AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050962


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050962.t1 MTR_7g111980 90.223 583 44 6 1 579 1 574 0.0 1040
MS.gene050962.t1 MTR_7g111980 93.279 491 32 1 90 579 1 491 0.0 922
MS.gene050962.t1 MTR_7g111960 59.797 592 192 14 1 577 1 561 0.0 623
MS.gene050962.t1 MTR_7g112000 47.104 518 232 13 62 571 41 524 4.48e-131 394
MS.gene050962.t1 MTR_2g450080 29.091 550 332 15 64 571 53 586 2.52e-52 189
MS.gene050962.t1 MTR_8g104490 36.950 341 186 11 65 387 50 379 3.48e-51 183
MS.gene050962.t1 MTR_6g083730 34.604 341 202 8 61 387 48 381 7.63e-51 182
MS.gene050962.t1 MTR_4g090970 35.522 335 197 8 64 385 54 382 3.09e-50 184
MS.gene050962.t1 MTR_8g104510 35.484 341 191 10 65 387 50 379 1.65e-48 176
MS.gene050962.t1 MTR_4g106810 28.782 542 322 19 65 577 40 546 2.59e-48 177
MS.gene050962.t1 MTR_2g011810 33.832 334 204 7 64 385 55 383 3.38e-48 178
MS.gene050962.t1 MTR_8g104490 37.821 312 177 10 82 387 14 314 6.47e-48 173
MS.gene050962.t1 MTR_4g128600 33.433 335 204 8 64 385 52 380 7.93e-48 177
MS.gene050962.t1 MTR_6g083320 38.340 253 142 5 61 300 48 299 2.51e-42 157
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050962.t1 AT5G26920 39.403 335 180 8 61 386 41 361 2.48e-65 219
MS.gene050962.t1 AT5G26920 34.222 450 244 14 61 493 41 455 1.20e-64 221
MS.gene050962.t1 AT5G26920 33.630 449 240 14 61 493 41 447 1.18e-61 213
MS.gene050962.t1 AT5G57580 36.391 338 194 8 64 386 50 381 2.63e-56 201
MS.gene050962.t1 AT4G25800 36.202 337 196 8 64 386 39 370 3.58e-55 197
MS.gene050962.t1 AT4G25800 36.202 337 196 8 64 386 39 370 3.58e-55 197
MS.gene050962.t1 AT2G24300 35.821 335 197 8 65 386 47 376 3.20e-51 186
MS.gene050962.t1 AT2G24300 35.821 335 197 8 65 386 51 380 3.91e-51 186
MS.gene050962.t1 AT4G31000 29.887 532 323 19 64 571 50 555 5.82e-49 179
MS.gene050962.t1 AT2G24300 37.288 295 175 7 97 386 40 329 2.58e-48 177
MS.gene050962.t1 AT2G18750 33.731 335 201 9 64 385 56 382 3.27e-47 175
MS.gene050962.t1 AT2G18750 33.731 335 201 9 64 385 56 382 3.27e-47 175
MS.gene050962.t1 AT2G18750 33.731 335 201 9 64 385 56 382 3.27e-47 175
MS.gene050962.t1 AT5G62570 36.012 336 194 11 64 387 31 357 7.94e-47 171
MS.gene050962.t1 AT5G62570 35.135 333 195 11 37 355 17 342 8.36e-47 169
MS.gene050962.t1 AT5G62570 33.973 365 218 12 37 387 17 372 8.66e-47 172
MS.gene050962.t1 AT1G73805 34.921 315 185 9 64 368 49 353 1.16e-43 162
MS.gene050962.t1 AT5G62570 37.319 276 156 8 37 300 17 287 6.41e-41 150
MS.gene050962.t1 AT4G31000 28.717 491 292 18 97 571 86 534 2.11e-37 146

Find 115 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGAAAATTACAACTTATA+TGG 0.249341 7.1:+3901280 MS.gene050962:CDS
TGTCTTTAATGCAATTTATA+AGG 0.254202 7.1:+3899917 MS.gene050962:CDS
AAACAAGTTTGCATTCTTCT+TGG 0.267253 7.1:-3901449 None:intergenic
TCAAATGGGTCATATCAATA+AGG 0.269623 7.1:+3901413 MS.gene050962:CDS
CGAACATCCAGGACCTTAAA+AGG 0.293535 7.1:-3899357 None:intergenic
GCTTTGGGAAAATAGAAAAT+AGG 0.294223 7.1:+3899780 MS.gene050962:intron
CTCTCTTAATGAAGCTTCAT+TGG 0.301175 7.1:-3899642 None:intergenic
CTAGAAAGTCAGACTGTTGC+AGG 0.314296 7.1:-3900316 None:intergenic
AAAACACATACGGAAATAAA+AGG 0.316297 7.1:-3897166 None:intergenic
AAGAGACATACCTTGGGTTT+AGG 0.317099 7.1:-3897500 None:intergenic
CACCATATAGGACACATAAT+TGG 0.319161 7.1:-3899092 None:intergenic
CCAAGTGTTGTTGTATCAAT+TGG 0.338990 7.1:-3900236 None:intergenic
ATCCAATTATGTGTCCTATA+TGG 0.346907 7.1:+3899090 MS.gene050962:CDS
ACCTCCCTCAGCTTTGATCC+TGG 0.359913 7.1:-3898992 None:intergenic
CGTGGTATTTCTCTTATGTC+TGG 0.364419 7.1:-3901130 None:intergenic
ATTCAATTGGAGTGTGCATT+CGG 0.364879 7.1:+3899319 MS.gene050962:CDS
TAATATCCTCAATTCCTCTA+TGG 0.371453 7.1:+3901336 MS.gene050962:CDS
TTAAAGACAAGGAACGATAT+TGG 0.379176 7.1:-3899903 None:intergenic
ACGCTTATGTCCAACACATT+TGG 0.388946 7.1:+3898910 MS.gene050962:CDS
ATAGTTCAATCAAATTCAAT+TGG 0.395077 7.1:+3899306 MS.gene050962:CDS
GCAAGATTGCAAGGAATTCA+TGG 0.398753 7.1:+3899802 MS.gene050962:CDS
GACTTTGTGAAAATTCTGTT+TGG 0.402548 7.1:-3898970 None:intergenic
AGGTTGGGATTGCTATCAAA+TGG 0.410010 7.1:+3901398 MS.gene050962:CDS
TACATTGATGGGGATGGTTA+TGG 0.410884 7.1:+3901178 MS.gene050962:CDS
GGAACCCTTACTTCGAAAAC+TGG 0.411784 7.1:+3897303 MS.gene050962:CDS
TTCAATTGGAGTGTGCATTC+GGG 0.412066 7.1:+3899320 MS.gene050962:CDS
GACACATAATTGGATCTTCA+TGG 0.423184 7.1:-3899082 None:intergenic
CAAATGGGTCATATCAATAA+GGG 0.429109 7.1:+3901414 MS.gene050962:CDS
CCAATTGATACAACAACACT+TGG 0.429867 7.1:+3900236 MS.gene050962:CDS
AGGGAAGAAACGGTCAATTT+CGG 0.433035 7.1:+3899271 MS.gene050962:CDS
CGCTTAGTACTGCTGGTTGA+AGG 0.436286 7.1:-3897092 None:intergenic
GTCCTGGATGTTCGAGGAAA+GGG 0.442948 7.1:+3899366 MS.gene050962:CDS
ATTTCTCTTATGTCTGGCAC+TGG 0.445144 7.1:-3901124 None:intergenic
TCATGGAATACAAACTGTTA+AGG 0.451447 7.1:+3899598 MS.gene050962:CDS
GAATAGCCACCTTCTACAAC+TGG 0.452656 7.1:-3901211 None:intergenic
CTCTACTTCATATGTTAATG+AGG 0.454792 7.1:+3901072 MS.gene050962:CDS
GAATTCATTACACTAAGAAA+TGG 0.459824 7.1:+3899204 MS.gene050962:CDS
ATCTCTAAACCAGCAAGAAA+AGG 0.460286 7.1:+3899986 MS.gene050962:CDS
GAACCGAGAAGAACAACAAA+AGG 0.470127 7.1:+3897133 MS.gene050962:CDS
TGATACAACAACACTTGGAT+TGG 0.474933 7.1:+3900241 MS.gene050962:CDS
GCTCCGACATGATTGTTTCG+TGG 0.476312 7.1:-3901148 None:intergenic
TAATGCAATTTATAAGGTTG+TGG 0.483276 7.1:+3899923 MS.gene050962:CDS
AAGTAAGGGTTCCAAGCAAA+AGG 0.485530 7.1:-3897293 None:intergenic
GACAAGCAGTTGGCCTCTCA+TGG 0.486364 7.1:+3899581 MS.gene050962:CDS
AAAGCAGTGTGGTGTAAGGT+TGG 0.498718 7.1:+3901382 MS.gene050962:CDS
AAGCGAATAAAACAACATCA+TGG 0.498950 7.1:+3897110 MS.gene050962:CDS
ATGAGGTATGGCGTCTGAAA+GGG 0.499358 7.1:+3899537 MS.gene050962:CDS
GAGCTGAAATGTACATTGAT+GGG 0.500184 7.1:+3901167 MS.gene050962:CDS
ATCAAAAGCAGTGTGGTGTA+AGG 0.502186 7.1:+3901378 MS.gene050962:CDS
GAAACGGTCAATTTCGGCTA+GGG 0.507035 7.1:+3899277 MS.gene050962:CDS
TTTAAGGTCCTGGATGTTCG+AGG 0.509003 7.1:+3899360 MS.gene050962:CDS
TTCATATGTTAATGAGGGAA+TGG 0.510467 7.1:+3901078 MS.gene050962:CDS
GATATATCAAAGGGAAGAAA+CGG 0.511181 7.1:+3899261 MS.gene050962:CDS
GCACTGGATCAACATAGATC+TGG 0.511948 7.1:-3901108 None:intergenic
CTTACAAACATTTCAATGAT+CGG 0.513255 7.1:+3900204 MS.gene050962:CDS
TCAAATTGCACCTCCAAGAG+AGG 0.517774 7.1:+3899155 MS.gene050962:CDS
AAGCAGTGTGGTGTAAGGTT+GGG 0.517845 7.1:+3901383 MS.gene050962:CDS
GGAGCTGAAATGTACATTGA+TGG 0.523170 7.1:+3901166 MS.gene050962:CDS
AGAAAATAGGCAAGATTGCA+AGG 0.529169 7.1:+3899793 MS.gene050962:intron
GGAAAAGAAGAACTGTTGAA+AGG 0.529919 7.1:+3899177 MS.gene050962:CDS
GATGAGGTATGGCGTCTGAA+AGG 0.532114 7.1:+3899536 MS.gene050962:CDS
GACTTTCTAGTTTGTCAGCA+AGG 0.534248 7.1:+3900329 MS.gene050962:CDS
TACCCTTTCCTCGAACATCC+AGG 0.537589 7.1:-3899368 None:intergenic
ATATATCCATAGAGGAATTG+AGG 0.540392 7.1:-3901342 None:intergenic
AACAGTTTGTATTCCATGAG+AGG 0.541937 7.1:-3899594 None:intergenic
GAGTTTACAGATATATCAAA+GGG 0.542863 7.1:+3899252 MS.gene050962:CDS
GGTTGGGATTGCTATCAAAT+GGG 0.547074 7.1:+3901399 MS.gene050962:CDS
AAATCAGCAACGCGTAGTCA+TGG 0.550182 7.1:+3899047 MS.gene050962:CDS
CATACGGAAATAAAAGGTGT+TGG 0.554012 7.1:-3897160 None:intergenic
TGAGTTTACAGATATATCAA+AGG 0.556394 7.1:+3899251 MS.gene050962:CDS
TGCAATTTATAAGGTTGTGG+AGG 0.556418 7.1:+3899926 MS.gene050962:CDS
TCTACTTCATATGTTAATGA+GGG 0.557125 7.1:+3901073 MS.gene050962:CDS
GGCTCGCATGTTGCATACAT+AGG 0.557498 7.1:-3901259 None:intergenic
CATCGTTGAATGATGAGGTA+TGG 0.559097 7.1:+3899525 MS.gene050962:CDS
CATACCTTGGGTTTAGGTGG+CGG 0.565063 7.1:-3897494 None:intergenic
GTTGTTGTATCAATTGGCAA+TGG 0.566856 7.1:-3900230 None:intergenic
TCACGCAGTTCAATTTGAAG+TGG 0.568198 7.1:-3899018 None:intergenic
AGACATACCTTGGGTTTAGG+TGG 0.570711 7.1:-3897497 None:intergenic
AGGAATTGAGGATATTAACA+TGG 0.571805 7.1:-3901330 None:intergenic
AGCGAATAAAACAACATCAT+GGG 0.573517 7.1:+3897111 MS.gene050962:CDS
GGTCCTGGATGTTCGAGGAA+AGG 0.575080 7.1:+3899365 MS.gene050962:CDS
CAAATTGCACCTCCAAGAGA+GGG 0.582196 7.1:+3899156 MS.gene050962:CDS
ACTGCTTGATATATCCATAG+AGG 0.587495 7.1:-3901350 None:intergenic
CAACGCGTAGTCATGGAAGA+AGG 0.592392 7.1:+3899054 MS.gene050962:CDS
GTGTCATTGACAGCGCTTGG+TGG 0.595299 7.1:+3900163 MS.gene050962:intron
ACGTCTCCTTCCAAATGTGT+TGG 0.598433 7.1:-3898920 None:intergenic
TGTAGAAGGTGGCTATTCGA+TGG 0.598654 7.1:+3901216 MS.gene050962:CDS
AAACGGTCAATTTCGGCTAG+GGG 0.604248 7.1:+3899278 MS.gene050962:CDS
CAATGAAGCTTCATTAAGAG+AGG 0.604707 7.1:+3899643 MS.gene050962:CDS
GTTCCTCAACCAGATACAAG+AGG 0.606042 7.1:+3897464 MS.gene050962:intron
AGAAACGGTCAATTTCGGCT+AGG 0.609606 7.1:+3899276 MS.gene050962:CDS
ATTGGAGTGTGCATTCGGGA+AGG 0.610490 7.1:+3899324 MS.gene050962:CDS
AAGTCCAGGATCAAAGCTGA+GGG 0.620476 7.1:+3898988 MS.gene050962:CDS
TTATGTCCAACACATTTGGA+AGG 0.624378 7.1:+3898914 MS.gene050962:CDS
TATAAATTGCATTAAAGACA+AGG 0.627430 7.1:-3899914 None:intergenic
AAAGTCCAGGATCAAAGCTG+AGG 0.634583 7.1:+3898987 MS.gene050962:CDS
CAAGCAAAAGGCGAATGCAG+TGG 0.634985 7.1:-3897281 None:intergenic
TGGTAAACTTGACAAGCAGT+TGG 0.637384 7.1:+3899571 MS.gene050962:CDS
TAGTCGTAGTTGTGATGACA+AGG 0.637677 7.1:+3897058 MS.gene050962:CDS
CAACAACACTTGGATTGGCG+CGG 0.641298 7.1:+3900246 MS.gene050962:CDS
TAGAAAGTCAGACTGTTGCA+GGG 0.643701 7.1:-3900315 None:intergenic
ACATATGAAGTAGAGATACA+TGG 0.644934 7.1:-3901064 None:intergenic
AAAAGAGGATTGGACAGCTG+AGG 0.645437 7.1:+3899122 MS.gene050962:CDS
TCGTCCATCGTTGAATGATG+AGG 0.648172 7.1:+3899520 MS.gene050962:CDS
GTACAAAATGCACAATATGA+CGG 0.648816 7.1:+3900281 MS.gene050962:CDS
TTCACCGCCACCTAAACCCA+AGG 0.650298 7.1:+3897490 MS.gene050962:CDS
TCCAGGATCAAAGCTGAGGG+AGG 0.652637 7.1:+3898991 MS.gene050962:CDS
GGAATTGAGGATATTAACAT+GGG 0.655798 7.1:-3901329 None:intergenic
ATTATTAGATGGCATCGAAG+AGG 0.671982 7.1:+3897015 None:intergenic
AGCTGAAATGTACATTGATG+GGG 0.679345 7.1:+3901168 MS.gene050962:CDS
ATACCACGAAACAATCATGT+CGG 0.699277 7.1:+3901145 MS.gene050962:CDS
GTGATAAATCAAAAGCAGTG+TGG 0.718101 7.1:+3901371 MS.gene050962:CDS
GAAATGTACATTGATGGGGA+TGG 0.735643 7.1:+3901172 MS.gene050962:CDS
ACATAATTGGATCTTCATGG+AGG 0.751325 7.1:-3899079 None:intergenic
CATACCTCATCATTCAACGA+TGG 0.753671 7.1:-3899524 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATAAAACACATA+CGG - chr7.1:3897179-3897198 None:intergenic 10.0%
!! ATACTATTACTAATTAATAA+TGG + chr7.1:3897401-3897420 MS.gene050962:intron 10.0%
!! GATTAAAAAATTATGTAATT+AGG - chr7.1:3898120-3898139 None:intergenic 10.0%
!!! AATTTTCTTATTATAAATGT+TGG - chr7.1:3897623-3897642 None:intergenic 10.0%
!!! ATGTAATAATATTGATTTAT+TGG - chr7.1:3900838-3900857 None:intergenic 10.0%
!!! ATTTTCTTATTATAAATGTT+GGG - chr7.1:3897622-3897641 None:intergenic 10.0%
!! CGAATTATAATTTAATATGA+AGG + chr7.1:3898581-3898600 MS.gene050962:intron 15.0%
!! TAAATTTAAGAATCCATATA+AGG - chr7.1:3900076-3900095 None:intergenic 15.0%
!! TAGTAATTAGCTATTAAAAT+AGG + chr7.1:3899414-3899433 MS.gene050962:intron 15.0%
!!! AACTAAATAAAGAAGTATTA+GGG - chr7.1:3899720-3899739 None:intergenic 15.0%
!!! AATGAATTTGATTTTGAAAA+TGG + chr7.1:3898192-3898211 MS.gene050962:intron 15.0%
!!! ATATTTTGAAATATTATGTG+TGG + chr7.1:3899673-3899692 MS.gene050962:intron 15.0%
!!! ATGGATTATAATAATTTAAG+AGG + chr7.1:3898519-3898538 MS.gene050962:intron 15.0%
!!! CAACAATTTTCTTATAATAA+TGG + chr7.1:3898500-3898519 MS.gene050962:intron 15.0%
!!! TAATGTTGTATATGATTTTT+TGG + chr7.1:3899758-3899777 MS.gene050962:intron 15.0%
!!! TATTGATATTTGTTTTTGTT+TGG + chr7.1:3898870-3898889 MS.gene050962:intron 15.0%
!! ATAGTTCAATCAAATTCAAT+TGG + chr7.1:3899306-3899325 MS.gene050962:CDS 20.0%
!! CTTCATGTATTTAAATATGA+GGG - chr7.1:3900741-3900760 None:intergenic 20.0%
!! GAAATTGAGTTTATATCTTT+CGG - chr7.1:3898810-3898829 None:intergenic 20.0%
!! GAATTTGGATTTACAAATTT+GGG - chr7.1:3898071-3898090 None:intergenic 20.0%
!! TAGTAATAGTATATACTACA+TGG - chr7.1:3897393-3897412 None:intergenic 20.0%
!! TATAAATTGCATTAAAGACA+AGG - chr7.1:3899917-3899936 None:intergenic 20.0%
!! TCTTCATGTATTTAAATATG+AGG - chr7.1:3900742-3900761 None:intergenic 20.0%
!! TGAATTTGGATTTACAAATT+TGG - chr7.1:3898072-3898091 None:intergenic 20.0%
!! TGTCTTTAATGCAATTTATA+AGG + chr7.1:3899917-3899936 MS.gene050962:CDS 20.0%
!!! ATATTGATTTATTGGTTTTC+TGG - chr7.1:3900830-3900849 None:intergenic 20.0%
!!! ATCTGAATTTGATTTTGAAA+TGG + chr7.1:3898137-3898156 MS.gene050962:intron 20.0%
!!! CAACTAAATAAAGAAGTATT+AGG - chr7.1:3899721-3899740 None:intergenic 20.0%
!!! TACTATACACAACTATATTT+TGG - chr7.1:3900114-3900133 None:intergenic 20.0%
! AAAACACATACGGAAATAAA+AGG - chr7.1:3897169-3897188 None:intergenic 25.0%
! AATTCAAACCTCTTAATGAA+TGG - chr7.1:3897554-3897573 None:intergenic 25.0%
! ACAATATCAACAATATTCCT+CGG - chr7.1:3897774-3897793 None:intergenic 25.0%
! ACAATATTGTTTCATCATGT+TGG + chr7.1:3897833-3897852 MS.gene050962:intron 25.0%
! AGAAAGAAAGGAACATTTAA+AGG - chr7.1:3897208-3897227 None:intergenic 25.0%
! AGACAAATATTGTGAAATGT+AGG + chr7.1:3900605-3900624 MS.gene050962:intron 25.0%
! AGCTAATTACTAACATTTGT+CGG - chr7.1:3899406-3899425 None:intergenic 25.0%
! ATAAATCTTGTGTTGAAAAG+TGG + chr7.1:3898636-3898655 MS.gene050962:intron 25.0%
! ATCTACCAACATTATGATAT+AGG - chr7.1:3900025-3900044 None:intergenic 25.0%
! CAAATACTAGTAAGAAAGAA+AGG - chr7.1:3897220-3897239 None:intergenic 25.0%
! CCAGAAAATTACAACTTATA+TGG + chr7.1:3901280-3901299 MS.gene050962:CDS 25.0%
! CTTACAAACATTTCAATGAT+CGG + chr7.1:3900204-3900223 MS.gene050962:CDS 25.0%
! GAATTCATTACACTAAGAAA+TGG + chr7.1:3899204-3899223 MS.gene050962:CDS 25.0%
! GAGTTTACAGATATATCAAA+GGG + chr7.1:3899252-3899271 MS.gene050962:CDS 25.0%
! TAATGCAATTTATAAGGTTG+TGG + chr7.1:3899923-3899942 MS.gene050962:CDS 25.0%
! TCCAAGATAAAACATAGATT+TGG + chr7.1:3900765-3900784 MS.gene050962:intron 25.0%
! TCTACTTCATATGTTAATGA+GGG + chr7.1:3901073-3901092 MS.gene050962:CDS 25.0%
! TGAAAAAATTTCTGATTCCT+CGG + chr7.1:3898355-3898374 MS.gene050962:intron 25.0%
! TGAGTTTACAGATATATCAA+AGG + chr7.1:3899251-3899270 MS.gene050962:CDS 25.0%
!! ACCAAATCTATGTTTTATCT+TGG - chr7.1:3900769-3900788 None:intergenic 25.0%
!! ATATTCTGCATAAAACCTTT+TGG + chr7.1:3900377-3900396 MS.gene050962:intron 25.0%
!! CCATATAAGTTGTAATTTTC+TGG - chr7.1:3901283-3901302 None:intergenic 25.0%
!!! ATTTAATATGAAGGAGTGTT+AGG + chr7.1:3898590-3898609 MS.gene050962:intron 25.0%
!!! CTAGTAAAAGAAGCATTTAA+CGG - chr7.1:3900530-3900549 None:intergenic 25.0%
!!! CTTTACTTTTACTTGAACAA+CGG - chr7.1:3898771-3898790 None:intergenic 25.0%
!!! GTATATGATTTTTTGGCTTT+GGG + chr7.1:3899765-3899784 MS.gene050962:intron 25.0%
!!! GTTGAAGACAATTGATTTTT+TGG - chr7.1:3898007-3898026 None:intergenic 25.0%
!!! TGTATATGATTTTTTGGCTT+TGG + chr7.1:3899764-3899783 MS.gene050962:intron 25.0%
!!! TTTTGTTTGGAATTTAGTTG+TGG + chr7.1:3898883-3898902 MS.gene050962:intron 25.0%
AAACAAGTTTGCATTCTTCT+TGG - chr7.1:3901452-3901471 None:intergenic 30.0%
AAGCGAATAAAACAACATCA+TGG + chr7.1:3897110-3897129 MS.gene050962:CDS 30.0%
AATTGTTGACACATTAGAGA+AGG - chr7.1:3898488-3898507 None:intergenic 30.0%
ACATATGAAGTAGAGATACA+TGG - chr7.1:3901067-3901086 None:intergenic 30.0%
AGCGAATAAAACAACATCAT+GGG + chr7.1:3897111-3897130 MS.gene050962:CDS 30.0%
AGGAATTGAGGATATTAACA+TGG - chr7.1:3901333-3901352 None:intergenic 30.0%
ATATATCCATAGAGGAATTG+AGG - chr7.1:3901345-3901364 None:intergenic 30.0%
ATATCCTAATTCTATCTGTC+TGG + chr7.1:3900503-3900522 MS.gene050962:intron 30.0%
ATATTGTGAAATGTAGGCTA+AGG + chr7.1:3900611-3900630 MS.gene050962:intron 30.0%
ATCCAATTATGTGTCCTATA+TGG + chr7.1:3899090-3899109 MS.gene050962:CDS 30.0%
CAAATGGGTCATATCAATAA+GGG + chr7.1:3901414-3901433 MS.gene050962:CDS 30.0%
CGTTGTTCAAGTAAAAGTAA+AGG + chr7.1:3898769-3898788 MS.gene050962:intron 30.0%
CTCTACTTCATATGTTAATG+AGG + chr7.1:3901072-3901091 MS.gene050962:CDS 30.0%
CTGAAAACTAGTAATAATCC+TGG + chr7.1:3900705-3900724 MS.gene050962:intron 30.0%
GACTTTGTGAAAATTCTGTT+TGG - chr7.1:3898973-3898992 None:intergenic 30.0%
GAGTTAGTAGTATCAAAGTT+TGG - chr7.1:3897430-3897449 None:intergenic 30.0%
GATATATCAAAGGGAAGAAA+CGG + chr7.1:3899261-3899280 MS.gene050962:CDS 30.0%
GCTACATTTCACTATAACTT+CGG - chr7.1:3900661-3900680 None:intergenic 30.0%
GGAATTGAGGATATTAACAT+GGG - chr7.1:3901332-3901351 None:intergenic 30.0%
GTACAAAATGCACAATATGA+CGG + chr7.1:3900281-3900300 MS.gene050962:CDS 30.0%
GTACAGGTCAAAAAGAAATT+GGG + chr7.1:3901026-3901045 MS.gene050962:intron 30.0%
TAAAGGGGAATATAGTAAGA+GGG - chr7.1:3897351-3897370 None:intergenic 30.0%
TAATATCCTCAATTCCTCTA+TGG + chr7.1:3901336-3901355 MS.gene050962:CDS 30.0%
TAATTACTAACATTTGTCGG+AGG - chr7.1:3899403-3899422 None:intergenic 30.0%
TAGTATATACTACATGGTGA+TGG - chr7.1:3897387-3897406 None:intergenic 30.0%
TCAAATGGGTCATATCAATA+AGG + chr7.1:3901413-3901432 MS.gene050962:CDS 30.0%
TCATGGAATACAAACTGTTA+AGG + chr7.1:3899598-3899617 MS.gene050962:CDS 30.0%
TGCATCCTATATCATAATGT+TGG + chr7.1:3900017-3900036 MS.gene050962:intron 30.0%
TGTACAGGTCAAAAAGAAAT+TGG + chr7.1:3901025-3901044 MS.gene050962:intron 30.0%
TTAAAGACAAGGAACGATAT+TGG - chr7.1:3899906-3899925 None:intergenic 30.0%
TTCATATGTTAATGAGGGAA+TGG + chr7.1:3901078-3901097 MS.gene050962:CDS 30.0%
! ATATGGTGACTTTGAAAAAG+AGG + chr7.1:3899107-3899126 MS.gene050962:CDS 30.0%
! GAAAAAGTCTCAAGTTGTAT+AGG + chr7.1:3900415-3900434 MS.gene050962:intron 30.0%
!! ATCTGAAATTGATTTTGAGG+TGG + chr7.1:3898160-3898179 MS.gene050962:intron 30.0%
!! GCTTTGGGAAAATAGAAAAT+AGG + chr7.1:3899780-3899799 MS.gene050962:intron 30.0%
!! GTTTTCAGGACAAATAGAAA+AGG - chr7.1:3900693-3900712 None:intergenic 30.0%
!! TGGATCTGAAATTGATTTTG+AGG + chr7.1:3898157-3898176 MS.gene050962:intron 30.0%
!!! AGTTTTGAAATGCATCCAAA+AGG - chr7.1:3900395-3900414 None:intergenic 30.0%
!!! CAGGATTATTACTAGTTTTC+AGG - chr7.1:3900707-3900726 None:intergenic 30.0%
!!! CTTTTTCAAAGTCACCATAT+AGG - chr7.1:3899107-3899126 None:intergenic 30.0%
!!! GAAGAAATGTTTTGTTTGTG+AGG + chr7.1:3898290-3898309 MS.gene050962:intron 30.0%
!!! TCTGAAATTGATTTTGAGGT+GGG + chr7.1:3898161-3898180 MS.gene050962:intron 30.0%
AAACCTCTTAATGAATGGAC+TGG - chr7.1:3897549-3897568 None:intergenic 35.0%
AAACTTGACAAACCTTTCTG+TGG + chr7.1:3900878-3900897 MS.gene050962:intron 35.0%
AAATTTGGGTATGCGAATCT+CGG - chr7.1:3898057-3898076 None:intergenic 35.0%
AACAGTTTGTATTCCATGAG+AGG - chr7.1:3899597-3899616 None:intergenic 35.0%
AACATTAAACTCCAACACAC+AGG + chr7.1:3897893-3897912 MS.gene050962:intron 35.0%
ACAGAAAGGTTTGTCAAGTT+TGG - chr7.1:3900879-3900898 None:intergenic 35.0%
ACATAATTGGATCTTCATGG+AGG - chr7.1:3899082-3899101 None:intergenic 35.0%
ACATTAAACTCCAACACACA+GGG + chr7.1:3897894-3897913 MS.gene050962:intron 35.0%
ACTGCTTGATATATCCATAG+AGG - chr7.1:3901353-3901372 None:intergenic 35.0%
AGAAAATAGGCAAGATTGCA+AGG + chr7.1:3899793-3899812 MS.gene050962:intron 35.0%
AGCTGAAATGTACATTGATG+GGG + chr7.1:3901168-3901187 MS.gene050962:CDS 35.0%
AGGATTAAAGAGACATACCT+TGG - chr7.1:3897510-3897529 None:intergenic 35.0%
ATAAATGTTGGGAGTAGACA+AGG - chr7.1:3897611-3897630 None:intergenic 35.0%
ATACCACGAAACAATCATGT+CGG + chr7.1:3901145-3901164 MS.gene050962:CDS 35.0%
ATCTCTAAACCAGCAAGAAA+AGG + chr7.1:3899986-3900005 MS.gene050962:CDS 35.0%
ATTCAATTGGAGTGTGCATT+CGG + chr7.1:3899319-3899338 MS.gene050962:CDS 35.0%
CAATGAAGCTTCATTAAGAG+AGG + chr7.1:3899643-3899662 MS.gene050962:CDS 35.0%
CACCATATAGGACACATAAT+TGG - chr7.1:3899095-3899114 None:intergenic 35.0%
CCAATTGATACAACAACACT+TGG + chr7.1:3900236-3900255 MS.gene050962:CDS 35.0%
CTAAAGGGGAATATAGTAAG+AGG - chr7.1:3897352-3897371 None:intergenic 35.0%
CTCTCTTAATGAAGCTTCAT+TGG - chr7.1:3899645-3899664 None:intergenic 35.0%
CTGAAAGGGATACGTAAAAA+TGG + chr7.1:3899551-3899570 MS.gene050962:CDS 35.0%
CTGGAAACATTTGACAAAGA+AGG - chr7.1:3897530-3897549 None:intergenic 35.0%
GAATATAGTAAGAGGGTGAA+TGG - chr7.1:3897344-3897363 None:intergenic 35.0%
GACACATAATTGGATCTTCA+TGG - chr7.1:3899085-3899104 None:intergenic 35.0%
GAGCTGAAATGTACATTGAT+GGG + chr7.1:3901167-3901186 MS.gene050962:CDS 35.0%
GGAAAAGAAGAACTGTTGAA+AGG + chr7.1:3899177-3899196 MS.gene050962:CDS 35.0%
GGATTAAAGAGACATACCTT+GGG - chr7.1:3897509-3897528 None:intergenic 35.0%
GTGATAAATCAAAAGCAGTG+TGG + chr7.1:3901371-3901390 MS.gene050962:CDS 35.0%
GTTGTTGTATCAATTGGCAA+TGG - chr7.1:3900233-3900252 None:intergenic 35.0%
TAAATGTTGGGAGTAGACAA+GGG - chr7.1:3897610-3897629 None:intergenic 35.0%
TAATTAGGGTGAACGAATCT+AGG - chr7.1:3898105-3898124 None:intergenic 35.0%
TATTCAGAGTGGACCTTATA+TGG + chr7.1:3900060-3900079 MS.gene050962:intron 35.0%
TCTGAATATTCACAGCCAAA+GGG - chr7.1:3900048-3900067 None:intergenic 35.0%
TGATACAACAACACTTGGAT+TGG + chr7.1:3900241-3900260 MS.gene050962:CDS 35.0%
TGCAAGACAAAATGTTAGTC+TGG - chr7.1:3900558-3900577 None:intergenic 35.0%
TGCAATTTATAAGGTTGTGG+AGG + chr7.1:3899926-3899945 MS.gene050962:CDS 35.0%
TGTTTCATCATGTTGGAAAG+TGG + chr7.1:3897840-3897859 MS.gene050962:intron 35.0%
TTATGTCCAACACATTTGGA+AGG + chr7.1:3898914-3898933 MS.gene050962:CDS 35.0%
TTCACACATTAGAGAAGACT+GGG + chr7.1:3897647-3897666 MS.gene050962:intron 35.0%
TTTCCAGTCCATTCATTAAG+AGG + chr7.1:3897543-3897562 MS.gene050962:intron 35.0%
! AAACACAAACCTTTTCTTGC+TGG - chr7.1:3899998-3900017 None:intergenic 35.0%
! ACAGAATTTTCACAAAGTCC+AGG + chr7.1:3898974-3898993 MS.gene050962:CDS 35.0%
! ACTGCGGATTTATGGATTTT+GGG + chr7.1:3898266-3898285 MS.gene050962:intron 35.0%
! ACTTTTACTTGAACAACGGT+TGG - chr7.1:3898767-3898786 None:intergenic 35.0%
! ATAATGTTGGTAGATCCCTT+TGG + chr7.1:3900030-3900049 MS.gene050962:intron 35.0%
! CATACGGAAATAAAAGGTGT+TGG - chr7.1:3897163-3897182 None:intergenic 35.0%
! CCAAGTGTTGTTGTATCAAT+TGG - chr7.1:3900239-3900258 None:intergenic 35.0%
! GTGACTTTGAAAAAGAGGAT+TGG + chr7.1:3899112-3899131 MS.gene050962:CDS 35.0%
! TCACATTTTCCAGTTGTAGA+AGG + chr7.1:3901202-3901221 MS.gene050962:CDS 35.0%
! TGATTGCAGATTGCATTTTG+CGG + chr7.1:3898228-3898247 MS.gene050962:intron 35.0%
! TTTTATTCGCTTAGTACTGC+TGG - chr7.1:3897102-3897121 None:intergenic 35.0%
! TTTTTCTGACTGCGGATTTA+TGG + chr7.1:3898258-3898277 MS.gene050962:intron 35.0%
!! GGTGAAATTTTGTTGTGTCA+TGG + chr7.1:3900786-3900805 MS.gene050962:intron 35.0%
!!! TCTCCTTTTGTTGTTCTTCT+CGG - chr7.1:3897139-3897158 None:intergenic 35.0%
AAGAGACATACCTTGGGTTT+AGG - chr7.1:3897503-3897522 None:intergenic 40.0%
AAGTAAGGGTTCCAAGCAAA+AGG - chr7.1:3897296-3897315 None:intergenic 40.0%
ACGCTTATGTCCAACACATT+TGG + chr7.1:3898910-3898929 MS.gene050962:CDS 40.0%
AGGGAAGAAACGGTCAATTT+CGG + chr7.1:3899271-3899290 MS.gene050962:CDS 40.0%
AGGTTGGGATTGCTATCAAA+TGG + chr7.1:3901398-3901417 MS.gene050962:CDS 40.0%
ATCAAAAGCAGTGTGGTGTA+AGG + chr7.1:3901378-3901397 MS.gene050962:CDS 40.0%
ATGGAGCAAGAAAGGTCTAA+AGG - chr7.1:3897368-3897387 None:intergenic 40.0%
ATTTCTCTTATGTCTGGCAC+TGG - chr7.1:3901127-3901146 None:intergenic 40.0%
CATACCTCATCATTCAACGA+TGG - chr7.1:3899527-3899546 None:intergenic 40.0%
CATCGTTGAATGATGAGGTA+TGG + chr7.1:3899525-3899544 MS.gene050962:CDS 40.0%
CGTGGTATTTCTCTTATGTC+TGG - chr7.1:3901133-3901152 None:intergenic 40.0%
CTCTGAATATTCACAGCCAA+AGG - chr7.1:3900049-3900068 None:intergenic 40.0%
CTGCCGAGGAATTAAAAATC+CGG - chr7.1:3898420-3898439 None:intergenic 40.0%
GAAATGTACATTGATGGGGA+TGG + chr7.1:3901172-3901191 MS.gene050962:CDS 40.0%
GAACCGAGAAGAACAACAAA+AGG + chr7.1:3897133-3897152 MS.gene050962:CDS 40.0%
GAATCTCGGTGAACGAATTT+GGG - chr7.1:3898043-3898062 None:intergenic 40.0%
GCAAGATTGCAAGGAATTCA+TGG + chr7.1:3899802-3899821 MS.gene050962:CDS 40.0%
GGAGCTGAAATGTACATTGA+TGG + chr7.1:3901166-3901185 MS.gene050962:CDS 40.0%
GGTTGGGATTGCTATCAAAT+GGG + chr7.1:3901399-3901418 MS.gene050962:CDS 40.0%
GTTCACACATTAGAGAAGAC+TGG + chr7.1:3897646-3897665 MS.gene050962:intron 40.0%
TAATGAAGTTCCCTGTGTGT+TGG - chr7.1:3897907-3897926 None:intergenic 40.0%
TACATTGATGGGGATGGTTA+TGG + chr7.1:3901178-3901197 MS.gene050962:CDS 40.0%
TAGAAAGTCAGACTGTTGCA+GGG - chr7.1:3900318-3900337 None:intergenic 40.0%
TAGTCGTAGTTGTGATGACA+AGG + chr7.1:3897058-3897077 MS.gene050962:CDS 40.0%
TCACGCAGTTCAATTTGAAG+TGG - chr7.1:3899021-3899040 None:intergenic 40.0%
TGGAGCAAGAAAGGTCTAAA+GGG - chr7.1:3897367-3897386 None:intergenic 40.0%
TGGTAAACTTGACAAGCAGT+TGG + chr7.1:3899571-3899590 MS.gene050962:CDS 40.0%
TTAACTACCGAGGATTTCCT+CGG + chr7.1:3898381-3898400 MS.gene050962:intron 40.0%
TTAACTACCGAGGATTTCCT+CGG - chr7.1:3898400-3898381 None:intergenic 40.0%
TTACTTGAACAACGGTTGGT+TGG - chr7.1:3898763-3898782 None:intergenic 40.0%
TTCAATTGGAGTGTGCATTC+GGG + chr7.1:3899320-3899339 MS.gene050962:CDS 40.0%
TTGACACATTAGAGAAGGCT+GGG - chr7.1:3898483-3898502 None:intergenic 40.0%
TTGGCTGTGAATATTCAGAG+TGG + chr7.1:3900049-3900068 MS.gene050962:intron 40.0%
! AAAATACGTTTTTGCCCCCT+CGG + chr7.1:3897680-3897699 MS.gene050962:intron 40.0%
! ACCTACCAGTTTTCGAAGTA+AGG - chr7.1:3897311-3897330 None:intergenic 40.0%
! ACTGCCGAGGAATTTAAAAC+CGG + chr7.1:3897709-3897728 MS.gene050962:intron 40.0%
! AGGTAGAAGCGAACCTTTTA+AGG + chr7.1:3899344-3899363 MS.gene050962:CDS 40.0%
! AGTTCTTCTTTTCCCTCTCT+TGG - chr7.1:3899171-3899190 None:intergenic 40.0%
! CATTTTCCAGTTGTAGAAGG+TGG + chr7.1:3901205-3901224 MS.gene050962:CDS 40.0%
! CCTACCAGTTTTCGAAGTAA+GGG - chr7.1:3897310-3897329 None:intergenic 40.0%
! GACTGCGGATTTATGGATTT+TGG + chr7.1:3898265-3898284 MS.gene050962:intron 40.0%
! GTGGAGGTGACTTTTGATAA+TGG + chr7.1:3899942-3899961 MS.gene050962:CDS 40.0%
! TACTTGAACAACGGTTGGTT+GGG - chr7.1:3898762-3898781 None:intergenic 40.0%
! TAGGCATGTGATGGTGAATT+TGG - chr7.1:3898086-3898105 None:intergenic 40.0%
!! ATAGGTGTTGAGTCTTGAAG+AGG + chr7.1:3900433-3900452 MS.gene050962:intron 40.0%
!! ATGAAGGAGTGTTAGGACAA+TGG + chr7.1:3898597-3898616 MS.gene050962:intron 40.0%
!! CAGCCGGATTTTTAATTCCT+CGG + chr7.1:3898414-3898433 MS.gene050962:intron 40.0%
!! GACTTTCTAGTTTGTCAGCA+AGG + chr7.1:3900329-3900348 MS.gene050962:CDS 40.0%
!! TAGGTGTTGAGTCTTGAAGA+GGG + chr7.1:3900434-3900453 MS.gene050962:intron 40.0%
AAAAGAGGATTGGACAGCTG+AGG + chr7.1:3899122-3899141 MS.gene050962:CDS 45.0%
AAACGGTCAATTTCGGCTAG+GGG + chr7.1:3899278-3899297 MS.gene050962:CDS 45.0%
AAAGCAGTGTGGTGTAAGGT+TGG + chr7.1:3901382-3901401 MS.gene050962:CDS 45.0%
AAAGTCCAGGATCAAAGCTG+AGG + chr7.1:3898987-3899006 MS.gene050962:CDS 45.0%
AAATCAGCAACGCGTAGTCA+TGG + chr7.1:3899047-3899066 MS.gene050962:CDS 45.0%
AAGCAGTGTGGTGTAAGGTT+GGG + chr7.1:3901383-3901402 MS.gene050962:CDS 45.0%
AAGTCCAGGATCAAAGCTGA+GGG + chr7.1:3898988-3899007 MS.gene050962:CDS 45.0%
ACGTCTCCTTCCAAATGTGT+TGG - chr7.1:3898923-3898942 None:intergenic 45.0%
AGAAACGGTCAATTTCGGCT+AGG + chr7.1:3899276-3899295 MS.gene050962:CDS 45.0%
AGACATACCTTGGGTTTAGG+TGG - chr7.1:3897500-3897519 None:intergenic 45.0%
ATCATGTTGGAAAGTGGCAG+GGG + chr7.1:3897846-3897865 MS.gene050962:intron 45.0%
ATGAGGTATGGCGTCTGAAA+GGG + chr7.1:3899537-3899556 MS.gene050962:CDS 45.0%
CAAATTGCACCTCCAAGAGA+GGG + chr7.1:3899156-3899175 MS.gene050962:CDS 45.0%
CATCATGTTGGAAAGTGGCA+GGG + chr7.1:3897845-3897864 MS.gene050962:intron 45.0%
CCCTTACTTCGAAAACTGGT+AGG + chr7.1:3897307-3897326 MS.gene050962:intron 45.0%
CGAACATCCAGGACCTTAAA+AGG - chr7.1:3899360-3899379 None:intergenic 45.0%
CGAATCTCGGTGAACGAATT+TGG - chr7.1:3898044-3898063 None:intergenic 45.0%
CGGACCAGACAGATAGAATT+AGG - chr7.1:3900510-3900529 None:intergenic 45.0%
CTAGAAAGTCAGACTGTTGC+AGG - chr7.1:3900319-3900338 None:intergenic 45.0%
GAAACGGTCAATTTCGGCTA+GGG + chr7.1:3899277-3899296 MS.gene050962:CDS 45.0%
GAACGAATCTAGGCATGTGA+TGG - chr7.1:3898095-3898114 None:intergenic 45.0%
GAATAGCCACCTTCTACAAC+TGG - chr7.1:3901214-3901233 None:intergenic 45.0%
GCACTGGATCAACATAGATC+TGG - chr7.1:3901111-3901130 None:intergenic 45.0%
GGAACCCTTACTTCGAAAAC+TGG + chr7.1:3897303-3897322 MS.gene050962:CDS 45.0%
GGAGCAAGAAAGGTCTAAAG+GGG - chr7.1:3897366-3897385 None:intergenic 45.0%
GTTCCTCAACCAGATACAAG+AGG + chr7.1:3897464-3897483 MS.gene050962:intron 45.0%
GTTGACACATTAGAGAAGGC+TGG - chr7.1:3898484-3898503 None:intergenic 45.0%
GTTTAGTGACTGCCACAGAA+AGG - chr7.1:3900893-3900912 None:intergenic 45.0%
TATGAGGGATGCTATACACC+AGG - chr7.1:3900726-3900745 None:intergenic 45.0%
TCAAATTGCACCTCCAAGAG+AGG + chr7.1:3899155-3899174 MS.gene050962:CDS 45.0%
TCATCATGTTGGAAAGTGGC+AGG + chr7.1:3897844-3897863 MS.gene050962:intron 45.0%
TCGTCCATCGTTGAATGATG+AGG + chr7.1:3899520-3899539 MS.gene050962:CDS 45.0%
TGTAGAAGGTGGCTATTCGA+TGG + chr7.1:3901216-3901235 MS.gene050962:CDS 45.0%
TTAACTGCCGAGGAAATCCT+CGG + chr7.1:3897738-3897757 MS.gene050962:intron 45.0%
TTAACTGCCGAGGAAATCCT+CGG - chr7.1:3897757-3897738 None:intergenic 45.0%
TTATGAACAGTGCGAGAGAG+AGG + chr7.1:3898316-3898335 MS.gene050962:intron 45.0%
! AAAATACGCTTTTGCCCCCT+CGG - chr7.1:3898450-3898469 None:intergenic 45.0%
! TCTTCTTTTCCCTCTCTTGG+AGG - chr7.1:3899168-3899187 None:intergenic 45.0%
! TTTAAGGTCCTGGATGTTCG+AGG + chr7.1:3899360-3899379 MS.gene050962:CDS 45.0%
!! ACATGGTGATGGAGCAAGAA+AGG - chr7.1:3897376-3897395 None:intergenic 45.0%
!!! AAGCGAACCTTTTAAGGTCC+TGG + chr7.1:3899350-3899369 MS.gene050962:CDS 45.0%
!!! GACTGCGTTTTTTCTGACTG+CGG + chr7.1:3898250-3898269 MS.gene050962:intron 45.0%
!!! GCAGCCGGTTTTAAATTCCT+CGG - chr7.1:3897716-3897735 None:intergenic 45.0%
!! ATTAAAAAATTATGTAATTA+GGG - chr7.1:3898119-3898138 None:intergenic 5.0%
ATTGGAGTGTGCATTCGGGA+AGG + chr7.1:3899324-3899343 MS.gene050962:CDS 50.0%
CAACGCGTAGTCATGGAAGA+AGG + chr7.1:3899054-3899073 MS.gene050962:CDS 50.0%
CAAGCAAAAGGCGAATGCAG+TGG - chr7.1:3897284-3897303 None:intergenic 50.0%
CATACCTTGGGTTTAGGTGG+CGG - chr7.1:3897497-3897516 None:intergenic 50.0%
CGGTGAACGAATTTGGGCAT+GGG - chr7.1:3898037-3898056 None:intergenic 50.0%
GATGAGGTATGGCGTCTGAA+AGG + chr7.1:3899536-3899555 MS.gene050962:CDS 50.0%
GCTCCGACATGATTGTTTCG+TGG - chr7.1:3901151-3901170 None:intergenic 50.0%
GGCTCGCATGTTGCATACAT+AGG - chr7.1:3901262-3901281 None:intergenic 50.0%
GGTGAATCGCCTCTTGTATC+TGG - chr7.1:3897476-3897495 None:intergenic 50.0%
GTCCTGGATGTTCGAGGAAA+GGG + chr7.1:3899366-3899385 MS.gene050962:CDS 50.0%
GTTGGTTGGGTCAGACAAAC+TGG - chr7.1:3898749-3898768 None:intergenic 50.0%
TACCCTTTCCTCGAACATCC+AGG - chr7.1:3899371-3899390 None:intergenic 50.0%
TCGCCTCTTGTATCTGGTTG+AGG - chr7.1:3897470-3897489 None:intergenic 50.0%
TCGGTGAACGAATTTGGGCA+TGG - chr7.1:3898038-3898057 None:intergenic 50.0%
! CACTGCATTCGCCTTTTGCT+TGG + chr7.1:3897282-3897301 MS.gene050962:CDS 50.0%
! CGCTTAGTACTGCTGGTTGA+AGG - chr7.1:3897095-3897114 None:intergenic 50.0%
! CTTGTGTCATTGACAGCGCT+TGG + chr7.1:3900160-3900179 MS.gene050962:intron 50.0%
!! CAACAACACTTGGATTGGCG+CGG + chr7.1:3900246-3900265 MS.gene050962:CDS 50.0%
GCAGGGGACGTGATTCTGAA+AGG + chr7.1:3897862-3897881 MS.gene050962:intron 55.0%
GGTCCTGGATGTTCGAGGAA+AGG + chr7.1:3899365-3899384 MS.gene050962:CDS 55.0%
TCCAGGATCAAAGCTGAGGG+AGG + chr7.1:3898991-3899010 MS.gene050962:CDS 55.0%
TCCTCGGCAGTTAACTACCG+AGG + chr7.1:3898371-3898390 MS.gene050962:intron 55.0%
TCCTCGGCAGTTAACTACCG+AGG - chr7.1:3898390-3898371 None:intergenic 55.0%
TCCTCGGTAGTTAACTGCCG+AGG + chr7.1:3897754-3897773 MS.gene050962:intron 55.0%
TCCTCGGTAGTTAACTGCCG+AGG - chr7.1:3897773-3897754 None:intergenic 55.0%
TTCACCGCCACCTAAACCCA+AGG + chr7.1:3897490-3897509 MS.gene050962:CDS 55.0%
! ACCTCCCTCAGCTTTGATCC+TGG - chr7.1:3898995-3899014 None:intergenic 55.0%
! GACAAGCAGTTGGCCTCTCA+TGG + chr7.1:3899581-3899600 MS.gene050962:CDS 55.0%
! GTGTCATTGACAGCGCTTGG+TGG + chr7.1:3900163-3900182 MS.gene050962:intron 55.0%
CCTCGGCAGTTAACTGCAGC+CGG + chr7.1:3898398-3898417 MS.gene050962:intron 60.0%
CCTCGGCAGTTAACTGCAGC+CGG - chr7.1:3898417-3898398 None:intergenic 60.0%
CCTCGGCAGTTAACTGCCGA+GGG + chr7.1:3897697-3897716 MS.gene050962:intron 60.0%
CCTCGGCAGTTAACTGCCGA+GGG - chr7.1:3897716-3897697 None:intergenic 60.0%
CTCGGCAGTTAACTGCCGAG+GGG + chr7.1:3897698-3897717 MS.gene050962:intron 60.0%
CTCGGCAGTTAACTGCCGAG+GGG - chr7.1:3897717-3897698 None:intergenic 60.0%
TCCTCGGCAGTTAACTGCCG+AGG + chr7.1:3898430-3898449 MS.gene050962:intron 60.0%
TCCTCGGCAGTTAACTGCCG+AGG - chr7.1:3898449-3898430 None:intergenic 60.0%
TCGGCAGTTAACTGCCGAGG+GGG + chr7.1:3897699-3897718 MS.gene050962:intron 60.0%
TCGGCAGTTAACTGCCGAGG+GGG - chr7.1:3897718-3897699 None:intergenic 60.0%
CCCTCGGCAGTTAACTGCCG+AGG + chr7.1:3897696-3897715 MS.gene050962:intron 65.0%
CCCTCGGCAGTTAACTGCCG+AGG - chr7.1:3897715-3897696 None:intergenic 65.0%
CCGGCTGCAGTTAACTGCCG+AGG + chr7.1:3897728-3897747 MS.gene050962:intron 65.0%
CCGGCTGCAGTTAACTGCCG+AGG - chr7.1:3897747-3897728 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 3897023 3901483 3897023 ID=MS.gene050962
chr7.1 mRNA 3897023 3901483 3897023 ID=MS.gene050962.t1;Parent=MS.gene050962
chr7.1 exon 3897023 3897177 3897023 ID=MS.gene050962.t1.exon1;Parent=MS.gene050962.t1
chr7.1 CDS 3897023 3897177 3897023 ID=cds.MS.gene050962.t1;Parent=MS.gene050962.t1
chr7.1 exon 3897264 3897324 3897264 ID=MS.gene050962.t1.exon2;Parent=MS.gene050962.t1
chr7.1 CDS 3897264 3897324 3897264 ID=cds.MS.gene050962.t1;Parent=MS.gene050962.t1
chr7.1 exon 3897477 3897511 3897477 ID=MS.gene050962.t1.exon3;Parent=MS.gene050962.t1
chr7.1 CDS 3897477 3897511 3897477 ID=cds.MS.gene050962.t1;Parent=MS.gene050962.t1
chr7.1 exon 3898900 3899387 3898900 ID=MS.gene050962.t1.exon4;Parent=MS.gene050962.t1
chr7.1 CDS 3898900 3899387 3898900 ID=cds.MS.gene050962.t1;Parent=MS.gene050962.t1
chr7.1 exon 3899504 3899664 3899504 ID=MS.gene050962.t1.exon5;Parent=MS.gene050962.t1
chr7.1 CDS 3899504 3899664 3899504 ID=cds.MS.gene050962.t1;Parent=MS.gene050962.t1
chr7.1 exon 3899795 3900007 3899795 ID=MS.gene050962.t1.exon6;Parent=MS.gene050962.t1
chr7.1 CDS 3899795 3900007 3899795 ID=cds.MS.gene050962.t1;Parent=MS.gene050962.t1
chr7.1 exon 3900176 3900350 3900176 ID=MS.gene050962.t1.exon7;Parent=MS.gene050962.t1
chr7.1 CDS 3900176 3900350 3900176 ID=cds.MS.gene050962.t1;Parent=MS.gene050962.t1
chr7.1 exon 3901032 3901483 3901032 ID=MS.gene050962.t1.exon8;Parent=MS.gene050962.t1
chr7.1 CDS 3901032 3901483 3901032 ID=cds.MS.gene050962.t1;Parent=MS.gene050962.t1
Gene Sequence

>MS.gene050962

ATGGCATCGAAGAGGACATCTCATAGTGATAGTACTAGTCGTAGTTGTGATGACAAGGATCTTTATGTTCCTTCAACCAGCAGTACTAAGCGAATAAAACAACATCATGGGAACCGAGAAGAACAACAAAAGGAGATCCAACACCTTTTATTTCCGTATGTGTTTTATTTTTATTTGATGTACCTTTAAATGTTCCTTTCTTTCTTACTAGTATTTGACTTGACTTCTTTTGTTTTTGCAGCACTATCAGATTCAGTGCCACTGCATTCGCCTTTTGCTTGGAACCCTTACTTCGAAAACTGGTAGGTAATTAACTAACCATTCACCCTCTTACTATATTCCCCTTTAGACCTTTCTTGCTCCATCACCATGTAGTATATACTATTACTAATTAATAATGGATACCAAACTTTGATACTACTAACTCTTATGTTCTGTTTTGTTCCTCAACCAGATACAAGAGGCGATTCACCGCCACCTAAACCCAAGGTATGTCTCTTTAATCCTTCTTTGTCAAATGTTTCCAGTCCATTCATTAAGAGGTTTGAATTTTGTTTTGTTTTTGTGAGAGTGAAAATAATTTACCCTTGTCTACTCCCAACATTTATAATAAGAAAATTGTTGTTCACACATTAGAGAAGACTGGGACACACATGTAAAATACGTTTTTGCCCCCTCGGCAGTTAACTGCCGAGGAATTTAAAACCGGCTGCAGTTAACTGCCGAGGAAATCCTCGGTAGTTAACTGCCGAGGAATATTGTTGATATTGTTATTTGTTGTTATTTGTTCTATCATGTTTTTTTTTTAAGACAATATTGTTTCATCATGTTGGAAAGTGGCAGGGGACGTGATTCTGAAAGGAGTTTAGAAACATTAAACTCCAACACACAGGGAACTTCATTAAGCAAGCATTTGCAACACAAGCTTCAACACACACAAATCAAATTTGCAACACAAGCTTCAACACACACAAATCAAATCCAAAAAATCAATTGTCTTCAACACACAAACCCATGCCCAAATTCGTTCACCGAGATTCGCATACCCAAATTTGTAAATCCAAATTCACCATCACATGCCTAGATTCGTTCACCCTAATTACATAATTTTTTAATCTGAATTTGATTTTGAAATGGATCTGAAATTGATTTTGAGGTGGGAAGTGTAAAATGAATTTGATTTTGAAAATGGAAGATGATGAAGATGATTGCAGATTGCATTTTGCGGACTGCGTTTTTTCTGACTGCGGATTTATGGATTTTGGGAGAAGAAATGTTTTGTTTGTGAGGATGTTATGAACAGTGCGAGAGAGAGGAAGAGAAGATGAACAGTGAAAAAATTTCTGATTCCTCGGCAGTTAACTACCGAGGATTTCCTCGGCAGTTAACTGCAGCCGGATTTTTAATTCCTCGGCAGTTAACTGCCGAGGGGGCAAAAGCGTATTTTACATGTGTGTCCCAGCCTTCTCTAATGTGTCAACAATTTTCTTATAATAATGGATTATAATAATTTAAGAGGTATGTCTCTCAAATTGTTTTTTATTTTTTATTATCAAAACGAATTATAATTTAATATGAAGGAGTGTTAGGACAATGGTTAAGAAAGTAAATATATAAATCTTGTGTTGAAAAGTGGTGAATTTAATGTTTTATAAATTTATAAATTATTATTTTTAATTTAAAACTATTACTTTCGTTTCTTTTAACTAATGTTTTTAGAACACCAGTTTGTCTGACCCAACCAACCGTTGTTCAAGTAAAAGTAAAGGCTACAAAATTTAAGACCGAAAGATATAAACTCAATTTCAATTTTAAATTACAATCATTTCACAAAGCAAAATTAATTATATTGATATTTGTTTTTGTTTGGAATTTAGTTGTGGATTGACGCTTATGTCCAACACATTTGGAAGGAGACGTTTGCAATTGTATTTCATGAACAAATTGCCAAACAGAATTTTCACAAAGTCCAGGATCAAAGCTGAGGGAGGTGAACCACTTCAAATTGAACTGCGTGATGTTGAAAATCAGCAACGCGTAGTCATGGAAGAAGGTTCCTCCATGAAGATCCAATTATGTGTCCTATATGGTGACTTTGAAAAAGAGGATTGGACAGCTGAGGAATTTAATACTCAAATTGCACCTCCAAGAGAGGGAAAAGAAGAACTGTTGAAAGGAAATGAATTCATTACACTAAGAAATGGAGTTGCTGATATCGACAAAGAGATTGAGTTTACAGATATATCAAAGGGAAGAAACGGTCAATTTCGGCTAGGGGTTAAAATAGTTCAATCAAATTCAATTGGAGTGTGCATTCGGGAAGGTAGAAGCGAACCTTTTAAGGTCCTGGATGTTCGAGGAAAGGGTAAGTTCTAAACCTCCGACAAATGTTAGTAATTAGCTATTAAAATAGGTATATGTGATCTCTTGACTTTGATTTTTATTACATTTTTTATGTGCTTTGACATTTGATCATTTCAGATTACGAGAAACACGATCGTCCATCGTTGAATGATGAGGTATGGCGTCTGAAAGGGATACGTAAAAATGGTAAACTTGACAAGCAGTTGGCCTCTCATGGAATACAAACTGTTAAGGATTTTTTAAGATTGTACATAACCAATGAAGCTTCATTAAGAGAGGTAAGAAAATATTTTGAAATATTATGTGTGGTATTATGATTCTTTACTTTAGCCCTAATACTTCTTTATTTAGTTGTTTGATACTTTTGACATTAATGTTGTATATGATTTTTTGGCTTTGGGAAAATAGAAAATAGGCAAGATTGCAAGGAATTCATGGAATACAATTGTTGCACATGCTAAAGATTGTGATGTAGACGATGCTGATGAGCGCTACATCTATTACGCAACTGAACAACCAATATCGTTCCTTGTCTTTAATGCAATTTATAAGGTTGTGGAGGTGACTTTTGATAATGGACAAAACGCTCGTTCTATTCAATCTCTAAACCAGCAAGAAAAGGTTTGTGTTTGCATCCTATATCATAATGTTGGTAGATCCCTTTGGCTGTGAATATTCAGAGTGGACCTTATATGGATTCTTAAATTTAGTGATTCATATCTTACCAAAATATAGTTGTGTATAGTACTCATATCTCTTATATGATCAAAACACTTGTGTCATTGACAGCGCTTGGTGGAAAGAGTTAAGCAACGTGCTTACAAACATTTCAATGATCGGAATCCATTGCCAATTGATACAACAACACTTGGATTGGCGCGGACATTGACAAGTGTACAAAATGCACAATATGACGGTCAAAATCAAGCCCTGCAACAGTCTGACTTTCTAGTTTGTCAGCAAGGTACTCTATAATCTATATATACACTTATATTCTGCATAAAACCTTTTGGATGCATTTCAAAACTGAAAAAGTCTCAAGTTGTATAGGTGTTGAGTCTTGAAGAGGGTATATAACTACGTTTAAAAACTACTAATTTTCAATTTTTTTCGTTGATATCCTAATTCTATCTGTCTGGTCCGTTAAATGCTTCTTTTACTAGTTGTGCCAGACTAACATTTTGTCTTGCAGATATATAAAAATTTGACAGTTACATAAGACAAATATTGTGAAATGTAGGCTAAGGTATTCAATTCAAGCATATATAAAACCGAAGTTATAGTGAAATGTAGCACATTGTTTCCTTTTCTATTTGTCCTGAAAACTAGTAATAATCCTGGTGTATAGCATCCCTCATATTTAAATACATGAAGAAATTCCAAGATAAAACATAGATTTGGTGAAATTTTGTTGTGTCATGGCATGTGTATTTATTTCTACCAGAAAACCAATAAATCAATATTATTACATATGTAAATAAATACAATACCAAACTTGACAAACCTTTCTGTGGCAGTCACTAAACTTTCTTGTTTGTCATATATGTGAGTTTTTGTTATAGTTTTTGTCTTATTTTTGTCGATCATGTTCTTAATATTGTATACTTTGCTCTAATATTTTAGTATTTTACTATATCTTGTACAGGTCAAAAAGAAATTGGGCAAAGTTATGTTCAACCATGTATCTCTACTTCATATGTTAATGAGGGAATGGATAATTACCAGATCTATGTTGATCCAGTGCCAGACATAAGAGAAATACCACGAAACAATCATGTCGGAGCTGAAATGTACATTGATGGGGATGGTTATGGATCACATTTTCCAGTTGTAGAAGGTGGCTATTCGATGGAGAATCTCATGAATGACTATCCTATGTATGCAACATGCGAGCCAGAAAATTACAACTTATATGGTTTCTCTGATGTAGCTGAGTGTAGCACCCATGTTAATATCCTCAATTCCTCTATGGATATATCAAGCAGTGATAAATCAAAAGCAGTGTGGTGTAAGGTTGGGATTGCTATCAAATGGGTCATATCAATAAGGGCTGCAGCTGCTGCCAAGAAGAATGCAAACTTGTTTTATTTTAACTAA

Protein sequence

>MS.gene050962.t1

MASKRTSHSDSTSRSCDDKDLYVPSTSSTKRIKQHHGNREEQQKEIQHLLFPTIRFSATAFAFCLEPLLRKLIQEAIHRHLNPSCGLTLMSNTFGRRRLQLYFMNKLPNRIFTKSRIKAEGGEPLQIELRDVENQQRVVMEEGSSMKIQLCVLYGDFEKEDWTAEEFNTQIAPPREGKEELLKGNEFITLRNGVADIDKEIEFTDISKGRNGQFRLGVKIVQSNSIGVCIREGRSEPFKVLDVRGKDYEKHDRPSLNDEVWRLKGIRKNGKLDKQLASHGIQTVKDFLRLYITNEASLREKIGKIARNSWNTIVAHAKDCDVDDADERYIYYATEQPISFLVFNAIYKVVEVTFDNGQNARSIQSLNQQEKRLVERVKQRAYKHFNDRNPLPIDTTTLGLARTLTSVQNAQYDGQNQALQQSDFLVCQQGQKEIGQSYVQPCISTSYVNEGMDNYQIYVDPVPDIREIPRNNHVGAEMYIDGDGYGSHFPVVEGGYSMENLMNDYPMYATCEPENYNLYGFSDVAECSTHVNILNSSMDISSSDKSKAVWCKVGIAIKWVISIRAAAAAKKNANLFYFN