CDS | 45.0% |
| ! | ACTCCGTTGGTTGTTGGAAT+GGG | + | chr5.2:6755820-6755839 | MS.gene09636:CDS | 45.0% |
| ! | GAAGGGGAGAGTTTGCTTAT+GGG | + | chr5.2:6756012-6756031 | MS.gene09636:CDS | 45.0% |
| ! | GAGGGAAGTGAAGAGTTTTG+AGG | - | chr5.2:6754945-6754964 | None:intergenic | 45.0% |
| ! | GAGTTTGCTTATGGGGTTGA+AGG | + | chr5.2:6756020-6756039 | MS.gene09636:CDS | 45.0% |
| ! | TACGGGACTTGTTTCGGTTA+TGG | + | chr5.2:6755516-6755535 | MS.gene09636:CDS | 45.0% |
| ! | TACTCCGTTGGTTGTTGGAA+TGG | + | chr5.2:6755819-6755838 | MS.gene09636:CDS | 45.0% |
| ! | TGAAGGGGAGAGTTTGCTTA+TGG | + | chr5.2:6756011-6756030 | MS.gene09636:CDS | 45.0% |
| ! | TGGTGAATGGGAGTATGGAA+AGG | + | chr5.2:6755950-6755969 | MS.gene09636:CDS | 45.0% |
| !! | AAGGAGGTTGCTGTTTCAAG+TGG | + | chr5.2:6756039-6756058 | MS.gene09636:CDS | 45.0% |
| !! | GAGTGATGGGTTGGTTGATT+TGG | + | chr5.2:6755465-6755484 | MS.gene09636:CDS | 45.0% |
| !! | TGGTGTTGTTCAACCTATGG+AGG | + | chr5.2:6755555-6755574 | MS.gene09636:CDS | 45.0% |
| !! | TGTTTTTACTTCAGGGGCCA+CGG | + | chr5.2:6755291-6755310 | MS.gene09636:CDS | 45.0% |
| ACCAACCCATCACTCTCAAC+AGG | - | chr5.2:6755460-6755479 | None:intergenic | 50.0% | |
| ACCGAAACAAGTCCCGTATC+CGG | - | chr5.2:6755514-6755533 | None:intergenic | 50.0% | |
| ACCTTTCATGGTGATTCCGG+CGG | - | chr5.2:6755062-6755081 | None:intergenic | 50.0% | |
| ACTGACGCTGCACAAGCTTT+AGG | + | chr5.2:6755619-6755638 | MS.gene09636:CDS | 50.0% | |
| AGAAATGGGTACGGGAGTGA+GGG | - | chr5.2:6755192-6755211 | None:intergenic | 50.0% | |
| ATTGGGGGTCGAAGAGGATA+TGG | + | chr5.2:6756110-6756129 | MS.gene09636:CDS | 50.0% | |
| CAAGAGAGAGGAATTCGGAG+TGG | + | chr5.2:6755787-6755806 | MS.gene09636:CDS | 50.0% | |
| CACTCCCGTACCCATTTCTA+CGG | + | chr5.2:6755193-6755212 | MS.gene09636:CDS | 50.0% | |
| CATTGGGAGGTTCACTACTG+AGG | + | chr5.2:6756155-6756174 | MS.gene09636:CDS | 50.0% | |
| CTGACGCTGCACAAGCTTTA+GGG | + | chr5.2:6755620-6755639 | MS.gene09636:CDS | 50.0% | |
| GCTTGAACGTCGAGGTAAAG+AGG | - | chr5.2:6755103-6755122 | None:intergenic | 50.0% | |
| GGGATAAGGGATAAGCTGGA+TGG | + | chr5.2:6755922-6755941 | MS.gene09636:CDS | 50.0% | |
| TAGAAATGGGTACGGGAGTG+AGG | - | chr5.2:6755193-6755212 | None:intergenic | 50.0% | |
| TGGAACTTTGCCTACTCCGT+TGG | + | chr5.2:6755807-6755826 | MS.gene09636:CDS | 50.0% | |
| TGTCCACCACCATTCATCTG+CGG | - | chr5.2:6755769-6755788 | None:intergenic | 50.0% | |
| ! | AGTGCTATTAGGCCGGATAC+GGG | + | chr5.2:6755499-6755518 | MS.gene09636:CDS | 50.0% |
| ! | CGATTAGGTTTGGCATTGGG+AGG | + | chr5.2:6756142-6756161 | MS.gene09636:CDS | 50.0% |
| ! | CTCCGTTGGTTGTTGGAATG+GGG | + | chr5.2:6755821-6755840 | MS.gene09636:CDS | 50.0% |
| ! | GAGTGCTATTAGGCCGGATA+CGG | + | chr5.2:6755498-6755517 | MS.gene09636:CDS | 50.0% |
| ! | TCCGTTGGTTGTTGGAATGG+GGG | + | chr5.2:6755822-6755841 | MS.gene09636:CDS | 50.0% |
| ! | TTGCCTACTCCGTTGGTTGT+TGG | + | chr5.2:6755814-6755833 | MS.gene09636:CDS | 50.0% |
| ! | TTTTGGTGAGGTGGTTACGG+AGG | - | chr5.2:6754967-6754986 | None:intergenic | 50.0% |
| !! | AATGGTGGTGGACAAGAGAG+AGG | + | chr5.2:6755775-6755794 | MS.gene09636:CDS | 50.0% |
| !! | GTTGAGGAGTGCTATTAGGC+CGG | + | chr5.2:6755492-6755511 | MS.gene09636:CDS | 50.0% |
| !! | TCCTGTTGAGAGTGATGGGT+TGG | + | chr5.2:6755456-6755475 | MS.gene09636:CDS | 50.0% |
| !!! | GATGGGGTTTTTTGGTGAGG+TGG | - | chr5.2:6754976-6754995 | None:intergenic | 50.0% |
| !!! | GGAGATGGGGTTTTTTGGTG+AGG | - | chr5.2:6754979-6754998 | None:intergenic | 50.0% |
| AAAAAGGGTGGAGGCGGAGA+TGG | - | chr5.2:6754994-6755013 | None:intergenic | 55.0% | |
| AAAAGGGTGGAGGCGGAGAT+GGG | - | chr5.2:6754993-6755012 | None:intergenic | 55.0% | |
| AAGCAACCTCTGCTGCAACG+CGG | - | chr5.2:6755899-6755918 | None:intergenic | 55.0% | |
| AAGGGATAAGCTGGATGGGG+TGG | + | chr5.2:6755927-6755946 | MS.gene09636:CDS | 55.0% | |
| ACCGCCGGAATCACCATGAA+AGG | + | chr5.2:6755058-6755077 | MS.gene09636:CDS | 55.0% | |
| ATGATGCCATCGAACACGCC+CGG | + | chr5.2:6755227-6755246 | MS.gene09636:CDS | 55.0% | |
| CCAGCCGTAGAAATGGGTAC+GGG | - | chr5.2:6755200-6755219 | None:intergenic | 55.0% | |
| CCCAGCCGTAGAAATGGGTA+CGG | - | chr5.2:6755201-6755220 | None:intergenic | 55.0% | |
| CCGTACCCATTTCTACGGCT+GGG | + | chr5.2:6755198-6755217 | MS.gene09636:CDS | 55.0% | |
| CGACGTTCAAGCAACCTCAC+CGG | + | chr5.2:6755111-6755130 | MS.gene09636:CDS | 55.0% | |
| CGTGTTGAGCCGCAGATGAA+TGG | + | chr5.2:6755757-6755776 | MS.gene09636:CDS | 55.0% | |
| CTGCAGCGGCTGTGGAAAAA+GGG | - | chr5.2:6755009-6755028 | None:intergenic | 55.0% | |
| CTGTGGAAAAAGGGTGGAGG+CGG | - | chr5.2:6755000-6755019 | None:intergenic | 55.0% | |
| GCCCCCATTCCAACAACCAA+CGG | - | chr5.2:6755826-6755845 | None:intergenic | 55.0% | |
| GGACTCCCAGCCGTAGAAAT+GGG | - | chr5.2:6755206-6755225 | None:intergenic | 55.0% | |
| GGCGTGTTCGATGGCATCAT+CGG | - | chr5.2:6755227-6755246 | None:intergenic | 55.0% | |
| GTCGAGGTAAAGAGGTCTGC+CGG | - | chr5.2:6755095-6755114 | None:intergenic | 55.0% | |
| GTGAGGTTGCTTGAACGTCG+AGG | - | chr5.2:6755111-6755130 | None:intergenic | 55.0% | |
| GTTGAGCCGCAGATGAATGG+TGG | + | chr5.2:6755760-6755779 | MS.gene09636:CDS | 55.0% | |
| GTTTATGGGCCGAAAGGGGT+GGG | + | chr5.2:6755703-6755722 | MS.gene09636:CDS | 55.0% | |
| TCCGGCGGTGGTTTCTTCAT+GGG | - | chr5.2:6755047-6755066 | None:intergenic | 55.0% | |
| TCGAGGACACGTGGATCAAC+CGG | - | chr5.2:6755133-6755152 | None:intergenic | 55.0% | |
| TGAGGAGGAAATTGACCGGG+CGG | + | chr5.2:6756173-6756192 | MS.gene09636:CDS | 55.0% | |
| TGCGGCTCAACACGAATCCT+CGG | - | chr5.2:6755751-6755770 | None:intergenic | 55.0% | |
| TGGGAGGTTCACTACTGAGG+AGG | + | chr5.2:6756158-6756177 | MS.gene09636:CDS | 55.0% | |
| TGTATATGAGGAGGAGGCCG+AGG | + | chr5.2:6755731-6755750 | MS.gene09636:CDS | 55.0% | |
| TTCCGGCGGTGGTTTCTTCA+TGG | - | chr5.2:6755048-6755067 | None:intergenic | 55.0% | |
| TTCTGTTAAGGCGGCTGCAG+CGG | - | chr5.2:6755023-6755042 | None:intergenic | 55.0% | |
| TTTATGGGCCGAAAGGGGTG+GGG | + | chr5.2:6755704-6755723 | MS.gene09636:CDS | 55.0% | |
| TTTCATGGTGATTCCGGCGG+TGG | - | chr5.2:6755059-6755078 | None:intergenic | 55.0% | |
| ! | AGAAAGGGAGCATAGCGTCG+AGG | - | chr5.2:6755150-6755169 | None:intergenic | 55.0% |
| ! | GCCGGATACGGGACTTGTTT+CGG | + | chr5.2:6755510-6755529 | MS.gene09636:CDS | 55.0% |
| ! | GGGCGTTGTATATGAGGAGG+AGG | + | chr5.2:6755725-6755744 | MS.gene09636:CDS | 55.0% |
| ! | GGTGGTGGTGAATGGGAGTA+TGG | + | chr5.2:6755945-6755964 | MS.gene09636:CDS | 55.0% |
| ! | TGGATGGGGTGGTGGTGAAT+GGG | + | chr5.2:6755938-6755957 | MS.gene09636:CDS | 55.0% |
| !! | TGGGGGCGTTGTATATGAGG+AGG | + | chr5.2:6755722-6755741 | MS.gene09636:CDS | 55.0% |
| !!! | GAGGCGGAGATGGGGTTTTT+TGG | - | chr5.2:6754984-6755003 | None:intergenic | 55.0% |
| AAAGGGTGGAGGCGGAGATG+GGG | - | chr5.2:6754992-6755011 | None:intergenic | 60.0% | |
| CAGCGGCTGTGGAAAAAGGG+TGG | - | chr5.2:6755006-6755025 | None:intergenic | 60.0% | |
| CCCCATGAAGAAACCACCGC+CGG | + | chr5.2:6755043-6755062 | MS.gene09636:CDS | 60.0% | |
| CCCGTACCCATTTCTACGGC+TGG | + | chr5.2:6755197-6755216 | MS.gene09636:CDS | 60.0% | |
| CCGGCGGTGGTTTCTTCATG+GGG | - | chr5.2:6755046-6755065 | None:intergenic | 60.0% | |
| CGGACTCCCAGCCGTAGAAA+TGG | - | chr5.2:6755207-6755226 | None:intergenic | 60.0% | |
| CGGCTGTGGAAAAAGGGTGG+AGG | - | chr5.2:6755003-6755022 | None:intergenic | 60.0% | |
| GAACCGTTAGCTGAACCGCC+CGG | - | chr5.2:6756191-6756210 | None:intergenic | 60.0% | |
| GACACGTGGATCAACCGGTG+AGG | - | chr5.2:6755128-6755147 | None:intergenic | 60.0% | |
| GAGCCGCAGATGAATGGTGG+TGG | + | chr5.2:6755763-6755782 | MS.gene09636:CDS | 60.0% | |
| GCTGCAGCGGCTGTGGAAAA+AGG | - | chr5.2:6755010-6755029 | None:intergenic | 60.0% | |
| GGATAAGCTGGATGGGGTGG+TGG | + | chr5.2:6755930-6755949 | MS.gene09636:CDS | 60.0% | |
| GGATTTCCGCGTTGCAGCAG+AGG | + | chr5.2:6755890-6755909 | MS.gene09636:CDS | 60.0% | |
| GGTGAGGTGGTTACGGAGGA+GGG | - | chr5.2:6754963-6754982 | None:intergenic | 60.0% | |
| GGTTTATGGGCCGAAAGGGG+TGG | + | chr5.2:6755702-6755721 | MS.gene09636:CDS | 60.0% | |
| TACAACGCCCCCACCCCTTT+CGG | - | chr5.2:6755715-6755734 | None:intergenic | 60.0% | |
| TGACCGGGCGGTTCAGCTAA+CGG | + | chr5.2:6756185-6756204 | MS.gene09636:CDS | 60.0% | |
| TGGAATGGGGGCTGCTTGTG+AGG | + | chr5.2:6755834-6755853 | MS.gene09636:CDS | 60.0% | |
| TGGTGAGGTGGTTACGGAGG+AGG | - | chr5.2:6754964-6754983 | None:intergenic | 60.0% | |
| TTATGGGCCGAAAGGGGTGG+GGG | + | chr5.2:6755705-6755724 | MS.gene09636:CDS | 60.0% | |
| ! | AGCATAGCGTCGAGGACACG+TGG | - | chr5.2:6755142-6755161 | None:intergenic | 60.0% |
| ! | CTGGATGGGGTGGTGGTGAA+TGG | + | chr5.2:6755937-6755956 | MS.gene09636:CDS | 60.0% |
| !! | GGGTGGGGGCGTTGTATATG+AGG | + | chr5.2:6755719-6755738 | MS.gene09636:CDS | 60.0% |
| !! | GAGGGCATTGGGGGTCGAAG+AGG | + | chr5.2:6756104-6756123 | MS.gene09636:CDS | 65.0% |
| ACACGCCCGGTCGCAGGTTG+CGG | + | chr5.2:6755240-6755259 | MS.gene09636:CDS | 70.0% | |
| CATCGAACACGCCCGGTCGC+AGG | + | chr5.2:6755234-6755253 | MS.gene09636:CDS | 70.0% | |
| CTGCGACCGGGCGTGTTCGA+TGG | - | chr5.2:6755236-6755255 | None:intergenic | 70.0% | |
| TAAGGCGGCTGCAGCGGCTG+TGG | - | chr5.2:6755017-6755036 | None:intergenic | 70.0% | |
| ! | TGAGCGCCGCAACCTGCGAC+CGG | - | chr5.2:6755249-6755268 | None:intergenic | 70.0% |
| ! | GAGCGCCGCAACCTGCGACC+GGG | - | chr5.2:6755248-6755267 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 6754938 | 6756302 | 6754938 | ID=MS.gene09636 |
| chr5.2 | mRNA | 6754938 | 6756302 | 6754938 | ID=MS.gene09636.t1;Parent=MS.gene09636 |
| chr5.2 | exon | 6754938 | 6756302 | 6754938 | ID=MS.gene09636.t1.exon1;Parent=MS.gene09636.t1 |
| chr5.2 | CDS | 6754938 | 6756302 | 6754938 | ID=cds.MS.gene09636.t1;Parent=MS.gene09636.t1 |
| Gene Sequence |
| Protein sequence |
