Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21450.t1 | XP_003611508.1 | 99.1 | 334 | 3 | 0 | 1 | 334 | 1 | 334 | 2.50E-185 | 657.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21450.t1 | P19446 | 83.5 | 334 | 53 | 1 | 1 | 334 | 1 | 332 | 1.1e-157 | 557.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21450.t1 | G7K140 | 99.1 | 334 | 3 | 0 | 1 | 334 | 1 | 334 | 1.8e-185 | 657.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059657 | MS.gene21450 | 0.903225 | 4.32E-79 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21450 | MS.gene40601 | PPI |
| MS.gene21450 | MS.gene053632 | PPI |
| MS.gene21450 | MS.gene025802 | PPI |
| MS.gene21450 | MS.gene028531 | PPI |
| MS.gene21450 | MS.gene025803 | PPI |
| MS.gene21450 | MS.gene40108 | PPI |
| MS.gene21450 | MS.gene09966 | PPI |
| MS.gene21450 | MS.gene21162 | PPI |
| MS.gene21450 | MS.gene015443 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21450.t1 | MTR_5g014710 | 99.102 | 334 | 3 | 0 | 1 | 334 | 1 | 334 | 0.0 | 679 |
| MS.gene21450.t1 | MTR_4g092690 | 81.138 | 334 | 61 | 1 | 1 | 334 | 1 | 332 | 0.0 | 559 |
| MS.gene21450.t1 | MTR_8g463760 | 67.010 | 291 | 95 | 1 | 45 | 334 | 29 | 319 | 2.26e-138 | 396 |
| MS.gene21450.t1 | MTR_8g463760 | 70.526 | 190 | 56 | 0 | 45 | 234 | 29 | 218 | 2.18e-91 | 273 |
| MS.gene21450.t1 | MTR_2g021700 | 80.000 | 60 | 12 | 0 | 204 | 263 | 43 | 102 | 3.40e-27 | 104 |
| MS.gene21450.t1 | MTR_2g045010 | 80.000 | 60 | 12 | 0 | 204 | 263 | 43 | 102 | 3.40e-27 | 104 |
| MS.gene21450.t1 | MTR_4g033285 | 81.481 | 54 | 10 | 0 | 204 | 257 | 43 | 96 | 2.89e-24 | 95.1 |
| MS.gene21450.t1 | MTR_5g012390 | 24.031 | 258 | 163 | 10 | 48 | 286 | 39 | 282 | 5.34e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21450.t1 | AT2G22780 | 84.404 | 327 | 51 | 0 | 8 | 334 | 4 | 330 | 0.0 | 565 |
| MS.gene21450.t1 | AT5G09660 | 79.341 | 334 | 65 | 1 | 1 | 334 | 1 | 330 | 0.0 | 523 |
| MS.gene21450.t1 | AT5G09660 | 79.042 | 334 | 65 | 2 | 1 | 334 | 1 | 329 | 0.0 | 517 |
| MS.gene21450.t1 | AT5G09660 | 82.468 | 308 | 54 | 0 | 27 | 334 | 2 | 309 | 0.0 | 508 |
| MS.gene21450.t1 | AT5G09660 | 80.263 | 304 | 56 | 1 | 1 | 304 | 1 | 300 | 1.30e-170 | 478 |
| MS.gene21450.t1 | AT5G09660 | 83.813 | 278 | 45 | 0 | 27 | 304 | 2 | 279 | 3.47e-165 | 464 |
| MS.gene21450.t1 | AT1G53240 | 67.458 | 295 | 96 | 0 | 40 | 334 | 23 | 317 | 8.23e-144 | 410 |
| MS.gene21450.t1 | AT3G15020 | 68.621 | 290 | 91 | 0 | 45 | 334 | 28 | 317 | 1.43e-142 | 407 |
| MS.gene21450.t1 | AT3G47520 | 64.828 | 290 | 100 | 1 | 47 | 334 | 83 | 372 | 4.84e-137 | 395 |
| MS.gene21450.t1 | AT3G15020 | 67.518 | 274 | 89 | 0 | 45 | 318 | 28 | 301 | 8.90e-132 | 378 |
Find 94 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAATTTGCATATGAATT+TGG | 0.129618 | 5.1:+7574444 | None:intergenic |
| AGGATTCAAAGTTGCGATTT+TGG | 0.162640 | 5.1:-7574215 | MS.gene21450:CDS |
| CTCTTGTCATTCCAGGTTTA+CGG | 0.229245 | 5.1:+7573011 | None:intergenic |
| TCAAGTACTCAATTTCCTTT+GGG | 0.248840 | 5.1:+7571411 | None:intergenic |
| CAGCTTGAGGATGCACTTAC+AGG | 0.286947 | 5.1:-7573067 | MS.gene21450:CDS |
| TTGACAGATCGCATACAAAA+TGG | 0.300388 | 5.1:-7571392 | MS.gene21450:CDS |
| GTCAAGTACTCAATTTCCTT+TGG | 0.312990 | 5.1:+7571410 | None:intergenic |
| TGTTTAGGTTCGAGGATTCT+TGG | 0.325611 | 5.1:-7573098 | MS.gene21450:intron |
| GTTTAGGTTCGAGGATTCTT+GGG | 0.338537 | 5.1:-7573097 | MS.gene21450:intron |
| ATGTGGATGTTCCTGTTGTC+GGG | 0.339112 | 5.1:-7571598 | MS.gene21450:CDS |
| AGATCATCTCTTGTCATTCC+AGG | 0.341489 | 5.1:+7573004 | None:intergenic |
| TAAAATTCAGGCTGAAGTTA+TGG | 0.356116 | 5.1:-7571636 | MS.gene21450:intron |
| TCTTGTCATTCCAGGTTTAC+GGG | 0.357597 | 5.1:+7573012 | None:intergenic |
| TGCAGATCCAGCTCCAGCTT+TGG | 0.369553 | 5.1:+7570818 | None:intergenic |
| TGCACTTACAGGTATGGATT+TGG | 0.375153 | 5.1:-7573056 | MS.gene21450:CDS |
| TGACAATGCTTGACGTGGTT+AGG | 0.381452 | 5.1:-7572814 | MS.gene21450:CDS |
| TTGAAAACCTCAGCCGCAAT+AGG | 0.389125 | 5.1:+7572875 | None:intergenic |
| CACTGTTCCTATTGCGGCTG+AGG | 0.396544 | 5.1:-7572882 | MS.gene21450:CDS |
| AAGAGGTAAAATCGTGATTC+CGG | 0.396845 | 5.1:+7571568 | None:intergenic |
| CTCTAGGCCAAAGCTGGAGC+TGG | 0.397270 | 5.1:-7570825 | MS.gene21450:intron |
| AAAATTCAGGCTGAAGTTAT+GGG | 0.399622 | 5.1:-7571635 | MS.gene21450:intron |
| GTTGAGGAATTTCTTCCTCT+TGG | 0.402166 | 5.1:-7570205 | MS.gene21450:CDS |
| ATAGGAACAGTGGAGTTAAC+TGG | 0.409234 | 5.1:+7572893 | None:intergenic |
| GTCACTCCCAACAGTCTCTT+GGG | 0.415028 | 5.1:+7572833 | None:intergenic |
| TGTCACTCCCAACAGTCTCT+TGG | 0.418692 | 5.1:+7572832 | None:intergenic |
| GATGTGGATGTTCCTGTTGT+CGG | 0.424834 | 5.1:-7571599 | MS.gene21450:CDS |
| CATACCTCTCATAATCACTT+AGG | 0.429482 | 5.1:+7570179 | None:intergenic |
| ATGTTCATTGCCGTGCCAAA+GGG | 0.429704 | 5.1:-7574246 | MS.gene21450:CDS |
| GATCTCTTCAATATTAATGC+TGG | 0.432800 | 5.1:-7572986 | MS.gene21450:CDS |
| GATTTGGTAATCATTCCTGC+TGG | 0.434549 | 5.1:-7573040 | MS.gene21450:CDS |
| TGACAGATCGCATACAAAAT+GGG | 0.435560 | 5.1:-7571391 | MS.gene21450:CDS |
| GACAATGCTTGACGTGGTTA+GGG | 0.451116 | 5.1:-7572813 | MS.gene21450:CDS |
| ATACCTCTCATAATCACTTA+GGG | 0.455021 | 5.1:+7570180 | None:intergenic |
| TTGGGTGCTGCTGGTGGCAT+AGG | 0.470171 | 5.1:-7574196 | MS.gene21450:CDS |
| ATCTTCATCAACATAGAAAG+AGG | 0.476416 | 5.1:+7574169 | None:intergenic |
| ATCTCTTCAATATTAATGCT+GGG | 0.478335 | 5.1:-7572985 | MS.gene21450:CDS |
| ATTTGGTAATCATTCCTGCT+GGG | 0.479832 | 5.1:-7573039 | MS.gene21450:CDS |
| CATACATACCACAAACGTAT+TGG | 0.480102 | 5.1:+7572790 | None:intergenic |
| TATGATCCCAAGAGACTGTT+GGG | 0.480871 | 5.1:-7572839 | MS.gene21450:CDS |
| TATGATGTCGTTAATACTCC+TGG | 0.481340 | 5.1:-7574118 | MS.gene21450:CDS |
| ATCAAGTTTACAATCGCCTT+AGG | 0.482390 | 5.1:+7572923 | None:intergenic |
| GCTGGGGTTCCCCGTAAACC+TGG | 0.485146 | 5.1:-7573022 | MS.gene21450:CDS |
| ATGTGCATATGTTGATTCAC+AGG | 0.490249 | 5.1:-7570438 | MS.gene21450:intron |
| TGAGGATGCACTTACAGGTA+TGG | 0.495906 | 5.1:-7573062 | MS.gene21450:CDS |
| GGTTAGGGCCAATACGTTTG+TGG | 0.497203 | 5.1:-7572798 | MS.gene21450:intron |
| CCTTGAGATTGGGAGGATTG+AGG | 0.501008 | 5.1:+7574400 | None:intergenic |
| GGTTTACGGGGAACCCCAGC+AGG | 0.501240 | 5.1:+7573025 | None:intergenic |
| AATTTCCTTTGGGGTGAAAG+AGG | 0.509427 | 5.1:+7571421 | None:intergenic |
| TGGATCTGCAACACTATCAA+TGG | 0.512103 | 5.1:-7570805 | MS.gene21450:intron |
| AATGTTCATTGCCGTGCCAA+AGG | 0.520173 | 5.1:-7574247 | MS.gene21450:CDS |
| TCCTTTGGGGTGAAAGAGGA+AGG | 0.520708 | 5.1:+7571425 | None:intergenic |
| ACAGGAACATCCACATCCCT+TGG | 0.523779 | 5.1:+7571605 | None:intergenic |
| GTTGATGAAGATGAATCCAT+TGG | 0.529675 | 5.1:-7574158 | MS.gene21450:CDS |
| AAAATCGCAACTTTGAATCC+TGG | 0.532660 | 5.1:+7574217 | None:intergenic |
| ACCTTCCTCTTTCACCCCAA+AGG | 0.539622 | 5.1:-7571426 | MS.gene21450:CDS |
| GAAATTCCTCAACTCCGTTA+CGG | 0.539768 | 5.1:+7570215 | None:intergenic |
| GCATGTCTTCGTGCGTTGAA+AGG | 0.542596 | 5.1:-7570479 | MS.gene21450:CDS |
| AAAGTACGACTTGGCCGTAA+CGG | 0.543008 | 5.1:-7570229 | MS.gene21450:CDS |
| TAACTCCACTGTTCCTATTG+CGG | 0.545645 | 5.1:-7572888 | MS.gene21450:CDS |
| AAGTTATGGGTCTTGATCCA+AGG | 0.546437 | 5.1:-7571622 | MS.gene21450:CDS |
| ATTGGGAGGATTGAGGTGGC+TGG | 0.548918 | 5.1:+7574407 | None:intergenic |
| GATTGCAAAGCGATGTCCTA+AGG | 0.560507 | 5.1:-7572939 | MS.gene21450:CDS |
| TTTGGTAATCATTCCTGCTG+GGG | 0.563841 | 5.1:-7573038 | MS.gene21450:CDS |
| TTATGATCCCAAGAGACTGT+TGG | 0.575018 | 5.1:-7572840 | MS.gene21450:CDS |
| GGGTCTTGATCCAAGGGATG+TGG | 0.578747 | 5.1:-7571615 | MS.gene21450:CDS |
| TTTGCATCAAAAGTACGACT+TGG | 0.583080 | 5.1:-7570238 | MS.gene21450:CDS |
| TGTGGATGTTCCTGTTGTCG+GGG | 0.585204 | 5.1:-7571597 | MS.gene21450:CDS |
| CAAGTACTCAATTTCCTTTG+GGG | 0.586894 | 5.1:+7571412 | None:intergenic |
| CTGATATCAGAAGTAACACC+AGG | 0.589402 | 5.1:+7574100 | None:intergenic |
| GACAGATCGCATACAAAATG+GGG | 0.591432 | 5.1:-7571390 | MS.gene21450:CDS |
| TTTAGGTTCGAGGATTCTTG+GGG | 0.597375 | 5.1:-7573096 | MS.gene21450:intron |
| CTTGTCATTCCAGGTTTACG+GGG | 0.597794 | 5.1:+7573013 | None:intergenic |
| AGATGAAGAACAGAAACCAA+TGG | 0.604683 | 5.1:+7574142 | None:intergenic |
| AGTTATGGGTCTTGATCCAA+GGG | 0.605244 | 5.1:-7571621 | MS.gene21450:CDS |
| ACTTGGCCGTAACGGAGTTG+AGG | 0.606364 | 5.1:-7570221 | MS.gene21450:CDS |
| GTGCAGACCTGAGAAAGAAG+AGG | 0.606511 | 5.1:+7571551 | None:intergenic |
| CTTGGGGCAAAATCAGCTTG+AGG | 0.607236 | 5.1:-7573080 | MS.gene21450:CDS |
| AAACGTACCTTGAGATTGGG+AGG | 0.611382 | 5.1:+7574393 | None:intergenic |
| TACTTCTGATATCAGTCACA+TGG | 0.612010 | 5.1:-7574092 | MS.gene21450:CDS |
| CCTCAATCCTCCCAATCTCA+AGG | 0.621292 | 5.1:-7574400 | MS.gene21450:intron |
| GTGGATGTTCCTGTTGTCGG+GGG | 0.624820 | 5.1:-7571596 | MS.gene21450:CDS |
| GTTCATTGCCGTGCCAAAGG+GGG | 0.629166 | 5.1:-7574244 | MS.gene21450:CDS |
| TGTTCATTGCCGTGCCAAAG+GGG | 0.630055 | 5.1:-7574245 | MS.gene21450:CDS |
| GTCCCCTAAGTGATTATGAG+AGG | 0.633118 | 5.1:-7570183 | None:intergenic |
| CTCAGCCGCAATAGGAACAG+TGG | 0.637103 | 5.1:+7572883 | None:intergenic |
| TTTGGGGTGAAAGAGGAAGG+TGG | 0.646297 | 5.1:+7571428 | None:intergenic |
| TCTTCGTGCGTTGAAAGGAG+AGG | 0.666069 | 5.1:-7570474 | MS.gene21450:CDS |
| TAATCACTTAGGGGACCAAG+AGG | 0.668806 | 5.1:+7570190 | None:intergenic |
| TGAGATTGGGAGGATTGAGG+TGG | 0.679990 | 5.1:+7574403 | None:intergenic |
| TACCTCTCATAATCACTTAG+GGG | 0.681098 | 5.1:+7570181 | None:intergenic |
| GGGAGTGACAATGCTTGACG+TGG | 0.697199 | 5.1:-7572819 | MS.gene21450:CDS |
| ACAGATCGCATACAAAATGG+GGG | 0.720421 | 5.1:-7571389 | MS.gene21450:CDS |
| GTTATGTAGATGAATGAACA+TGG | 0.725435 | 5.1:-7574286 | MS.gene21450:intron |
| ATGTAGATGAATGAACATGG+TGG | 0.812154 | 5.1:-7574283 | MS.gene21450:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTGAATATAAATAGAT+GGG | - | chr5.1:7573860-7573879 | MS.gene21450:intron | 10.0% |
| !!! | TTATTTTGAATATAAATAGA+TGG | - | chr5.1:7573859-7573878 | MS.gene21450:intron | 10.0% |
| !! | AAGTAAGAAATTAAATCTTT+GGG | - | chr5.1:7572032-7572051 | MS.gene21450:intron | 15.0% |
| !! | TAAGTAAGAAATTAAATCTT+TGG | - | chr5.1:7572031-7572050 | MS.gene21450:intron | 15.0% |
| !! | TTAATTCCATTAATAAGTAT+AGG | + | chr5.1:7573896-7573915 | None:intergenic | 15.0% |
| !! | TTATTTCGTGATTTATAATT+TGG | - | chr5.1:7570598-7570617 | MS.gene21450:intron | 15.0% |
| !!! | ATATGTTGACTTAAATTATA+TGG | - | chr5.1:7573416-7573435 | MS.gene21450:intron | 15.0% |
| !!! | ATTAGAATCTTTTAAAACTA+TGG | + | chr5.1:7574275-7574294 | None:intergenic | 15.0% |
| !! | AACATTGGAATATTAGATAT+CGG | + | chr5.1:7573334-7573353 | None:intergenic | 20.0% |
| !! | AATCTTAAAAATACTTTAGC+TGG | - | chr5.1:7572404-7572423 | MS.gene21450:intron | 20.0% |
| !! | ACATATAAGAAAAACAATTG+TGG | - | chr5.1:7573953-7573972 | MS.gene21450:intron | 20.0% |
| !! | ACTCAAGTAATTAATATTGT+TGG | - | chr5.1:7572364-7572383 | MS.gene21450:intron | 20.0% |
| !! | ATTCAAAGATCATCATAAAT+TGG | + | chr5.1:7572072-7572091 | None:intergenic | 20.0% |
| !! | ATTTGTGCAAATTTGATTAT+CGG | - | chr5.1:7570732-7570751 | MS.gene21450:intron | 20.0% |
| !! | CCAAAAAAGTAATAAATGAA+TGG | - | chr5.1:7573922-7573941 | MS.gene21450:intron | 20.0% |
| !! | TTTATGATGATCTTTGAATA+TGG | - | chr5.1:7572073-7572092 | MS.gene21450:intron | 20.0% |
| !!! | ATTTCTTACTTAAAGTATCA+TGG | + | chr5.1:7572023-7572042 | None:intergenic | 20.0% |
| !!! | CCATTCATTTATTACTTTTT+TGG | + | chr5.1:7573925-7573944 | None:intergenic | 20.0% |
| !!! | CTTATTTTTATAAGAGTGTT+AGG | + | chr5.1:7571331-7571350 | None:intergenic | 20.0% |
| !!! | CTTTAATTTTTCTATATGCA+GGG | - | chr5.1:7573598-7573617 | MS.gene21450:intron | 20.0% |
| !!! | TATTTTATTAGGTGAAATCA+AGG | + | chr5.1:7571285-7571304 | None:intergenic | 20.0% |
| !!! | TGAATAAGTACTTTTTCTTA+AGG | - | chr5.1:7574335-7574354 | MS.gene21450:intron | 20.0% |
| !!! | TTGTTACCATATTTGATTTT+AGG | - | chr5.1:7573128-7573147 | MS.gene21450:intron | 20.0% |
| !!! | TTTCTTACTTAAAGTATCAT+GGG | + | chr5.1:7572022-7572041 | None:intergenic | 20.0% |
| ! | ACAAAAACTAGATGATTAGA+TGG | + | chr5.1:7572824-7572843 | None:intergenic | 25.0% |
| ! | ATCTCTTCAATATTAATGCT+GGG | - | chr5.1:7571649-7571668 | MS.gene21450:intron | 25.0% |
| ! | CATATATACTTGTATAGCAT+AGG | + | chr5.1:7573706-7573725 | None:intergenic | 25.0% |
| ! | CTAAATAATCAAATCCAAAC+AGG | - | chr5.1:7571409-7571428 | MS.gene21450:CDS | 25.0% |
| ! | TGGATACACAACTTAATTAA+GGG | - | chr5.1:7570897-7570916 | MS.gene21450:intron | 25.0% |
| ! | TTGAAAATACTAATCTGTCT+TGG | - | chr5.1:7573646-7573665 | MS.gene21450:intron | 25.0% |
| ! | TTGGATACACAACTTAATTA+AGG | - | chr5.1:7570896-7570915 | MS.gene21450:intron | 25.0% |
| !! | AAAACTTTTCCTACAAACAA+AGG | + | chr5.1:7573491-7573510 | None:intergenic | 25.0% |
| !! | ACAATGTTGTAATTTTCTCT+AGG | - | chr5.1:7573793-7573812 | MS.gene21450:intron | 25.0% |
| !! | ATTTGATTATTTAGCTTCGA+GGG | + | chr5.1:7571403-7571422 | None:intergenic | 25.0% |
| !! | CTAACACTCACTATTTTATT+AGG | + | chr5.1:7571296-7571315 | None:intergenic | 25.0% |
| !! | CTATGGATTATCTATACATT+TGG | - | chr5.1:7573758-7573777 | MS.gene21450:intron | 25.0% |
| !! | GCTTGATAGTTTATAAAAAG+AGG | - | chr5.1:7571159-7571178 | MS.gene21450:intron | 25.0% |
| !!! | AAAATACTGCAGTTTTTTCA+AGG | + | chr5.1:7572682-7572701 | None:intergenic | 25.0% |
| !!! | AAATACTGCAGTTTTTTCAA+GGG | + | chr5.1:7572681-7572700 | None:intergenic | 25.0% |
| !!! | AAATGCTTTGAATTTTGTAG+AGG | - | chr5.1:7573553-7573572 | MS.gene21450:intron | 25.0% |
| !!! | AATCTTTTAAAACTATGGCA+GGG | + | chr5.1:7574270-7574289 | None:intergenic | 25.0% |
| !!! | CAACATGCATTTTTGTTTTA+GGG | + | chr5.1:7571435-7571454 | None:intergenic | 25.0% |
| !!! | CTTTTTTGAAATTTCGTTCT+TGG | - | chr5.1:7574022-7574041 | MS.gene21450:intron | 25.0% |
| !!! | GCTTTAATTTTTCTATATGC+AGG | - | chr5.1:7573597-7573616 | MS.gene21450:intron | 25.0% |
| !!! | TCAACATGCATTTTTGTTTT+AGG | + | chr5.1:7571436-7571455 | None:intergenic | 25.0% |
| !!! | TGTTGACTTAAATTATATGG+TGG | - | chr5.1:7573419-7573438 | MS.gene21450:intron | 25.0% |
| AAAATACTAATCTGTCTTGG+TGG | - | chr5.1:7573649-7573668 | MS.gene21450:intron | 30.0% | |
| AAAATTCAGGCTGAAGTTAT+GGG | - | chr5.1:7572999-7573018 | MS.gene21450:CDS | 30.0% | |
| AATAGAGGATCAATAGACAT+GGG | - | chr5.1:7572478-7572497 | MS.gene21450:intron | 30.0% | |
| AATTCACCCCAATAAAAAAG+TGG | + | chr5.1:7571209-7571228 | None:intergenic | 30.0% | |
| ACTTCATTTATTCTCCTTGT+TGG | - | chr5.1:7572972-7572991 | MS.gene21450:CDS | 30.0% | |
| ACTTTGTCATTGAATCTTTC+TGG | - | chr5.1:7570696-7570715 | MS.gene21450:intron | 30.0% | |
| ATATGATTCCTTCATTGCTA+TGG | - | chr5.1:7573741-7573760 | MS.gene21450:intron | 30.0% | |
| ATCTTCATCAACATAGAAAG+AGG | + | chr5.1:7570468-7570487 | None:intergenic | 30.0% | |
| ATTCACCCCAATAAAAAAGT+GGG | + | chr5.1:7571208-7571227 | None:intergenic | 30.0% | |
| CGTGAATTTGCATATGAATT+TGG | + | chr5.1:7570193-7570212 | None:intergenic | 30.0% | |
| CTTTGTCATTGAATCTTTCT+GGG | - | chr5.1:7570697-7570716 | MS.gene21450:intron | 30.0% | |
| GATACTATTAACGTAATGAC+AGG | - | chr5.1:7572603-7572622 | MS.gene21450:intron | 30.0% | |
| GATCTCTTCAATATTAATGC+TGG | - | chr5.1:7571648-7571667 | MS.gene21450:intron | 30.0% | |
| GATGAGTAATGATTGAACAT+TGG | + | chr5.1:7573349-7573368 | None:intergenic | 30.0% | |
| GTTATGTAGATGAATGAACA+TGG | - | chr5.1:7570348-7570367 | MS.gene21450:intron | 30.0% | |
| TAAAATTCAGGCTGAAGTTA+TGG | - | chr5.1:7572998-7573017 | MS.gene21450:CDS | 30.0% | |
| TAAGTGTAGCATAAAAAGCT+GGG | + | chr5.1:7571885-7571904 | None:intergenic | 30.0% | |
| TACAATATCAGTTCAGAAGT+TGG | - | chr5.1:7572729-7572748 | MS.gene21450:intron | 30.0% | |
| TAGATAATCCATAGCAATGA+AGG | + | chr5.1:7573752-7573771 | None:intergenic | 30.0% | |
| TATTAACGTAATGACAGGAA+GGG | - | chr5.1:7572608-7572627 | MS.gene21450:intron | 30.0% | |
| TCAAGTACTCAATTTCCTTT+GGG | + | chr5.1:7573226-7573245 | None:intergenic | 30.0% | |
| TCATGACTTCTTAACAATGT+TGG | - | chr5.1:7574066-7574085 | MS.gene21450:intron | 30.0% | |
| TGAGAGCCTATACTTATTAA+TGG | - | chr5.1:7573887-7573906 | MS.gene21450:intron | 30.0% | |
| TGCAGACCTAAAATCAAATA+TGG | + | chr5.1:7573137-7573156 | None:intergenic | 30.0% | |
| TGCTATAAGTTCTGTAATTC+TGG | + | chr5.1:7571058-7571077 | None:intergenic | 30.0% | |
| TGTTCTTTACCTATCAACTA+TGG | - | chr5.1:7573369-7573388 | MS.gene21450:intron | 30.0% | |
| TTACATTGTAAGGTTCTGTT+TGG | - | chr5.1:7570877-7570896 | MS.gene21450:intron | 30.0% | |
| TTTATAGACCCCTAATACTA+AGG | - | chr5.1:7572444-7572463 | MS.gene21450:intron | 30.0% | |
| ! | ATAACTTCAGCCTGAATTTT+AGG | + | chr5.1:7572999-7573018 | None:intergenic | 30.0% |
| ! | GATTTGATTATTTAGCTTCG+AGG | + | chr5.1:7571404-7571423 | None:intergenic | 30.0% |
| ! | TGAAGAGCAATAGTTTCTTT+TGG | - | chr5.1:7572341-7572360 | MS.gene21450:intron | 30.0% |
| ! | TTAAATCTTTGGGCAAGTTT+TGG | - | chr5.1:7572042-7572061 | MS.gene21450:intron | 30.0% |
| !! | AGTGTCATTGTTGATTCAAT+TGG | + | chr5.1:7570297-7570316 | None:intergenic | 30.0% |
| !!! | CTAACACCCACTTTTTTATT+GGG | - | chr5.1:7571199-7571218 | MS.gene21450:intron | 30.0% |
| !!! | GAATCTTTTAAAACTATGGC+AGG | + | chr5.1:7574271-7574290 | None:intergenic | 30.0% |
| !!! | TAACACCCACTTTTTTATTG+GGG | - | chr5.1:7571200-7571219 | MS.gene21450:intron | 30.0% |
| !!! | TCTAACACCCACTTTTTTAT+TGG | - | chr5.1:7571198-7571217 | MS.gene21450:intron | 30.0% |
| AAAATCGCAACTTTGAATCC+TGG | + | chr5.1:7570420-7570439 | None:intergenic | 35.0% | |
| AACCATGTCCTTAGTATTAG+GGG | + | chr5.1:7572455-7572474 | None:intergenic | 35.0% | |
| AACGAATCACTACACGTATA+TGG | + | chr5.1:7570650-7570669 | None:intergenic | 35.0% | |
| AAGAGGTAAAATCGTGATTC+CGG | + | chr5.1:7573069-7573088 | None:intergenic | 35.0% | |
| AAGGAGGGAATAATGGTAAA+AGG | - | chr5.1:7572502-7572521 | MS.gene21450:intron | 35.0% | |
| AAGTGAGCATATTTGTGAGA+AGG | - | chr5.1:7572131-7572150 | MS.gene21450:intron | 35.0% | |
| ACGAATCACTACACGTATAT+GGG | + | chr5.1:7570649-7570668 | None:intergenic | 35.0% | |
| ACTAAATTGCTTACGTGCTT+AGG | - | chr5.1:7572212-7572231 | MS.gene21450:intron | 35.0% | |
| AGATGAAGAACAGAAACCAA+TGG | + | chr5.1:7570495-7570514 | None:intergenic | 35.0% | |
| AGATGATTAGATGGACGTAA+CGG | + | chr5.1:7572815-7572834 | None:intergenic | 35.0% | |
| AGGAGGGAATAATGGTAAAA+GGG | - | chr5.1:7572503-7572522 | MS.gene21450:intron | 35.0% | |
| ATAAAATGGTGAAACCCACA+TGG | + | chr5.1:7571232-7571251 | None:intergenic | 35.0% | |
| ATCAAGTTTACAATCGCCTT+AGG | + | chr5.1:7571714-7571733 | None:intergenic | 35.0% | |
| ATGTAGATGAATGAACATGG+TGG | - | chr5.1:7570351-7570370 | MS.gene21450:intron | 35.0% | |
| CAACCATGTCCTTAGTATTA+GGG | + | chr5.1:7572456-7572475 | None:intergenic | 35.0% | |
| CAAGTACTCAATTTCCTTTG+GGG | + | chr5.1:7573225-7573244 | None:intergenic | 35.0% | |
| CATACATACCACAAACGTAT+TGG | + | chr5.1:7571847-7571866 | None:intergenic | 35.0% | |
| CGAAGATTAAATCATCCCAT+TGG | - | chr5.1:7572248-7572267 | MS.gene21450:intron | 35.0% | |
| CTAATACTAAGGACATGGTT+GGG | - | chr5.1:7572455-7572474 | MS.gene21450:intron | 35.0% | |
| CTATTAACGTAATGACAGGA+AGG | - | chr5.1:7572607-7572626 | MS.gene21450:intron | 35.0% | |
| GAAAAACGTACCTTGAGATT+GGG | + | chr5.1:7570247-7570266 | None:intergenic | 35.0% | |
| GAATAGAGGATCAATAGACA+TGG | - | chr5.1:7572477-7572496 | MS.gene21450:intron | 35.0% | |
| GCTACACTTACATCATAACT+AGG | - | chr5.1:7571895-7571914 | MS.gene21450:intron | 35.0% | |
| GCTTGCATGGGAAAAAATTT+AGG | - | chr5.1:7573575-7573594 | MS.gene21450:intron | 35.0% | |
| GGTTTAACCTGAAATTTGAG+TGG | + | chr5.1:7573188-7573207 | None:intergenic | 35.0% | |
| GTAAGTGTAGCATAAAAAGC+TGG | + | chr5.1:7571886-7571905 | None:intergenic | 35.0% | |
| GTATCTGTGCTTACATTGTA+AGG | - | chr5.1:7570867-7570886 | MS.gene21450:intron | 35.0% | |
| GTCAAGTACTCAATTTCCTT+TGG | + | chr5.1:7573227-7573246 | None:intergenic | 35.0% | |
| GTGATTCGTTGTCATGAATT+TGG | - | chr5.1:7570660-7570679 | MS.gene21450:intron | 35.0% | |
| TACTTCTGATATCAGTCACA+TGG | - | chr5.1:7570542-7570561 | MS.gene21450:intron | 35.0% | |
| TATGATGTCGTTAATACTCC+TGG | - | chr5.1:7570516-7570535 | MS.gene21450:intron | 35.0% | |
| TCAACTGTTTCATAAAGTGC+AGG | - | chr5.1:7574106-7574125 | MS.gene21450:CDS | 35.0% | |
| TCACATATTGTATCGTAGTG+TGG | - | chr5.1:7572918-7572937 | MS.gene21450:CDS | 35.0% | |
| TCACTTTATACGTGTAACTG+CGG | + | chr5.1:7572117-7572136 | None:intergenic | 35.0% | |
| TCTTTACCTATCAACTATGG+CGG | - | chr5.1:7573372-7573391 | MS.gene21450:intron | 35.0% | |
| TGAAAAACGTACCTTGAGAT+TGG | + | chr5.1:7570248-7570267 | None:intergenic | 35.0% | |
| TGACAGATCGCATACAAAAT+GGG | - | chr5.1:7573243-7573262 | MS.gene21450:intron | 35.0% | |
| TGATTCAATTGGTTGCGTAA+TGG | + | chr5.1:7570286-7570305 | None:intergenic | 35.0% | |
| TGCATGTTGAACAATAGAGA+AGG | - | chr5.1:7571446-7571465 | MS.gene21450:intron | 35.0% | |
| TTAAAACTATGGCAGGGAAT+AGG | + | chr5.1:7574264-7574283 | None:intergenic | 35.0% | |
| TTGAACAATAGAGAAGGTCT+AGG | - | chr5.1:7571452-7571471 | MS.gene21450:intron | 35.0% | |
| TTGACAGATCGCATACAAAA+TGG | - | chr5.1:7573242-7573261 | MS.gene21450:intron | 35.0% | |
| ! | AATTTTGTAGAGGCTTGCAT+GGG | - | chr5.1:7573563-7573582 | MS.gene21450:intron | 35.0% |
| ! | ACTTTTCCTACAAACAAAGG+AGG | + | chr5.1:7573488-7573507 | None:intergenic | 35.0% |
| ! | AGGATCTAAGACATCCTTTA+TGG | + | chr5.1:7574244-7574263 | None:intergenic | 35.0% |
| ! | AGGATTCAAAGTTGCGATTT+TGG | - | chr5.1:7570419-7570438 | MS.gene21450:intron | 35.0% |
| ! | ATTTGGTAATCATTCCTGCT+GGG | - | chr5.1:7571595-7571614 | MS.gene21450:CDS | 35.0% |
| ! | CGTACTTTTGATGCAAAGAA+TGG | + | chr5.1:7574393-7574412 | None:intergenic | 35.0% |
| ! | GATTTTACCTCTTCTTTCTC+AGG | - | chr5.1:7573076-7573095 | MS.gene21450:CDS | 35.0% |
| ! | GGATTCAAAGTTGCGATTTT+GGG | - | chr5.1:7570420-7570439 | MS.gene21450:intron | 35.0% |
| ! | GTAATCATATGTGTCGTTGT+TGG | - | chr5.1:7570808-7570827 | MS.gene21450:CDS | 35.0% |
| ! | GTTGATGAAGATGAATCCAT+TGG | - | chr5.1:7570476-7570495 | MS.gene21450:CDS | 35.0% |
| ! | TGACATGACTAAGACGATTT+TGG | - | chr5.1:7571513-7571532 | MS.gene21450:intron | 35.0% |
| ! | TTCTATGACATTGCTTGTTG+AGG | - | chr5.1:7572852-7572871 | MS.gene21450:CDS | 35.0% |
| ! | TTTGCATCAAAAGTACGACT+TGG | - | chr5.1:7574396-7574415 | MS.gene21450:intron | 35.0% |
| !! | AAGTGAAAGCGTTATCCAAT+GGG | + | chr5.1:7572266-7572285 | None:intergenic | 35.0% |
| !! | ATGTGCATATGTTGATTCAC+AGG | - | chr5.1:7574196-7574215 | MS.gene21450:CDS | 35.0% |
| !!! | CTAAGACGATTTTGGTGTTT+AGG | - | chr5.1:7571521-7571540 | MS.gene21450:intron | 35.0% |
| !!! | TTTTTGTTTTAGGGCCTGTT+TGG | + | chr5.1:7571426-7571445 | None:intergenic | 35.0% |
| AAAGCTGGGCAGAAATTAGT+AGG | + | chr5.1:7571871-7571890 | None:intergenic | 40.0% | |
| AAGCAAAAGGAAGTTCGCAT+CGG | + | chr5.1:7571960-7571979 | None:intergenic | 40.0% | |
| AAGCATTCAAGCTTCGACTT+TGG | + | chr5.1:7574316-7574335 | None:intergenic | 40.0% | |
| AAGTTATGGGTCTTGATCCA+AGG | - | chr5.1:7573012-7573031 | MS.gene21450:CDS | 40.0% | |
| ACAGATCGCATACAAAATGG+GGG | - | chr5.1:7573245-7573264 | MS.gene21450:intron | 40.0% | |
| AGACATCCTTTATGGAAAGC+AGG | + | chr5.1:7574236-7574255 | None:intergenic | 40.0% | |
| AGATCATCTCTTGTCATTCC+AGG | + | chr5.1:7571633-7571652 | None:intergenic | 40.0% | |
| AGCATTCAAGCTTCGACTTT+GGG | + | chr5.1:7574315-7574334 | None:intergenic | 40.0% | |
| AGGATCAATAGACATGGGTA+AGG | - | chr5.1:7572483-7572502 | MS.gene21450:intron | 40.0% | |
| AGTTATGGGTCTTGATCCAA+GGG | - | chr5.1:7573013-7573032 | MS.gene21450:CDS | 40.0% | |
| ATAGGAACAGTGGAGTTAAC+TGG | + | chr5.1:7571744-7571763 | None:intergenic | 40.0% | |
| ATCAATAGACATGGGTAAGG+AGG | - | chr5.1:7572486-7572505 | MS.gene21450:intron | 40.0% | |
| ATGTAAGCACAGATACTCCT+CGG | + | chr5.1:7570863-7570882 | None:intergenic | 40.0% | |
| ATTGCTTACGTGCTTAGGTA+TGG | - | chr5.1:7572217-7572236 | MS.gene21450:intron | 40.0% | |
| CAAAGTCCTGCTTTCCATAA+AGG | - | chr5.1:7574227-7574246 | MS.gene21450:CDS | 40.0% | |
| CAGTTCAGAAGTTGGAATTC+TGG | - | chr5.1:7572737-7572756 | MS.gene21450:intron | 40.0% | |
| CCAACCATGTCCTTAGTATT+AGG | + | chr5.1:7572457-7572476 | None:intergenic | 40.0% | |
| CCTAATACTAAGGACATGGT+TGG | - | chr5.1:7572454-7572473 | MS.gene21450:intron | 40.0% | |
| CCTTGTTGGACCTAAAATTC+AGG | - | chr5.1:7572986-7573005 | MS.gene21450:CDS | 40.0% | |
| CGGTGATAGAAACTGGAATT+AGG | + | chr5.1:7572795-7572814 | None:intergenic | 40.0% | |
| CTCTTGTCATTCCAGGTTTA+CGG | + | chr5.1:7571626-7571645 | None:intergenic | 40.0% | |
| CTGATATCAGAAGTAACACC+AGG | + | chr5.1:7570537-7570556 | None:intergenic | 40.0% | |
| CTGATCATGCTTGAAGCAAA+AGG | + | chr5.1:7571973-7571992 | None:intergenic | 40.0% | |
| GAAATCGGTCGCACATAAAA+TGG | + | chr5.1:7571246-7571265 | None:intergenic | 40.0% | |
| GAAATTCCTCAACTCCGTTA+CGG | + | chr5.1:7574422-7574441 | None:intergenic | 40.0% | |
| GACAGATCGCATACAAAATG+GGG | - | chr5.1:7573244-7573263 | MS.gene21450:intron | 40.0% | |
| GAGGCTAATTGAATGTGAGT+TGG | - | chr5.1:7573520-7573539 | MS.gene21450:intron | 40.0% | |
| GGAGGGAATAATGGTAAAAG+GGG | - | chr5.1:7572504-7572523 | MS.gene21450:intron | 40.0% | |
| GTTGAGGAATTTCTTCCTCT+TGG | - | chr5.1:7574429-7574448 | MS.gene21450:CDS | 40.0% | |
| TAACTCCACTGTTCCTATTG+CGG | - | chr5.1:7571746-7571765 | MS.gene21450:intron | 40.0% | |
| TATGATCCCAAGAGACTGTT+GGG | - | chr5.1:7571795-7571814 | MS.gene21450:intron | 40.0% | |
| TATTGGGGTGAATTCCATGT+GGG | - | chr5.1:7571215-7571234 | MS.gene21450:intron | 40.0% | |
| TCAATAGACATGGGTAAGGA+GGG | - | chr5.1:7572487-7572506 | MS.gene21450:intron | 40.0% | |
| TCTGTCTTGGTGGAATGTAT+CGG | - | chr5.1:7573659-7573678 | MS.gene21450:intron | 40.0% | |
| TCTTGTCATTCCAGGTTTAC+GGG | + | chr5.1:7571625-7571644 | None:intergenic | 40.0% | |
| TGCACTTACAGGTATGGATT+TGG | - | chr5.1:7571578-7571597 | MS.gene21450:CDS | 40.0% | |
| TGGATCTGCAACACTATCAA+TGG | - | chr5.1:7573829-7573848 | MS.gene21450:intron | 40.0% | |
| TGTAATTCTGGCACTACTGA+TGG | + | chr5.1:7571046-7571065 | None:intergenic | 40.0% | |
| TTATGATCCCAAGAGACTGT+TGG | - | chr5.1:7571794-7571813 | MS.gene21450:intron | 40.0% | |
| TTATTGGGGTGAATTCCATG+TGG | - | chr5.1:7571214-7571233 | MS.gene21450:intron | 40.0% | |
| ! | AATTTTCTCTAGGCCAAAGC+TGG | - | chr5.1:7573803-7573822 | MS.gene21450:intron | 40.0% |
| ! | AGAAACTGGGTTGGAAAGAA+TGG | - | chr5.1:7572642-7572661 | MS.gene21450:intron | 40.0% |
| ! | GAAACTGGGTTGGAAAGAAT+GGG | - | chr5.1:7572643-7572662 | MS.gene21450:intron | 40.0% |
| ! | GAATTTTGTAGAGGCTTGCA+TGG | - | chr5.1:7573562-7573581 | MS.gene21450:intron | 40.0% |
| ! | GATTTGGTAATCATTCCTGC+TGG | - | chr5.1:7571594-7571613 | MS.gene21450:CDS | 40.0% |
| ! | GTTTAGGTTCGAGGATTCTT+GGG | - | chr5.1:7571537-7571556 | MS.gene21450:intron | 40.0% |
| ! | TGTTTAGGTTCGAGGATTCT+TGG | - | chr5.1:7571536-7571555 | MS.gene21450:intron | 40.0% |
| ! | TTTAGGTTCGAGGATTCTTG+GGG | - | chr5.1:7571538-7571557 | MS.gene21450:intron | 40.0% |
| ! | TTTGGTAATCATTCCTGCTG+GGG | - | chr5.1:7571596-7571615 | MS.gene21450:CDS | 40.0% |
| !! | AATTTCCTTTGGGGTGAAAG+AGG | + | chr5.1:7573216-7573235 | None:intergenic | 40.0% |
| !! | CAAGTGAAAGCGTTATCCAA+TGG | + | chr5.1:7572267-7572286 | None:intergenic | 40.0% |
| !! | CCTGAATTTTAGGTCCAACA+AGG | + | chr5.1:7572989-7573008 | None:intergenic | 40.0% |
| !! | GCATATGTTGATTCACAGGT+AGG | - | chr5.1:7574200-7574219 | MS.gene21450:CDS | 40.0% |
| !!! | GAAAAGTTTTGAGACTCGAG+AGG | - | chr5.1:7573501-7573520 | MS.gene21450:intron | 40.0% |
| !!! | GATTTTGGTGTTTAGGTTCG+AGG | - | chr5.1:7571528-7571547 | MS.gene21450:intron | 40.0% |
| AAACGTACCTTGAGATTGGG+AGG | + | chr5.1:7570244-7570263 | None:intergenic | 45.0% | |
| AAGGACATGGTTGGGAATAG+AGG | - | chr5.1:7572463-7572482 | MS.gene21450:intron | 45.0% | |
| AATGTTCATTGCCGTGCCAA+AGG | - | chr5.1:7570387-7570406 | MS.gene21450:intron | 45.0% | |
| ACCTCTGCCACTCAAATTTC+AGG | - | chr5.1:7573178-7573197 | MS.gene21450:intron | 45.0% | |
| ACCTGAAATTTGAGTGGCAG+AGG | + | chr5.1:7573182-7573201 | None:intergenic | 45.0% | |
| AGCTTAGAACAATGCTGAGC+TGG | - | chr5.1:7572541-7572560 | MS.gene21450:intron | 45.0% | |
| ATGGTCGTATAACCACACGT+TGG | - | chr5.1:7572172-7572191 | MS.gene21450:intron | 45.0% | |
| ATGTGGATGTTCCTGTTGTC+GGG | - | chr5.1:7573036-7573055 | MS.gene21450:CDS | 45.0% | |
| ATGTTCATTGCCGTGCCAAA+GGG | - | chr5.1:7570388-7570407 | MS.gene21450:intron | 45.0% | |
| ATTCTGGCACTACTGATGGA+AGG | + | chr5.1:7571042-7571061 | None:intergenic | 45.0% | |
| CAATCTTGATCACCAACGTG+TGG | + | chr5.1:7572187-7572206 | None:intergenic | 45.0% | |
| CATGGGTAAGGAGGGAATAA+TGG | - | chr5.1:7572495-7572514 | MS.gene21450:intron | 45.0% | |
| CTACACACAGAGAGTGGTAT+CGG | - | chr5.1:7572296-7572315 | MS.gene21450:intron | 45.0% | |
| CTTGTCATTCCAGGTTTACG+GGG | + | chr5.1:7571624-7571643 | None:intergenic | 45.0% | |
| GACAATGCTTGACGTGGTTA+GGG | - | chr5.1:7571821-7571840 | MS.gene21450:intron | 45.0% | |
| GACCCCTAATACTAAGGACA+TGG | - | chr5.1:7572450-7572469 | MS.gene21450:intron | 45.0% | |
| GACGTAACGGTGATAGAAAC+TGG | + | chr5.1:7572802-7572821 | None:intergenic | 45.0% | |
| GATGTGGATGTTCCTGTTGT+CGG | - | chr5.1:7573035-7573054 | MS.gene21450:CDS | 45.0% | |
| GATTGCAAAGCGATGTCCTA+AGG | - | chr5.1:7571695-7571714 | MS.gene21450:intron | 45.0% | |
| GGACTAACAAAGTCTGTCGT+AGG | - | chr5.1:7574356-7574375 | MS.gene21450:intron | 45.0% | |
| TAATCACTTAGGGGACCAAG+AGG | + | chr5.1:7574447-7574466 | None:intergenic | 45.0% | |
| TACACACAGAGAGTGGTATC+GGG | - | chr5.1:7572297-7572316 | MS.gene21450:intron | 45.0% | |
| TATCGGACACGACATAGACA+CGG | - | chr5.1:7570749-7570768 | MS.gene21450:intron | 45.0% | |
| TGACAATGCTTGACGTGGTT+AGG | - | chr5.1:7571820-7571839 | MS.gene21450:intron | 45.0% | |
| TGAGGATGCACTTACAGGTA+TGG | - | chr5.1:7571572-7571591 | MS.gene21450:CDS | 45.0% | |
| TTCAGACCGCCATAGTTGAT+AGG | + | chr5.1:7573381-7573400 | None:intergenic | 45.0% | |
| TTGAAAACCTCAGCCGCAAT+AGG | + | chr5.1:7571762-7571781 | None:intergenic | 45.0% | |
| ! | AAAGTACGACTTGGCCGTAA+CGG | - | chr5.1:7574405-7574424 | MS.gene21450:CDS | 45.0% |
| ! | ATATGTGCCACTGTTGTGTC+TGG | - | chr5.1:7571013-7571032 | MS.gene21450:intron | 45.0% |
| ! | GCTGAGGTTTTCAAAAGAGC+TGG | - | chr5.1:7571768-7571787 | MS.gene21450:intron | 45.0% |
| ! | GTGTCCCACACTTTGGAAAT+CGG | + | chr5.1:7571261-7571280 | None:intergenic | 45.0% |
| ! | TCCTCGGATTAGGAGTGTAA+CGG | + | chr5.1:7570847-7570866 | None:intergenic | 45.0% |
| ! | TGCACTCCTCCTTTGTTTGT+AGG | - | chr5.1:7573479-7573498 | MS.gene21450:intron | 45.0% |
| !! | CACACGTTGGTGATCAAGAT+TGG | - | chr5.1:7572185-7572204 | MS.gene21450:intron | 45.0% |
| AAGGACACCAGACACAACAG+TGG | + | chr5.1:7571023-7571042 | None:intergenic | 50.0% | |
| ACAGGAACATCCACATCCCT+TGG | + | chr5.1:7573032-7573051 | None:intergenic | 50.0% | |
| ACCTTCCTCTTTCACCCCAA+AGG | - | chr5.1:7573208-7573227 | MS.gene21450:intron | 50.0% | |
| ACGTAATGACAGGAAGGGTG+AGG | - | chr5.1:7572613-7572632 | MS.gene21450:intron | 50.0% | |
| AGAACAATGCTGAGCTGGCA+AGG | - | chr5.1:7572546-7572565 | MS.gene21450:intron | 50.0% | |
| CAGCTTGAGGATGCACTTAC+AGG | - | chr5.1:7571567-7571586 | MS.gene21450:CDS | 50.0% | |
| CCTCAATCCTCCCAATCTCA+AGG | - | chr5.1:7570234-7570253 | MS.gene21450:CDS | 50.0% | |
| CCTTGAGATTGGGAGGATTG+AGG | + | chr5.1:7570237-7570256 | None:intergenic | 50.0% | |
| CTTGGGGCAAAATCAGCTTG+AGG | - | chr5.1:7571554-7571573 | MS.gene21450:intron | 50.0% | |
| GCACAGATACTCCTCGGATT+AGG | + | chr5.1:7570857-7570876 | None:intergenic | 50.0% | |
| GCATGTCTTCGTGCGTTGAA+AGG | - | chr5.1:7574155-7574174 | MS.gene21450:CDS | 50.0% | |
| GGTTAGGGCCAATACGTTTG+TGG | - | chr5.1:7571836-7571855 | MS.gene21450:intron | 50.0% | |
| GTATCGTGAGCTAAGCGTCA+TGG | - | chr5.1:7572153-7572172 | MS.gene21450:intron | 50.0% | |
| GTCACTCCCAACAGTCTCTT+GGG | + | chr5.1:7571804-7571823 | None:intergenic | 50.0% | |
| GTGCAGACCTGAGAAAGAAG+AGG | + | chr5.1:7573086-7573105 | None:intergenic | 50.0% | |
| TCCGTTACACTCCTAATCCG+AGG | - | chr5.1:7570843-7570862 | MS.gene21450:intron | 50.0% | |
| TCTTCGTGCGTTGAAAGGAG+AGG | - | chr5.1:7574160-7574179 | MS.gene21450:CDS | 50.0% | |
| TGAGATTGGGAGGATTGAGG+TGG | + | chr5.1:7570234-7570253 | None:intergenic | 50.0% | |
| TGGGGGAACAGAAGTTGTTG+AGG | - | chr5.1:7573262-7573281 | MS.gene21450:intron | 50.0% | |
| TGTCACTCCCAACAGTCTCT+TGG | + | chr5.1:7571805-7571824 | None:intergenic | 50.0% | |
| TGTGGATGTTCCTGTTGTCG+GGG | - | chr5.1:7573037-7573056 | MS.gene21450:CDS | 50.0% | |
| TGTTCATTGCCGTGCCAAAG+GGG | - | chr5.1:7570389-7570408 | MS.gene21450:intron | 50.0% | |
| ! | CACTTGCTACACACAGAGAG+TGG | - | chr5.1:7572290-7572309 | MS.gene21450:intron | 50.0% |
| ! | CGTGCTTAGGTATGGTTCTG+TGG | - | chr5.1:7572225-7572244 | MS.gene21450:intron | 50.0% |
| ! | GCGACCGATTTCCAAAGTGT+GGG | - | chr5.1:7571254-7571273 | MS.gene21450:intron | 50.0% |
| ! | TGCGACCGATTTCCAAAGTG+TGG | - | chr5.1:7571253-7571272 | MS.gene21450:intron | 50.0% |
| ! | TTTGGGGTGAAAGAGGAAGG+TGG | + | chr5.1:7573209-7573228 | None:intergenic | 50.0% |
| !! | TCCTTTGGGGTGAAAGAGGA+AGG | + | chr5.1:7573212-7573231 | None:intergenic | 50.0% |
| AATGACAGGAAGGGTGAGGC+TGG | - | chr5.1:7572617-7572636 | MS.gene21450:intron | 55.0% | |
| AGCAGAGAGGCTGGAGTAGT+AGG | - | chr5.1:7573450-7573469 | MS.gene21450:intron | 55.0% | |
| AGCTGGCAAGGAGTTGTGGA+TGG | - | chr5.1:7572558-7572577 | MS.gene21450:intron | 55.0% | |
| ATGACAGGAAGGGTGAGGCT+GGG | - | chr5.1:7572618-7572637 | MS.gene21450:intron | 55.0% | |
| ATTGGGAGGATTGAGGTGGC+TGG | + | chr5.1:7570230-7570249 | None:intergenic | 55.0% | |
| CACTGTTCCTATTGCGGCTG+AGG | - | chr5.1:7571752-7571771 | MS.gene21450:intron | 55.0% | |
| CTCAGCCGCAATAGGAACAG+TGG | + | chr5.1:7571754-7571773 | None:intergenic | 55.0% | |
| GAATCCTGGTGATCCCCCTT+TGG | + | chr5.1:7570406-7570425 | None:intergenic | 55.0% | |
| GGGAGTGACAATGCTTGACG+TGG | - | chr5.1:7571815-7571834 | MS.gene21450:intron | 55.0% | |
| GGGTCTTGATCCAAGGGATG+TGG | - | chr5.1:7573019-7573038 | MS.gene21450:CDS | 55.0% | |
| GTGGATGTTCCTGTTGTCGG+GGG | - | chr5.1:7573038-7573057 | MS.gene21450:CDS | 55.0% | |
| GTTCATTGCCGTGCCAAAGG+GGG | - | chr5.1:7570390-7570409 | MS.gene21450:intron | 55.0% | |
| TCAAGGCGTGTCCCACACTT+TGG | + | chr5.1:7571268-7571287 | None:intergenic | 55.0% | |
| TGCAGATCCAGCTCCAGCTT+TGG | + | chr5.1:7573819-7573838 | None:intergenic | 55.0% | |
| ! | ACTTGGCCGTAACGGAGTTG+AGG | - | chr5.1:7574413-7574432 | MS.gene21450:CDS | 55.0% |
| !! | GTTGCGATTTTGGGTGCTGC+TGG | - | chr5.1:7570429-7570448 | MS.gene21450:intron | 55.0% |
| AGGCTGGGCAGAAACTGGGT+TGG | - | chr5.1:7572633-7572652 | MS.gene21450:intron | 60.0% | |
| CTCTAGGCCAAAGCTGGAGC+TGG | - | chr5.1:7573809-7573828 | MS.gene21450:intron | 60.0% | |
| CTGGTGATCCCCCTTTGGCA+CGG | + | chr5.1:7570401-7570420 | None:intergenic | 60.0% | |
| GCTGAGCTGGCAAGGAGTTG+TGG | - | chr5.1:7572554-7572573 | MS.gene21450:intron | 60.0% | |
| GGTGAGGCTGGGCAGAAACT+GGG | - | chr5.1:7572629-7572648 | MS.gene21450:intron | 60.0% | |
| GGTGGTGAGAGACAGCAGAG+AGG | - | chr5.1:7573437-7573456 | MS.gene21450:intron | 60.0% | |
| GTGAGAGACAGCAGAGAGGC+TGG | - | chr5.1:7573441-7573460 | MS.gene21450:intron | 60.0% | |
| !! | TTGGGTGCTGCTGGTGGCAT+AGG | - | chr5.1:7570438-7570457 | MS.gene21450:intron | 60.0% |
| !!! | GCGATTTTGGGTGCTGCTGG+TGG | - | chr5.1:7570432-7570451 | MS.gene21450:intron | 60.0% |
| CCTGTTGTCGGGGGACATGC+CGG | - | chr5.1:7573047-7573066 | MS.gene21450:CDS | 65.0% | |
| CGTGCCAAAGGGGGATCACC+AGG | - | chr5.1:7570399-7570418 | MS.gene21450:intron | 65.0% | |
| GCTGGGGTTCCCCGTAAACC+TGG | - | chr5.1:7571612-7571631 | MS.gene21450:CDS | 65.0% | |
| GGGTGAGGCTGGGCAGAAAC+TGG | - | chr5.1:7572628-7572647 | MS.gene21450:intron | 65.0% | |
| GGTTTACGGGGAACCCCAGC+AGG | + | chr5.1:7571612-7571631 | None:intergenic | 65.0% | |
| CCGGCATGTCCCCCGACAAC+AGG | + | chr5.1:7573050-7573069 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 7570184 | 7574472 | 7570184 | ID=MS.gene21450 |
| chr5.1 | mRNA | 7570184 | 7574472 | 7570184 | ID=MS.gene21450.t1;Parent=MS.gene21450 |
| chr5.1 | exon | 7574401 | 7574472 | 7574401 | ID=MS.gene21450.t1.exon1;Parent=MS.gene21450.t1 |
| chr5.1 | CDS | 7574401 | 7574472 | 7574401 | ID=cds.MS.gene21450.t1;Parent=MS.gene21450.t1 |
| chr5.1 | exon | 7574078 | 7574299 | 7574078 | ID=MS.gene21450.t1.exon2;Parent=MS.gene21450.t1 |
| chr5.1 | CDS | 7574078 | 7574299 | 7574078 | ID=cds.MS.gene21450.t1;Parent=MS.gene21450.t1 |
| chr5.1 | exon | 7572799 | 7573113 | 7572799 | ID=MS.gene21450.t1.exon3;Parent=MS.gene21450.t1 |
| chr5.1 | CDS | 7572799 | 7573113 | 7572799 | ID=cds.MS.gene21450.t1;Parent=MS.gene21450.t1 |
| chr5.1 | exon | 7571559 | 7571648 | 7571559 | ID=MS.gene21450.t1.exon4;Parent=MS.gene21450.t1 |
| chr5.1 | CDS | 7571559 | 7571648 | 7571559 | ID=cds.MS.gene21450.t1;Parent=MS.gene21450.t1 |
| chr5.1 | exon | 7571373 | 7571456 | 7571373 | ID=MS.gene21450.t1.exon5;Parent=MS.gene21450.t1 |
| chr5.1 | CDS | 7571373 | 7571456 | 7571373 | ID=cds.MS.gene21450.t1;Parent=MS.gene21450.t1 |
| chr5.1 | exon | 7570806 | 7570841 | 7570806 | ID=MS.gene21450.t1.exon6;Parent=MS.gene21450.t1 |
| chr5.1 | CDS | 7570806 | 7570841 | 7570806 | ID=cds.MS.gene21450.t1;Parent=MS.gene21450.t1 |
| chr5.1 | exon | 7570439 | 7570528 | 7570439 | ID=MS.gene21450.t1.exon7;Parent=MS.gene21450.t1 |
| chr5.1 | CDS | 7570439 | 7570528 | 7570439 | ID=cds.MS.gene21450.t1;Parent=MS.gene21450.t1 |
| chr5.1 | exon | 7570184 | 7570278 | 7570184 | ID=MS.gene21450.t1.exon8;Parent=MS.gene21450.t1 |
| chr5.1 | CDS | 7570184 | 7570278 | 7570184 | ID=cds.MS.gene21450.t1;Parent=MS.gene21450.t1 |
| Gene Sequence |
| Protein sequence |
