Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09929.t1 | XP_003611237.2 | 97.2 | 499 | 14 | 0 | 1 | 499 | 1 | 499 | 1.30E-294 | 1021.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09929.t1 | Q9SB00 | 73.8 | 481 | 118 | 4 | 13 | 486 | 6 | 485 | 2.9e-218 | 759.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09929.t1 | G7KG67 | 97.2 | 499 | 14 | 0 | 1 | 499 | 1 | 499 | 9.2e-295 | 1021.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene09929 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene09929 | 0.812955 | 3.27E-51 | -1.69E-46 |
| MS.gene050133 | MS.gene09929 | -0.815935 | 7.16E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene09929 | -0.838424 | 2.90E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene09929 | 0.809992 | 1.44E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene09929 | 0.802452 | 5.57E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene09929 | 0.807412 | 5.12E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene09929 | 0.846602 | 1.96E-59 | -1.69E-46 |
| MS.gene052589 | MS.gene09929 | 0.805743 | 1.15E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene09929 | 0.826953 | 2.04E-54 | -1.69E-46 |
| MS.gene054884 | MS.gene09929 | -0.801325 | 9.50E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene09929 | 0.848012 | 8.04E-60 | -1.69E-46 |
| MS.gene05556 | MS.gene09929 | 0.802412 | 5.68E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene09929 | 0.825905 | 3.63E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene09929 | 0.833849 | 4.21E-56 | -1.69E-46 |
| MS.gene059512 | MS.gene09929 | 0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene09929 | 0.860397 | 2.13E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09929.t1 | MTR_5g011780 | 97.194 | 499 | 14 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1019 |
| MS.gene09929.t1 | MTR_5g011780 | 97.032 | 438 | 13 | 0 | 1 | 438 | 1 | 438 | 0.0 | 895 |
| MS.gene09929.t1 | MTR_5g011780 | 97.025 | 437 | 13 | 0 | 1 | 437 | 1 | 437 | 0.0 | 892 |
| MS.gene09929.t1 | MTR_5g011780 | 96.852 | 413 | 13 | 0 | 1 | 413 | 1 | 413 | 0.0 | 838 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09929.t1 | AT1G12370 | 73.805 | 481 | 118 | 4 | 13 | 486 | 6 | 485 | 0.0 | 760 |
| MS.gene09929.t1 | AT1G12370 | 72.557 | 481 | 118 | 5 | 13 | 486 | 6 | 479 | 0.0 | 740 |
| MS.gene09929.t1 | AT1G12370 | 68.191 | 481 | 115 | 5 | 13 | 486 | 6 | 455 | 0.0 | 684 |
Find 117 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCTTCACTTCTCTTAA+AGG | 0.077903 | 5.1:-5181996 | None:intergenic |
| CTCACAATGTTGTGCCTCTT+TGG | 0.134190 | 5.1:+5182075 | MS.gene09929:CDS |
| TTATCTCCCTATTTGCATTT+TGG | 0.174359 | 5.1:+5182627 | MS.gene09929:CDS |
| TGTAAACCAACTGCACTTTC+TGG | 0.198914 | 5.1:+5182603 | MS.gene09929:CDS |
| AAAATGGATTCTTGACTAAA+AGG | 0.235044 | 5.1:+5182547 | MS.gene09929:CDS |
| ATCAACGGTTGAAAGATAAT+TGG | 0.241349 | 5.1:+5181267 | MS.gene09929:CDS |
| GGTGCAAAGGCGCGTCATTT+AGG | 0.258100 | 5.1:+5181371 | MS.gene09929:CDS |
| ATATACCCGAACTAAGAAAA+AGG | 0.271526 | 5.1:-5181453 | None:intergenic |
| TATCTGTCCAAAATGCAAAT+AGG | 0.281173 | 5.1:-5182634 | None:intergenic |
| GTGCAAAGGCGCGTCATTTA+GGG | 0.286664 | 5.1:+5181372 | MS.gene09929:CDS |
| TCATTTAGGGTTTATGCTTA+AGG | 0.317150 | 5.1:+5181385 | MS.gene09929:CDS |
| AGTATAGTGCTAGAACAATA+AGG | 0.328544 | 5.1:+5182117 | MS.gene09929:CDS |
| TTTCTTGTACAGAATGTATT+GGG | 0.328825 | 5.1:+5183438 | MS.gene09929:intron |
| TCACAATGTTGTGCCTCTTT+GGG | 0.330219 | 5.1:+5182076 | MS.gene09929:CDS |
| TTGTGAGAGGGTTAGTGATT+TGG | 0.348183 | 5.1:+5182031 | MS.gene09929:CDS |
| GGGTTCACCGACGGCGAAAT+TGG | 0.356744 | 5.1:-5181176 | None:intergenic |
| CATTTAGGGTTTATGCTTAA+GGG | 0.367715 | 5.1:+5181386 | MS.gene09929:CDS |
| CAATTGGAGATGGTTCACTA+TGG | 0.369299 | 5.1:+5183219 | MS.gene09929:CDS |
| ATCTGTCCAAAATGCAAATA+GGG | 0.371421 | 5.1:-5182633 | None:intergenic |
| AAAGGCTGTAGATACTTTCT+TGG | 0.380747 | 5.1:+5182814 | MS.gene09929:intron |
| GCTTTGGAATGCTTCTCAAT+TGG | 0.384572 | 5.1:+5183203 | MS.gene09929:intron |
| GCAGTTGGTGGTTCGACATC+AGG | 0.385393 | 5.1:-5182182 | None:intergenic |
| AGAATGTGGAGCTTCACTTT+TGG | 0.385826 | 5.1:+5181959 | MS.gene09929:CDS |
| TTGGGTTGCTTCTGAGAAGT+TGG | 0.386676 | 5.1:+5182094 | MS.gene09929:CDS |
| CGAACCACCAACTGCGAAAT+GGG | 0.396211 | 5.1:+5182190 | MS.gene09929:CDS |
| CGGACCTTGAAAGAAGGTTC+TGG | 0.405636 | 5.1:+5181209 | MS.gene09929:CDS |
| CGGTGAACCCTGGTCGCATT+CGG | 0.415152 | 5.1:+5181189 | MS.gene09929:CDS |
| AAACGGGTCCCGTCGTGTAC+TGG | 0.419132 | 5.1:+5181234 | MS.gene09929:CDS |
| GGCTCACACCAATCCACTTC+AGG | 0.422837 | 5.1:-5182486 | None:intergenic |
| CATATCTCAAGTGCTTCTTC+AGG | 0.423566 | 5.1:-5183490 | None:intergenic |
| ATATCATTGCTCAAGTGTTA+AGG | 0.423610 | 5.1:+5182246 | MS.gene09929:CDS |
| GCATATGTTAATAAAATAGT+TGG | 0.424168 | 5.1:+5184129 | MS.gene09929:CDS |
| GGAAAATTTGCTATCTGAAA+AGG | 0.425354 | 5.1:+5184173 | MS.gene09929:CDS |
| GTATAGTGCTAGAACAATAA+GGG | 0.425923 | 5.1:+5182118 | MS.gene09929:CDS |
| TCCATTGCAGCAATTTCTCC+AGG | 0.429563 | 5.1:-5182507 | None:intergenic |
| TCGAACCACCAACTGCGAAA+TGG | 0.431415 | 5.1:+5182189 | MS.gene09929:CDS |
| AACAACGGCAACAGGAACTT+TGG | 0.432053 | 5.1:-5181324 | None:intergenic |
| GAAAGTGCAGTTGGTTTACA+AGG | 0.434713 | 5.1:-5182600 | None:intergenic |
| GGCGAAATTGGCGGCGGCGA+CGG | 0.439771 | 5.1:-5181164 | None:intergenic |
| TTCTTACAGAAGGGAGCAGT+TGG | 0.440949 | 5.1:+5183040 | MS.gene09929:intron |
| TGCTGCAATGGAAGTGTTGA+TGG | 0.442384 | 5.1:+5182518 | MS.gene09929:CDS |
| TCTTGGAGGAGTTGATTGTT+CGG | 0.444155 | 5.1:+5182831 | MS.gene09929:CDS |
| ATCAGAGGCGTGGTCGAGTA+AGG | 0.459791 | 5.1:-5182933 | None:intergenic |
| TCAACGGTTGAAAGATAATT+GGG | 0.460189 | 5.1:+5181268 | MS.gene09929:CDS |
| ATAAAATAGTTGGTGAGCTC+AGG | 0.462164 | 5.1:+5184139 | MS.gene09929:CDS |
| TATATGTGGGGTACATGATC+AGG | 0.462446 | 5.1:+5183695 | MS.gene09929:CDS |
| ATTCGATACATGAATTATGA+AGG | 0.471243 | 5.1:+5184072 | MS.gene09929:CDS |
| CACCTGACTGCAGTATGAAA+TGG | 0.471472 | 5.1:+5183632 | MS.gene09929:intron |
| CTGAGGACCATGTCATAGAC+TGG | 0.473064 | 5.1:+5182219 | MS.gene09929:CDS |
| CCTCATTACGATTCATTACA+AGG | 0.477130 | 5.1:+5182887 | MS.gene09929:CDS |
| ATGTATATATTTAAATGATA+AGG | 0.477258 | 5.1:+5183510 | MS.gene09929:CDS |
| TCAAAGTTTGTTAGAGAATG+TGG | 0.480840 | 5.1:+5181945 | MS.gene09929:CDS |
| CGCATTCGGACCTTGAAAGA+AGG | 0.484903 | 5.1:+5181203 | MS.gene09929:CDS |
| GAAGTGGATTGGTGTGAGCC+TGG | 0.486895 | 5.1:+5182489 | MS.gene09929:CDS |
| GGCTGTAGATACTTTCTTGG+AGG | 0.488828 | 5.1:+5182817 | MS.gene09929:intron |
| TTCAAGGTCCGAATGCGACC+AGG | 0.496662 | 5.1:-5181197 | None:intergenic |
| GTACATGTTCTTCAATCCTC+AGG | 0.499954 | 5.1:-5184219 | None:intergenic |
| ATGACCCATTTCGCAGTTGG+TGG | 0.500881 | 5.1:-5182194 | None:intergenic |
| GCTACGAGCTTCATATCCTC+AGG | 0.510731 | 5.1:+5182689 | MS.gene09929:CDS |
| GAATGCTTCTCAATTGGAGA+TGG | 0.517008 | 5.1:+5183209 | MS.gene09929:CDS |
| CTGAGGTTCCTGAAGTGGAT+TGG | 0.525623 | 5.1:+5182478 | MS.gene09929:CDS |
| GTGATGACCCATTTCGCAGT+TGG | 0.526232 | 5.1:-5182197 | None:intergenic |
| CATTACAAGGAGCATGGGAG+TGG | 0.527272 | 5.1:+5182900 | MS.gene09929:CDS |
| GGCTGCATGTGGTCTATATG+TGG | 0.531306 | 5.1:+5183681 | MS.gene09929:CDS |
| ACGATTCATTACAAGGAGCA+TGG | 0.534155 | 5.1:+5182894 | MS.gene09929:CDS |
| CGATTCATTACAAGGAGCAT+GGG | 0.538381 | 5.1:+5182895 | MS.gene09929:CDS |
| GCCGCCGCCAATTTCGCCGT+CGG | 0.538485 | 5.1:+5181169 | MS.gene09929:CDS |
| GCCTGGAGAAATTGCTGCAA+TGG | 0.546282 | 5.1:+5182506 | MS.gene09929:CDS |
| GCTGAAGTTGGTGACACAAT+TGG | 0.547069 | 5.1:-5181415 | None:intergenic |
| TGGAGCTGAGGTTCCTGAAG+TGG | 0.548511 | 5.1:+5182473 | MS.gene09929:CDS |
| CAGAAGGGAGCAGTTGGAGA+AGG | 0.554367 | 5.1:+5183046 | MS.gene09929:intron |
| TATATTATAGGGTGAGGCGG+AGG | 0.555525 | 5.1:+5181914 | MS.gene09929:intron |
| ACAAGGGTTATTGCGATCTG+TGG | 0.555752 | 5.1:-5182583 | None:intergenic |
| CTAAATTAGGAGTGGAGCTG+AGG | 0.557965 | 5.1:+5182461 | MS.gene09929:intron |
| AGGGATCCAAGTGGTTATAA+CGG | 0.559170 | 5.1:+5183660 | MS.gene09929:CDS |
| AATTGGAGATGGTTCACTAT+GGG | 0.559765 | 5.1:+5183220 | MS.gene09929:CDS |
| CAAATCTGAGATTTGTGAGA+GGG | 0.564185 | 5.1:+5182019 | MS.gene09929:CDS |
| TTCACCGACGGCGAAATTGG+CGG | 0.565213 | 5.1:-5181173 | None:intergenic |
| GCAAATCTGAGATTTGTGAG+AGG | 0.567196 | 5.1:+5182018 | MS.gene09929:CDS |
| TATGAAGAGAATGCTGAAGT+TGG | 0.570021 | 5.1:-5181427 | None:intergenic |
| TTCTCAGAAGCAACCCAAAG+AGG | 0.571605 | 5.1:-5182089 | None:intergenic |
| ATTTCGCCGTCGGTGAACCC+TGG | 0.573219 | 5.1:+5181179 | MS.gene09929:CDS |
| CTGAACATCCAGTACACGAC+GGG | 0.574855 | 5.1:-5181242 | None:intergenic |
| AATTGGCGGCGGCGACGGTG+TGG | 0.579274 | 5.1:-5181159 | None:intergenic |
| GATAAACCAGAAAGTGCAGT+TGG | 0.580556 | 5.1:-5182609 | None:intergenic |
| GGGCAAAGAAGATACTTGAA+TGG | 0.580989 | 5.1:+5183458 | MS.gene09929:CDS |
| TTCGATACATGAATTATGAA+GGG | 0.582152 | 5.1:+5184073 | MS.gene09929:CDS |
| AAGATACTTGAATGGACAAG+AGG | 0.585996 | 5.1:+5183466 | MS.gene09929:CDS |
| GCAGTATGAAATGGATGGGA+GGG | 0.599361 | 5.1:+5183641 | MS.gene09929:intron |
| ACCGACGGCGAAATTGGCGG+CGG | 0.601194 | 5.1:-5181170 | None:intergenic |
| TCAAGGTCCGAATGCGACCA+GGG | 0.604948 | 5.1:-5181196 | None:intergenic |
| CCTTGTAATGAATCGTAATG+AGG | 0.611817 | 5.1:-5182887 | None:intergenic |
| GACTGCAGTATGAAATGGAT+GGG | 0.612359 | 5.1:+5183637 | MS.gene09929:intron |
| GTTCACTATGGGAAAATGCA+CGG | 0.616114 | 5.1:+5183231 | MS.gene09929:CDS |
| TATAGTGCTAGAACAATAAG+GGG | 0.617876 | 5.1:+5182119 | MS.gene09929:CDS |
| ATGCAGCCGTTATAACCACT+TGG | 0.618854 | 5.1:-5183666 | None:intergenic |
| ATTACAAGGAGCATGGGAGT+GGG | 0.625049 | 5.1:+5182901 | MS.gene09929:CDS |
| GTGGTTATAACGGCTGCATG+TGG | 0.626227 | 5.1:+5183670 | MS.gene09929:CDS |
| GCTGCATGTGGTCTATATGT+GGG | 0.627943 | 5.1:+5183682 | MS.gene09929:CDS |
| AACATGTGGTCGCTTATCAG+AGG | 0.633768 | 5.1:-5182948 | None:intergenic |
| ATGCGACCAGGGTTCACCGA+CGG | 0.638577 | 5.1:-5181185 | None:intergenic |
| AAAGTGCAGTTGGTTTACAA+GGG | 0.645680 | 5.1:-5182599 | None:intergenic |
| GCTGCAATGGAAGTGTTGAT+GGG | 0.650703 | 5.1:+5182519 | MS.gene09929:CDS |
| TGCAGTATGAAATGGATGGG+AGG | 0.651233 | 5.1:+5183640 | MS.gene09929:intron |
| TGAGGACCATGTCATAGACT+GGG | 0.652891 | 5.1:+5182220 | MS.gene09929:CDS |
| CTGCATGTGGTCTATATGTG+GGG | 0.661411 | 5.1:+5183683 | MS.gene09929:CDS |
| TGACTGCAGTATGAAATGGA+TGG | 0.661718 | 5.1:+5183636 | MS.gene09929:intron |
| ACTCCGCTGTTGTAATCCTG+AGG | 0.667646 | 5.1:+5184203 | MS.gene09929:CDS |
| TATCATCCCAGTCTATGACA+TGG | 0.679585 | 5.1:-5182226 | None:intergenic |
| GTGGTCGCTTATCAGAGGCG+TGG | 0.687884 | 5.1:-5182943 | None:intergenic |
| AATCCTCAGGATTACAACAG+CGG | 0.707260 | 5.1:-5184206 | None:intergenic |
| ACTGGATGTTCAGAGATCAA+CGG | 0.717235 | 5.1:+5181252 | MS.gene09929:CDS |
| TCTGAACATCCAGTACACGA+CGG | 0.720409 | 5.1:-5181243 | None:intergenic |
| TGCGAAATGGGTCATCACTG+AGG | 0.720581 | 5.1:+5182202 | MS.gene09929:CDS |
| TGAGCTCAGGAAGAGAAAAG+CGG | 0.732170 | 5.1:+5184152 | MS.gene09929:CDS |
| GTGACTCACGTGTAAACATG+TGG | 0.733331 | 5.1:-5182962 | None:intergenic |
| ATGGATGGGAGGGATCCAAG+TGG | 0.761782 | 5.1:+5183651 | MS.gene09929:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTATATTAT+AGG | + | chr5.1:5181902-5181921 | MS.gene09929:intron | 0.0% |
| !!! | TTTTTTTTTTTTATATTATA+GGG | + | chr5.1:5181903-5181922 | MS.gene09929:intron | 0.0% |
| !! | AAAATTCAAATTTCAATTAT+AGG | + | chr5.1:5181500-5181519 | MS.gene09929:intron | 10.0% |
| !! | ATGTATATATTTAAATGATA+AGG | + | chr5.1:5183510-5183529 | MS.gene09929:CDS | 10.0% |
| !! | TTAGGAAAAACAAAATAAAA+CGG | - | chr5.1:5182738-5182757 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCTTTCCTAAATT+AGG | + | chr5.1:5182448-5182467 | MS.gene09929:intron | 15.0% |
| !!! | ATTTTTTTTATTCTTACAGA+AGG | + | chr5.1:5183030-5183049 | MS.gene09929:intron | 15.0% |
| !!! | TTTTTTTTATTCTTACAGAA+GGG | + | chr5.1:5183031-5183050 | MS.gene09929:intron | 15.0% |
| !! | ACCTAATGAATTGTAAAATT+TGG | + | chr5.1:5183922-5183941 | MS.gene09929:intron | 20.0% |
| !! | ATCAAACAGATTAAAAACAA+CGG | - | chr5.1:5181342-5181361 | None:intergenic | 20.0% |
| !! | GCATATGTTAATAAAATAGT+TGG | + | chr5.1:5184129-5184148 | MS.gene09929:CDS | 20.0% |
| !! | GTATAAAAAAATGAATGTTG+AGG | + | chr5.1:5183789-5183808 | MS.gene09929:intron | 20.0% |
| !! | TAAGAAATATTAGTGATTGA+AGG | - | chr5.1:5182335-5182354 | None:intergenic | 20.0% |
| !! | TAATAAACTTACGATTAGAA+TGG | - | chr5.1:5183304-5183323 | None:intergenic | 20.0% |
| !! | TTTCTCATATTAAAACTACA+TGG | + | chr5.1:5183115-5183134 | MS.gene09929:intron | 20.0% |
| !!! | AAAATGAAAGGCATTAATAT+AGG | - | chr5.1:5183165-5183184 | None:intergenic | 20.0% |
| !!! | AAATGAAAGGCATTAATATA+GGG | - | chr5.1:5183164-5183183 | None:intergenic | 20.0% |
| !!! | AATCTGTTTGATAATTTTCT+TGG | + | chr5.1:5181350-5181369 | MS.gene09929:CDS | 20.0% |
| !!! | AATGCCTTTCATTTTTTTTT+GGG | + | chr5.1:5183170-5183189 | MS.gene09929:intron | 20.0% |
| !!! | ACCAAATTTTACAATTCATT+AGG | - | chr5.1:5183926-5183945 | None:intergenic | 20.0% |
| !!! | TAATGCCTTTCATTTTTTTT+TGG | + | chr5.1:5183169-5183188 | MS.gene09929:intron | 20.0% |
| !!! | TATATTTGCGTATTTGTTAT+GGG | + | chr5.1:5181808-5181827 | MS.gene09929:intron | 20.0% |
| !!! | TTATATTTGCGTATTTGTTA+TGG | + | chr5.1:5181807-5181826 | MS.gene09929:intron | 20.0% |
| !!! | TTTTGTTTTTCCTAAGAAAA+CGG | + | chr5.1:5182743-5182762 | MS.gene09929:intron | 20.0% |
| !!! | TTTTTTTATATTATAGGGTG+AGG | + | chr5.1:5181908-5181927 | MS.gene09929:intron | 20.0% |
| ! | ATTCATCAAAACAGTTTACT+TGG | + | chr5.1:5183353-5183372 | MS.gene09929:intron | 25.0% |
| ! | ATTCGATACATGAATTATGA+AGG | + | chr5.1:5184072-5184091 | MS.gene09929:CDS | 25.0% |
| ! | CATATAATCTCTTTCTCTAT+TGG | + | chr5.1:5183380-5183399 | MS.gene09929:intron | 25.0% |
| ! | TTCGATACATGAATTATGAA+GGG | + | chr5.1:5184073-5184092 | MS.gene09929:CDS | 25.0% |
| ! | TTTCTTGTACAGAATGTATT+GGG | + | chr5.1:5183438-5183457 | MS.gene09929:intron | 25.0% |
| !! | AAAATGGATTCTTGACTAAA+AGG | + | chr5.1:5182547-5182566 | MS.gene09929:CDS | 25.0% |
| !! | ATATACCCTTTTTCTTAGTT+CGG | + | chr5.1:5181447-5181466 | MS.gene09929:CDS | 25.0% |
| !! | TAGGTTCTAATGAAATTAGA+AGG | - | chr5.1:5183907-5183926 | None:intergenic | 25.0% |
| !! | TATCGAATTTTCCCAAAAAT+GGG | - | chr5.1:5184060-5184079 | None:intergenic | 25.0% |
| !! | TTGTGTTTCTATTCATTTCA+GGG | + | chr5.1:5184021-5184040 | MS.gene09929:intron | 25.0% |
| !! | TTTGTGTTTCTATTCATTTC+AGG | + | chr5.1:5184020-5184039 | MS.gene09929:intron | 25.0% |
| !! | TTTTCTTGTACAGAATGTAT+TGG | + | chr5.1:5183437-5183456 | MS.gene09929:intron | 25.0% |
| !!! | AATGAAAGGCATTAATATAG+GGG | - | chr5.1:5183163-5183182 | None:intergenic | 25.0% |
| !!! | ACAGTTTAATTTGAATGTTG+AGG | + | chr5.1:5183745-5183764 | MS.gene09929:intron | 25.0% |
| !!! | ATATTTGCGTATTTGTTATG+GGG | + | chr5.1:5181809-5181828 | MS.gene09929:intron | 25.0% |
| !!! | ATGCCTTTCATTTTTTTTTG+GGG | + | chr5.1:5183171-5183190 | MS.gene09929:intron | 25.0% |
| !!! | CATTTTTTTATACATCCAAC+AGG | - | chr5.1:5183782-5183801 | None:intergenic | 25.0% |
| !!! | TATTTTGTTTTCTAGCTCTA+AGG | + | chr5.1:5182987-5183006 | MS.gene09929:intron | 25.0% |
| AAATGTCGATATTGTTATGC+TGG | + | chr5.1:5181597-5181616 | MS.gene09929:intron | 30.0% | |
| AGTATAGTGCTAGAACAATA+AGG | + | chr5.1:5182117-5182136 | MS.gene09929:CDS | 30.0% | |
| ATATACCCGAACTAAGAAAA+AGG | - | chr5.1:5181456-5181475 | None:intergenic | 30.0% | |
| ATATCATTGCTCAAGTGTTA+AGG | + | chr5.1:5182246-5182265 | MS.gene09929:CDS | 30.0% | |
| ATCAACGGTTGAAAGATAAT+TGG | + | chr5.1:5181267-5181286 | MS.gene09929:CDS | 30.0% | |
| ATCTGTCCAAAATGCAAATA+GGG | - | chr5.1:5182636-5182655 | None:intergenic | 30.0% | |
| CAAATCAGTTCCACATAAAA+TGG | - | chr5.1:5183878-5183897 | None:intergenic | 30.0% | |
| CATTTCTTCACTTCTCTTAA+AGG | - | chr5.1:5181999-5182018 | None:intergenic | 30.0% | |
| GATTAGAATGGCCAAAAAAA+AGG | - | chr5.1:5183292-5183311 | None:intergenic | 30.0% | |
| GTATAGTGCTAGAACAATAA+GGG | + | chr5.1:5182118-5182137 | MS.gene09929:CDS | 30.0% | |
| TATACCCGAACTAAGAAAAA+GGG | - | chr5.1:5181455-5181474 | None:intergenic | 30.0% | |
| TATAGTGCTAGAACAATAAG+GGG | + | chr5.1:5182119-5182138 | MS.gene09929:CDS | 30.0% | |
| TATCTGTCCAAAATGCAAAT+AGG | - | chr5.1:5182637-5182656 | None:intergenic | 30.0% | |
| TCAACGGTTGAAAGATAATT+GGG | + | chr5.1:5181268-5181287 | MS.gene09929:CDS | 30.0% | |
| TTGCCCCAAAAAAAAATGAA+AGG | - | chr5.1:5183177-5183196 | None:intergenic | 30.0% | |
| TTTCTTTCCTAAATTAGGAG+TGG | + | chr5.1:5182453-5182472 | MS.gene09929:intron | 30.0% | |
| ! | CATTTAGGGTTTATGCTTAA+GGG | + | chr5.1:5181386-5181405 | MS.gene09929:CDS | 30.0% |
| ! | CTTCAAGATTTCTGAGTTTT+TGG | + | chr5.1:5183995-5184014 | MS.gene09929:intron | 30.0% |
| ! | CTTTTTCTGTTCTTCAATGT+TGG | + | chr5.1:5182788-5182807 | MS.gene09929:intron | 30.0% |
| ! | GTATCGAATTTTCCCAAAAA+TGG | - | chr5.1:5184061-5184080 | None:intergenic | 30.0% |
| ! | TATACCCTTTTTCTTAGTTC+GGG | + | chr5.1:5181448-5181467 | MS.gene09929:CDS | 30.0% |
| ! | TCATTTAGGGTTTATGCTTA+AGG | + | chr5.1:5181385-5181404 | MS.gene09929:CDS | 30.0% |
| ! | TGTGTTTCTATTCATTTCAG+GGG | + | chr5.1:5184022-5184041 | MS.gene09929:intron | 30.0% |
| ! | TTATCTCCCTATTTGCATTT+TGG | + | chr5.1:5182627-5182646 | MS.gene09929:CDS | 30.0% |
| ! | TTCTCTACAATGTTGACTAA+TGG | - | chr5.1:5183546-5183565 | None:intergenic | 30.0% |
| ! | TTTTATATTATAGGGTGAGG+CGG | + | chr5.1:5181911-5181930 | MS.gene09929:intron | 30.0% |
| !! | AGTTTGTTTTCATGAGATGA+AGG | + | chr5.1:5183585-5183604 | MS.gene09929:intron | 30.0% |
| !! | ATTGTAAAATTTGGTGTTGC+AGG | + | chr5.1:5183931-5183950 | MS.gene09929:intron | 30.0% |
| !! | GGAAAATTTGCTATCTGAAA+AGG | + | chr5.1:5184173-5184192 | MS.gene09929:CDS | 30.0% |
| !! | TATTTGCGTATTTGTTATGG+GGG | + | chr5.1:5181810-5181829 | MS.gene09929:intron | 30.0% |
| !! | TCAAAGTTTGTTAGAGAATG+TGG | + | chr5.1:5181945-5181964 | MS.gene09929:CDS | 30.0% |
| !! | TGATAATTTTCTTGGTGCAA+AGG | + | chr5.1:5181358-5181377 | MS.gene09929:CDS | 30.0% |
| !!! | AGTTATTGCCTCCTTTTTTT+TGG | + | chr5.1:5183278-5183297 | MS.gene09929:intron | 30.0% |
| !!! | TTTTTTGTGTGAAGTGCTTT+TGG | + | chr5.1:5183827-5183846 | MS.gene09929:intron | 30.0% |
| AAAACGGTGAGATCTTATCT+TGG | + | chr5.1:5182759-5182778 | MS.gene09929:intron | 35.0% | |
| AAAGGCTGTAGATACTTTCT+TGG | + | chr5.1:5182814-5182833 | MS.gene09929:intron | 35.0% | |
| AAGATACTTGAATGGACAAG+AGG | + | chr5.1:5183466-5183485 | MS.gene09929:CDS | 35.0% | |
| AATTGGAGATGGTTCACTAT+GGG | + | chr5.1:5183220-5183239 | MS.gene09929:CDS | 35.0% | |
| AGAGTAAATGAGAGACAAAG+TGG | - | chr5.1:5181668-5181687 | None:intergenic | 35.0% | |
| AGATTAAAAACAACGGCAAC+AGG | - | chr5.1:5181335-5181354 | None:intergenic | 35.0% | |
| AGCATAGTAAAACAAACCTG+AGG | - | chr5.1:5182708-5182727 | None:intergenic | 35.0% | |
| CCTCATTACGATTCATTACA+AGG | + | chr5.1:5182887-5182906 | MS.gene09929:CDS | 35.0% | |
| CCTGACATCATTCATAACTA+GGG | + | chr5.1:5181784-5181803 | MS.gene09929:intron | 35.0% | |
| CCTTGTAATGAATCGTAATG+AGG | - | chr5.1:5182890-5182909 | None:intergenic | 35.0% | |
| GTTCTTCAATGTTGGTGTAA+AGG | + | chr5.1:5182796-5182815 | MS.gene09929:intron | 35.0% | |
| TAGAATGGCCAAAAAAAAGG+AGG | - | chr5.1:5183289-5183308 | None:intergenic | 35.0% | |
| TATGAAGAGAATGCTGAAGT+TGG | - | chr5.1:5181430-5181449 | None:intergenic | 35.0% | |
| TCCTGTAAGCTAATCTTTCA+TGG | + | chr5.1:5183082-5183101 | MS.gene09929:intron | 35.0% | |
| TTTGACAGTAAGTCATAACC+AGG | - | chr5.1:5181730-5181749 | None:intergenic | 35.0% | |
| ! | AAAGTGCAGTTGGTTTACAA+GGG | - | chr5.1:5182602-5182621 | None:intergenic | 35.0% |
| ! | CAAATCTGAGATTTGTGAGA+GGG | + | chr5.1:5182019-5182038 | MS.gene09929:CDS | 35.0% |
| ! | GTGTTGATGGGAAGTAAAAA+TGG | + | chr5.1:5182531-5182550 | MS.gene09929:CDS | 35.0% |
| ! | TAAGATCTCACCGTTTTCTT+AGG | - | chr5.1:5182756-5182775 | None:intergenic | 35.0% |
| ! | TGTGGTAGTTCCATTTTATG+TGG | + | chr5.1:5183865-5183884 | MS.gene09929:intron | 35.0% |
| ! | TTTTCCAGAACCTTCTTTCA+AGG | - | chr5.1:5181216-5181235 | None:intergenic | 35.0% |
| !! | AAAGAAGGTTCTGGAAAAAC+GGG | + | chr5.1:5181218-5181237 | MS.gene09929:CDS | 35.0% |
| !! | ATAAAATAGTTGGTGAGCTC+AGG | + | chr5.1:5184139-5184158 | MS.gene09929:CDS | 35.0% |
| !! | GAAAGAAGGTTCTGGAAAAA+CGG | + | chr5.1:5181217-5181236 | MS.gene09929:CDS | 35.0% |
| !! | TCCATGAAAGATTAGCTTAC+AGG | - | chr5.1:5183086-5183105 | None:intergenic | 35.0% |
| AAACATGACATAGAGTGACC+TGG | + | chr5.1:5181709-5181728 | MS.gene09929:intron | 40.0% | |
| AATCCTCAGGATTACAACAG+CGG | - | chr5.1:5184209-5184228 | None:intergenic | 40.0% | |
| ACGATTCATTACAAGGAGCA+TGG | + | chr5.1:5182894-5182913 | MS.gene09929:CDS | 40.0% | |
| ACTGACACTGACATTAGACA+CGG | - | chr5.1:5182384-5182403 | None:intergenic | 40.0% | |
| ACTGGATGTTCAGAGATCAA+CGG | + | chr5.1:5181252-5181271 | MS.gene09929:CDS | 40.0% | |
| AGGGATCCAAGTGGTTATAA+CGG | + | chr5.1:5183660-5183679 | MS.gene09929:CDS | 40.0% | |
| ATATTGTTATGCTGGATGCG+AGG | + | chr5.1:5181605-5181624 | MS.gene09929:intron | 40.0% | |
| ATCCATTTCATACTGCAGTC+AGG | - | chr5.1:5183637-5183656 | None:intergenic | 40.0% | |
| ATGAATGATGTCAGGCAACT+TGG | - | chr5.1:5181779-5181798 | None:intergenic | 40.0% | |
| ATTAGCCCTGTGAAATTGTC+CGG | - | chr5.1:5181848-5181867 | None:intergenic | 40.0% | |
| CAATTGGAGATGGTTCACTA+TGG | + | chr5.1:5183219-5183238 | MS.gene09929:CDS | 40.0% | |
| CATATCTCAAGTGCTTCTTC+AGG | - | chr5.1:5183493-5183512 | None:intergenic | 40.0% | |
| CATCTTAAAGTCACACTCAG+TGG | - | chr5.1:5181638-5181657 | None:intergenic | 40.0% | |
| CCCTAGTTATGAATGATGTC+AGG | - | chr5.1:5181787-5181806 | None:intergenic | 40.0% | |
| GAATGCTTCTCAATTGGAGA+TGG | + | chr5.1:5183209-5183228 | MS.gene09929:CDS | 40.0% | |
| GACAATTTCACAGGGCTAAT+TGG | + | chr5.1:5181848-5181867 | MS.gene09929:intron | 40.0% | |
| GACTGCAGTATGAAATGGAT+GGG | + | chr5.1:5183637-5183656 | MS.gene09929:intron | 40.0% | |
| GCCTGACATCATTCATAACT+AGG | + | chr5.1:5181783-5181802 | MS.gene09929:intron | 40.0% | |
| GGGCAAAGAAGATACTTGAA+TGG | + | chr5.1:5183458-5183477 | MS.gene09929:CDS | 40.0% | |
| GTAGCAAACAAGAACAAAGC+AGG | - | chr5.1:5183725-5183744 | None:intergenic | 40.0% | |
| GTTCACTATGGGAAAATGCA+CGG | + | chr5.1:5183231-5183250 | MS.gene09929:CDS | 40.0% | |
| GTTTCTATTCATTTCAGGGG+TGG | + | chr5.1:5184025-5184044 | MS.gene09929:intron | 40.0% | |
| TATATGTGGGGTACATGATC+AGG | + | chr5.1:5183695-5183714 | MS.gene09929:CDS | 40.0% | |
| TATCATCCCAGTCTATGACA+TGG | - | chr5.1:5182229-5182248 | None:intergenic | 40.0% | |
| TATTGTTATGCTGGATGCGA+GGG | + | chr5.1:5181606-5181625 | MS.gene09929:intron | 40.0% | |
| TCACAATGTTGTGCCTCTTT+GGG | + | chr5.1:5182076-5182095 | MS.gene09929:CDS | 40.0% | |
| TGACTGCAGTATGAAATGGA+TGG | + | chr5.1:5183636-5183655 | MS.gene09929:intron | 40.0% | |
| TGTAAACCAACTGCACTTTC+TGG | + | chr5.1:5182603-5182622 | MS.gene09929:CDS | 40.0% | |
| TTGAAGGCAACCATATCTGT+CGG | - | chr5.1:5182319-5182338 | None:intergenic | 40.0% | |
| ! | AGAATGTGGAGCTTCACTTT+TGG | + | chr5.1:5181959-5181978 | MS.gene09929:CDS | 40.0% |
| ! | CGATTCATTACAAGGAGCAT+GGG | + | chr5.1:5182895-5182914 | MS.gene09929:CDS | 40.0% |
| ! | GAAAGTGCAGTTGGTTTACA+AGG | - | chr5.1:5182603-5182622 | None:intergenic | 40.0% |
| ! | GATAAACCAGAAAGTGCAGT+TGG | - | chr5.1:5182612-5182631 | None:intergenic | 40.0% |
| ! | GCAAATCTGAGATTTGTGAG+AGG | + | chr5.1:5182018-5182037 | MS.gene09929:CDS | 40.0% |
| ! | TCTTGGAGGAGTTGATTGTT+CGG | + | chr5.1:5182831-5182850 | MS.gene09929:CDS | 40.0% |
| ! | TTGTGAGAGGGTTAGTGATT+TGG | + | chr5.1:5182031-5182050 | MS.gene09929:CDS | 40.0% |
| ! | TTTGGGGCAAATATCAGCTT+TGG | + | chr5.1:5183187-5183206 | MS.gene09929:intron | 40.0% |
| !! | GCTTTGGAATGCTTCTCAAT+TGG | + | chr5.1:5183203-5183222 | MS.gene09929:intron | 40.0% |
| !! | GGAAAATGCACGGTTTTATG+CGG | + | chr5.1:5183241-5183260 | MS.gene09929:CDS | 40.0% |
| !! | TTATGTAGCACCGACAGATA+TGG | + | chr5.1:5182306-5182325 | MS.gene09929:intron | 40.0% |
| AACAACGGCAACAGGAACTT+TGG | - | chr5.1:5181327-5181346 | None:intergenic | 45.0% | |
| AACATGTGGTCGCTTATCAG+AGG | - | chr5.1:5182951-5182970 | None:intergenic | 45.0% | |
| ACAAGGGTTATTGCGATCTG+TGG | - | chr5.1:5182586-5182605 | None:intergenic | 45.0% | |
| AGACACGGCTGACAATAAGA+CGG | - | chr5.1:5182369-5182388 | None:intergenic | 45.0% | |
| ATGCAGCCGTTATAACCACT+TGG | - | chr5.1:5183669-5183688 | None:intergenic | 45.0% | |
| CACCTGACTGCAGTATGAAA+TGG | + | chr5.1:5183632-5183651 | MS.gene09929:intron | 45.0% | |
| CTAAATTAGGAGTGGAGCTG+AGG | + | chr5.1:5182461-5182480 | MS.gene09929:intron | 45.0% | |
| CTCACAATGTTGTGCCTCTT+TGG | + | chr5.1:5182075-5182094 | MS.gene09929:CDS | 45.0% | |
| CTCAGCTCCACTCCTAATTT+AGG | - | chr5.1:5182463-5182482 | None:intergenic | 45.0% | |
| CTGCATGTGGTCTATATGTG+GGG | + | chr5.1:5183683-5183702 | MS.gene09929:CDS | 45.0% | |
| GAGGAATTTCTGACTCCTGT+TGG | + | chr5.1:5183764-5183783 | MS.gene09929:intron | 45.0% | |
| GCAGTATGAAATGGATGGGA+GGG | + | chr5.1:5183641-5183660 | MS.gene09929:intron | 45.0% | |
| GCTGCATGTGGTCTATATGT+GGG | + | chr5.1:5183682-5183701 | MS.gene09929:CDS | 45.0% | |
| GGCTGTAGATACTTTCTTGG+AGG | + | chr5.1:5182817-5182836 | MS.gene09929:intron | 45.0% | |
| GTGACTCACGTGTAAACATG+TGG | - | chr5.1:5182965-5182984 | None:intergenic | 45.0% | |
| TAAAGTCACACTCAGTGGCA+AGG | - | chr5.1:5181633-5181652 | None:intergenic | 45.0% | |
| TATATTATAGGGTGAGGCGG+AGG | + | chr5.1:5181914-5181933 | MS.gene09929:intron | 45.0% | |
| TCCATTGCAGCAATTTCTCC+AGG | - | chr5.1:5182510-5182529 | None:intergenic | 45.0% | |
| TCTGAACATCCAGTACACGA+CGG | - | chr5.1:5181246-5181265 | None:intergenic | 45.0% | |
| TGAGCTCAGGAAGAGAAAAG+CGG | + | chr5.1:5184152-5184171 | MS.gene09929:CDS | 45.0% | |
| TGAGGACCATGTCATAGACT+GGG | + | chr5.1:5182220-5182239 | MS.gene09929:CDS | 45.0% | |
| TGCAGTATGAAATGGATGGG+AGG | + | chr5.1:5183640-5183659 | MS.gene09929:intron | 45.0% | |
| TGTCAGTGCGAAGATTCACA+TGG | + | chr5.1:5182397-5182416 | MS.gene09929:intron | 45.0% | |
| TTCTCAGAAGCAACCCAAAG+AGG | - | chr5.1:5182092-5182111 | None:intergenic | 45.0% | |
| TTCTTACAGAAGGGAGCAGT+TGG | + | chr5.1:5183040-5183059 | MS.gene09929:intron | 45.0% | |
| ! | ATTACAAGGAGCATGGGAGT+GGG | + | chr5.1:5182901-5182920 | MS.gene09929:CDS | 45.0% |
| ! | TTGGGTTGCTTCTGAGAAGT+TGG | + | chr5.1:5182094-5182113 | MS.gene09929:CDS | 45.0% |
| !! | GCTGAAGTTGGTGACACAAT+TGG | - | chr5.1:5181418-5181437 | None:intergenic | 45.0% |
| !! | GCTGCAATGGAAGTGTTGAT+GGG | + | chr5.1:5182519-5182538 | MS.gene09929:CDS | 45.0% |
| !! | TGCTGCAATGGAAGTGTTGA+TGG | + | chr5.1:5182518-5182537 | MS.gene09929:CDS | 45.0% |
| AACTACCACAGCCTAGCTAG+AGG | - | chr5.1:5183855-5183874 | None:intergenic | 50.0% | |
| ACTCCGCTGTTGTAATCCTG+AGG | + | chr5.1:5184203-5184222 | MS.gene09929:CDS | 50.0% | |
| ATGACCCATTTCGCAGTTGG+TGG | - | chr5.1:5182197-5182216 | None:intergenic | 50.0% | |
| CGAACCACCAACTGCGAAAT+GGG | + | chr5.1:5182190-5182209 | MS.gene09929:CDS | 50.0% | |
| CGCATTCGGACCTTGAAAGA+AGG | + | chr5.1:5181203-5181222 | MS.gene09929:CDS | 50.0% | |
| CGGACCTTGAAAGAAGGTTC+TGG | + | chr5.1:5181209-5181228 | MS.gene09929:CDS | 50.0% | |
| CTGAACATCCAGTACACGAC+GGG | - | chr5.1:5181245-5181264 | None:intergenic | 50.0% | |
| CTGAGGACCATGTCATAGAC+TGG | + | chr5.1:5182219-5182238 | MS.gene09929:CDS | 50.0% | |
| CTGAGGTTCCTGAAGTGGAT+TGG | + | chr5.1:5182478-5182497 | MS.gene09929:CDS | 50.0% | |
| GCCTGGAGAAATTGCTGCAA+TGG | + | chr5.1:5182506-5182525 | MS.gene09929:CDS | 50.0% | |
| GCTACGAGCTTCATATCCTC+AGG | + | chr5.1:5182689-5182708 | MS.gene09929:CDS | 50.0% | |
| GGCTGCATGTGGTCTATATG+TGG | + | chr5.1:5183681-5183700 | MS.gene09929:CDS | 50.0% | |
| GTGATGACCCATTTCGCAGT+TGG | - | chr5.1:5182200-5182219 | None:intergenic | 50.0% | |
| GTGGTTATAACGGCTGCATG+TGG | + | chr5.1:5183670-5183689 | MS.gene09929:CDS | 50.0% | |
| TCGAACCACCAACTGCGAAA+TGG | + | chr5.1:5182189-5182208 | MS.gene09929:CDS | 50.0% | |
| TCGAGCCGGACAATTTCACA+GGG | + | chr5.1:5181840-5181859 | MS.gene09929:intron | 50.0% | |
| TGCGAAATGGGTCATCACTG+AGG | + | chr5.1:5182202-5182221 | MS.gene09929:CDS | 50.0% | |
| ! | CATTACAAGGAGCATGGGAG+TGG | + | chr5.1:5182900-5182919 | MS.gene09929:CDS | 50.0% |
| ! | GTGCAAAGGCGCGTCATTTA+GGG | + | chr5.1:5181372-5181391 | MS.gene09929:CDS | 50.0% |
| !!! | TGCTTTTGGTGCCTCTAGCT+AGG | + | chr5.1:5183841-5183860 | MS.gene09929:intron | 50.0% |
| ATGGATGGGAGGGATCCAAG+TGG | + | chr5.1:5183651-5183670 | MS.gene09929:CDS | 55.0% | |
| ATGGGGGTAATTGCTCGAGC+CGG | + | chr5.1:5181826-5181845 | MS.gene09929:intron | 55.0% | |
| CAGAAGGGAGCAGTTGGAGA+AGG | + | chr5.1:5183046-5183065 | MS.gene09929:intron | 55.0% | |
| CTCGAGCCGGACAATTTCAC+AGG | + | chr5.1:5181839-5181858 | MS.gene09929:intron | 55.0% | |
| GGCTCACACCAATCCACTTC+AGG | - | chr5.1:5182489-5182508 | None:intergenic | 55.0% | |
| TCAAGGTCCGAATGCGACCA+GGG | - | chr5.1:5181199-5181218 | None:intergenic | 55.0% | |
| TGGAGCTGAGGTTCCTGAAG+TGG | + | chr5.1:5182473-5182492 | MS.gene09929:CDS | 55.0% | |
| TTCAAGGTCCGAATGCGACC+AGG | - | chr5.1:5181200-5181219 | None:intergenic | 55.0% | |
| TTCACCGACGGCGAAATTGG+CGG | - | chr5.1:5181176-5181195 | None:intergenic | 55.0% | |
| ! | ATCAGAGGCGTGGTCGAGTA+AGG | - | chr5.1:5182936-5182955 | None:intergenic | 55.0% |
| ! | GGTGCAAAGGCGCGTCATTT+AGG | + | chr5.1:5181371-5181390 | MS.gene09929:CDS | 55.0% |
| !! | GAAGTGGATTGGTGTGAGCC+TGG | + | chr5.1:5182489-5182508 | MS.gene09929:CDS | 55.0% |
| !! | GCAGTTGGTGGTTCGACATC+AGG | - | chr5.1:5182185-5182204 | None:intergenic | 55.0% |
| !!! | GGCGAGAGCGTCCCATTTTT+GGG | + | chr5.1:5184046-5184065 | MS.gene09929:CDS | 55.0% |
| !!! | TGGCGAGAGCGTCCCATTTT+TGG | + | chr5.1:5184045-5184064 | MS.gene09929:CDS | 55.0% |
| AAACGGGTCCCGTCGTGTAC+TGG | + | chr5.1:5181234-5181253 | MS.gene09929:CDS | 60.0% | |
| ATGCGACCAGGGTTCACCGA+CGG | - | chr5.1:5181188-5181207 | None:intergenic | 60.0% | |
| ATTTCGCCGTCGGTGAACCC+TGG | + | chr5.1:5181179-5181198 | MS.gene09929:CDS | 60.0% | |
| CGGTGAACCCTGGTCGCATT+CGG | + | chr5.1:5181189-5181208 | MS.gene09929:CDS | 60.0% | |
| GGGTTCACCGACGGCGAAAT+TGG | - | chr5.1:5181179-5181198 | None:intergenic | 60.0% | |
| GTGGTCGCTTATCAGAGGCG+TGG | - | chr5.1:5182946-5182965 | None:intergenic | 60.0% | |
| TGGTGCCTCTAGCTAGGCTG+TGG | + | chr5.1:5183847-5183866 | MS.gene09929:intron | 60.0% | |
| ACCGACGGCGAAATTGGCGG+CGG | - | chr5.1:5181173-5181192 | None:intergenic | 65.0% | |
| AATTGGCGGCGGCGACGGTG+TGG | - | chr5.1:5181162-5181181 | None:intergenic | 70.0% | |
| GCCGCCGCCAATTTCGCCGT+CGG | + | chr5.1:5181169-5181188 | MS.gene09929:CDS | 70.0% | |
| GGCGAAATTGGCGGCGGCGA+CGG | - | chr5.1:5181167-5181186 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 5181152 | 5184230 | 5181152 | ID=MS.gene09929 |
| chr5.1 | mRNA | 5181152 | 5184230 | 5181152 | ID=MS.gene09929.t1;Parent=MS.gene09929 |
| chr5.1 | exon | 5181152 | 5181469 | 5181152 | ID=MS.gene09929.t1.exon1;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5181152 | 5181469 | 5181152 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| chr5.1 | exon | 5181924 | 5182267 | 5181924 | ID=MS.gene09929.t1.exon2;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5181924 | 5182267 | 5181924 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| chr5.1 | exon | 5182470 | 5182710 | 5182470 | ID=MS.gene09929.t1.exon3;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5182470 | 5182710 | 5182470 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| chr5.1 | exon | 5182818 | 5182975 | 5182818 | ID=MS.gene09929.t1.exon4;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5182818 | 5182975 | 5182818 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| chr5.1 | exon | 5183049 | 5183085 | 5183049 | ID=MS.gene09929.t1.exon5;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5183049 | 5183085 | 5183049 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| chr5.1 | exon | 5183204 | 5183262 | 5183204 | ID=MS.gene09929.t1.exon6;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5183204 | 5183262 | 5183204 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| chr5.1 | exon | 5183450 | 5183531 | 5183450 | ID=MS.gene09929.t1.exon7;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5183450 | 5183531 | 5183450 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| chr5.1 | exon | 5183645 | 5183716 | 5183645 | ID=MS.gene09929.t1.exon8;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5183645 | 5183716 | 5183645 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| chr5.1 | exon | 5184042 | 5184230 | 5184042 | ID=MS.gene09929.t1.exon9;Parent=MS.gene09929.t1 |
| chr5.1 | CDS | 5184042 | 5184230 | 5184042 | ID=cds.MS.gene09929.t1;Parent=MS.gene09929.t1 |
| Gene Sequence |
| Protein sequence |
