Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09641.t1 | XP_003611508.1 | 99.2 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 1.80E-197 | 698.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09641.t1 | P37228 | 85.8 | 358 | 46 | 1 | 1 | 358 | 1 | 353 | 5.7e-168 | 591.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09641.t1 | G7K140 | 99.2 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 1.3e-197 | 698.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09641 | MS.gene40601 | PPI |
| MS.gene09641 | MS.gene025802 | PPI |
| MS.gene09641 | MS.gene028531 | PPI |
| MS.gene09641 | MS.gene09966 | PPI |
| MS.gene09641 | MS.gene025803 | PPI |
| MS.gene09641 | MS.gene015443 | PPI |
| MS.gene09641 | MS.gene40108 | PPI |
| MS.gene09641 | MS.gene21162 | PPI |
| MS.gene09641 | MS.gene053632 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09641.t1 | MTR_5g014710 | 99.162 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 0.0 | 725 |
| MS.gene09641.t1 | MTR_4g092690 | 80.168 | 358 | 69 | 1 | 1 | 358 | 1 | 356 | 0.0 | 592 |
| MS.gene09641.t1 | MTR_8g463760 | 65.705 | 312 | 106 | 1 | 45 | 355 | 29 | 340 | 1.08e-146 | 418 |
| MS.gene09641.t1 | MTR_8g463760 | 70.526 | 190 | 56 | 0 | 45 | 234 | 29 | 218 | 2.23e-91 | 274 |
| MS.gene09641.t1 | MTR_2g021700 | 80.000 | 60 | 12 | 0 | 204 | 263 | 43 | 102 | 4.48e-27 | 104 |
| MS.gene09641.t1 | MTR_2g045010 | 80.000 | 60 | 12 | 0 | 204 | 263 | 43 | 102 | 4.48e-27 | 104 |
| MS.gene09641.t1 | MTR_4g033285 | 81.481 | 54 | 10 | 0 | 204 | 257 | 43 | 96 | 3.60e-24 | 95.5 |
| MS.gene09641.t1 | MTR_5g012390 | 24.710 | 259 | 160 | 11 | 48 | 286 | 39 | 282 | 7.54e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09641.t1 | AT2G22780 | 82.906 | 351 | 60 | 0 | 8 | 358 | 4 | 354 | 0.0 | 598 |
| MS.gene09641.t1 | AT5G09660 | 78.771 | 358 | 72 | 1 | 1 | 358 | 1 | 354 | 0.0 | 556 |
| MS.gene09641.t1 | AT5G09660 | 78.492 | 358 | 72 | 2 | 1 | 358 | 1 | 353 | 0.0 | 550 |
| MS.gene09641.t1 | AT5G09660 | 83.540 | 322 | 53 | 0 | 37 | 358 | 12 | 333 | 0.0 | 541 |
| MS.gene09641.t1 | AT5G09660 | 80.263 | 304 | 56 | 1 | 1 | 304 | 1 | 300 | 8.55e-171 | 480 |
| MS.gene09641.t1 | AT5G09660 | 86.194 | 268 | 37 | 0 | 37 | 304 | 12 | 279 | 3.23e-165 | 465 |
| MS.gene09641.t1 | AT1G53240 | 66.456 | 316 | 106 | 0 | 40 | 355 | 23 | 338 | 3.22e-152 | 432 |
| MS.gene09641.t1 | AT3G15020 | 67.203 | 311 | 102 | 0 | 45 | 355 | 28 | 338 | 6.58e-151 | 429 |
| MS.gene09641.t1 | AT3G47520 | 63.754 | 309 | 110 | 1 | 47 | 353 | 83 | 391 | 3.96e-143 | 411 |
| MS.gene09641.t1 | AT3G15020 | 67.518 | 274 | 89 | 0 | 45 | 318 | 28 | 301 | 1.67e-131 | 379 |
| MS.gene09641.t1 | AT3G53910 | 32.584 | 89 | 58 | 1 | 272 | 358 | 6 | 94 | 1.91e-12 | 63.5 |
Find 98 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAATTTGCATATGAATT+TGG | 0.129618 | 5.2:+6684223 | None:intergenic |
| AGGATTCAAAGTTGCGATTT+TGG | 0.162640 | 5.2:-6683994 | MS.gene09641:CDS |
| GCTTGTTGCTAACTCTTTCT+TGG | 0.221091 | 5.2:+6679824 | None:intergenic |
| TCAAGTACTCAATTTCCTTT+GGG | 0.248840 | 5.2:+6681191 | None:intergenic |
| CAGCTTGAGGATGCACTTAC+AGG | 0.286947 | 5.2:-6682846 | MS.gene09641:CDS |
| TTGACAGATCGCATACAAAA+TGG | 0.300388 | 5.2:-6681172 | MS.gene09641:CDS |
| GTCAAGTACTCAATTTCCTT+TGG | 0.312990 | 5.2:+6681190 | None:intergenic |
| ATATTTCAACAGGGCAAGTT+TGG | 0.323504 | 5.2:-6679853 | MS.gene09641:intron |
| TGTTTAGGTTCGAGGATTCT+TGG | 0.325611 | 5.2:-6682877 | MS.gene09641:intron |
| GTTTAGGTTCGAGGATTCTT+GGG | 0.338537 | 5.2:-6682876 | MS.gene09641:intron |
| ATGTGGATGTTCCTGTTGTC+GGG | 0.339112 | 5.2:-6681378 | MS.gene09641:CDS |
| AGATCATCTCTTGTCATTCC+AGG | 0.341489 | 5.2:+6682783 | None:intergenic |
| TAAAATTCAGGCTGAAGTTA+TGG | 0.356116 | 5.2:-6681416 | MS.gene09641:intron |
| TGCAGATCCAGCTCCAGCTT+TGG | 0.369553 | 5.2:+6680597 | None:intergenic |
| TGCACTTACAGGTATGGATT+TGG | 0.375153 | 5.2:-6682835 | MS.gene09641:CDS |
| TGACAATGCTTGACGTGGTT+AGG | 0.381452 | 5.2:-6682593 | MS.gene09641:CDS |
| TTGAAAACCTCAGCCGCAAT+AGG | 0.389125 | 5.2:+6682654 | None:intergenic |
| CACTGTTCCTATTGCGGCTG+AGG | 0.396544 | 5.2:-6682661 | MS.gene09641:CDS |
| AAGAGGTAAAATCGTGATTC+CGG | 0.396845 | 5.2:+6681348 | None:intergenic |
| CTCTAGGCCAAAGCTGGAGC+TGG | 0.397270 | 5.2:-6680604 | MS.gene09641:intron |
| AAAATTCAGGCTGAAGTTAT+GGG | 0.399622 | 5.2:-6681415 | MS.gene09641:intron |
| GTTGAGGAATTTCTTCCTCT+TGG | 0.402166 | 5.2:-6679984 | MS.gene09641:CDS |
| ATAGGAACAGTGGAGTTAAC+TGG | 0.409234 | 5.2:+6682672 | None:intergenic |
| GTCACTCCCAACAGTCTCTT+GGG | 0.415028 | 5.2:+6682612 | None:intergenic |
| CAACAGGGCAAGTTTGGAAA+AGG | 0.416141 | 5.2:-6679847 | MS.gene09641:intron |
| TGTCACTCCCAACAGTCTCT+TGG | 0.418692 | 5.2:+6682611 | None:intergenic |
| GATGTGGATGTTCCTGTTGT+CGG | 0.424834 | 5.2:-6681379 | MS.gene09641:CDS |
| CATACCTCTCATAATCACTT+AGG | 0.429482 | 5.2:+6679958 | None:intergenic |
| ATGTTCATTGCCGTGCCAAA+GGG | 0.429704 | 5.2:-6684025 | MS.gene09641:CDS |
| GATCTCTTCAATATTAATGC+TGG | 0.432800 | 5.2:-6682765 | MS.gene09641:CDS |
| GATTTGGTAATCATTCCTGC+TGG | 0.434549 | 5.2:-6682819 | MS.gene09641:CDS |
| TGACAGATCGCATACAAAAT+GGG | 0.435560 | 5.2:-6681171 | MS.gene09641:CDS |
| GTTAGCAACAAGCGTGGAGA+AGG | 0.441857 | 5.2:-6679814 | MS.gene09641:CDS |
| GACAATGCTTGACGTGGTTA+GGG | 0.451116 | 5.2:-6682592 | MS.gene09641:CDS |
| ATACCTCTCATAATCACTTA+GGG | 0.455021 | 5.2:+6679959 | None:intergenic |
| TTGGGTGCTGCTGGTGGCAT+AGG | 0.470171 | 5.2:-6683975 | MS.gene09641:CDS |
| ATCTTCATCAACATAGAAAG+AGG | 0.476416 | 5.2:+6683948 | None:intergenic |
| ATCTCTTCAATATTAATGCT+GGG | 0.478335 | 5.2:-6682764 | MS.gene09641:CDS |
| ATTTGGTAATCATTCCTGCT+GGG | 0.479832 | 5.2:-6682818 | MS.gene09641:CDS |
| CATACATACCACAAACGTAT+TGG | 0.480102 | 5.2:+6682569 | None:intergenic |
| TATGATCCCAAGAGACTGTT+GGG | 0.480871 | 5.2:-6682618 | MS.gene09641:CDS |
| TATGATGTCGTTAATACTCC+TGG | 0.481340 | 5.2:-6683897 | MS.gene09641:CDS |
| ATCAAGTTTACAATCGCCTT+AGG | 0.482390 | 5.2:+6682702 | None:intergenic |
| ATGTGCATATGTTGATTCAC+AGG | 0.490249 | 5.2:-6680217 | MS.gene09641:intron |
| TGAGGATGCACTTACAGGTA+TGG | 0.495906 | 5.2:-6682841 | MS.gene09641:CDS |
| GCTGGGGTTCCTCGTAAACC+TGG | 0.496436 | 5.2:-6682801 | MS.gene09641:CDS |
| GGTTAGGGCCAATACGTTTG+TGG | 0.497203 | 5.2:-6682577 | MS.gene09641:intron |
| CCTTGAGATTGGGAGGATTG+AGG | 0.501008 | 5.2:+6684179 | None:intergenic |
| AATTTCCTTTGGGGTGAAAG+AGG | 0.509427 | 5.2:+6681201 | None:intergenic |
| TGGATCTGCAACACTATCAA+TGG | 0.512103 | 5.2:-6680584 | MS.gene09641:intron |
| AATGTTCATTGCCGTGCCAA+AGG | 0.520173 | 5.2:-6684026 | MS.gene09641:CDS |
| TCCTTTGGGGTGAAAGAGGA+AGG | 0.520708 | 5.2:+6681205 | None:intergenic |
| ACAGGAACATCCACATCCCT+TGG | 0.523779 | 5.2:+6681385 | None:intergenic |
| GGTTTACGAGGAACCCCAGC+AGG | 0.525855 | 5.2:+6682804 | None:intergenic |
| GTTGATGAAGATGAATCCAT+TGG | 0.529675 | 5.2:-6683937 | MS.gene09641:CDS |
| AAAATCGCAACTTTGAATCC+TGG | 0.532660 | 5.2:+6683996 | None:intergenic |
| ACCTTCCTCTTTCACCCCAA+AGG | 0.539622 | 5.2:-6681206 | MS.gene09641:CDS |
| GAAATTCCTCAACTCCGTTA+CGG | 0.539768 | 5.2:+6679994 | None:intergenic |
| GCATGTCTTCGTGCGTTGAA+AGG | 0.542596 | 5.2:-6680258 | MS.gene09641:CDS |
| AAAGTACGACTTGGCCGTAA+CGG | 0.543008 | 5.2:-6680008 | MS.gene09641:CDS |
| TAACTCCACTGTTCCTATTG+CGG | 0.545645 | 5.2:-6682667 | MS.gene09641:CDS |
| AAGTTATGGGTCTTGATCCA+AGG | 0.546437 | 5.2:-6681402 | MS.gene09641:CDS |
| ATTGGGAGGATTGAGGTGGC+TGG | 0.548918 | 5.2:+6684186 | None:intergenic |
| GATTGCAAAGCGATGTCCTA+AGG | 0.560507 | 5.2:-6682718 | MS.gene09641:CDS |
| TTTGGTAATCATTCCTGCTG+GGG | 0.563841 | 5.2:-6682817 | MS.gene09641:CDS |
| TTATGATCCCAAGAGACTGT+TGG | 0.575018 | 5.2:-6682619 | MS.gene09641:CDS |
| GGGTCTTGATCCAAGGGATG+TGG | 0.578747 | 5.2:-6681395 | MS.gene09641:CDS |
| TTTGCATCAAAAGTACGACT+TGG | 0.583080 | 5.2:-6680017 | MS.gene09641:CDS |
| TGTGGATGTTCCTGTTGTCG+GGG | 0.585204 | 5.2:-6681377 | MS.gene09641:CDS |
| CAAGTACTCAATTTCCTTTG+GGG | 0.586894 | 5.2:+6681192 | None:intergenic |
| CTGATATCAGAAGTAACACC+AGG | 0.589402 | 5.2:+6683879 | None:intergenic |
| CTTGTCATTCCAGGTTTACG+AGG | 0.590955 | 5.2:+6682792 | None:intergenic |
| GACAGATCGCATACAAAATG+GGG | 0.591432 | 5.2:-6681170 | MS.gene09641:CDS |
| TTAGCAACAAGCGTGGAGAA+GGG | 0.591626 | 5.2:-6679813 | MS.gene09641:CDS |
| TTTAGGTTCGAGGATTCTTG+GGG | 0.597375 | 5.2:-6682875 | MS.gene09641:intron |
| AGATGAAGAACAGAAACCAA+TGG | 0.604683 | 5.2:+6683921 | None:intergenic |
| AGTTATGGGTCTTGATCCAA+GGG | 0.605244 | 5.2:-6681401 | MS.gene09641:CDS |
| ACTTGGCCGTAACGGAGTTG+AGG | 0.606364 | 5.2:-6680000 | MS.gene09641:CDS |
| GTGCAGACCTGAGAAAGAAG+AGG | 0.606511 | 5.2:+6681331 | None:intergenic |
| CTTGGGGCAAAATCAGCTTG+AGG | 0.607236 | 5.2:-6682859 | MS.gene09641:CDS |
| AAACGTACCTTGAGATTGGG+AGG | 0.611382 | 5.2:+6684172 | None:intergenic |
| TACTTCTGATATCAGTCACA+TGG | 0.612010 | 5.2:-6683871 | MS.gene09641:CDS |
| CCTCAATCCTCCCAATCTCA+AGG | 0.621292 | 5.2:-6684179 | MS.gene09641:intron |
| GTGGATGTTCCTGTTGTCGG+GGG | 0.624820 | 5.2:-6681376 | MS.gene09641:CDS |
| GAAAGAGTTAGCAACAAGCG+TGG | 0.628742 | 5.2:-6679820 | MS.gene09641:CDS |
| GTTCATTGCCGTGCCAAAGG+GGG | 0.629166 | 5.2:-6684023 | MS.gene09641:CDS |
| TGTTCATTGCCGTGCCAAAG+GGG | 0.630055 | 5.2:-6684024 | MS.gene09641:CDS |
| GTCCCCTAAGTGATTATGAG+AGG | 0.633118 | 5.2:-6679962 | MS.gene09641:intron |
| CTCAGCCGCAATAGGAACAG+TGG | 0.637103 | 5.2:+6682662 | None:intergenic |
| TTTGGGGTGAAAGAGGAAGG+TGG | 0.646297 | 5.2:+6681208 | None:intergenic |
| TCTTCGTGCGTTGAAAGGAG+AGG | 0.666069 | 5.2:-6680253 | MS.gene09641:CDS |
| TAATCACTTAGGGGACCAAG+AGG | 0.668806 | 5.2:+6679969 | None:intergenic |
| TGAGATTGGGAGGATTGAGG+TGG | 0.679990 | 5.2:+6684182 | None:intergenic |
| TACCTCTCATAATCACTTAG+GGG | 0.681098 | 5.2:+6679960 | None:intergenic |
| GGGAGTGACAATGCTTGACG+TGG | 0.697199 | 5.2:-6682598 | MS.gene09641:CDS |
| ACAGATCGCATACAAAATGG+GGG | 0.720421 | 5.2:-6681169 | MS.gene09641:CDS |
| GTTATGTAGATGAATGAACA+TGG | 0.725435 | 5.2:-6684065 | MS.gene09641:intron |
| ATGTAGATGAATGAACATGG+TGG | 0.812154 | 5.2:-6684062 | MS.gene09641:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTGAATATAAATAGAT+GGG | - | chr5.2:6683467-6683486 | MS.gene09641:intron | 10.0% |
| !!! | TTATTTTGAATATAAATAGA+TGG | - | chr5.2:6683466-6683485 | MS.gene09641:intron | 10.0% |
| !! | AAGTAAGAAATTAAATCTTT+GGG | - | chr5.2:6681639-6681658 | MS.gene09641:intron | 15.0% |
| !! | TAAGTAAGAAATTAAATCTT+TGG | - | chr5.2:6681638-6681657 | MS.gene09641:intron | 15.0% |
| !! | TTAATTCCATTAATAAGTAT+AGG | + | chr5.2:6683503-6683522 | None:intergenic | 15.0% |
| !! | TTATTTCGTGATTTATAATT+TGG | - | chr5.2:6680205-6680224 | MS.gene09641:intron | 15.0% |
| !!! | ATATGTTGACTTAAATTATA+TGG | - | chr5.2:6683022-6683041 | MS.gene09641:intron | 15.0% |
| !!! | ATTAGAATCTTTTAAAACTA+TGG | + | chr5.2:6683882-6683901 | None:intergenic | 15.0% |
| !! | AACATTGGAATATTAGATAT+CGG | + | chr5.2:6682940-6682959 | None:intergenic | 20.0% |
| !! | AATCTTAAAAATACTTTAGC+TGG | - | chr5.2:6682011-6682030 | MS.gene09641:intron | 20.0% |
| !! | ACATATAAGAAAAACAATTG+TGG | - | chr5.2:6683560-6683579 | MS.gene09641:intron | 20.0% |
| !! | ACTCAAGTAATTAATATTGT+TGG | - | chr5.2:6681971-6681990 | MS.gene09641:intron | 20.0% |
| !! | ATATCTACTTATATTTCAAC+AGG | - | chr5.2:6684157-6684176 | MS.gene09641:intron | 20.0% |
| !! | ATTCAAAGATCATCATAAAT+TGG | + | chr5.2:6681679-6681698 | None:intergenic | 20.0% |
| !! | ATTTGTGCAAATTTGATTAT+CGG | - | chr5.2:6680339-6680358 | MS.gene09641:intron | 20.0% |
| !! | CCAAAAAAGTAATAAATGAA+TGG | - | chr5.2:6683529-6683548 | MS.gene09641:intron | 20.0% |
| !! | TATCTACTTATATTTCAACA+GGG | - | chr5.2:6684158-6684177 | MS.gene09641:intron | 20.0% |
| !! | TTTATGATGATCTTTGAATA+TGG | - | chr5.2:6681680-6681699 | MS.gene09641:intron | 20.0% |
| !!! | ATTTCTTACTTAAAGTATCA+TGG | + | chr5.2:6681630-6681649 | None:intergenic | 20.0% |
| !!! | CCATTCATTTATTACTTTTT+TGG | + | chr5.2:6683532-6683551 | None:intergenic | 20.0% |
| !!! | CTTATTTTTATAAGAGTGTT+AGG | + | chr5.2:6680938-6680957 | None:intergenic | 20.0% |
| !!! | CTTTAATTTTTCTATATGCA+GGG | - | chr5.2:6683204-6683223 | MS.gene09641:intron | 20.0% |
| !!! | TATTTTATTAGGTGAAATCA+AGG | + | chr5.2:6680892-6680911 | None:intergenic | 20.0% |
| !!! | TCATTTTTACATGTATCAAT+AGG | + | chr5.2:6684123-6684142 | None:intergenic | 20.0% |
| !!! | TGAATAAGTACTTTTTCTTA+AGG | - | chr5.2:6683942-6683961 | MS.gene09641:CDS | 20.0% |
| !!! | TTGTTACCATATTTGATTTT+AGG | - | chr5.2:6682734-6682753 | MS.gene09641:CDS | 20.0% |
| !!! | TTTCTTACTTAAAGTATCAT+GGG | + | chr5.2:6681629-6681648 | None:intergenic | 20.0% |
| ! | ACAAAAACTAGATGATTAGA+TGG | + | chr5.2:6682430-6682449 | None:intergenic | 25.0% |
| ! | ATCTCTTCAATATTAATGCT+GGG | - | chr5.2:6681256-6681275 | MS.gene09641:intron | 25.0% |
| ! | CATATATACTTGTATAGCAT+AGG | + | chr5.2:6683312-6683331 | None:intergenic | 25.0% |
| ! | CTAAATAATCAAATCCAAAC+AGG | - | chr5.2:6681016-6681035 | MS.gene09641:intron | 25.0% |
| ! | TGGATACACAACTTAATTAA+GGG | - | chr5.2:6680504-6680523 | MS.gene09641:intron | 25.0% |
| ! | TTGAAAATACTAATCTGTCT+TGG | - | chr5.2:6683252-6683271 | MS.gene09641:intron | 25.0% |
| ! | TTGGATACACAACTTAATTA+AGG | - | chr5.2:6680503-6680522 | MS.gene09641:intron | 25.0% |
| !! | AAAACTTTTCCTACAAACAA+AGG | + | chr5.2:6683097-6683116 | None:intergenic | 25.0% |
| !! | ACAATGTTGTAATTTTCTCT+AGG | - | chr5.2:6683400-6683419 | MS.gene09641:intron | 25.0% |
| !! | ATTTGATTATTTAGCTTCGA+GGG | + | chr5.2:6681010-6681029 | None:intergenic | 25.0% |
| !! | CTAACACTCACTATTTTATT+AGG | + | chr5.2:6680903-6680922 | None:intergenic | 25.0% |
| !! | CTATGGATTATCTATACATT+TGG | - | chr5.2:6683365-6683384 | MS.gene09641:intron | 25.0% |
| !! | GCTTGATAGTTTATAAAAAG+AGG | - | chr5.2:6680766-6680785 | MS.gene09641:intron | 25.0% |
| !!! | AAAATACTGCAGTTTTTTCA+AGG | + | chr5.2:6682289-6682308 | None:intergenic | 25.0% |
| !!! | AAATACTGCAGTTTTTTCAA+GGG | + | chr5.2:6682288-6682307 | None:intergenic | 25.0% |
| !!! | AAATGCTTTGAATTTTGTAG+AGG | - | chr5.2:6683159-6683178 | MS.gene09641:intron | 25.0% |
| !!! | AATCTTTTAAAACTATGGCA+GGG | + | chr5.2:6683877-6683896 | None:intergenic | 25.0% |
| !!! | CAACATGCATTTTTGTTTTA+GGG | + | chr5.2:6681042-6681061 | None:intergenic | 25.0% |
| !!! | CTTTTTTGAAATTTCGTTCT+TGG | - | chr5.2:6683629-6683648 | MS.gene09641:intron | 25.0% |
| !!! | GCTTTAATTTTTCTATATGC+AGG | - | chr5.2:6683203-6683222 | MS.gene09641:intron | 25.0% |
| !!! | TCAACATGCATTTTTGTTTT+AGG | + | chr5.2:6681043-6681062 | None:intergenic | 25.0% |
| !!! | TGTTGACTTAAATTATATGG+TGG | - | chr5.2:6683025-6683044 | MS.gene09641:intron | 25.0% |
| AAAATACTAATCTGTCTTGG+TGG | - | chr5.2:6683255-6683274 | MS.gene09641:intron | 30.0% | |
| AAAATTCAGGCTGAAGTTAT+GGG | - | chr5.2:6682605-6682624 | MS.gene09641:CDS | 30.0% | |
| AATAGAGGATCAATAGACAT+GGG | - | chr5.2:6682085-6682104 | MS.gene09641:intron | 30.0% | |
| AATTCACCCCAATAAAAAAG+TGG | + | chr5.2:6680816-6680835 | None:intergenic | 30.0% | |
| ACTTCATTTATTCTCCTTGT+TGG | - | chr5.2:6682578-6682597 | MS.gene09641:CDS | 30.0% | |
| ACTTTGTCATTGAATCTTTC+TGG | - | chr5.2:6680303-6680322 | MS.gene09641:intron | 30.0% | |
| ATACCTCTCATAATCACTTA+GGG | + | chr5.2:6684064-6684083 | None:intergenic | 30.0% | |
| ATATGATTCCTTCATTGCTA+TGG | - | chr5.2:6683348-6683367 | MS.gene09641:intron | 30.0% | |
| ATCTTCATCAACATAGAAAG+AGG | + | chr5.2:6680075-6680094 | None:intergenic | 30.0% | |
| ATTCACCCCAATAAAAAAGT+GGG | + | chr5.2:6680815-6680834 | None:intergenic | 30.0% | |
| CGTGAATTTGCATATGAATT+TGG | + | chr5.2:6679800-6679819 | None:intergenic | 30.0% | |
| CTTTGTCATTGAATCTTTCT+GGG | - | chr5.2:6680304-6680323 | MS.gene09641:intron | 30.0% | |
| GATACTATTAACGTAATGAC+AGG | - | chr5.2:6682210-6682229 | MS.gene09641:intron | 30.0% | |
| GATCTCTTCAATATTAATGC+TGG | - | chr5.2:6681255-6681274 | MS.gene09641:intron | 30.0% | |
| GATGAGTAATGATTGAACAT+TGG | + | chr5.2:6682955-6682974 | None:intergenic | 30.0% | |
| GTTATGTAGATGAATGAACA+TGG | - | chr5.2:6679955-6679974 | MS.gene09641:intron | 30.0% | |
| TAAAATTCAGGCTGAAGTTA+TGG | - | chr5.2:6682604-6682623 | MS.gene09641:CDS | 30.0% | |
| TAAGTGTAGCATAAAAAGCT+GGG | + | chr5.2:6681492-6681511 | None:intergenic | 30.0% | |
| TACAATATCAGTTCAGAAGT+TGG | - | chr5.2:6682335-6682354 | MS.gene09641:intron | 30.0% | |
| TAGATAATCCATAGCAATGA+AGG | + | chr5.2:6683359-6683378 | None:intergenic | 30.0% | |
| TATTAACGTAATGACAGGAA+GGG | - | chr5.2:6682215-6682234 | MS.gene09641:intron | 30.0% | |
| TCAAGTACTCAATTTCCTTT+GGG | + | chr5.2:6682832-6682851 | None:intergenic | 30.0% | |
| TCATGACTTCTTAACAATGT+TGG | - | chr5.2:6683673-6683692 | MS.gene09641:intron | 30.0% | |
| TGAGAGCCTATACTTATTAA+TGG | - | chr5.2:6683494-6683513 | MS.gene09641:intron | 30.0% | |
| TGCAGACCTAAAATCAAATA+TGG | + | chr5.2:6682743-6682762 | None:intergenic | 30.0% | |
| TGCTATAAGTTCTGTAATTC+TGG | + | chr5.2:6680665-6680684 | None:intergenic | 30.0% | |
| TGTTCTTTACCTATCAACTA+TGG | - | chr5.2:6682975-6682994 | MS.gene09641:intron | 30.0% | |
| TTACATTGTAAGGTTCTGTT+TGG | - | chr5.2:6680484-6680503 | MS.gene09641:intron | 30.0% | |
| TTTATAGACCCCTAATACTA+AGG | - | chr5.2:6682051-6682070 | MS.gene09641:intron | 30.0% | |
| ! | ATAACTTCAGCCTGAATTTT+AGG | + | chr5.2:6682605-6682624 | None:intergenic | 30.0% |
| ! | GATTTGATTATTTAGCTTCG+AGG | + | chr5.2:6681011-6681030 | None:intergenic | 30.0% |
| ! | TGAAGAGCAATAGTTTCTTT+TGG | - | chr5.2:6681948-6681967 | MS.gene09641:intron | 30.0% |
| ! | TTAAATCTTTGGGCAAGTTT+TGG | - | chr5.2:6681649-6681668 | MS.gene09641:intron | 30.0% |
| !! | AGTGTCATTGTTGATTCAAT+TGG | + | chr5.2:6679904-6679923 | None:intergenic | 30.0% |
| !!! | CTAACACCCACTTTTTTATT+GGG | - | chr5.2:6680806-6680825 | MS.gene09641:intron | 30.0% |
| !!! | GAATCTTTTAAAACTATGGC+AGG | + | chr5.2:6683878-6683897 | None:intergenic | 30.0% |
| !!! | TAACACCCACTTTTTTATTG+GGG | - | chr5.2:6680807-6680826 | MS.gene09641:intron | 30.0% |
| !!! | TCTAACACCCACTTTTTTAT+TGG | - | chr5.2:6680805-6680824 | MS.gene09641:intron | 30.0% |
| AAAATCGCAACTTTGAATCC+TGG | + | chr5.2:6680027-6680046 | None:intergenic | 35.0% | |
| AACCATGTCCTTAGTATTAG+GGG | + | chr5.2:6682062-6682081 | None:intergenic | 35.0% | |
| AACGAATCACTACACGTATA+TGG | + | chr5.2:6680257-6680276 | None:intergenic | 35.0% | |
| AAGAGGTAAAATCGTGATTC+CGG | + | chr5.2:6682675-6682694 | None:intergenic | 35.0% | |
| AAGGAGGGAATAATGGTAAA+AGG | - | chr5.2:6682109-6682128 | MS.gene09641:intron | 35.0% | |
| AAGTGAGCATATTTGTGAGA+AGG | - | chr5.2:6681738-6681757 | MS.gene09641:intron | 35.0% | |
| ACGAATCACTACACGTATAT+GGG | + | chr5.2:6680256-6680275 | None:intergenic | 35.0% | |
| AGATGAAGAACAGAAACCAA+TGG | + | chr5.2:6680102-6680121 | None:intergenic | 35.0% | |
| AGATGATTAGATGGACGTAA+CGG | + | chr5.2:6682421-6682440 | None:intergenic | 35.0% | |
| AGGAGGGAATAATGGTAAAA+GGG | - | chr5.2:6682110-6682129 | MS.gene09641:intron | 35.0% | |
| ATAAAATGGTGAAACCCACA+TGG | + | chr5.2:6680839-6680858 | None:intergenic | 35.0% | |
| ATATTTCAACAGGGCAAGTT+TGG | - | chr5.2:6684167-6684186 | MS.gene09641:intron | 35.0% | |
| ATCAAGTTTACAATCGCCTT+AGG | + | chr5.2:6681321-6681340 | None:intergenic | 35.0% | |
| ATGTAGATGAATGAACATGG+TGG | - | chr5.2:6679958-6679977 | MS.gene09641:intron | 35.0% | |
| CAACCATGTCCTTAGTATTA+GGG | + | chr5.2:6682063-6682082 | None:intergenic | 35.0% | |
| CAAGTACTCAATTTCCTTTG+GGG | + | chr5.2:6682831-6682850 | None:intergenic | 35.0% | |
| CATACATACCACAAACGTAT+TGG | + | chr5.2:6681454-6681473 | None:intergenic | 35.0% | |
| CATACCTCTCATAATCACTT+AGG | + | chr5.2:6684065-6684084 | None:intergenic | 35.0% | |
| CGAAGATTAAATCATCCCAT+TGG | - | chr5.2:6681855-6681874 | MS.gene09641:intron | 35.0% | |
| CTAATACTAAGGACATGGTT+GGG | - | chr5.2:6682062-6682081 | MS.gene09641:intron | 35.0% | |
| CTATTAACGTAATGACAGGA+AGG | - | chr5.2:6682214-6682233 | MS.gene09641:intron | 35.0% | |
| GAAAAACGTACCTTGAGATT+GGG | + | chr5.2:6679854-6679873 | None:intergenic | 35.0% | |
| GAATAGAGGATCAATAGACA+TGG | - | chr5.2:6682084-6682103 | MS.gene09641:intron | 35.0% | |
| GCTACACTTACATCATAACT+AGG | - | chr5.2:6681502-6681521 | MS.gene09641:intron | 35.0% | |
| GCTTGCATGGGAAAAAATTT+AGG | - | chr5.2:6683181-6683200 | MS.gene09641:intron | 35.0% | |
| GGTTTAACCTGAAATTTGAG+TGG | + | chr5.2:6682794-6682813 | None:intergenic | 35.0% | |
| GTAAGTGTAGCATAAAAAGC+TGG | + | chr5.2:6681493-6681512 | None:intergenic | 35.0% | |
| GTATCTGTGCTTACATTGTA+AGG | - | chr5.2:6680474-6680493 | MS.gene09641:intron | 35.0% | |
| GTCAAGTACTCAATTTCCTT+TGG | + | chr5.2:6682833-6682852 | None:intergenic | 35.0% | |
| GTGATTCGTTGTCATGAATT+TGG | - | chr5.2:6680267-6680286 | MS.gene09641:CDS | 35.0% | |
| TACCTCTCATAATCACTTAG+GGG | + | chr5.2:6684063-6684082 | None:intergenic | 35.0% | |
| TACTTCTGATATCAGTCACA+TGG | - | chr5.2:6680149-6680168 | MS.gene09641:intron | 35.0% | |
| TATGATGTCGTTAATACTCC+TGG | - | chr5.2:6680123-6680142 | MS.gene09641:intron | 35.0% | |
| TCAACTGTTTCATAAAGTGC+AGG | - | chr5.2:6683713-6683732 | MS.gene09641:intron | 35.0% | |
| TCACATATTGTATCGTAGTG+TGG | - | chr5.2:6682524-6682543 | MS.gene09641:intron | 35.0% | |
| TCACTTTATACGTGTAACTG+CGG | + | chr5.2:6681724-6681743 | None:intergenic | 35.0% | |
| TCTTTACCTATCAACTATGG+CGG | - | chr5.2:6682978-6682997 | MS.gene09641:intron | 35.0% | |
| TGAAAAACGTACCTTGAGAT+TGG | + | chr5.2:6679855-6679874 | None:intergenic | 35.0% | |
| TGACAGATCGCATACAAAAT+GGG | - | chr5.2:6682849-6682868 | MS.gene09641:CDS | 35.0% | |
| TGATTCAATTGGTTGCGTAA+TGG | + | chr5.2:6679893-6679912 | None:intergenic | 35.0% | |
| TGCATGTTGAACAATAGAGA+AGG | - | chr5.2:6681053-6681072 | MS.gene09641:intron | 35.0% | |
| TTAAAACTATGGCAGGGAAT+AGG | + | chr5.2:6683871-6683890 | None:intergenic | 35.0% | |
| TTGAACAATAGAGAAGGTCT+AGG | - | chr5.2:6681059-6681078 | MS.gene09641:intron | 35.0% | |
| TTGACAGATCGCATACAAAA+TGG | - | chr5.2:6682848-6682867 | MS.gene09641:CDS | 35.0% | |
| ! | AATTTTGTAGAGGCTTGCAT+GGG | - | chr5.2:6683169-6683188 | MS.gene09641:intron | 35.0% |
| ! | ACTTTTCCTACAAACAAAGG+AGG | + | chr5.2:6683094-6683113 | None:intergenic | 35.0% |
| ! | AGGATCTAAGACATCCTTTA+TGG | + | chr5.2:6683851-6683870 | None:intergenic | 35.0% |
| ! | AGGATTCAAAGTTGCGATTT+TGG | - | chr5.2:6680026-6680045 | MS.gene09641:CDS | 35.0% |
| ! | ATTTGGTAATCATTCCTGCT+GGG | - | chr5.2:6681202-6681221 | MS.gene09641:CDS | 35.0% |
| ! | CGTACTTTTGATGCAAAGAA+TGG | + | chr5.2:6684000-6684019 | None:intergenic | 35.0% |
| ! | GATTTTACCTCTTCTTTCTC+AGG | - | chr5.2:6682682-6682701 | MS.gene09641:CDS | 35.0% |
| ! | GGATTCAAAGTTGCGATTTT+GGG | - | chr5.2:6680027-6680046 | MS.gene09641:CDS | 35.0% |
| ! | GTAATCATATGTGTCGTTGT+TGG | - | chr5.2:6680415-6680434 | MS.gene09641:intron | 35.0% |
| ! | GTTGATGAAGATGAATCCAT+TGG | - | chr5.2:6680083-6680102 | MS.gene09641:intron | 35.0% |
| ! | TGACATGACTAAGACGATTT+TGG | - | chr5.2:6681120-6681139 | MS.gene09641:intron | 35.0% |
| ! | TTCTATGACATTGCTTGTTG+AGG | - | chr5.2:6682458-6682477 | MS.gene09641:intron | 35.0% |
| ! | TTTGCATCAAAAGTACGACT+TGG | - | chr5.2:6684003-6684022 | MS.gene09641:CDS | 35.0% |
| !! | AAGTGAAAGCGTTATCCAAT+GGG | + | chr5.2:6681873-6681892 | None:intergenic | 35.0% |
| !! | ATGTGCATATGTTGATTCAC+AGG | - | chr5.2:6683803-6683822 | MS.gene09641:intron | 35.0% |
| !!! | CTAAGACGATTTTGGTGTTT+AGG | - | chr5.2:6681128-6681147 | MS.gene09641:intron | 35.0% |
| !!! | TTTTTGTTTTAGGGCCTGTT+TGG | + | chr5.2:6681033-6681052 | None:intergenic | 35.0% |
| AAAGCTGGGCAGAAATTAGT+AGG | + | chr5.2:6681478-6681497 | None:intergenic | 40.0% | |
| AAGCAAAAGGAAGTTCGCAT+CGG | + | chr5.2:6681567-6681586 | None:intergenic | 40.0% | |
| AAGCATTCAAGCTTCGACTT+TGG | + | chr5.2:6683923-6683942 | None:intergenic | 40.0% | |
| AAGTTATGGGTCTTGATCCA+AGG | - | chr5.2:6682618-6682637 | MS.gene09641:CDS | 40.0% | |
| ACAGATCGCATACAAAATGG+GGG | - | chr5.2:6682851-6682870 | MS.gene09641:CDS | 40.0% | |
| AGACATCCTTTATGGAAAGC+AGG | + | chr5.2:6683843-6683862 | None:intergenic | 40.0% | |
| AGATCATCTCTTGTCATTCC+AGG | + | chr5.2:6681240-6681259 | None:intergenic | 40.0% | |
| AGCATTCAAGCTTCGACTTT+GGG | + | chr5.2:6683922-6683941 | None:intergenic | 40.0% | |
| AGGATCAATAGACATGGGTA+AGG | - | chr5.2:6682090-6682109 | MS.gene09641:intron | 40.0% | |
| AGTTATGGGTCTTGATCCAA+GGG | - | chr5.2:6682619-6682638 | MS.gene09641:CDS | 40.0% | |
| ATAGGAACAGTGGAGTTAAC+TGG | + | chr5.2:6681351-6681370 | None:intergenic | 40.0% | |
| ATCAATAGACATGGGTAAGG+AGG | - | chr5.2:6682093-6682112 | MS.gene09641:intron | 40.0% | |
| ATGTAAGCACAGATACTCCT+CGG | + | chr5.2:6680470-6680489 | None:intergenic | 40.0% | |
| ATGTTCGTATAACCACACGT+TGG | - | chr5.2:6681779-6681798 | MS.gene09641:intron | 40.0% | |
| ATTGCTTACGTGCTTAGGTA+TGG | - | chr5.2:6681824-6681843 | MS.gene09641:intron | 40.0% | |
| CAAAGTCCTGCTTTCCATAA+AGG | - | chr5.2:6683834-6683853 | MS.gene09641:intron | 40.0% | |
| CAGTTCAGAAGTTGGAATTC+TGG | - | chr5.2:6682343-6682362 | MS.gene09641:intron | 40.0% | |
| CCAACCATGTCCTTAGTATT+AGG | + | chr5.2:6682064-6682083 | None:intergenic | 40.0% | |
| CCTAATACTAAGGACATGGT+TGG | - | chr5.2:6682061-6682080 | MS.gene09641:intron | 40.0% | |
| CCTTGTTGGACCTAAAATTC+AGG | - | chr5.2:6682592-6682611 | MS.gene09641:CDS | 40.0% | |
| CGGTGATAGAAACTGGAATT+AGG | + | chr5.2:6682401-6682420 | None:intergenic | 40.0% | |
| CTGATATCAGAAGTAACACC+AGG | + | chr5.2:6680144-6680163 | None:intergenic | 40.0% | |
| CTGATCATGCTTGAAGCAAA+AGG | + | chr5.2:6681580-6681599 | None:intergenic | 40.0% | |
| GAAATCGGTCGCACATAAAA+TGG | + | chr5.2:6680853-6680872 | None:intergenic | 40.0% | |
| GAAATTCCTCAACTCCGTTA+CGG | + | chr5.2:6684029-6684048 | None:intergenic | 40.0% | |
| GACAGATCGCATACAAAATG+GGG | - | chr5.2:6682850-6682869 | MS.gene09641:CDS | 40.0% | |
| GAGGCTAATTGAATGTGAGT+TGG | - | chr5.2:6683126-6683145 | MS.gene09641:intron | 40.0% | |
| GCTAAATTGCTTACGTGCTT+AGG | - | chr5.2:6681819-6681838 | MS.gene09641:intron | 40.0% | |
| GGAGGGAATAATGGTAAAAG+GGG | - | chr5.2:6682111-6682130 | MS.gene09641:intron | 40.0% | |
| GTTGAGGAATTTCTTCCTCT+TGG | - | chr5.2:6684036-6684055 | MS.gene09641:CDS | 40.0% | |
| TAACTCCACTGTTCCTATTG+CGG | - | chr5.2:6681353-6681372 | MS.gene09641:CDS | 40.0% | |
| TATGATCCCAAGAGACTGTT+GGG | - | chr5.2:6681402-6681421 | MS.gene09641:CDS | 40.0% | |
| TATTGGGGTGAATTCCATGT+GGG | - | chr5.2:6680822-6680841 | MS.gene09641:intron | 40.0% | |
| TCAATAGACATGGGTAAGGA+GGG | - | chr5.2:6682094-6682113 | MS.gene09641:intron | 40.0% | |
| TCTGTCTTGGTGGAATGTAT+CGG | - | chr5.2:6683265-6683284 | MS.gene09641:intron | 40.0% | |
| TGCACTTACAGGTATGGATT+TGG | - | chr5.2:6681185-6681204 | MS.gene09641:CDS | 40.0% | |
| TGGATCTGCAACACTATCAA+TGG | - | chr5.2:6683436-6683455 | MS.gene09641:intron | 40.0% | |
| TGTAATTCTGGCACTACTGA+TGG | + | chr5.2:6680653-6680672 | None:intergenic | 40.0% | |
| TGTTCAACGACAACTGTTAG+TGG | + | chr5.2:6684091-6684110 | None:intergenic | 40.0% | |
| TTATGATCCCAAGAGACTGT+TGG | - | chr5.2:6681401-6681420 | MS.gene09641:CDS | 40.0% | |
| TTATTGGGGTGAATTCCATG+TGG | - | chr5.2:6680821-6680840 | MS.gene09641:intron | 40.0% | |
| ! | AATTTTCTCTAGGCCAAAGC+TGG | - | chr5.2:6683410-6683429 | MS.gene09641:intron | 40.0% |
| ! | AGAAACTGGGTTGGAAAGAA+TGG | - | chr5.2:6682249-6682268 | MS.gene09641:intron | 40.0% |
| ! | GAAACTGGGTTGGAAAGAAT+GGG | - | chr5.2:6682250-6682269 | MS.gene09641:intron | 40.0% |
| ! | GAATTTTGTAGAGGCTTGCA+TGG | - | chr5.2:6683168-6683187 | MS.gene09641:intron | 40.0% |
| ! | GATTTGGTAATCATTCCTGC+TGG | - | chr5.2:6681201-6681220 | MS.gene09641:CDS | 40.0% |
| ! | GCTTGTTGCTAACTCTTTCT+TGG | + | chr5.2:6684199-6684218 | None:intergenic | 40.0% |
| ! | GTTTAGGTTCGAGGATTCTT+GGG | - | chr5.2:6681144-6681163 | MS.gene09641:intron | 40.0% |
| ! | TGTTTAGGTTCGAGGATTCT+TGG | - | chr5.2:6681143-6681162 | MS.gene09641:intron | 40.0% |
| ! | TTTAGGTTCGAGGATTCTTG+GGG | - | chr5.2:6681145-6681164 | MS.gene09641:intron | 40.0% |
| ! | TTTGGTAATCATTCCTGCTG+GGG | - | chr5.2:6681203-6681222 | MS.gene09641:CDS | 40.0% |
| !! | AATTTCCTTTGGGGTGAAAG+AGG | + | chr5.2:6682822-6682841 | None:intergenic | 40.0% |
| !! | CAAGTGAAAGCGTTATCCAA+TGG | + | chr5.2:6681874-6681893 | None:intergenic | 40.0% |
| !! | CCTGAATTTTAGGTCCAACA+AGG | + | chr5.2:6682595-6682614 | None:intergenic | 40.0% |
| !! | GCATATGTTGATTCACAGGT+AGG | - | chr5.2:6683807-6683826 | MS.gene09641:intron | 40.0% |
| !!! | GAAAAGTTTTGAGACTCGAG+AGG | - | chr5.2:6683107-6683126 | MS.gene09641:intron | 40.0% |
| !!! | GATTTTGGTGTTTAGGTTCG+AGG | - | chr5.2:6681135-6681154 | MS.gene09641:intron | 40.0% |
| AAACGTACCTTGAGATTGGG+AGG | + | chr5.2:6679851-6679870 | None:intergenic | 45.0% | |
| AAGGACATGGTTGGGAATAG+AGG | - | chr5.2:6682070-6682089 | MS.gene09641:intron | 45.0% | |
| AATGTTCATTGCCGTGCCAA+AGG | - | chr5.2:6679994-6680013 | MS.gene09641:CDS | 45.0% | |
| ACCTCTGCCACTCAAATTTC+AGG | - | chr5.2:6682784-6682803 | MS.gene09641:CDS | 45.0% | |
| ACCTGAAATTTGAGTGGCAG+AGG | + | chr5.2:6682788-6682807 | None:intergenic | 45.0% | |
| AGCTTAGAACAATGCTGAGC+TGG | - | chr5.2:6682148-6682167 | MS.gene09641:intron | 45.0% | |
| ATGTGGATGTTCCTGTTGTC+GGG | - | chr5.2:6682642-6682661 | MS.gene09641:CDS | 45.0% | |
| ATGTTCATTGCCGTGCCAAA+GGG | - | chr5.2:6679995-6680014 | MS.gene09641:CDS | 45.0% | |
| ATTCTGGCACTACTGATGGA+AGG | + | chr5.2:6680649-6680668 | None:intergenic | 45.0% | |
| CAACAGGGCAAGTTTGGAAA+AGG | - | chr5.2:6684173-6684192 | MS.gene09641:intron | 45.0% | |
| CAATCTTGATCACCAACGTG+TGG | + | chr5.2:6681794-6681813 | None:intergenic | 45.0% | |
| CATGGGTAAGGAGGGAATAA+TGG | - | chr5.2:6682102-6682121 | MS.gene09641:intron | 45.0% | |
| CTACACACAGAGAGTGGTAT+CGG | - | chr5.2:6681903-6681922 | MS.gene09641:intron | 45.0% | |
| CTTGTCATTCCAGGTTTACG+AGG | + | chr5.2:6681231-6681250 | None:intergenic | 45.0% | |
| GAAAGAGTTAGCAACAAGCG+TGG | - | chr5.2:6684200-6684219 | MS.gene09641:CDS | 45.0% | |
| GACAATGCTTGACGTGGTTA+GGG | - | chr5.2:6681428-6681447 | MS.gene09641:intron | 45.0% | |
| GACCCCTAATACTAAGGACA+TGG | - | chr5.2:6682057-6682076 | MS.gene09641:intron | 45.0% | |
| GACGTAACGGTGATAGAAAC+TGG | + | chr5.2:6682408-6682427 | None:intergenic | 45.0% | |
| GATGTGGATGTTCCTGTTGT+CGG | - | chr5.2:6682641-6682660 | MS.gene09641:CDS | 45.0% | |
| GATTGCAAAGCGATGTCCTA+AGG | - | chr5.2:6681302-6681321 | MS.gene09641:intron | 45.0% | |
| GGACTAACAAAGTCTGTCGT+AGG | - | chr5.2:6683963-6683982 | MS.gene09641:CDS | 45.0% | |
| GTCCCCTAAGTGATTATGAG+AGG | - | chr5.2:6684058-6684077 | MS.gene09641:CDS | 45.0% | |
| TAATCACTTAGGGGACCAAG+AGG | + | chr5.2:6684054-6684073 | None:intergenic | 45.0% | |
| TACACACAGAGAGTGGTATC+GGG | - | chr5.2:6681904-6681923 | MS.gene09641:intron | 45.0% | |
| TATCGGACACGACATAGACA+CGG | - | chr5.2:6680356-6680375 | MS.gene09641:intron | 45.0% | |
| TGACAATGCTTGACGTGGTT+AGG | - | chr5.2:6681427-6681446 | MS.gene09641:intron | 45.0% | |
| TGAGGATGCACTTACAGGTA+TGG | - | chr5.2:6681179-6681198 | MS.gene09641:CDS | 45.0% | |
| TTAGCAACAAGCGTGGAGAA+GGG | - | chr5.2:6684207-6684226 | MS.gene09641:CDS | 45.0% | |
| TTCAGACCGCCATAGTTGAT+AGG | + | chr5.2:6682987-6683006 | None:intergenic | 45.0% | |
| TTGAAAACCTCAGCCGCAAT+AGG | + | chr5.2:6681369-6681388 | None:intergenic | 45.0% | |
| ! | AAAGTACGACTTGGCCGTAA+CGG | - | chr5.2:6684012-6684031 | MS.gene09641:CDS | 45.0% |
| ! | ATATGTGCCACTGTTGTGTC+TGG | - | chr5.2:6680620-6680639 | MS.gene09641:intron | 45.0% |
| ! | GCTGAGGTTTTCAAAAGAGC+TGG | - | chr5.2:6681375-6681394 | MS.gene09641:CDS | 45.0% |
| ! | GTGTCCCACACTTTGGAAAT+CGG | + | chr5.2:6680868-6680887 | None:intergenic | 45.0% |
| ! | TCCTCGGATTAGGAGTGTAA+CGG | + | chr5.2:6680454-6680473 | None:intergenic | 45.0% |
| ! | TGCACTCCTCCTTTGTTTGT+AGG | - | chr5.2:6683085-6683104 | MS.gene09641:intron | 45.0% |
| !! | CACACGTTGGTGATCAAGAT+TGG | - | chr5.2:6681792-6681811 | MS.gene09641:intron | 45.0% |
| AAGGACACCAGACACAACAG+TGG | + | chr5.2:6680630-6680649 | None:intergenic | 50.0% | |
| ACAGGAACATCCACATCCCT+TGG | + | chr5.2:6682638-6682657 | None:intergenic | 50.0% | |
| ACCTTCCTCTTTCACCCCAA+AGG | - | chr5.2:6682814-6682833 | MS.gene09641:CDS | 50.0% | |
| ACGTAATGACAGGAAGGGTG+AGG | - | chr5.2:6682220-6682239 | MS.gene09641:intron | 50.0% | |
| AGAACAATGCTGAGCTGGCA+AGG | - | chr5.2:6682153-6682172 | MS.gene09641:intron | 50.0% | |
| CAGCTTGAGGATGCACTTAC+AGG | - | chr5.2:6681174-6681193 | MS.gene09641:CDS | 50.0% | |
| CCTCAATCCTCCCAATCTCA+AGG | - | chr5.2:6679841-6679860 | MS.gene09641:CDS | 50.0% | |
| CCTTGAGATTGGGAGGATTG+AGG | + | chr5.2:6679844-6679863 | None:intergenic | 50.0% | |
| CTTGGGGCAAAATCAGCTTG+AGG | - | chr5.2:6681161-6681180 | MS.gene09641:CDS | 50.0% | |
| GCACAGATACTCCTCGGATT+AGG | + | chr5.2:6680464-6680483 | None:intergenic | 50.0% | |
| GCATGTCTTCGTGCGTTGAA+AGG | - | chr5.2:6683762-6683781 | MS.gene09641:intron | 50.0% | |
| GGTTAGGGCCAATACGTTTG+TGG | - | chr5.2:6681443-6681462 | MS.gene09641:intron | 50.0% | |
| GTCACTCCCAACAGTCTCTT+GGG | + | chr5.2:6681411-6681430 | None:intergenic | 50.0% | |
| GTGCAGACCTGAGAAAGAAG+AGG | + | chr5.2:6682692-6682711 | None:intergenic | 50.0% | |
| GTTAGCAACAAGCGTGGAGA+AGG | - | chr5.2:6684206-6684225 | MS.gene09641:CDS | 50.0% | |
| TCCGTTACACTCCTAATCCG+AGG | - | chr5.2:6680450-6680469 | MS.gene09641:intron | 50.0% | |
| TCTTCGTGCGTTGAAAGGAG+AGG | - | chr5.2:6683767-6683786 | MS.gene09641:intron | 50.0% | |
| TGAGATTGGGAGGATTGAGG+TGG | + | chr5.2:6679841-6679860 | None:intergenic | 50.0% | |
| TGGGGGAACAGAAGTTGTTG+AGG | - | chr5.2:6682868-6682887 | MS.gene09641:CDS | 50.0% | |
| TGTCACTCCCAACAGTCTCT+TGG | + | chr5.2:6681412-6681431 | None:intergenic | 50.0% | |
| TGTGGATGTTCCTGTTGTCG+GGG | - | chr5.2:6682643-6682662 | MS.gene09641:CDS | 50.0% | |
| TGTTCATTGCCGTGCCAAAG+GGG | - | chr5.2:6679996-6680015 | MS.gene09641:CDS | 50.0% | |
| ! | CACTTGCTACACACAGAGAG+TGG | - | chr5.2:6681897-6681916 | MS.gene09641:intron | 50.0% |
| ! | CGTGCTTAGGTATGGTTCTG+TGG | - | chr5.2:6681832-6681851 | MS.gene09641:intron | 50.0% |
| ! | GCGACCGATTTCCAAAGTGT+GGG | - | chr5.2:6680861-6680880 | MS.gene09641:intron | 50.0% |
| ! | TGCGACCGATTTCCAAAGTG+TGG | - | chr5.2:6680860-6680879 | MS.gene09641:intron | 50.0% |
| ! | TTTGGGGTGAAAGAGGAAGG+TGG | + | chr5.2:6682815-6682834 | None:intergenic | 50.0% |
| !! | TCCTTTGGGGTGAAAGAGGA+AGG | + | chr5.2:6682818-6682837 | None:intergenic | 50.0% |
| AATGACAGGAAGGGTGAGGC+TGG | - | chr5.2:6682224-6682243 | MS.gene09641:intron | 55.0% | |
| AGCAGAGAGGCTGGAGTAGT+AGG | - | chr5.2:6683056-6683075 | MS.gene09641:intron | 55.0% | |
| AGCTGGCAAGGAGTTGTGGA+TGG | - | chr5.2:6682165-6682184 | MS.gene09641:intron | 55.0% | |
| ATGACAGGAAGGGTGAGGCT+GGG | - | chr5.2:6682225-6682244 | MS.gene09641:intron | 55.0% | |
| ATTGGGAGGATTGAGGTGGC+TGG | + | chr5.2:6679837-6679856 | None:intergenic | 55.0% | |
| CACTGTTCCTATTGCGGCTG+AGG | - | chr5.2:6681359-6681378 | MS.gene09641:CDS | 55.0% | |
| CTCAGCCGCAATAGGAACAG+TGG | + | chr5.2:6681361-6681380 | None:intergenic | 55.0% | |
| GAATCCTGGTGATCCCCCTT+TGG | + | chr5.2:6680013-6680032 | None:intergenic | 55.0% | |
| GGGAGTGACAATGCTTGACG+TGG | - | chr5.2:6681422-6681441 | MS.gene09641:intron | 55.0% | |
| GGGTCTTGATCCAAGGGATG+TGG | - | chr5.2:6682625-6682644 | MS.gene09641:CDS | 55.0% | |
| GTGGATGTTCCTGTTGTCGG+GGG | - | chr5.2:6682644-6682663 | MS.gene09641:CDS | 55.0% | |
| GTTCATTGCCGTGCCAAAGG+GGG | - | chr5.2:6679997-6680016 | MS.gene09641:CDS | 55.0% | |
| TCAAGGCGTGTCCCACACTT+TGG | + | chr5.2:6680875-6680894 | None:intergenic | 55.0% | |
| TGCAGATCCAGCTCCAGCTT+TGG | + | chr5.2:6683426-6683445 | None:intergenic | 55.0% | |
| ! | ACTTGGCCGTAACGGAGTTG+AGG | - | chr5.2:6684020-6684039 | MS.gene09641:CDS | 55.0% |
| !! | GTTGCGATTTTGGGTGCTGC+TGG | - | chr5.2:6680036-6680055 | MS.gene09641:CDS | 55.0% |
| AGGCTGGGCAGAAACTGGGT+TGG | - | chr5.2:6682240-6682259 | MS.gene09641:intron | 60.0% | |
| CTCTAGGCCAAAGCTGGAGC+TGG | - | chr5.2:6683416-6683435 | MS.gene09641:intron | 60.0% | |
| CTGGTGATCCCCCTTTGGCA+CGG | + | chr5.2:6680008-6680027 | None:intergenic | 60.0% | |
| GCTGAGCTGGCAAGGAGTTG+TGG | - | chr5.2:6682161-6682180 | MS.gene09641:intron | 60.0% | |
| GCTGGGGTTCCTCGTAAACC+TGG | - | chr5.2:6681219-6681238 | MS.gene09641:intron | 60.0% | |
| GGTGAGGCTGGGCAGAAACT+GGG | - | chr5.2:6682236-6682255 | MS.gene09641:intron | 60.0% | |
| GGTGGTGAGAGACAGCAGAG+AGG | - | chr5.2:6683043-6683062 | MS.gene09641:intron | 60.0% | |
| GGTTTACGAGGAACCCCAGC+AGG | + | chr5.2:6681219-6681238 | None:intergenic | 60.0% | |
| GTGAGAGACAGCAGAGAGGC+TGG | - | chr5.2:6683047-6683066 | MS.gene09641:intron | 60.0% | |
| !! | TTGGGTGCTGCTGGTGGCAT+AGG | - | chr5.2:6680045-6680064 | MS.gene09641:intron | 60.0% |
| !!! | GCGATTTTGGGTGCTGCTGG+TGG | - | chr5.2:6680039-6680058 | MS.gene09641:intron | 60.0% |
| CCTGTTGTCGGGGGACATGC+CGG | - | chr5.2:6682653-6682672 | MS.gene09641:CDS | 65.0% | |
| CGTGCCAAAGGGGGATCACC+AGG | - | chr5.2:6680006-6680025 | MS.gene09641:CDS | 65.0% | |
| GGGTGAGGCTGGGCAGAAAC+TGG | - | chr5.2:6682235-6682254 | MS.gene09641:intron | 65.0% | |
| CCGGCATGTCCCCCGACAAC+AGG | + | chr5.2:6682656-6682675 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 6679791 | 6684251 | 6679791 | ID=MS.gene09641 |
| chr5.2 | mRNA | 6679791 | 6684251 | 6679791 | ID=MS.gene09641.t1;Parent=MS.gene09641 |
| chr5.2 | exon | 6684180 | 6684251 | 6684180 | ID=MS.gene09641.t1.exon1;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6684180 | 6684251 | 6684180 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| chr5.2 | exon | 6683857 | 6684078 | 6683857 | ID=MS.gene09641.t1.exon2;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6683857 | 6684078 | 6683857 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| chr5.2 | exon | 6682578 | 6682892 | 6682578 | ID=MS.gene09641.t1.exon3;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6682578 | 6682892 | 6682578 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| chr5.2 | exon | 6681339 | 6681428 | 6681339 | ID=MS.gene09641.t1.exon4;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6681339 | 6681428 | 6681339 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| chr5.2 | exon | 6681153 | 6681236 | 6681153 | ID=MS.gene09641.t1.exon5;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6681153 | 6681236 | 6681153 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| chr5.2 | exon | 6680585 | 6680620 | 6680585 | ID=MS.gene09641.t1.exon6;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6680585 | 6680620 | 6680585 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| chr5.2 | exon | 6680218 | 6680307 | 6680218 | ID=MS.gene09641.t1.exon7;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6680218 | 6680307 | 6680218 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| chr5.2 | exon | 6679963 | 6680057 | 6679963 | ID=MS.gene09641.t1.exon8;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6679963 | 6680057 | 6679963 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| chr5.2 | exon | 6679791 | 6679863 | 6679791 | ID=MS.gene09641.t1.exon9;Parent=MS.gene09641.t1 |
| chr5.2 | CDS | 6679791 | 6679863 | 6679791 | ID=cds.MS.gene09641.t1;Parent=MS.gene09641.t1 |
| Gene Sequence |
| Protein sequence |
