Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20038.t1 | XP_003625583.1 | 93.8 | 611 | 37 | 1 | 1 | 611 | 1 | 610 | 2.50E-231 | 811.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20038.t1 | Q9ZQC5 | 36.0 | 625 | 340 | 8 | 1 | 609 | 1 | 581 | 3.8e-55 | 217.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20038.t1 | G7L1R0 | 93.8 | 611 | 37 | 1 | 1 | 611 | 1 | 610 | 1.8e-231 | 811.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04985 | MS.gene20038 | 0.803713 | 3.06E-49 | -1.69E-46 |
| MS.gene053348 | MS.gene20038 | 0.813655 | 2.29E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene20038 | 0.818248 | 2.16E-52 | -1.69E-46 |
| MS.gene055957 | MS.gene20038 | 0.804815 | 1.80E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene20038 | 0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene056042 | MS.gene20038 | 0.812397 | 4.33E-51 | -1.69E-46 |
| MS.gene056870 | MS.gene20038 | 0.819511 | 1.12E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31930 | MS.gene20038 | PPI |
| MS.gene20038 | MS.gene064148 | PPI |
| MS.gene030154 | MS.gene20038 | PPI |
| MS.gene31961 | MS.gene20038 | PPI |
| MS.gene20038 | MS.gene56986 | PPI |
| MS.gene009801 | MS.gene20038 | PPI |
| MS.gene54155 | MS.gene20038 | PPI |
| MS.gene015702 | MS.gene20038 | PPI |
| MS.gene029217 | MS.gene20038 | PPI |
| MS.gene23912 | MS.gene20038 | PPI |
| MS.gene065074 | MS.gene20038 | PPI |
| MS.gene037356 | MS.gene20038 | PPI |
| MS.gene68625 | MS.gene20038 | PPI |
| MS.gene20038 | MS.gene76250 | PPI |
| MS.gene034650 | MS.gene20038 | PPI |
| MS.gene063692 | MS.gene20038 | PPI |
| MS.gene33795 | MS.gene20038 | PPI |
| MS.gene93135 | MS.gene20038 | PPI |
| MS.gene05775 | MS.gene20038 | PPI |
| MS.gene048551 | MS.gene20038 | PPI |
| MS.gene39455 | MS.gene20038 | PPI |
| MS.gene029219 | MS.gene20038 | PPI |
| MS.gene39229 | MS.gene20038 | PPI |
| MS.gene50208 | MS.gene20038 | PPI |
| MS.gene008635 | MS.gene20038 | PPI |
| MS.gene03912 | MS.gene20038 | PPI |
| MS.gene020474 | MS.gene20038 | PPI |
| MS.gene57038 | MS.gene20038 | PPI |
| MS.gene26785 | MS.gene20038 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20038.t1 | MTR_7g100730 | 94.763 | 611 | 31 | 1 | 1 | 611 | 1 | 610 | 0.0 | 1068 |
| MS.gene20038.t1 | MTR_7g061150 | 93.681 | 364 | 22 | 1 | 248 | 611 | 1 | 363 | 0.0 | 637 |
| MS.gene20038.t1 | MTR_1g066850 | 60.995 | 623 | 194 | 7 | 1 | 611 | 1 | 586 | 0.0 | 633 |
| MS.gene20038.t1 | MTR_4g461060 | 45.151 | 629 | 312 | 7 | 1 | 608 | 1 | 617 | 2.75e-147 | 439 |
| MS.gene20038.t1 | MTR_4g461060 | 46.367 | 578 | 281 | 5 | 51 | 608 | 46 | 614 | 2.48e-144 | 432 |
| MS.gene20038.t1 | MTR_2g093260 | 41.706 | 422 | 216 | 10 | 195 | 608 | 83 | 482 | 7.89e-71 | 237 |
| MS.gene20038.t1 | MTR_2g093240 | 42.857 | 112 | 30 | 2 | 499 | 610 | 3 | 80 | 2.18e-17 | 77.8 |
| MS.gene20038.t1 | MTR_2g093250 | 45.098 | 102 | 52 | 2 | 309 | 410 | 112 | 209 | 2.68e-14 | 73.2 |
| MS.gene20038.t1 | MTR_5g007350 | 31.278 | 227 | 125 | 6 | 21 | 222 | 43 | 263 | 4.59e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20038.t1 | AT2G37080 | 48.259 | 632 | 253 | 14 | 1 | 610 | 1 | 580 | 9.15e-160 | 470 |
| MS.gene20038.t1 | AT2G37080 | 48.107 | 634 | 253 | 15 | 1 | 610 | 1 | 582 | 1.17e-157 | 465 |
| MS.gene20038.t1 | AT2G37080 | 48.107 | 634 | 253 | 15 | 1 | 610 | 1 | 582 | 1.17e-157 | 465 |
| MS.gene20038.t1 | AT5G60210 | 39.773 | 616 | 308 | 10 | 1 | 608 | 1 | 561 | 3.71e-110 | 342 |
| MS.gene20038.t1 | AT5G60210 | 39.773 | 616 | 308 | 10 | 1 | 608 | 1 | 561 | 3.71e-110 | 342 |
| MS.gene20038.t1 | AT5G60210 | 39.773 | 616 | 308 | 10 | 1 | 608 | 1 | 561 | 3.71e-110 | 342 |
| MS.gene20038.t1 | AT5G60210 | 39.773 | 616 | 308 | 10 | 1 | 608 | 1 | 561 | 3.71e-110 | 342 |
| MS.gene20038.t1 | AT5G60210 | 39.116 | 611 | 309 | 10 | 6 | 608 | 30 | 585 | 3.16e-106 | 333 |
| MS.gene20038.t1 | AT5G60210 | 39.116 | 611 | 309 | 10 | 6 | 608 | 30 | 585 | 3.16e-106 | 333 |
| MS.gene20038.t1 | AT3G53350 | 38.655 | 357 | 171 | 16 | 1 | 336 | 1 | 330 | 1.89e-43 | 160 |
| MS.gene20038.t1 | AT3G53350 | 35.955 | 356 | 106 | 11 | 261 | 610 | 154 | 393 | 2.20e-36 | 140 |
| MS.gene20038.t1 | AT3G53350 | 38.655 | 357 | 171 | 16 | 1 | 336 | 1 | 330 | 1.89e-43 | 160 |
| MS.gene20038.t1 | AT3G53350 | 35.955 | 356 | 106 | 11 | 261 | 610 | 154 | 393 | 2.20e-36 | 140 |
| MS.gene20038.t1 | AT3G53350 | 38.440 | 359 | 171 | 17 | 1 | 336 | 1 | 332 | 1.04e-41 | 155 |
| MS.gene20038.t1 | AT3G53350 | 32.353 | 476 | 185 | 14 | 145 | 610 | 47 | 395 | 7.19e-37 | 142 |
| MS.gene20038.t1 | AT3G53350 | 38.440 | 359 | 171 | 17 | 1 | 336 | 1 | 332 | 1.04e-41 | 155 |
| MS.gene20038.t1 | AT3G53350 | 32.353 | 476 | 185 | 14 | 145 | 610 | 47 | 395 | 7.19e-37 | 142 |
| MS.gene20038.t1 | AT3G53350 | 38.440 | 359 | 171 | 17 | 1 | 336 | 1 | 332 | 1.04e-41 | 155 |
| MS.gene20038.t1 | AT3G53350 | 32.353 | 476 | 185 | 14 | 145 | 610 | 47 | 395 | 7.19e-37 | 142 |
| MS.gene20038.t1 | AT3G53350 | 37.892 | 351 | 170 | 16 | 7 | 336 | 18 | 341 | 5.67e-39 | 148 |
| MS.gene20038.t1 | AT3G53350 | 35.955 | 356 | 106 | 11 | 261 | 610 | 165 | 404 | 4.94e-36 | 140 |
| MS.gene20038.t1 | AT3G53350 | 35.659 | 387 | 171 | 17 | 1 | 336 | 1 | 360 | 2.51e-37 | 144 |
| MS.gene20038.t1 | AT3G53350 | 35.955 | 356 | 106 | 11 | 261 | 610 | 184 | 423 | 9.78e-36 | 139 |
| MS.gene20038.t1 | AT3G53350 | 37.677 | 353 | 170 | 17 | 7 | 336 | 18 | 343 | 3.19e-37 | 143 |
| MS.gene20038.t1 | AT3G53350 | 32.773 | 476 | 183 | 15 | 145 | 610 | 58 | 406 | 2.61e-36 | 140 |
| MS.gene20038.t1 | AT3G53350 | 37.677 | 353 | 170 | 17 | 7 | 336 | 18 | 343 | 3.19e-37 | 143 |
| MS.gene20038.t1 | AT3G53350 | 32.773 | 476 | 183 | 15 | 145 | 610 | 58 | 406 | 2.61e-36 | 140 |
| MS.gene20038.t1 | AT1G78430 | 34.118 | 170 | 99 | 3 | 440 | 608 | 163 | 320 | 3.36e-16 | 80.5 |
| MS.gene20038.t1 | AT1G17140 | 35.028 | 177 | 95 | 7 | 440 | 608 | 176 | 340 | 1.29e-12 | 70.1 |
| MS.gene20038.t1 | AT1G17140 | 35.028 | 177 | 95 | 7 | 440 | 608 | 176 | 340 | 1.29e-12 | 70.1 |
Find 116 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTCCTTTGGGACATTTC+TGG | 0.159645 | 7.2:-11420516 | None:intergenic |
| CAGGAAAATGAGGAGATAAA+TGG | 0.230127 | 7.2:+11422097 | MS.gene20038:CDS |
| TCACGAGCTTTAGAAGTAAT+TGG | 0.259559 | 7.2:+11421887 | MS.gene20038:CDS |
| TACAATCTTTACCTTGCTTT+TGG | 0.268708 | 7.2:-11419911 | None:intergenic |
| GTCTGATCATGCTCAGATTC+AGG | 0.282526 | 7.2:+11421784 | MS.gene20038:CDS |
| TCATCTGTGTCTTCTAAATA+AGG | 0.285675 | 7.2:-11422913 | None:intergenic |
| CAGAGTTGGAAGCCGAATTA+AGG | 0.288025 | 7.2:+11422740 | MS.gene20038:CDS |
| CAATTTATGTATTTCATTCA+TGG | 0.304232 | 7.2:-11421705 | None:intergenic |
| GTTTCAAATACCTCAGATAT+TGG | 0.308574 | 7.2:-11420681 | None:intergenic |
| GGTATCTTTCTTATGGGGTT+TGG | 0.312528 | 7.2:-11420612 | None:intergenic |
| AACTTTCAATCTCCTTAATT+CGG | 0.325865 | 7.2:-11422752 | None:intergenic |
| ACTTTCGGACTCATGTCTTT+TGG | 0.331128 | 7.2:-11420633 | None:intergenic |
| AATCCATTGAGTGTTGCTTT+TGG | 0.338326 | 7.2:-11421664 | None:intergenic |
| CAACTGCTCTACTTCAGATT+TGG | 0.349820 | 7.2:-11422143 | None:intergenic |
| GCCTAGCAAGGTTCAGGAAT+TGG | 0.353929 | 7.2:+11421388 | MS.gene20038:CDS |
| AACCTGCGTTCGTTTACTTT+CGG | 0.363041 | 7.2:-11420648 | None:intergenic |
| TAGTGAAGCTATCTCTGTTA+TGG | 0.380107 | 7.2:+11421823 | MS.gene20038:CDS |
| TTCTTGAAGTCGTGCTTCTT+CGG | 0.385930 | 7.2:-11421585 | None:intergenic |
| TTGTAGCAAGTGATTTCCTT+TGG | 0.389125 | 7.2:-11420527 | None:intergenic |
| TATCCTCAAGATGGAGATAA+AGG | 0.393747 | 7.2:+11422546 | MS.gene20038:CDS |
| GAAGCGGCCTAGCAAGGTTC+AGG | 0.395117 | 7.2:+11421382 | MS.gene20038:CDS |
| CAGAGTTTGGTGTCTTCAAC+TGG | 0.396120 | 7.2:-11420566 | None:intergenic |
| TTCTAATCTGCAATGTGCTC+TGG | 0.400148 | 7.2:-11422213 | None:intergenic |
| TTGGGACATTTCTGGAGCAC+TGG | 0.401520 | 7.2:-11420508 | None:intergenic |
| TGGCAAAATGCAAATGCAAT+TGG | 0.415697 | 7.2:+11421907 | MS.gene20038:CDS |
| TAGAAGTGCTTACGAACAAC+TGG | 0.419369 | 7.2:+11422231 | MS.gene20038:CDS |
| TGTAGCAAGTGATTTCCTTT+GGG | 0.423596 | 7.2:-11420526 | None:intergenic |
| CTGAGAAAGTCCCTTTCCAT+TGG | 0.424088 | 7.2:-11422077 | None:intergenic |
| TACTTCTAAAGCTCGTGATT+CGG | 0.433669 | 7.2:-11421882 | None:intergenic |
| TCTTATGGGGTTTGGTGAGG+AGG | 0.433762 | 7.2:-11420604 | None:intergenic |
| GTTGTTAGCCTGAGAAAATT+CGG | 0.437251 | 7.2:-11421756 | None:intergenic |
| CTCAATGGATTCATCTGCTC+TGG | 0.446414 | 7.2:+11421676 | MS.gene20038:CDS |
| GCCGAGTTAGAACCAGAGTT+TGG | 0.447004 | 7.2:-11420579 | None:intergenic |
| CAATGGAAAGGGACTTTCTC+AGG | 0.447323 | 7.2:+11422078 | MS.gene20038:CDS |
| TTCCTCTTGGTATCTTATCT+CGG | 0.450936 | 7.2:-11422185 | None:intergenic |
| AGGAAAATGAGGAGATAAAT+GGG | 0.455434 | 7.2:+11422098 | MS.gene20038:CDS |
| CGAACAGCTAGATGCTGCTC+AGG | 0.462034 | 7.2:+11422708 | MS.gene20038:CDS |
| ATCTCAATTGCTGAGTTTGT+CGG | 0.465945 | 7.2:+11422360 | MS.gene20038:CDS |
| TATGGGGTTTGGTGAGGAGG+AGG | 0.467777 | 7.2:-11420601 | None:intergenic |
| CTTTCTTATGGGGTTTGGTG+AGG | 0.468528 | 7.2:-11420607 | None:intergenic |
| GACAAAACTTAGCTATGTAA+TGG | 0.470384 | 7.2:+11422645 | MS.gene20038:CDS |
| AAAATCTCAAGCAAAATCCT+TGG | 0.473358 | 7.2:+11422021 | MS.gene20038:CDS |
| TGCTCTGGATGTATTCCTCT+TGG | 0.476597 | 7.2:-11422198 | None:intergenic |
| CTGAATTATACGAGGAATTG+AGG | 0.480140 | 7.2:+11422287 | MS.gene20038:CDS |
| TGCAGCCCTTGCTGTTTCAA+CGG | 0.480256 | 7.2:-11422608 | None:intergenic |
| GAGTTTGTCGGCGGAGAATG+AGG | 0.485321 | 7.2:+11422372 | MS.gene20038:CDS |
| AAAAGCAAGCCTGATGGAAA+AGG | 0.487342 | 7.2:+11422336 | MS.gene20038:CDS |
| AGAACTCAGTAAAATATCTC+AGG | 0.492404 | 7.2:+11421604 | MS.gene20038:CDS |
| CTGAGCAGCATCTAGCTGTT+CGG | 0.497006 | 7.2:-11422707 | None:intergenic |
| CTTTCTACCACCGGAAACAA+TGG | 0.502144 | 7.2:+11422820 | MS.gene20038:CDS |
| TAATTCAGCCTCTCTCTCAC+TGG | 0.507829 | 7.2:-11422272 | None:intergenic |
| AAGTCGTGCTTCTTCGGAAG+CGG | 0.510056 | 7.2:-11421579 | None:intergenic |
| TTCAACTGGCGAGCAGTTCG+AGG | 0.516234 | 7.2:-11420552 | None:intergenic |
| ATCTCAAGCAAAATCCTTGG+AGG | 0.518596 | 7.2:+11422024 | MS.gene20038:CDS |
| TGTCCAAAAGCAACACTCAA+TGG | 0.521199 | 7.2:+11421661 | MS.gene20038:CDS |
| CTTGACACTGATTCAACCAA+TGG | 0.522965 | 7.2:+11422061 | MS.gene20038:CDS |
| AACTTAACTCATCGGAGTCA+TGG | 0.524619 | 7.2:+11421459 | MS.gene20038:CDS |
| TCCAATTCCTGAACCTTGCT+AGG | 0.525939 | 7.2:-11421389 | None:intergenic |
| CAAGATGGAGATAAAGGAGT+TGG | 0.532655 | 7.2:+11422552 | MS.gene20038:CDS |
| ACTGTCCCTGTCAAAAGAGC+TGG | 0.533173 | 7.2:+11421526 | MS.gene20038:CDS |
| GGGACTTTCTCAGGAAAATG+AGG | 0.534716 | 7.2:+11422087 | MS.gene20038:CDS |
| AGAAAACAGTATCCTCAAGA+TGG | 0.537638 | 7.2:+11422537 | MS.gene20038:CDS |
| CGAAAAGCGATCTACTGAAA+GGG | 0.538038 | 7.2:+11422414 | MS.gene20038:CDS |
| AGAGCAGTTGAAATCTGCAT+TGG | 0.538094 | 7.2:+11422156 | MS.gene20038:CDS |
| ATCAGAATCCAGTGAGAGAG+AGG | 0.548200 | 7.2:+11422264 | MS.gene20038:CDS |
| ACTGATTCAACCAATGGAAA+GGG | 0.548724 | 7.2:+11422067 | MS.gene20038:CDS |
| GGAAACAATGGAAAATGTGT+AGG | 0.557199 | 7.2:+11422832 | MS.gene20038:CDS |
| AGTTTGTCGGCGGAGAATGA+GGG | 0.561099 | 7.2:+11422373 | MS.gene20038:CDS |
| CACTGATTCAACCAATGGAA+AGG | 0.561480 | 7.2:+11422066 | MS.gene20038:CDS |
| ATGCTCAGATTCAGGACTTG+AGG | 0.568384 | 7.2:+11421792 | MS.gene20038:CDS |
| AAGGTCCGAAAACTGTTGAC+GGG | 0.568934 | 7.2:-11421555 | None:intergenic |
| ATGGAAGACAAAAGTTCAAG+AGG | 0.570660 | 7.2:+11421478 | MS.gene20038:CDS |
| GAAACAATGGAAAATGTGTA+GGG | 0.570873 | 7.2:+11422833 | MS.gene20038:CDS |
| TTAGAAGAAGCGGCCTAGCA+AGG | 0.573141 | 7.2:+11421376 | MS.gene20038:intron |
| AAAGGTCCGAAAACTGTTGA+CGG | 0.573588 | 7.2:-11421556 | None:intergenic |
| GCAGAATAAAATCATTGAAG+AGG | 0.574090 | 7.2:+11422576 | MS.gene20038:CDS |
| ACCAAACTCTGGTTCTAACT+CGG | 0.577387 | 7.2:+11420578 | MS.gene20038:CDS |
| ACTCCTTTATCTCCATCTTG+AGG | 0.578972 | 7.2:-11422549 | None:intergenic |
| ACGAAAAGCGATCTACTGAA+AGG | 0.581466 | 7.2:+11422413 | MS.gene20038:CDS |
| GAATTGAGGAAAGCTATAGC+TGG | 0.584443 | 7.2:+11422301 | MS.gene20038:CDS |
| TTTCCTCACAAGTTCCTCCA+AGG | 0.584609 | 7.2:-11422038 | None:intergenic |
| TTGAGTCCGTTGAAACAGCA+AGG | 0.588804 | 7.2:+11422602 | MS.gene20038:CDS |
| CAGTTGAAGACACCAAACTC+TGG | 0.589837 | 7.2:+11420567 | MS.gene20038:CDS |
| CTCAGGATCGAGATCGTGCA+TGG | 0.590550 | 7.2:+11421621 | MS.gene20038:CDS |
| TCAGGCTGCAAATTCAGAGT+TGG | 0.590572 | 7.2:+11422726 | MS.gene20038:CDS |
| TAGCTATGTAATGGAAGAAG+CGG | 0.596332 | 7.2:+11422654 | MS.gene20038:CDS |
| TTGCTCCAACTCAAAAGCTA+AGG | 0.601046 | 7.2:-11421996 | None:intergenic |
| AGAGCTAAAAGCAAGCCTGA+TGG | 0.601156 | 7.2:+11422330 | MS.gene20038:CDS |
| GTGCTTCTTCGGAAGCGGAA+AGG | 0.601435 | 7.2:-11421574 | None:intergenic |
| AGAAGATCTGAAGAGTGCTA+AGG | 0.601647 | 7.2:+11421433 | MS.gene20038:CDS |
| TAAGGATCAACTTAACTCAT+CGG | 0.603512 | 7.2:+11421451 | MS.gene20038:CDS |
| GTGGAGACACTCCGATCGGA+TGG | 0.605316 | 7.2:+11421947 | MS.gene20038:CDS |
| GCATCTATACTTTCTACCAC+CGG | 0.615034 | 7.2:+11422811 | MS.gene20038:CDS |
| GACAGTGGAGACACTCCGAT+CGG | 0.616285 | 7.2:+11421943 | MS.gene20038:CDS |
| TGCATGGCAATCTGAACTTG+AGG | 0.624261 | 7.2:+11421637 | MS.gene20038:CDS |
| AGAAGATTGGAGTGTTGTGG+AGG | 0.624386 | 7.2:+11422971 | MS.gene20038:CDS |
| GTTTGTCGGCGGAGAATGAG+GGG | 0.630308 | 7.2:+11422374 | MS.gene20038:CDS |
| TTATGCAGACACCAAAAGCA+AGG | 0.637953 | 7.2:+11419900 | None:intergenic |
| TGAAAGTTCAGTCTGATCAG+TGG | 0.639619 | 7.2:+11422767 | MS.gene20038:CDS |
| TCAATTGCTGAGTTTGTCGG+CGG | 0.644952 | 7.2:+11422363 | MS.gene20038:CDS |
| TGATCAGTGGAGAAAAGCAG+CGG | 0.646992 | 7.2:+11422780 | MS.gene20038:CDS |
| ATCACACAGTCCAATATCTG+AGG | 0.647969 | 7.2:+11420671 | MS.gene20038:CDS |
| AATCCTTGGAGGAACTTGTG+AGG | 0.648483 | 7.2:+11422035 | MS.gene20038:CDS |
| TCAGATTCAGGACTTGAGGA+TGG | 0.651660 | 7.2:+11421796 | MS.gene20038:CDS |
| TCAGTGGAGAAAAGCAGCGG+AGG | 0.652899 | 7.2:+11422783 | MS.gene20038:CDS |
| TGAAGAAGATTGGAGTGTTG+TGG | 0.655720 | 7.2:+11422968 | MS.gene20038:CDS |
| GAAGACAAAAGTTCAAGAGG+AGG | 0.660033 | 7.2:+11421481 | MS.gene20038:CDS |
| GGATAAAAGTAACAGAAGAG+TGG | 0.662477 | 7.2:+11422675 | MS.gene20038:CDS |
| TGCCGAGATAAGATACCAAG+AGG | 0.662730 | 7.2:+11422183 | MS.gene20038:CDS |
| GTGCTCCAGAAATGTCCCAA+AGG | 0.664123 | 7.2:+11420511 | MS.gene20038:CDS |
| TGAGTCCGTTGAAACAGCAA+GGG | 0.668117 | 7.2:+11422603 | MS.gene20038:CDS |
| GTCCGAAAGTAAACGAACGC+AGG | 0.685794 | 7.2:+11420646 | MS.gene20038:CDS |
| GGAAACAGTAAATAAGACAG+TGG | 0.686379 | 7.2:+11421928 | MS.gene20038:CDS |
| AGATTTGGCAGAGATAAGCG+CGG | 0.695807 | 7.2:-11422128 | None:intergenic |
| TGGATACTGATGTTGCAGAG+TGG | 0.711923 | 7.2:+11422467 | MS.gene20038:CDS |
| GAGAGAGGCTGAATTATACG+AGG | 0.729149 | 7.2:+11422279 | MS.gene20038:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTAATCAATTAAGTT+GGG | - | chr7.2:11420841-11420860 | None:intergenic | 10.0% |
| !!! | GATGAATATTAAAAATATTT+TGG | - | chr7.2:11421308-11421327 | None:intergenic | 10.0% |
| !! | ATTTGTTTATTTATGCTAAT+TGG | + | chr7.2:11420469-11420488 | MS.gene20038:intron | 15.0% |
| !! | CATAAATTAATCAATTAAGT+TGG | - | chr7.2:11420842-11420861 | None:intergenic | 15.0% |
| !!! | AGTTCGTAAATTTTTTTTTA+TGG | + | chr7.2:11421230-11421249 | MS.gene20038:intron | 15.0% |
| !!! | GATTAATTTATGAGTATTTT+TGG | + | chr7.2:11420850-11420869 | MS.gene20038:intron | 15.0% |
| !! | AAGAGATAATTATTATAACG+AGG | - | chr7.2:11420818-11420837 | None:intergenic | 20.0% |
| !! | ACTAAGAGAAGTTTATTTAA+AGG | - | chr7.2:11420200-11420219 | None:intergenic | 20.0% |
| !! | ACTTGTATAATGTATATGAA+TGG | + | chr7.2:11420338-11420357 | MS.gene20038:intron | 20.0% |
| !! | AGAGATAATTATTATAACGA+GGG | - | chr7.2:11420817-11420836 | None:intergenic | 20.0% |
| !! | AGTAAATGAAACAAAAACAT+TGG | - | chr7.2:11420292-11420311 | None:intergenic | 20.0% |
| !! | ATCTTGAATTCATGTAAAAA+CGG | + | chr7.2:11420771-11420790 | MS.gene20038:intron | 20.0% |
| !! | CAATTTATGTATTTCATTCA+TGG | - | chr7.2:11421708-11421727 | None:intergenic | 20.0% |
| !! | TGGAATAATAACATTAAATG+TGG | + | chr7.2:11420870-11420889 | MS.gene20038:intron | 20.0% |
| !! | TTATAATAATTGAGTTCAGA+GGG | - | chr7.2:11420711-11420730 | None:intergenic | 20.0% |
| !! | TTTGTTTCATTTACTTAAGT+TGG | + | chr7.2:11420297-11420316 | MS.gene20038:intron | 20.0% |
| !!! | ATGTTTTTGTTTTTCTTCTT+TGG | - | chr7.2:11422946-11422965 | None:intergenic | 20.0% |
| ! | AACTTTCAATCTCCTTAATT+CGG | - | chr7.2:11422755-11422774 | None:intergenic | 25.0% |
| ! | AGTATCTATCAATATCATCA+AGG | - | chr7.2:11421177-11421196 | None:intergenic | 25.0% |
| ! | CTTATAATAATTGAGTTCAG+AGG | - | chr7.2:11420712-11420731 | None:intergenic | 25.0% |
| ! | GAGATAATTATTATAACGAG+GGG | - | chr7.2:11420816-11420835 | None:intergenic | 25.0% |
| ! | GATAGATACTTATTGTTTAG+TGG | + | chr7.2:11421187-11421206 | MS.gene20038:intron | 25.0% |
| ! | TATGGAAAAACTAAGAAATG+AGG | + | chr7.2:11421841-11421860 | MS.gene20038:CDS | 25.0% |
| ! | TATTTGAGTCCAACAAATTT+AGG | + | chr7.2:11421079-11421098 | MS.gene20038:intron | 25.0% |
| ! | TGAAATTGAAAAGTTAACTG+TGG | + | chr7.2:11420072-11420091 | MS.gene20038:intron | 25.0% |
| ! | TGTCAAAACAAATTTGTGAA+GGG | + | chr7.2:11420142-11420161 | MS.gene20038:intron | 25.0% |
| ! | TTGTCAAAACAAATTTGTGA+AGG | + | chr7.2:11420141-11420160 | MS.gene20038:intron | 25.0% |
| !! | AAACTTCTCTTAGTTCTTAT+TGG | + | chr7.2:11420206-11420225 | MS.gene20038:intron | 25.0% |
| !! | AACTTCTCTTAGTTCTTATT+GGG | + | chr7.2:11420207-11420226 | MS.gene20038:intron | 25.0% |
| !! | TATTTATGCTAATTGGCTTA+TGG | + | chr7.2:11420476-11420495 | MS.gene20038:intron | 25.0% |
| !! | TCTTTTGGTATCTTTCTTAT+GGG | - | chr7.2:11420621-11420640 | None:intergenic | 25.0% |
| !! | TTATAATGTGTCTCTTTTTC+TGG | + | chr7.2:11421351-11421370 | MS.gene20038:intron | 25.0% |
| !!! | TTCAGTTACTTTTTTCAACT+CGG | - | chr7.2:11422518-11422537 | None:intergenic | 25.0% |
| AAAAACATGCTGAAGAAGAT+TGG | + | chr7.2:11422958-11422977 | MS.gene20038:CDS | 30.0% | |
| AAAATCTCAAGCAAAATCCT+TGG | + | chr7.2:11422021-11422040 | MS.gene20038:CDS | 30.0% | |
| AGAACTCAGTAAAATATCTC+AGG | + | chr7.2:11421604-11421623 | MS.gene20038:CDS | 30.0% | |
| AGGAAAATGAGGAGATAAAT+GGG | + | chr7.2:11422098-11422117 | MS.gene20038:CDS | 30.0% | |
| GAAACAATGGAAAATGTGTA+GGG | + | chr7.2:11422833-11422852 | MS.gene20038:CDS | 30.0% | |
| GACAAAACTTAGCTATGTAA+TGG | + | chr7.2:11422645-11422664 | MS.gene20038:CDS | 30.0% | |
| GCAGAATAAAATCATTGAAG+AGG | + | chr7.2:11422576-11422595 | MS.gene20038:CDS | 30.0% | |
| GTTTCAAATACCTCAGATAT+TGG | - | chr7.2:11420684-11420703 | None:intergenic | 30.0% | |
| TAAGGATCAACTTAACTCAT+CGG | + | chr7.2:11421451-11421470 | MS.gene20038:CDS | 30.0% | |
| TCATCTGTGTCTTCTAAATA+AGG | - | chr7.2:11422916-11422935 | None:intergenic | 30.0% | |
| ! | CTTTTGCTAATAATGTGGAT+GGG | + | chr7.2:11421106-11421125 | MS.gene20038:intron | 30.0% |
| ! | CTTTTGGTATCTTTCTTATG+GGG | - | chr7.2:11420620-11420639 | None:intergenic | 30.0% |
| ! | GTCTTTTGGTATCTTTCTTA+TGG | - | chr7.2:11420622-11420641 | None:intergenic | 30.0% |
| ! | TACAATCTTTACCTTGCTTT+TGG | - | chr7.2:11419914-11419933 | None:intergenic | 30.0% |
| ! | TACACATTTTCCATTGTTTC+CGG | - | chr7.2:11422833-11422852 | None:intergenic | 30.0% |
| ! | TCTTTTGCTAATAATGTGGA+TGG | + | chr7.2:11421105-11421124 | MS.gene20038:intron | 30.0% |
| !! | AAAAGAGTGCCTAAATTTGT+TGG | - | chr7.2:11421091-11421110 | None:intergenic | 30.0% |
| ACTTGACATTTAACCCACTT+GGG | + | chr7.2:11420900-11420919 | MS.gene20038:intron | 35.0% | |
| AGAAAACAGTATCCTCAAGA+TGG | + | chr7.2:11422537-11422556 | MS.gene20038:CDS | 35.0% | |
| AGTTAGGAGAATCAATCATC+CGG | - | chr7.2:11420405-11420424 | None:intergenic | 35.0% | |
| ATCTCAATTGCTGAGTTTGT+CGG | + | chr7.2:11422360-11422379 | MS.gene20038:CDS | 35.0% | |
| ATGGAAGACAAAAGTTCAAG+AGG | + | chr7.2:11421478-11421497 | MS.gene20038:CDS | 35.0% | |
| CAGGAAAATGAGGAGATAAA+TGG | + | chr7.2:11422097-11422116 | MS.gene20038:CDS | 35.0% | |
| CTGAATTATACGAGGAATTG+AGG | + | chr7.2:11422287-11422306 | MS.gene20038:CDS | 35.0% | |
| GGAAAATGTGTAGGGAAAAA+CGG | + | chr7.2:11422841-11422860 | MS.gene20038:CDS | 35.0% | |
| GGAAACAATGGAAAATGTGT+AGG | + | chr7.2:11422832-11422851 | MS.gene20038:CDS | 35.0% | |
| GGAAACAGTAAATAAGACAG+TGG | + | chr7.2:11421928-11421947 | MS.gene20038:CDS | 35.0% | |
| GGATAAAAGTAACAGAAGAG+TGG | + | chr7.2:11422675-11422694 | MS.gene20038:CDS | 35.0% | |
| TACTTGACATTTAACCCACT+TGG | + | chr7.2:11420899-11420918 | MS.gene20038:intron | 35.0% | |
| TAGTGAAGCTATCTCTGTTA+TGG | + | chr7.2:11421823-11421842 | MS.gene20038:CDS | 35.0% | |
| TATATGAATGGCGCTGTAAA+CGG | + | chr7.2:11420350-11420369 | MS.gene20038:intron | 35.0% | |
| TATCCTCAAGATGGAGATAA+AGG | + | chr7.2:11422546-11422565 | MS.gene20038:CDS | 35.0% | |
| TGCTGCAGAACTCAAAAAAA+TGG | + | chr7.2:11422447-11422466 | MS.gene20038:CDS | 35.0% | |
| TGGCAAAATGCAAATGCAAT+TGG | + | chr7.2:11421907-11421926 | MS.gene20038:CDS | 35.0% | |
| TGTAGCAAGTGATTTCCTTT+GGG | - | chr7.2:11420529-11420548 | None:intergenic | 35.0% | |
| TTCCTCTTGGTATCTTATCT+CGG | - | chr7.2:11422188-11422207 | None:intergenic | 35.0% | |
| TTGATCACTTCAGTGTGTTA+TGG | + | chr7.2:11420424-11420443 | MS.gene20038:intron | 35.0% | |
| TTGTAGCAAGTGATTTCCTT+TGG | - | chr7.2:11420530-11420549 | None:intergenic | 35.0% | |
| ! | ACTGATTCAACCAATGGAAA+GGG | + | chr7.2:11422067-11422086 | MS.gene20038:CDS | 35.0% |
| ! | ATTGAGATTCCTTTTCCATC+AGG | - | chr7.2:11422348-11422367 | None:intergenic | 35.0% |
| ! | GCACTCTTTTGCTAATAATG+TGG | + | chr7.2:11421101-11421120 | MS.gene20038:intron | 35.0% |
| ! | GTTGTTAGCCTGAGAAAATT+CGG | - | chr7.2:11421759-11421778 | None:intergenic | 35.0% |
| ! | TAGCTATGTAATGGAAGAAG+CGG | + | chr7.2:11422654-11422673 | MS.gene20038:CDS | 35.0% |
| ! | TATTATAACGAGGGGCATAT+TGG | - | chr7.2:11420808-11420827 | None:intergenic | 35.0% |
| !! | TACTTCTAAAGCTCGTGATT+CGG | - | chr7.2:11421885-11421904 | None:intergenic | 35.0% |
| !! | TCACGAGCTTTAGAAGTAAT+TGG | + | chr7.2:11421887-11421906 | MS.gene20038:CDS | 35.0% |
| !! | TTGCTTTTATACCATCCGAT+CGG | - | chr7.2:11421961-11421980 | None:intergenic | 35.0% |
| !!! | AATCCATTGAGTGTTGCTTT+TGG | - | chr7.2:11421667-11421686 | None:intergenic | 35.0% |
| !!! | TGCTGATTTTAGTCATGAGA+TGG | - | chr7.2:11419981-11420000 | None:intergenic | 35.0% |
| !!! | TTTTCTGGCTTTAGAAGAAG+CGG | + | chr7.2:11421366-11421385 | MS.gene20038:intron | 35.0% |
| AAAAGCAAGCCTGATGGAAA+AGG | + | chr7.2:11422336-11422355 | MS.gene20038:CDS | 40.0% | |
| AAAGGTCCGAAAACTGTTGA+CGG | - | chr7.2:11421559-11421578 | None:intergenic | 40.0% | |
| AACCTGCGTTCGTTTACTTT+CGG | - | chr7.2:11420651-11420670 | None:intergenic | 40.0% | |
| AACTTAACTCATCGGAGTCA+TGG | + | chr7.2:11421459-11421478 | MS.gene20038:CDS | 40.0% | |
| ACGAAAAGCGATCTACTGAA+AGG | + | chr7.2:11422413-11422432 | MS.gene20038:CDS | 40.0% | |
| ACTAAATAGCCCACCCAAAT+TGG | - | chr7.2:11421000-11421019 | None:intergenic | 40.0% | |
| ACTCCTTTATCTCCATCTTG+AGG | - | chr7.2:11422552-11422571 | None:intergenic | 40.0% | |
| AGAGCAGTTGAAATCTGCAT+TGG | + | chr7.2:11422156-11422175 | MS.gene20038:CDS | 40.0% | |
| ATCACACAGTCCAATATCTG+AGG | + | chr7.2:11420671-11420690 | MS.gene20038:CDS | 40.0% | |
| ATCTCAAGCAAAATCCTTGG+AGG | + | chr7.2:11422024-11422043 | MS.gene20038:CDS | 40.0% | |
| ATGAGATGGCACAAAGAGAA+TGG | - | chr7.2:11419967-11419986 | None:intergenic | 40.0% | |
| CAACTGCTCTACTTCAGATT+TGG | - | chr7.2:11422146-11422165 | None:intergenic | 40.0% | |
| CAAGATCAAGTATGCTTGTG+TGG | + | chr7.2:11420265-11420284 | MS.gene20038:intron | 40.0% | |
| CAAGATGGAGATAAAGGAGT+TGG | + | chr7.2:11422552-11422571 | MS.gene20038:CDS | 40.0% | |
| CACACAAGCATACTTGATCT+TGG | - | chr7.2:11420267-11420286 | None:intergenic | 40.0% | |
| CACACTGAAGTGATCAAGTT+AGG | - | chr7.2:11420421-11420440 | None:intergenic | 40.0% | |
| CACTTCAGTGTGTTATGGTT+TGG | + | chr7.2:11420429-11420448 | MS.gene20038:intron | 40.0% | |
| CGAAAAGCGATCTACTGAAA+GGG | + | chr7.2:11422414-11422433 | MS.gene20038:CDS | 40.0% | |
| GAAGACAAAAGTTCAAGAGG+AGG | + | chr7.2:11421481-11421500 | MS.gene20038:CDS | 40.0% | |
| GAATTGAGGAAAGCTATAGC+TGG | + | chr7.2:11422301-11422320 | MS.gene20038:CDS | 40.0% | |
| GCATCTATACTTTCTACCAC+CGG | + | chr7.2:11422811-11422830 | MS.gene20038:CDS | 40.0% | |
| GGTATCTTTCTTATGGGGTT+TGG | - | chr7.2:11420615-11420634 | None:intergenic | 40.0% | |
| TGAAAGTTCAGTCTGATCAG+TGG | + | chr7.2:11422767-11422786 | MS.gene20038:CDS | 40.0% | |
| TGTCCAAAAGCAACACTCAA+TGG | + | chr7.2:11421661-11421680 | MS.gene20038:CDS | 40.0% | |
| TTCTAATCTGCAATGTGCTC+TGG | - | chr7.2:11422216-11422235 | None:intergenic | 40.0% | |
| TTCTTGAAGTCGTGCTTCTT+CGG | - | chr7.2:11421588-11421607 | None:intergenic | 40.0% | |
| TTGCTCCAACTCAAAAGCTA+AGG | - | chr7.2:11421999-11422018 | None:intergenic | 40.0% | |
| ! | ACATTTTCCATTGTTTCCGG+TGG | - | chr7.2:11422830-11422849 | None:intergenic | 40.0% |
| ! | ACTTTCGGACTCATGTCTTT+TGG | - | chr7.2:11420636-11420655 | None:intergenic | 40.0% |
| ! | AGAATCCCGTCAACAGTTTT+CGG | + | chr7.2:11421550-11421569 | MS.gene20038:CDS | 40.0% |
| ! | ATTCTTCCAGCTCTTTTGAC+AGG | - | chr7.2:11421535-11421554 | None:intergenic | 40.0% |
| ! | GGTTAGTTAGACTTGCCTTA+TGG | + | chr7.2:11421127-11421146 | MS.gene20038:intron | 40.0% |
| ! | TATGCTAATTGGCTTATGGC+TGG | + | chr7.2:11420480-11420499 | MS.gene20038:intron | 40.0% |
| ! | TTCTTCCAGCTCTTTTGACA+GGG | - | chr7.2:11421534-11421553 | None:intergenic | 40.0% |
| !! | ACCAAACTCTGGTTCTAACT+CGG | + | chr7.2:11420578-11420597 | MS.gene20038:CDS | 40.0% |
| !! | AGAAGATCTGAAGAGTGCTA+AGG | + | chr7.2:11421433-11421452 | MS.gene20038:CDS | 40.0% |
| !! | AGATCGCTTTTCGTTGATAC+TGG | - | chr7.2:11422407-11422426 | None:intergenic | 40.0% |
| !! | CAAGTCCTTAGCTTTTGAGT+TGG | + | chr7.2:11421991-11422010 | MS.gene20038:CDS | 40.0% |
| !! | CACTGATTCAACCAATGGAA+AGG | + | chr7.2:11422066-11422085 | MS.gene20038:CDS | 40.0% |
| !! | CTTGACACTGATTCAACCAA+TGG | + | chr7.2:11422061-11422080 | MS.gene20038:CDS | 40.0% |
| !! | GATTTCCTTTGGGACATTTC+TGG | - | chr7.2:11420519-11420538 | None:intergenic | 40.0% |
| !! | TAGAAGTGCTTACGAACAAC+TGG | + | chr7.2:11422231-11422250 | MS.gene20038:CDS | 40.0% |
| !! | TGAAGAAGATTGGAGTGTTG+TGG | + | chr7.2:11422968-11422987 | MS.gene20038:CDS | 40.0% |
| AAGGTCCGAAAACTGTTGAC+GGG | - | chr7.2:11421558-11421577 | None:intergenic | 45.0% | |
| AATCCTTGGAGGAACTTGTG+AGG | + | chr7.2:11422035-11422054 | MS.gene20038:CDS | 45.0% | |
| AGAGCTAAAAGCAAGCCTGA+TGG | + | chr7.2:11422330-11422349 | MS.gene20038:CDS | 45.0% | |
| AGATTTGGCAGAGATAAGCG+CGG | - | chr7.2:11422131-11422150 | None:intergenic | 45.0% | |
| ATCAGAATCCAGTGAGAGAG+AGG | + | chr7.2:11422264-11422283 | MS.gene20038:CDS | 45.0% | |
| ATGCTCAGATTCAGGACTTG+AGG | + | chr7.2:11421792-11421811 | MS.gene20038:CDS | 45.0% | |
| CAATGGAAAGGGACTTTCTC+AGG | + | chr7.2:11422078-11422097 | MS.gene20038:CDS | 45.0% | |
| CAGAGTTGGAAGCCGAATTA+AGG | + | chr7.2:11422740-11422759 | MS.gene20038:CDS | 45.0% | |
| CAGTTGAAGACACCAAACTC+TGG | + | chr7.2:11420567-11420586 | MS.gene20038:CDS | 45.0% | |
| CTGAGAAAGTCCCTTTCCAT+TGG | - | chr7.2:11422080-11422099 | None:intergenic | 45.0% | |
| CTTTCTACCACCGGAAACAA+TGG | + | chr7.2:11422820-11422839 | MS.gene20038:CDS | 45.0% | |
| GACATTTAACCCACTTGGGT+TGG | + | chr7.2:11420904-11420923 | MS.gene20038:intron | 45.0% | |
| GAGAGAGGCTGAATTATACG+AGG | + | chr7.2:11422279-11422298 | MS.gene20038:CDS | 45.0% | |
| GGGACTTTCTCAGGAAAATG+AGG | + | chr7.2:11422087-11422106 | MS.gene20038:CDS | 45.0% | |
| GTCTGATCATGCTCAGATTC+AGG | + | chr7.2:11421784-11421803 | MS.gene20038:CDS | 45.0% | |
| TAATTCAGCCTCTCTCTCAC+TGG | - | chr7.2:11422275-11422294 | None:intergenic | 45.0% | |
| TAGCGTTGCATAACTTCCTC+CGG | + | chr7.2:11420383-11420402 | MS.gene20038:intron | 45.0% | |
| TAGGAGAATCAATCATCCGG+AGG | - | chr7.2:11420402-11420421 | None:intergenic | 45.0% | |
| TCAATTGCTGAGTTTGTCGG+CGG | + | chr7.2:11422363-11422382 | MS.gene20038:CDS | 45.0% | |
| TCAGATTCAGGACTTGAGGA+TGG | + | chr7.2:11421796-11421815 | MS.gene20038:CDS | 45.0% | |
| TCAGGCTGCAAATTCAGAGT+TGG | + | chr7.2:11422726-11422745 | MS.gene20038:CDS | 45.0% | |
| TCCAATTCCTGAACCTTGCT+AGG | - | chr7.2:11421392-11421411 | None:intergenic | 45.0% | |
| TGAGTCCGTTGAAACAGCAA+GGG | + | chr7.2:11422603-11422622 | MS.gene20038:CDS | 45.0% | |
| TGATCAGTGGAGAAAAGCAG+CGG | + | chr7.2:11422780-11422799 | MS.gene20038:CDS | 45.0% | |
| TGCATGGCAATCTGAACTTG+AGG | + | chr7.2:11421637-11421656 | MS.gene20038:CDS | 45.0% | |
| TGCCGAGATAAGATACCAAG+AGG | + | chr7.2:11422183-11422202 | MS.gene20038:CDS | 45.0% | |
| TGGATACTGATGTTGCAGAG+TGG | + | chr7.2:11422467-11422486 | MS.gene20038:CDS | 45.0% | |
| TTGAGTCCGTTGAAACAGCA+AGG | + | chr7.2:11422602-11422621 | MS.gene20038:CDS | 45.0% | |
| TTTCCTCACAAGTTCCTCCA+AGG | - | chr7.2:11422041-11422060 | None:intergenic | 45.0% | |
| ! | AAGCGAGTCCGAATTTTCTC+AGG | + | chr7.2:11421748-11421767 | MS.gene20038:CDS | 45.0% |
| ! | ATTCTCTCCGGTGCCAATTT+GGG | + | chr7.2:11420984-11421003 | MS.gene20038:intron | 45.0% |
| ! | CTCAATGGATTCATCTGCTC+TGG | + | chr7.2:11421676-11421695 | MS.gene20038:CDS | 45.0% |
| ! | TGCTCTGGATGTATTCCTCT+TGG | - | chr7.2:11422201-11422220 | None:intergenic | 45.0% |
| !! | AGAAGATTGGAGTGTTGTGG+AGG | + | chr7.2:11422971-11422990 | MS.gene20038:CDS | 45.0% |
| !! | CAGAGTTTGGTGTCTTCAAC+TGG | - | chr7.2:11420569-11420588 | None:intergenic | 45.0% |
| !! | CTTTCTTATGGGGTTTGGTG+AGG | - | chr7.2:11420610-11420629 | None:intergenic | 45.0% |
| AAGTCGTGCTTCTTCGGAAG+CGG | - | chr7.2:11421582-11421601 | None:intergenic | 50.0% | |
| ACTGTCCCTGTCAAAAGAGC+TGG | + | chr7.2:11421526-11421545 | MS.gene20038:CDS | 50.0% | |
| AGTTTGTCGGCGGAGAATGA+GGG | + | chr7.2:11422373-11422392 | MS.gene20038:CDS | 50.0% | |
| CTGAGCAGCATCTAGCTGTT+CGG | - | chr7.2:11422710-11422729 | None:intergenic | 50.0% | |
| CTTGCCTTATGGAGCTATCG+CGG | + | chr7.2:11421138-11421157 | MS.gene20038:intron | 50.0% | |
| GAATCGAACCTGAGACCTTG+CGG | - | chr7.2:11420968-11420987 | None:intergenic | 50.0% | |
| GCCGAGTTAGAACCAGAGTT+TGG | - | chr7.2:11420582-11420601 | None:intergenic | 50.0% | |
| GCCTAGCAAGGTTCAGGAAT+TGG | + | chr7.2:11421388-11421407 | MS.gene20038:CDS | 50.0% | |
| GTCCGAAAGTAAACGAACGC+AGG | + | chr7.2:11420646-11420665 | MS.gene20038:CDS | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr7.2:11420972-11420991 | MS.gene20038:intron | 50.0% | |
| GTGCTCCAGAAATGTCCCAA+AGG | + | chr7.2:11420511-11420530 | MS.gene20038:CDS | 50.0% | |
| TTAGAAGAAGCGGCCTAGCA+AGG | + | chr7.2:11421376-11421395 | MS.gene20038:intron | 50.0% | |
| TTAGCCGCGATAGCTCCATA+AGG | - | chr7.2:11421145-11421164 | None:intergenic | 50.0% | |
| ! | GATTCTCTCCGGTGCCAATT+TGG | + | chr7.2:11420983-11421002 | MS.gene20038:intron | 50.0% |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | + | chr7.2:11420931-11420950 | MS.gene20038:intron | 50.0% |
| !! | TCTTATGGGGTTTGGTGAGG+AGG | - | chr7.2:11420607-11420626 | None:intergenic | 50.0% |
| !! | TGCAGCCCTTGCTGTTTCAA+CGG | - | chr7.2:11422611-11422630 | None:intergenic | 50.0% |
| !! | TTGGGACATTTCTGGAGCAC+TGG | - | chr7.2:11420511-11420530 | None:intergenic | 50.0% |
| AGACCCAAGCCAATACCACC+AGG | - | chr7.2:11420930-11420949 | None:intergenic | 55.0% | |
| CGAACAGCTAGATGCTGCTC+AGG | + | chr7.2:11422708-11422727 | MS.gene20038:CDS | 55.0% | |
| CTCAGGATCGAGATCGTGCA+TGG | + | chr7.2:11421621-11421640 | MS.gene20038:CDS | 55.0% | |
| GACAGTGGAGACACTCCGAT+CGG | + | chr7.2:11421943-11421962 | MS.gene20038:CDS | 55.0% | |
| GAGTTTGTCGGCGGAGAATG+AGG | + | chr7.2:11422372-11422391 | MS.gene20038:CDS | 55.0% | |
| GTGCTTCTTCGGAAGCGGAA+AGG | - | chr7.2:11421577-11421596 | None:intergenic | 55.0% | |
| GTTTGTCGGCGGAGAATGAG+GGG | + | chr7.2:11422374-11422393 | MS.gene20038:CDS | 55.0% | |
| TAGCCCACCCAAATTGGCAC+CGG | - | chr7.2:11420994-11421013 | None:intergenic | 55.0% | |
| TCAGTGGAGAAAAGCAGCGG+AGG | + | chr7.2:11422783-11422802 | MS.gene20038:CDS | 55.0% | |
| TTCAACTGGCGAGCAGTTCG+AGG | - | chr7.2:11420555-11420574 | None:intergenic | 55.0% | |
| ! | TCTCCGGTGCCAATTTGGGT+GGG | + | chr7.2:11420988-11421007 | MS.gene20038:intron | 55.0% |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | + | chr7.2:11420930-11420949 | MS.gene20038:intron | 55.0% |
| !! | TATGGGGTTTGGTGAGGAGG+AGG | - | chr7.2:11420604-11420623 | None:intergenic | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr7.2:11420924-11420943 | MS.gene20038:intron | 55.0% |
| !! | TTAACCCACTTGGGTTGGCC+TGG | + | chr7.2:11420909-11420928 | MS.gene20038:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr7.2:11420923-11420942 | MS.gene20038:intron | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | + | chr7.2:11420918-11420937 | MS.gene20038:intron | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr7.2:11420916-11420935 | None:intergenic | 60.0% | |
| GAAGCGGCCTAGCAAGGTTC+AGG | + | chr7.2:11421382-11421401 | MS.gene20038:CDS | 60.0% | |
| GTGGAGACACTCCGATCGGA+TGG | + | chr7.2:11421947-11421966 | MS.gene20038:CDS | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | - | chr7.2:11420917-11420936 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | - | chr7.2:11420965-11420984 | None:intergenic | 60.0% | |
| ! | CTCTCCGGTGCCAATTTGGG+TGG | + | chr7.2:11420987-11421006 | MS.gene20038:intron | 60.0% |
| GTGCTCCTCCGCAAGGTCTC+AGG | + | chr7.2:11420957-11420976 | MS.gene20038:intron | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | + | chr7.2:11420950-11420969 | MS.gene20038:intron | 65.0% |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr7.2:11420912-11420931 | MS.gene20038:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 11419902 | 11423008 | 11419902 | ID=MS.gene20038 |
| chr7.2 | mRNA | 11419902 | 11423008 | 11419902 | ID=MS.gene20038.t1;Parent=MS.gene20038 |
| chr7.2 | exon | 11419902 | 11419921 | 11419902 | ID=MS.gene20038.t1.exon1;Parent=MS.gene20038.t1 |
| chr7.2 | CDS | 11419902 | 11419921 | 11419902 | ID=cds.MS.gene20038.t1;Parent=MS.gene20038.t1 |
| chr7.2 | exon | 11420506 | 11420692 | 11420506 | ID=MS.gene20038.t1.exon2;Parent=MS.gene20038.t1 |
| chr7.2 | CDS | 11420506 | 11420692 | 11420506 | ID=cds.MS.gene20038.t1;Parent=MS.gene20038.t1 |
| chr7.2 | exon | 11421380 | 11423008 | 11421380 | ID=MS.gene20038.t1.exon3;Parent=MS.gene20038.t1 |
| chr7.2 | CDS | 11421380 | 11423008 | 11421380 | ID=cds.MS.gene20038.t1;Parent=MS.gene20038.t1 |
| Gene Sequence |
| Protein sequence |
