Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20652.t1 | XP_013450846.1 | 90.4 | 366 | 34 | 1 | 1 | 365 | 1 | 366 | 2.50E-170 | 608.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20652.t1 | Q94JU2 | 46.4 | 366 | 175 | 9 | 1 | 351 | 1 | 360 | 6.3e-74 | 279.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20652.t1 | A0A072U6B8 | 90.4 | 366 | 34 | 1 | 1 | 365 | 1 | 366 | 1.8e-170 | 608.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049297 | MS.gene20652 | 0.804452 | 2.15E-49 | -1.69E-46 |
MS.gene04933 | MS.gene20652 | 0.81656 | 5.19E-52 | -1.69E-46 |
MS.gene050227 | MS.gene20652 | 0.808743 | 2.67E-50 | -1.69E-46 |
MS.gene050228 | MS.gene20652 | 0.808794 | 2.60E-50 | -1.69E-46 |
MS.gene050558 | MS.gene20652 | 0.824148 | 9.44E-54 | -1.69E-46 |
MS.gene050560 | MS.gene20652 | 0.809964 | 1.46E-50 | -1.69E-46 |
MS.gene050787 | MS.gene20652 | 0.831513 | 1.60E-55 | -1.69E-46 |
MS.gene051265 | MS.gene20652 | 0.821991 | 3.01E-53 | -1.69E-46 |
MS.gene053836 | MS.gene20652 | 0.814941 | 1.19E-51 | -1.69E-46 |
MS.gene054183 | MS.gene20652 | 0.804785 | 1.83E-49 | -1.69E-46 |
MS.gene054473 | MS.gene20652 | 0.812294 | 4.56E-51 | -1.69E-46 |
MS.gene054942 | MS.gene20652 | 0.814261 | 1.69E-51 | -1.69E-46 |
MS.gene055356 | MS.gene20652 | 0.850806 | 1.34E-60 | -1.69E-46 |
MS.gene055357 | MS.gene20652 | 0.821967 | 3.05E-53 | -1.69E-46 |
MS.gene055358 | MS.gene20652 | 0.845515 | 3.87E-59 | -1.69E-46 |
MS.gene057469 | MS.gene20652 | 0.816048 | 6.76E-52 | -1.69E-46 |
MS.gene058378 | MS.gene20652 | 0.804097 | 2.54E-49 | -1.69E-46 |
MS.gene05886 | MS.gene20652 | 0.825476 | 4.59E-54 | -1.69E-46 |
MS.gene059128 | MS.gene20652 | 0.81692 | 4.31E-52 | -1.69E-46 |
MS.gene061114 | MS.gene20652 | -0.821656 | 3.60E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20652.t1 | MTR_6g007750 | 90.437 | 366 | 34 | 1 | 1 | 365 | 1 | 366 | 0.0 | 634 |
MS.gene20652.t1 | MTR_6g007747 | 80.000 | 365 | 69 | 1 | 1 | 365 | 1 | 361 | 0.0 | 564 |
MS.gene20652.t1 | MTR_6g007743 | 78.512 | 363 | 76 | 1 | 1 | 363 | 1 | 361 | 0.0 | 562 |
MS.gene20652.t1 | MTR_6g007757 | 81.694 | 366 | 65 | 2 | 1 | 365 | 1 | 365 | 0.0 | 558 |
MS.gene20652.t1 | MTR_6g007753 | 84.356 | 326 | 51 | 0 | 40 | 365 | 322 | 647 | 0.0 | 546 |
MS.gene20652.t1 | MTR_6g007753 | 69.041 | 365 | 71 | 2 | 1 | 365 | 1 | 323 | 3.13e-166 | 479 |
MS.gene20652.t1 | MTR_6g007740 | 76.099 | 364 | 85 | 1 | 1 | 364 | 1 | 362 | 0.0 | 530 |
MS.gene20652.t1 | MTR_6g007757 | 83.658 | 257 | 41 | 1 | 1 | 257 | 1 | 256 | 2.08e-147 | 417 |
MS.gene20652.t1 | MTR_0103s0090 | 53.388 | 369 | 163 | 4 | 1 | 365 | 1 | 364 | 1.34e-128 | 373 |
MS.gene20652.t1 | MTR_6g007760 | 55.911 | 313 | 130 | 4 | 1 | 309 | 1 | 309 | 1.37e-111 | 328 |
MS.gene20652.t1 | MTR_0103s0090 | 53.455 | 275 | 122 | 2 | 95 | 365 | 1 | 273 | 1.56e-97 | 291 |
MS.gene20652.t1 | MTR_1g014510 | 43.059 | 353 | 193 | 3 | 8 | 353 | 7 | 358 | 9.25e-88 | 272 |
MS.gene20652.t1 | MTR_4g106720 | 41.193 | 352 | 197 | 5 | 7 | 352 | 6 | 353 | 4.11e-81 | 252 |
MS.gene20652.t1 | MTR_5g034980 | 42.006 | 319 | 176 | 3 | 17 | 330 | 12 | 326 | 9.00e-77 | 240 |
MS.gene20652.t1 | MTR_5g034990 | 40.870 | 345 | 197 | 4 | 10 | 352 | 12 | 351 | 4.53e-75 | 236 |
MS.gene20652.t1 | MTR_3g090550 | 40.688 | 349 | 191 | 7 | 12 | 355 | 6 | 343 | 8.64e-75 | 235 |
MS.gene20652.t1 | MTR_5g034930 | 38.793 | 348 | 198 | 3 | 16 | 360 | 10 | 345 | 3.26e-69 | 221 |
MS.gene20652.t1 | MTR_5g034910 | 39.117 | 317 | 188 | 2 | 17 | 330 | 12 | 326 | 1.20e-66 | 214 |
MS.gene20652.t1 | MTR_5g034970 | 40.125 | 319 | 169 | 4 | 17 | 330 | 12 | 313 | 2.53e-60 | 197 |
MS.gene20652.t1 | MTR_3g095460 | 34.320 | 338 | 212 | 3 | 13 | 343 | 6 | 340 | 1.45e-54 | 183 |
MS.gene20652.t1 | MTR_3g072560 | 32.931 | 331 | 213 | 6 | 8 | 334 | 14 | 339 | 6.21e-50 | 172 |
MS.gene20652.t1 | MTR_5g034980 | 39.837 | 246 | 139 | 3 | 17 | 257 | 12 | 253 | 2.22e-48 | 166 |
MS.gene20652.t1 | MTR_2g007990 | 32.588 | 313 | 199 | 6 | 30 | 334 | 33 | 341 | 5.42e-47 | 164 |
MS.gene20652.t1 | MTR_8g041390 | 31.250 | 320 | 206 | 6 | 32 | 341 | 33 | 348 | 3.73e-46 | 162 |
MS.gene20652.t1 | MTR_1g030400 | 33.754 | 317 | 193 | 6 | 32 | 334 | 27 | 340 | 5.73e-46 | 161 |
MS.gene20652.t1 | MTR_1g068630 | 34.641 | 306 | 188 | 6 | 30 | 329 | 33 | 332 | 1.55e-45 | 160 |
MS.gene20652.t1 | MTR_4g094340 | 32.194 | 351 | 216 | 6 | 13 | 349 | 10 | 352 | 1.67e-45 | 159 |
MS.gene20652.t1 | MTR_6g036450 | 34.877 | 324 | 187 | 8 | 25 | 334 | 31 | 344 | 1.81e-45 | 159 |
MS.gene20652.t1 | MTR_4g094340 | 32.194 | 351 | 216 | 6 | 13 | 349 | 28 | 370 | 2.70e-45 | 159 |
MS.gene20652.t1 | MTR_6g081840 | 35.354 | 297 | 173 | 6 | 72 | 360 | 67 | 352 | 1.11e-44 | 157 |
MS.gene20652.t1 | MTR_1g030580 | 31.420 | 331 | 212 | 6 | 37 | 359 | 41 | 364 | 1.16e-44 | 158 |
MS.gene20652.t1 | MTR_4g094362 | 31.953 | 338 | 217 | 6 | 13 | 341 | 15 | 348 | 1.21e-44 | 158 |
MS.gene20652.t1 | MTR_2g007960 | 30.303 | 363 | 235 | 7 | 1 | 350 | 1 | 358 | 1.27e-44 | 158 |
MS.gene20652.t1 | MTR_2g027030 | 32.941 | 340 | 210 | 6 | 30 | 355 | 30 | 365 | 1.29e-44 | 157 |
MS.gene20652.t1 | MTR_3g012420 | 32.537 | 335 | 203 | 8 | 38 | 365 | 43 | 361 | 1.56e-44 | 158 |
MS.gene20652.t1 | MTR_8g092650 | 32.558 | 344 | 213 | 5 | 13 | 340 | 6 | 346 | 2.33e-44 | 156 |
MS.gene20652.t1 | MTR_3g072500 | 31.024 | 332 | 216 | 7 | 37 | 359 | 45 | 372 | 3.31e-44 | 157 |
MS.gene20652.t1 | MTR_2g007970 | 34.405 | 311 | 193 | 5 | 30 | 333 | 30 | 336 | 6.33e-44 | 156 |
MS.gene20652.t1 | MTR_3g072530 | 32.154 | 311 | 200 | 6 | 38 | 341 | 40 | 346 | 1.70e-43 | 154 |
MS.gene20652.t1 | MTR_7g111830 | 32.424 | 330 | 209 | 5 | 11 | 329 | 6 | 332 | 1.93e-43 | 155 |
MS.gene20652.t1 | MTR_1g074020 | 35.410 | 305 | 182 | 8 | 37 | 335 | 38 | 333 | 2.45e-43 | 154 |
MS.gene20652.t1 | MTR_0096s0100 | 29.022 | 317 | 216 | 5 | 37 | 349 | 43 | 354 | 2.55e-43 | 154 |
MS.gene20652.t1 | MTR_1g074120 | 33.642 | 324 | 200 | 8 | 32 | 348 | 36 | 351 | 3.19e-43 | 154 |
MS.gene20652.t1 | MTR_4g094360 | 31.421 | 366 | 222 | 6 | 10 | 356 | 12 | 367 | 4.35e-43 | 154 |
MS.gene20652.t1 | MTR_3g095450 | 29.909 | 331 | 221 | 4 | 13 | 334 | 6 | 334 | 3.27e-42 | 151 |
MS.gene20652.t1 | MTR_2g016710 | 29.395 | 347 | 228 | 8 | 13 | 350 | 9 | 347 | 3.34e-42 | 151 |
MS.gene20652.t1 | MTR_7g100050 | 31.699 | 306 | 199 | 6 | 30 | 329 | 31 | 332 | 1.49e-41 | 149 |
MS.gene20652.t1 | MTR_1g030600 | 32.226 | 301 | 194 | 5 | 37 | 330 | 43 | 340 | 3.71e-41 | 149 |
MS.gene20652.t1 | MTR_1g074160 | 35.484 | 310 | 184 | 9 | 32 | 333 | 33 | 334 | 3.80e-41 | 148 |
MS.gene20652.t1 | MTR_1g038560 | 29.706 | 340 | 221 | 7 | 13 | 345 | 4 | 332 | 4.44e-41 | 147 |
MS.gene20652.t1 | MTR_1g074070 | 33.657 | 309 | 192 | 7 | 32 | 335 | 36 | 336 | 5.01e-41 | 147 |
MS.gene20652.t1 | MTR_1g073990 | 34.783 | 299 | 186 | 5 | 37 | 330 | 41 | 335 | 5.82e-41 | 147 |
MS.gene20652.t1 | MTR_4g094342 | 29.907 | 321 | 213 | 4 | 13 | 324 | 14 | 331 | 6.21e-41 | 147 |
MS.gene20652.t1 | MTR_3g072500 | 32.342 | 269 | 175 | 4 | 98 | 359 | 1 | 269 | 6.67e-41 | 145 |
MS.gene20652.t1 | MTR_3g095420 | 28.097 | 331 | 227 | 4 | 13 | 334 | 8 | 336 | 7.57e-41 | 147 |
MS.gene20652.t1 | MTR_1g051120 | 34.259 | 324 | 200 | 8 | 14 | 330 | 19 | 336 | 1.01e-40 | 147 |
MS.gene20652.t1 | MTR_4g129650 | 31.335 | 367 | 226 | 9 | 12 | 360 | 8 | 366 | 3.22e-40 | 146 |
MS.gene20652.t1 | MTR_8g006010 | 32.738 | 336 | 214 | 6 | 6 | 335 | 7 | 336 | 4.20e-40 | 146 |
MS.gene20652.t1 | MTR_1g070175 | 31.529 | 314 | 203 | 6 | 30 | 340 | 34 | 338 | 5.65e-40 | 145 |
MS.gene20652.t1 | MTR_4g094340 | 33.803 | 284 | 167 | 5 | 83 | 349 | 7 | 286 | 6.06e-40 | 143 |
MS.gene20652.t1 | MTR_1g023180 | 29.683 | 347 | 217 | 6 | 32 | 355 | 41 | 383 | 1.27e-39 | 145 |
MS.gene20652.t1 | MTR_1g114210 | 29.755 | 326 | 202 | 8 | 30 | 337 | 29 | 345 | 3.26e-39 | 142 |
MS.gene20652.t1 | MTR_4g094352 | 29.600 | 375 | 239 | 9 | 13 | 364 | 13 | 385 | 3.39e-39 | 143 |
MS.gene20652.t1 | MTR_2g102340 | 31.494 | 308 | 196 | 5 | 30 | 329 | 30 | 330 | 9.01e-39 | 142 |
MS.gene20652.t1 | MTR_2g007260 | 30.836 | 347 | 223 | 8 | 30 | 364 | 32 | 373 | 6.71e-38 | 140 |
MS.gene20652.t1 | MTR_4g094360 | 32.268 | 313 | 186 | 4 | 62 | 356 | 16 | 320 | 1.25e-37 | 139 |
MS.gene20652.t1 | MTR_3g112480 | 28.406 | 345 | 213 | 7 | 32 | 352 | 40 | 374 | 4.62e-36 | 135 |
MS.gene20652.t1 | MTR_2g065550 | 31.325 | 332 | 221 | 5 | 6 | 332 | 3 | 332 | 8.59e-36 | 134 |
MS.gene20652.t1 | MTR_5g025290 | 27.632 | 380 | 241 | 11 | 5 | 357 | 25 | 397 | 2.68e-35 | 134 |
MS.gene20652.t1 | MTR_5g025290 | 27.671 | 365 | 231 | 10 | 20 | 357 | 11 | 369 | 4.44e-35 | 132 |
MS.gene20652.t1 | MTR_3g095440 | 29.283 | 321 | 210 | 6 | 25 | 334 | 20 | 334 | 4.86e-34 | 129 |
MS.gene20652.t1 | MTR_5g025400 | 28.947 | 380 | 223 | 11 | 18 | 357 | 4 | 376 | 8.35e-34 | 129 |
MS.gene20652.t1 | MTR_5g025330 | 28.302 | 318 | 205 | 6 | 32 | 330 | 29 | 342 | 3.05e-33 | 130 |
MS.gene20652.t1 | MTR_3g112480 | 29.787 | 282 | 169 | 4 | 72 | 330 | 22 | 297 | 3.50e-33 | 126 |
MS.gene20652.t1 | MTR_8g006120 | 32.219 | 329 | 215 | 5 | 12 | 334 | 10 | 336 | 6.12e-33 | 126 |
MS.gene20652.t1 | MTR_2g016710 | 28.571 | 301 | 202 | 7 | 13 | 307 | 9 | 302 | 2.06e-32 | 124 |
MS.gene20652.t1 | MTR_5g025370 | 27.887 | 355 | 226 | 8 | 32 | 365 | 30 | 375 | 3.85e-32 | 124 |
MS.gene20652.t1 | MTR_5g025340 | 27.451 | 357 | 227 | 8 | 25 | 354 | 15 | 366 | 5.99e-32 | 124 |
MS.gene20652.t1 | MTR_4g094360 | 30.128 | 312 | 194 | 5 | 10 | 307 | 12 | 313 | 1.90e-31 | 121 |
MS.gene20652.t1 | MTR_5g089390 | 32.319 | 263 | 167 | 5 | 73 | 329 | 70 | 327 | 2.32e-31 | 122 |
MS.gene20652.t1 | MTR_5g021160 | 28.859 | 298 | 203 | 4 | 38 | 329 | 33 | 327 | 1.11e-30 | 120 |
MS.gene20652.t1 | MTR_8g006090 | 31.781 | 365 | 211 | 11 | 12 | 354 | 11 | 359 | 1.61e-30 | 119 |
MS.gene20652.t1 | MTR_8g072350 | 26.727 | 333 | 213 | 8 | 25 | 330 | 14 | 342 | 1.77e-30 | 120 |
MS.gene20652.t1 | MTR_8g092650 | 30.453 | 243 | 154 | 3 | 113 | 340 | 26 | 268 | 2.32e-30 | 117 |
MS.gene20652.t1 | MTR_3g019050 | 32.218 | 239 | 158 | 3 | 95 | 329 | 99 | 337 | 5.78e-29 | 115 |
MS.gene20652.t1 | MTR_4g129650 | 31.061 | 264 | 163 | 5 | 111 | 360 | 1 | 259 | 3.56e-28 | 111 |
MS.gene20652.t1 | MTR_5g068790 | 28.383 | 303 | 203 | 5 | 36 | 329 | 42 | 339 | 6.94e-28 | 113 |
MS.gene20652.t1 | MTR_3g072520 | 28.037 | 321 | 220 | 6 | 34 | 346 | 31 | 348 | 7.91e-28 | 112 |
MS.gene20652.t1 | MTR_5g021160 | 30.380 | 237 | 160 | 2 | 98 | 329 | 8 | 244 | 9.61e-28 | 110 |
MS.gene20652.t1 | MTR_5g069040 | 26.888 | 331 | 226 | 6 | 36 | 353 | 42 | 369 | 1.20e-27 | 112 |
MS.gene20652.t1 | MTR_8g006050 | 30.537 | 298 | 183 | 7 | 43 | 333 | 25 | 305 | 9.02e-27 | 109 |
MS.gene20652.t1 | MTR_1g052205 | 32.143 | 224 | 131 | 6 | 118 | 330 | 2 | 215 | 3.24e-26 | 105 |
MS.gene20652.t1 | MTR_3g095440 | 29.752 | 242 | 153 | 6 | 25 | 255 | 20 | 255 | 7.98e-26 | 104 |
MS.gene20652.t1 | MTR_5g012650 | 30.421 | 309 | 190 | 10 | 55 | 349 | 51 | 348 | 1.29e-25 | 106 |
MS.gene20652.t1 | MTR_1g014790 | 43.333 | 120 | 63 | 1 | 92 | 206 | 41 | 160 | 1.35e-25 | 102 |
MS.gene20652.t1 | MTR_8g006090 | 31.559 | 263 | 145 | 9 | 113 | 354 | 31 | 279 | 1.61e-24 | 101 |
MS.gene20652.t1 | MTR_1g074160 | 34.914 | 232 | 135 | 9 | 32 | 255 | 33 | 256 | 2.70e-24 | 100 |
MS.gene20652.t1 | MTR_4g094340 | 29.344 | 259 | 164 | 5 | 13 | 260 | 10 | 260 | 6.64e-24 | 99.8 |
MS.gene20652.t1 | MTR_4g094340 | 29.344 | 259 | 164 | 5 | 13 | 260 | 28 | 278 | 1.64e-23 | 99.0 |
MS.gene20652.t1 | MTR_3g112480 | 29.004 | 231 | 136 | 3 | 122 | 330 | 1 | 225 | 3.98e-23 | 97.4 |
MS.gene20652.t1 | MTR_3g072500 | 29.787 | 235 | 154 | 6 | 37 | 264 | 45 | 275 | 7.51e-23 | 97.1 |
MS.gene20652.t1 | MTR_4g100840 | 27.920 | 351 | 231 | 9 | 10 | 349 | 12 | 351 | 6.62e-22 | 95.9 |
MS.gene20652.t1 | MTR_2g102340 | 28.448 | 232 | 151 | 5 | 30 | 253 | 56 | 280 | 1.79e-19 | 88.6 |
MS.gene20652.t1 | MTR_5g021160 | 28.972 | 214 | 143 | 4 | 38 | 245 | 33 | 243 | 2.18e-19 | 87.4 |
MS.gene20652.t1 | MTR_3g072530 | 29.412 | 255 | 135 | 9 | 38 | 251 | 40 | 290 | 2.32e-19 | 87.8 |
MS.gene20652.t1 | MTR_8g006090 | 29.618 | 314 | 187 | 9 | 12 | 307 | 11 | 308 | 2.67e-19 | 87.8 |
MS.gene20652.t1 | MTR_1g051120 | 33.990 | 203 | 122 | 8 | 14 | 210 | 19 | 215 | 1.66e-18 | 83.6 |
MS.gene20652.t1 | MTR_1g051120 | 33.766 | 154 | 95 | 4 | 14 | 165 | 19 | 167 | 3.88e-18 | 83.6 |
MS.gene20652.t1 | MTR_4g094340 | 31.343 | 201 | 119 | 5 | 13 | 202 | 28 | 220 | 2.65e-17 | 80.5 |
MS.gene20652.t1 | MTR_3g072500 | 35.938 | 128 | 76 | 3 | 37 | 162 | 45 | 168 | 2.77e-17 | 80.1 |
MS.gene20652.t1 | MTR_4g094342 | 28.643 | 199 | 130 | 4 | 13 | 202 | 14 | 209 | 1.86e-15 | 75.9 |
MS.gene20652.t1 | MTR_8g006090 | 30.242 | 248 | 147 | 5 | 12 | 245 | 11 | 246 | 7.76e-15 | 74.7 |
MS.gene20652.t1 | MTR_1g061900 | 86.111 | 36 | 5 | 0 | 145 | 180 | 50 | 85 | 3.15e-14 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20652.t1 | AT3G28050 | 45.946 | 370 | 179 | 9 | 1 | 355 | 1 | 364 | 3.47e-99 | 298 |
MS.gene20652.t1 | AT5G40240 | 42.350 | 366 | 186 | 7 | 5 | 359 | 11 | 362 | 6.98e-89 | 272 |
MS.gene20652.t1 | AT5G40240 | 42.350 | 366 | 186 | 7 | 5 | 359 | 11 | 362 | 6.98e-89 | 272 |
MS.gene20652.t1 | AT5G40240 | 42.350 | 366 | 186 | 7 | 5 | 359 | 25 | 376 | 1.37e-88 | 272 |
MS.gene20652.t1 | AT5G40230 | 41.713 | 362 | 195 | 5 | 2 | 355 | 9 | 362 | 6.54e-86 | 265 |
MS.gene20652.t1 | AT5G40210 | 41.590 | 327 | 174 | 4 | 29 | 354 | 29 | 339 | 6.96e-78 | 243 |
MS.gene20652.t1 | AT4G15540 | 39.888 | 356 | 197 | 5 | 2 | 355 | 5 | 345 | 1.11e-71 | 227 |
MS.gene20652.t1 | AT4G15540 | 39.888 | 356 | 197 | 5 | 2 | 355 | 5 | 345 | 1.11e-71 | 227 |
MS.gene20652.t1 | AT3G28100 | 40.413 | 339 | 190 | 5 | 17 | 349 | 18 | 350 | 3.63e-69 | 221 |
MS.gene20652.t1 | AT3G28080 | 40.290 | 345 | 194 | 5 | 17 | 355 | 18 | 356 | 4.76e-69 | 221 |
MS.gene20652.t1 | AT3G28130 | 39.429 | 350 | 196 | 6 | 10 | 352 | 10 | 350 | 1.75e-68 | 219 |
MS.gene20652.t1 | AT3G28070 | 39.276 | 359 | 200 | 6 | 3 | 355 | 12 | 358 | 8.93e-65 | 210 |
MS.gene20652.t1 | AT3G28080 | 38.841 | 345 | 191 | 5 | 17 | 355 | 18 | 348 | 1.08e-63 | 207 |
MS.gene20652.t1 | AT3G28070 | 39.179 | 268 | 152 | 4 | 94 | 355 | 4 | 266 | 1.10e-57 | 189 |
MS.gene20652.t1 | AT3G28080 | 39.179 | 268 | 153 | 4 | 94 | 355 | 4 | 267 | 2.89e-57 | 187 |
MS.gene20652.t1 | AT3G28080 | 39.179 | 268 | 153 | 4 | 94 | 355 | 4 | 267 | 2.89e-57 | 187 |
MS.gene20652.t1 | AT3G28080 | 39.179 | 268 | 153 | 4 | 94 | 355 | 4 | 267 | 2.89e-57 | 187 |
MS.gene20652.t1 | AT3G28080 | 39.179 | 268 | 153 | 4 | 94 | 355 | 4 | 267 | 2.89e-57 | 187 |
MS.gene20652.t1 | AT1G21890 | 34.688 | 320 | 191 | 4 | 37 | 341 | 35 | 351 | 1.39e-56 | 189 |
MS.gene20652.t1 | AT4G08300 | 32.698 | 367 | 231 | 8 | 9 | 362 | 6 | 369 | 5.69e-54 | 182 |
MS.gene20652.t1 | AT3G28130 | 37.970 | 266 | 151 | 5 | 94 | 352 | 6 | 264 | 2.50e-52 | 175 |
MS.gene20652.t1 | AT3G28130 | 37.970 | 266 | 151 | 5 | 94 | 352 | 6 | 264 | 2.50e-52 | 175 |
MS.gene20652.t1 | AT3G28070 | 39.871 | 311 | 173 | 5 | 3 | 307 | 12 | 314 | 8.18e-52 | 175 |
MS.gene20652.t1 | AT5G07050 | 34.426 | 305 | 185 | 4 | 38 | 330 | 43 | 344 | 2.79e-50 | 173 |
MS.gene20652.t1 | AT1G44800 | 32.047 | 337 | 202 | 6 | 10 | 332 | 8 | 331 | 1.52e-47 | 165 |
MS.gene20652.t1 | AT2G39510 | 34.756 | 328 | 196 | 8 | 13 | 330 | 8 | 327 | 1.82e-47 | 165 |
MS.gene20652.t1 | AT1G70260 | 32.948 | 346 | 219 | 5 | 10 | 344 | 9 | 352 | 4.49e-47 | 164 |
MS.gene20652.t1 | AT3G28130 | 40.873 | 252 | 141 | 3 | 10 | 255 | 10 | 259 | 3.22e-46 | 159 |
MS.gene20652.t1 | AT1G21890 | 34.507 | 284 | 170 | 3 | 37 | 307 | 35 | 315 | 3.87e-46 | 161 |
MS.gene20652.t1 | AT3G28100 | 41.463 | 246 | 136 | 3 | 17 | 256 | 18 | 261 | 5.82e-46 | 158 |
MS.gene20652.t1 | AT5G13670 | 31.176 | 340 | 217 | 8 | 13 | 340 | 8 | 342 | 1.69e-45 | 160 |
MS.gene20652.t1 | AT4G08290 | 31.642 | 335 | 214 | 8 | 34 | 360 | 33 | 360 | 4.99e-44 | 156 |
MS.gene20652.t1 | AT2G37460 | 32.899 | 307 | 192 | 6 | 30 | 329 | 32 | 331 | 5.53e-44 | 156 |
MS.gene20652.t1 | AT3G30340 | 30.612 | 343 | 210 | 8 | 30 | 352 | 28 | 362 | 7.16e-44 | 155 |
MS.gene20652.t1 | AT2G40900 | 30.492 | 305 | 194 | 4 | 37 | 334 | 35 | 328 | 1.81e-42 | 152 |
MS.gene20652.t1 | AT3G56620 | 30.928 | 291 | 196 | 3 | 37 | 326 | 35 | 321 | 2.25e-41 | 149 |
MS.gene20652.t1 | AT1G60050 | 29.315 | 365 | 239 | 6 | 1 | 349 | 4 | 365 | 2.89e-41 | 149 |
MS.gene20652.t1 | AT3G18200 | 30.650 | 323 | 213 | 5 | 38 | 355 | 60 | 376 | 5.39e-41 | 148 |
MS.gene20652.t1 | AT1G43650 | 35.179 | 307 | 193 | 4 | 32 | 336 | 26 | 328 | 1.11e-40 | 146 |
MS.gene20652.t1 | AT3G28080 | 35.470 | 234 | 141 | 4 | 128 | 355 | 1 | 230 | 1.54e-40 | 143 |
MS.gene20652.t1 | AT5G64700 | 32.424 | 330 | 198 | 5 | 32 | 339 | 27 | 353 | 2.94e-40 | 145 |
MS.gene20652.t1 | AT3G28070 | 35.043 | 234 | 141 | 4 | 128 | 355 | 1 | 229 | 5.17e-40 | 141 |
MS.gene20652.t1 | AT4G28040 | 33.224 | 304 | 191 | 5 | 32 | 333 | 27 | 320 | 8.87e-40 | 144 |
MS.gene20652.t1 | AT4G28040 | 33.224 | 304 | 191 | 5 | 32 | 333 | 27 | 320 | 8.87e-40 | 144 |
MS.gene20652.t1 | AT4G28040 | 33.224 | 304 | 191 | 5 | 32 | 333 | 27 | 320 | 8.87e-40 | 144 |
MS.gene20652.t1 | AT4G28040 | 33.224 | 304 | 191 | 5 | 32 | 333 | 27 | 320 | 8.87e-40 | 144 |
MS.gene20652.t1 | AT4G28040 | 33.224 | 304 | 191 | 5 | 32 | 333 | 27 | 320 | 8.87e-40 | 144 |
MS.gene20652.t1 | AT1G09380 | 30.462 | 325 | 215 | 5 | 10 | 326 | 5 | 326 | 8.95e-39 | 142 |
MS.gene20652.t1 | AT4G30420 | 31.751 | 337 | 220 | 6 | 28 | 356 | 13 | 347 | 1.42e-37 | 139 |
MS.gene20652.t1 | AT4G30420 | 31.751 | 337 | 220 | 6 | 28 | 356 | 23 | 357 | 1.55e-37 | 139 |
MS.gene20652.t1 | AT4G01430 | 27.701 | 361 | 235 | 8 | 13 | 364 | 9 | 352 | 1.80e-37 | 138 |
MS.gene20652.t1 | AT3G28130 | 43.842 | 203 | 107 | 2 | 10 | 207 | 10 | 210 | 1.99e-37 | 134 |
MS.gene20652.t1 | AT3G28100 | 45.178 | 197 | 101 | 2 | 17 | 208 | 18 | 212 | 8.61e-37 | 134 |
MS.gene20652.t1 | AT1G25270 | 29.846 | 325 | 215 | 5 | 14 | 330 | 4 | 323 | 2.80e-36 | 135 |
MS.gene20652.t1 | AT3G28130 | 34.483 | 232 | 138 | 5 | 128 | 352 | 1 | 225 | 4.33e-36 | 131 |
MS.gene20652.t1 | AT1G75500 | 28.652 | 356 | 227 | 8 | 32 | 365 | 39 | 389 | 9.36e-36 | 134 |
MS.gene20652.t1 | AT1G75500 | 28.652 | 356 | 227 | 8 | 32 | 365 | 39 | 389 | 9.36e-36 | 134 |
MS.gene20652.t1 | AT1G11450 | 28.614 | 332 | 229 | 5 | 13 | 340 | 16 | 343 | 1.05e-35 | 133 |
MS.gene20652.t1 | AT1G68170 | 30.631 | 333 | 216 | 6 | 5 | 329 | 8 | 333 | 1.21e-35 | 134 |
MS.gene20652.t1 | AT1G68170 | 31.494 | 308 | 199 | 5 | 30 | 329 | 20 | 323 | 6.57e-35 | 131 |
MS.gene20652.t1 | AT3G28080 | 52.632 | 152 | 70 | 1 | 17 | 168 | 18 | 167 | 4.58e-34 | 128 |
MS.gene20652.t1 | AT3G28080 | 38.636 | 88 | 51 | 1 | 268 | 355 | 218 | 302 | 6.45e-14 | 72.0 |
MS.gene20652.t1 | AT1G11460 | 28.261 | 322 | 223 | 4 | 13 | 329 | 16 | 334 | 8.35e-34 | 128 |
MS.gene20652.t1 | AT4G01440 | 28.013 | 307 | 211 | 5 | 38 | 337 | 35 | 338 | 9.04e-34 | 129 |
MS.gene20652.t1 | AT1G01070 | 28.704 | 324 | 220 | 5 | 13 | 329 | 16 | 335 | 9.71e-34 | 128 |
MS.gene20652.t1 | AT1G11450 | 29.431 | 299 | 203 | 5 | 46 | 340 | 5 | 299 | 8.21e-33 | 124 |
MS.gene20652.t1 | AT5G45370 | 28.664 | 307 | 206 | 6 | 32 | 336 | 39 | 334 | 8.58e-33 | 125 |
MS.gene20652.t1 | AT3G18200 | 31.727 | 249 | 163 | 3 | 111 | 355 | 1 | 246 | 5.63e-32 | 121 |
MS.gene20652.t1 | AT2G37450 | 28.852 | 357 | 211 | 8 | 12 | 360 | 8 | 329 | 6.44e-32 | 123 |
MS.gene20652.t1 | AT1G11450 | 29.153 | 295 | 201 | 5 | 50 | 340 | 2 | 292 | 1.68e-31 | 121 |
MS.gene20652.t1 | AT2G37450 | 32.342 | 269 | 162 | 6 | 100 | 360 | 1 | 257 | 6.67e-31 | 118 |
MS.gene20652.t1 | AT5G45370 | 27.469 | 324 | 212 | 7 | 32 | 336 | 39 | 358 | 6.75e-31 | 121 |
MS.gene20652.t1 | AT5G45370 | 27.469 | 324 | 212 | 7 | 32 | 336 | 39 | 358 | 6.75e-31 | 121 |
MS.gene20652.t1 | AT1G01070 | 29.455 | 275 | 184 | 4 | 61 | 329 | 18 | 288 | 7.67e-30 | 117 |
MS.gene20652.t1 | AT3G53210 | 29.195 | 298 | 201 | 5 | 38 | 329 | 35 | 328 | 3.11e-29 | 116 |
MS.gene20652.t1 | AT4G01430 | 27.632 | 304 | 207 | 7 | 13 | 307 | 9 | 308 | 3.85e-29 | 115 |
MS.gene20652.t1 | AT1G11450 | 30.677 | 251 | 170 | 3 | 93 | 340 | 2 | 251 | 7.95e-28 | 110 |
MS.gene20652.t1 | AT4G08290 | 33.333 | 228 | 140 | 7 | 34 | 253 | 33 | 256 | 2.47e-27 | 109 |
MS.gene20652.t1 | AT3G45870 | 27.829 | 327 | 213 | 8 | 15 | 324 | 14 | 334 | 3.35e-27 | 111 |
MS.gene20652.t1 | AT1G43650 | 37.778 | 225 | 134 | 4 | 32 | 254 | 26 | 246 | 4.41e-27 | 108 |
MS.gene20652.t1 | AT4G19185 | 26.849 | 365 | 231 | 10 | 25 | 362 | 25 | 380 | 1.51e-26 | 109 |
MS.gene20652.t1 | AT4G01440 | 26.354 | 277 | 197 | 4 | 38 | 310 | 35 | 308 | 3.19e-26 | 107 |
MS.gene20652.t1 | AT1G11450 | 26.421 | 299 | 213 | 4 | 13 | 307 | 16 | 311 | 5.01e-26 | 106 |
MS.gene20652.t1 | AT3G30340 | 30.342 | 234 | 153 | 4 | 30 | 257 | 28 | 257 | 9.87e-26 | 105 |
MS.gene20652.t1 | AT5G64700 | 31.890 | 254 | 159 | 4 | 13 | 255 | 8 | 258 | 1.40e-25 | 104 |
MS.gene20652.t1 | AT4G19185 | 26.552 | 290 | 189 | 6 | 91 | 362 | 19 | 302 | 1.55e-25 | 105 |
MS.gene20652.t1 | AT5G47470 | 29.537 | 281 | 187 | 5 | 74 | 349 | 117 | 391 | 8.35e-25 | 104 |
MS.gene20652.t1 | AT5G47470 | 29.537 | 281 | 187 | 5 | 74 | 349 | 89 | 363 | 9.40e-25 | 103 |
MS.gene20652.t1 | AT3G53210 | 29.237 | 236 | 161 | 3 | 99 | 329 | 37 | 271 | 2.67e-24 | 101 |
MS.gene20652.t1 | AT4G01440 | 27.826 | 230 | 160 | 3 | 114 | 337 | 1 | 230 | 6.08e-24 | 99.8 |
MS.gene20652.t1 | AT4G01440 | 27.826 | 230 | 160 | 3 | 114 | 337 | 1 | 230 | 6.08e-24 | 99.8 |
MS.gene20652.t1 | AT5G45370 | 26.848 | 257 | 169 | 5 | 98 | 336 | 1 | 256 | 7.96e-24 | 99.8 |
MS.gene20652.t1 | AT5G45370 | 26.848 | 257 | 169 | 5 | 98 | 336 | 1 | 256 | 7.96e-24 | 99.8 |
MS.gene20652.t1 | AT5G47470 | 29.434 | 265 | 177 | 4 | 74 | 333 | 117 | 376 | 1.39e-23 | 100 |
MS.gene20652.t1 | AT3G28080 | 61.333 | 75 | 29 | 0 | 94 | 168 | 4 | 78 | 1.61e-22 | 94.7 |
MS.gene20652.t1 | AT3G28080 | 38.636 | 88 | 51 | 1 | 268 | 355 | 129 | 213 | 1.98e-14 | 72.0 |
MS.gene20652.t1 | AT4G01450 | 27.385 | 325 | 229 | 4 | 13 | 335 | 10 | 329 | 1.71e-22 | 97.4 |
MS.gene20652.t1 | AT3G45870 | 26.774 | 310 | 204 | 8 | 15 | 307 | 14 | 317 | 7.93e-22 | 95.1 |
MS.gene20652.t1 | AT4G01440 | 28.378 | 222 | 152 | 4 | 38 | 255 | 35 | 253 | 1.07e-21 | 94.0 |
MS.gene20652.t1 | AT4G01450 | 26.966 | 267 | 188 | 4 | 13 | 277 | 10 | 271 | 1.07e-21 | 95.1 |
MS.gene20652.t1 | AT4G24980 | 26.894 | 264 | 137 | 6 | 74 | 330 | 25 | 239 | 1.93e-21 | 93.2 |
MS.gene20652.t1 | AT2G37450 | 30.165 | 242 | 149 | 6 | 127 | 360 | 61 | 290 | 3.85e-21 | 92.8 |
MS.gene20652.t1 | AT4G01450 | 28.163 | 245 | 169 | 4 | 13 | 255 | 10 | 249 | 4.76e-20 | 89.0 |
MS.gene20652.t1 | AT3G53210 | 30.043 | 233 | 150 | 6 | 38 | 261 | 35 | 263 | 4.05e-18 | 83.6 |
MS.gene20652.t1 | AT4G01430 | 26.432 | 227 | 148 | 4 | 144 | 364 | 2 | 215 | 8.65e-18 | 82.0 |
MS.gene20652.t1 | AT4G16620 | 27.852 | 298 | 183 | 7 | 54 | 333 | 51 | 334 | 1.38e-17 | 83.6 |
MS.gene20652.t1 | AT4G01450 | 32.903 | 155 | 100 | 2 | 13 | 166 | 10 | 161 | 5.11e-17 | 80.1 |
MS.gene20652.t1 | AT4G16620 | 26.693 | 251 | 153 | 6 | 100 | 333 | 1 | 237 | 5.41e-16 | 77.4 |
MS.gene20652.t1 | AT4G16620 | 26.693 | 251 | 153 | 6 | 100 | 333 | 1 | 237 | 5.41e-16 | 77.4 |
MS.gene20652.t1 | AT3G45870 | 27.016 | 248 | 159 | 7 | 15 | 245 | 14 | 256 | 7.64e-16 | 77.4 |
MS.gene20652.t1 | AT3G28060 | 34.146 | 123 | 79 | 2 | 186 | 307 | 33 | 154 | 7.31e-15 | 72.0 |
MS.gene20652.t1 | AT3G28070 | 52.336 | 107 | 49 | 1 | 21 | 127 | 25 | 129 | 4.41e-14 | 71.2 |
MS.gene20652.t1 | AT5G45370 | 24.336 | 226 | 152 | 5 | 129 | 336 | 74 | 298 | 4.74e-14 | 72.8 |
MS.gene20652.t1 | AT3G45870 | 25.701 | 214 | 140 | 5 | 127 | 324 | 49 | 259 | 1.06e-13 | 71.6 |
Find 76 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATGCAAAATTGTACTTCT+TGG | 0.205292 | 6.3:+3758152 | MS.gene20652:CDS |
CAGATGTTCATCTCAGGTTC+TGG | 0.220597 | 6.3:+3758796 | MS.gene20652:intron |
TTGGCCTTTATGCTGTATTA+TGG | 0.223355 | 6.3:+3761658 | MS.gene20652:CDS |
AATGCAAGTGCTTGGAAAAT+AGG | 0.243782 | 6.3:+3760282 | MS.gene20652:CDS |
ATTGTACTTCTTGGTTCAAT+AGG | 0.244538 | 6.3:+3758161 | MS.gene20652:CDS |
TGCCTGGTTAATTCGCTTAA+AGG | 0.266921 | 6.3:+3760836 | MS.gene20652:CDS |
AAGGTTAAAGTTAGTTCATC+TGG | 0.270631 | 6.3:-3760201 | None:intergenic |
TCATGCTAGCTGTCACATTC+AGG | 0.295531 | 6.3:+3758891 | MS.gene20652:CDS |
AAGCCATTTCAATGGTTTCT+TGG | 0.308159 | 6.3:-3757824 | None:intergenic |
TGGCCTTTATGCTGTATTAT+GGG | 0.329382 | 6.3:+3761659 | MS.gene20652:CDS |
ACAGAAAATTGTCAACTAAT+AGG | 0.335023 | 6.3:-3759693 | None:intergenic |
TGGCAGAACATCCATGTAAA+AGG | 0.335783 | 6.3:-3757784 | None:intergenic |
GCCTGGTTAATTCGCTTAAA+GGG | 0.338078 | 6.3:+3760837 | MS.gene20652:CDS |
GGCTTAGGTGTTATGTTCCT+TGG | 0.339770 | 6.3:+3760909 | MS.gene20652:CDS |
TCTCAGGTTCTGGGGTATAT+TGG | 0.347052 | 6.3:+3758806 | MS.gene20652:CDS |
ATTGCTATTTCTGCTGGCTT+AGG | 0.356854 | 6.3:+3760894 | MS.gene20652:CDS |
AGAGGAAGATGTTGGTTGTC+TGG | 0.358249 | 6.3:+3761701 | MS.gene20652:CDS |
CGAATTAACCAGGCACAAAC+TGG | 0.367967 | 6.3:-3760828 | None:intergenic |
AGTAGTAATGCAAAGGTAAC+AGG | 0.369400 | 6.3:+3759535 | MS.gene20652:CDS |
TTGTACTTCTTGGTTCAATA+GGG | 0.373657 | 6.3:+3758162 | MS.gene20652:CDS |
TTCAAAGCAGCCACACTTCA+AGG | 0.384126 | 6.3:+3757858 | MS.gene20652:CDS |
CAAAGCGACAGAAGAGATAG+AGG | 0.421652 | 6.3:+3761683 | MS.gene20652:CDS |
ATCTCTTTGCAGGTCAATAG+TGG | 0.424375 | 6.3:+3758106 | MS.gene20652:intron |
CTGCCAATTGTAGTGATCAT+AGG | 0.428483 | 6.3:+3757801 | MS.gene20652:CDS |
GTTCTAGAGCTTTGCAAAAG+AGG | 0.429644 | 6.3:-3761747 | None:intergenic |
GATTTAAGTTCGGTCATTGC+TGG | 0.431539 | 6.3:+3759664 | MS.gene20652:CDS |
GTTGCCTATTCTTATGCTGT+TGG | 0.437620 | 6.3:+3757900 | MS.gene20652:CDS |
CTTCAAATTGCTATTTCTGC+TGG | 0.447080 | 6.3:+3760888 | MS.gene20652:CDS |
CAAGTCAGTGGATTTAAGTT+CGG | 0.449291 | 6.3:+3759654 | MS.gene20652:CDS |
AGATGTTCATCTCAGGTTCT+GGG | 0.454294 | 6.3:+3758797 | MS.gene20652:intron |
TAGGCATTCCAGTTTGTGCC+TGG | 0.455986 | 6.3:+3760820 | MS.gene20652:CDS |
TCATCACTTCATCAACCAAC+TGG | 0.459623 | 6.3:+3759625 | MS.gene20652:CDS |
AGGCCAAGAAACCATTGAAA+TGG | 0.464401 | 6.3:+3757821 | MS.gene20652:CDS |
TGGCCTATGATCACTACAAT+TGG | 0.468261 | 6.3:-3757804 | None:intergenic |
GAAGAGATAGAGGAAGATGT+TGG | 0.468705 | 6.3:+3761693 | MS.gene20652:CDS |
AGAGGTGCATTCTCTGTAGA+TGG | 0.471517 | 6.3:-3761729 | None:intergenic |
AGTGAGTAAAGCCATTTCAA+TGG | 0.472353 | 6.3:-3757832 | None:intergenic |
TAATTACAGTTCTCCAACAC+TGG | 0.474884 | 6.3:+3758832 | MS.gene20652:CDS |
GGAGCCACAATAGTATCAAT+TGG | 0.491739 | 6.3:+3761639 | MS.gene20652:CDS |
CCCCTTTAAGCGAATTAACC+AGG | 0.492792 | 6.3:-3760838 | None:intergenic |
CTTCTAGTGAAAAGTGTGAC+AGG | 0.493313 | 6.3:-3757939 | None:intergenic |
TGCCCCATAATACAGCATAA+AGG | 0.494234 | 6.3:-3761662 | None:intergenic |
AGTACCAACAGCATAAGAAT+AGG | 0.500545 | 6.3:-3757904 | None:intergenic |
CAGTTCCAAATGCAAGTGCT+TGG | 0.511231 | 6.3:+3760274 | MS.gene20652:CDS |
CTTGGTGATACTCTTCATGT+TGG | 0.518377 | 6.3:+3760927 | MS.gene20652:CDS |
GTTATGCAGATGTTCATCTC+AGG | 0.521284 | 6.3:+3758790 | MS.gene20652:intron |
GTGATACTCTTCATGTTGGA+AGG | 0.531126 | 6.3:+3760931 | MS.gene20652:CDS |
GCAGAAATAGCAATTTGAAG+TGG | 0.535006 | 6.3:-3760885 | None:intergenic |
TGATATGATGGTGGCAGTAA+TGG | 0.535383 | 6.3:-3760232 | None:intergenic |
AATTTGAAGTGGTTTGAATG+AGG | 0.537560 | 6.3:-3760874 | None:intergenic |
GGCCTTTATGCTGTATTATG+GGG | 0.546828 | 6.3:+3761660 | MS.gene20652:CDS |
CCTGGTTAATTCGCTTAAAG+GGG | 0.547349 | 6.3:+3760838 | MS.gene20652:CDS |
GGAAGCATAATATCAATAGC+AGG | 0.547962 | 6.3:+3759556 | MS.gene20652:CDS |
AGGTTAAAGTTAGTTCATCT+GGG | 0.563018 | 6.3:-3760200 | None:intergenic |
AACTGGCTTTCTCAAGTCAG+TGG | 0.565881 | 6.3:+3759642 | MS.gene20652:CDS |
AGCTACAACTGTTGATATGA+TGG | 0.566150 | 6.3:-3760244 | None:intergenic |
AGTGAAAGCAGGTATCAGAT+TGG | 0.579041 | 6.3:-3758867 | None:intergenic |
GAGTAGAAGTAGTAATGCAA+AGG | 0.579728 | 6.3:+3759528 | MS.gene20652:CDS |
GATGTTCATCTCAGGTTCTG+GGG | 0.590517 | 6.3:+3758798 | MS.gene20652:intron |
GTTGTTCATTCCTTGAAGTG+TGG | 0.597270 | 6.3:-3757868 | None:intergenic |
GATGAGGAATTCATGATAGA+CGG | 0.601928 | 6.3:-3759607 | None:intergenic |
ACAGAAACATGACAAGAAGA+TGG | 0.606873 | 6.3:+3757760 | None:intergenic |
AAGGCCAATTGATACTATTG+TGG | 0.610313 | 6.3:-3761643 | None:intergenic |
GCAAGTGCTGAAGCCAGTGT+TGG | 0.612502 | 6.3:-3758845 | None:intergenic |
GCTAGCATGAAAGTGAAAGC+AGG | 0.612594 | 6.3:-3758878 | None:intergenic |
TTTGTGATGACTTTCTACAA+AGG | 0.624165 | 6.3:+3759583 | MS.gene20652:CDS |
AAGAATAGGCAACAAAGACA+TGG | 0.624601 | 6.3:-3757890 | None:intergenic |
CTGGTTAATTCGCTTAAAGG+GGG | 0.632942 | 6.3:+3760839 | MS.gene20652:CDS |
CATATTATGGAGAAACTGAG+TGG | 0.634950 | 6.3:-3758134 | None:intergenic |
GGCAGTAATGGAGTATAACA+AGG | 0.635268 | 6.3:-3760220 | None:intergenic |
GTATCTTACAGAAGAAACAA+TGG | 0.651595 | 6.3:-3760325 | None:intergenic |
ACTGACTTGAGAAAGCCAGT+TGG | 0.681532 | 6.3:-3759640 | None:intergenic |
ATTATGGAGAAACTGAGTGG+AGG | 0.695460 | 6.3:-3758131 | None:intergenic |
TACAACTGTTGATATGATGG+TGG | 0.721627 | 6.3:-3760241 | None:intergenic |
AGTTGGTTGATGAAGTGATG+AGG | 0.724703 | 6.3:-3759623 | None:intergenic |
CAACATGAAGAGTATCACCA+AGG | 0.728939 | 6.3:-3760926 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTGAAAATAAAACAAA+TGG | + | chr6.3:3761774-3761793 | MS.gene20652:CDS | 10.0% |
!!! | TATTTTTTTTGTCTTAAAAA+GGG | - | chr6.3:3758669-3758688 | None:intergenic | 10.0% |
!! | AAATATTGTAGTAAAGTATA+GGG | - | chr6.3:3758203-3758222 | None:intergenic | 15.0% |
!! | AATCATTTATACAATATGTT+AGG | - | chr6.3:3758447-3758466 | None:intergenic | 15.0% |
!! | ATCATTTATACAATATGTTA+GGG | - | chr6.3:3758446-3758465 | None:intergenic | 15.0% |
!! | ATTAATATCAATGGTTTATA+TGG | + | chr6.3:3761049-3761068 | MS.gene20652:intron | 15.0% |
!! | TACTCAATAATTAATATCAA+TGG | + | chr6.3:3761040-3761059 | MS.gene20652:intron | 15.0% |
!! | TCCATATTTCAAATTATTAT+TGG | - | chr6.3:3759851-3759870 | None:intergenic | 15.0% |
!! | TTAATATCAATGGTTTATAT+GGG | + | chr6.3:3761050-3761069 | MS.gene20652:intron | 15.0% |
!!! | ACCAATAATAATTTGAAATA+TGG | + | chr6.3:3759847-3759866 | MS.gene20652:intron | 15.0% |
!!! | GTATTTTTTTTGTCTTAAAA+AGG | - | chr6.3:3758670-3758689 | None:intergenic | 15.0% |
!!! | TATTTTATTATATATGAGAG+CGG | + | chr6.3:3759045-3759064 | MS.gene20652:intron | 15.0% |
!!! | TTCGTTTTTTTTTTTTGTAA+AGG | - | chr6.3:3761218-3761237 | None:intergenic | 15.0% |
!!! | TTTCATGTTTTGTAATTTTT+TGG | + | chr6.3:3758763-3758782 | MS.gene20652:intron | 15.0% |
!! | AAATATACACTTAAAAATCG+TGG | + | chr6.3:3760589-3760608 | MS.gene20652:intron | 20.0% |
!! | ACTCAAATATGTTGAAAAAT+AGG | - | chr6.3:3761533-3761552 | None:intergenic | 20.0% |
!! | AGATTGTGTTCAAATATAAA+TGG | + | chr6.3:3760541-3760560 | MS.gene20652:intron | 20.0% |
!! | ATAAGAGGAAACAAAATAAA+TGG | - | chr6.3:3759474-3759493 | None:intergenic | 20.0% |
!! | ATATTTACTTGTAAAGGATT+TGG | - | chr6.3:3760082-3760101 | None:intergenic | 20.0% |
!! | CAAATATTGTAGTAAAGTAT+AGG | - | chr6.3:3758204-3758223 | None:intergenic | 20.0% |
!! | CTTATGAAATACTCTTAAAT+AGG | + | chr6.3:3758259-3758278 | MS.gene20652:intron | 20.0% |
!! | GAAGAAATATTTACTTGTAA+AGG | - | chr6.3:3760088-3760107 | None:intergenic | 20.0% |
!! | TAACATAATTAAAAGAAGAG+TGG | - | chr6.3:3760036-3760055 | None:intergenic | 20.0% |
!! | TGAAAAATTTACACCATTTA+AGG | + | chr6.3:3760742-3760761 | MS.gene20652:intron | 20.0% |
!!! | AAAAACGAATTGATTCTTTT+TGG | + | chr6.3:3761229-3761248 | MS.gene20652:intron | 20.0% |
!!! | AAGTACAATTTTGCATATTA+TGG | - | chr6.3:3758150-3758169 | None:intergenic | 20.0% |
!!! | ATCAATTCGGTTTTTTTTAA+AGG | - | chr6.3:3761271-3761290 | None:intergenic | 20.0% |
!!! | ATTACACAACTCAAATATTT+TGG | - | chr6.3:3760375-3760394 | None:intergenic | 20.0% |
!!! | TTTTTAATATTAAAAGCGTG+CGG | + | chr6.3:3759284-3759303 | MS.gene20652:intron | 20.0% |
! | AAAACCAAAACTGAATTAGA+AGG | + | chr6.3:3761370-3761389 | MS.gene20652:intron | 25.0% |
! | AAACTCAACTGAACTATTAA+TGG | + | chr6.3:3761136-3761155 | MS.gene20652:intron | 25.0% |
! | AAATATGTTGAAAAATAGGC+AGG | - | chr6.3:3761529-3761548 | None:intergenic | 25.0% |
! | AAATTCATCAACTACTAAGA+CGG | - | chr6.3:3760689-3760708 | None:intergenic | 25.0% |
! | ACAGAAAATTGTCAACTAAT+AGG | - | chr6.3:3759696-3759715 | None:intergenic | 25.0% |
! | ACTCTATTAAACTATCAAGT+TGG | + | chr6.3:3758318-3758337 | MS.gene20652:intron | 25.0% |
! | ATAAAGTTCACAACCTTAAA+TGG | - | chr6.3:3760758-3760777 | None:intergenic | 25.0% |
! | ATATGCAAAATTGTACTTCT+TGG | + | chr6.3:3758152-3758171 | MS.gene20652:CDS | 25.0% |
! | ATATTAAGTGGTTGAGTATA+AGG | - | chr6.3:3758345-3758364 | None:intergenic | 25.0% |
! | ATATTTGAACACAATCTGAA+TGG | - | chr6.3:3760538-3760557 | None:intergenic | 25.0% |
! | CAAATTACTAGTACACTAAA+AGG | - | chr6.3:3758580-3758599 | None:intergenic | 25.0% |
! | GAGACTTAATCAATATTAAG+TGG | - | chr6.3:3758357-3758376 | None:intergenic | 25.0% |
! | TTAGTGTATCTTTGAATTGA+CGG | + | chr6.3:3758020-3758039 | MS.gene20652:intron | 25.0% |
! | TTCAACACTTAAAAAAGTAG+TGG | - | chr6.3:3760496-3760515 | None:intergenic | 25.0% |
! | TTGAGTAGACTATTAATATC+CGG | - | chr6.3:3761027-3761046 | None:intergenic | 25.0% |
!! | AAATTTAGCTTCAACTTAGA+TGG | + | chr6.3:3760418-3760437 | MS.gene20652:intron | 25.0% |
!! | AGTTATTGATAGTTGATTAG+TGG | - | chr6.3:3759244-3759263 | None:intergenic | 25.0% |
!! | ATGTATCTGTTTTACAATGT+AGG | + | chr6.3:3758984-3759003 | MS.gene20652:intron | 25.0% |
!! | CTTTTAGTGTACTAGTAATT+TGG | + | chr6.3:3758578-3758597 | MS.gene20652:intron | 25.0% |
!! | GACTAATTTAGTGTTTTACT+CGG | + | chr6.3:3758554-3758573 | MS.gene20652:intron | 25.0% |
!! | TGAACTATTAGTCACATTTT+GGG | + | chr6.3:3761420-3761439 | MS.gene20652:intron | 25.0% |
!! | TTTTCATTGTGCAGTATAAT+TGG | + | chr6.3:3761618-3761637 | MS.gene20652:intron | 25.0% |
!! | TTTTCCTTCTAATTCAGTTT+TGG | - | chr6.3:3761377-3761396 | None:intergenic | 25.0% |
!!! | AAAACCGAATTGATTTTTTG+TGG | + | chr6.3:3761277-3761296 | MS.gene20652:intron | 25.0% |
!!! | AAAGAGTGTCATTAATTGTA+TGG | + | chr6.3:3758735-3758754 | MS.gene20652:intron | 25.0% |
!!! | AAATTAGTCATTGACTTTGT+AGG | - | chr6.3:3758543-3758562 | None:intergenic | 25.0% |
!!! | ATGTTGATGTTAGTTTGTTT+TGG | + | chr6.3:3758710-3758729 | MS.gene20652:intron | 25.0% |
!!! | GTATATTTTTGTGGTAAGTA+GGG | + | chr6.3:3759726-3759745 | MS.gene20652:intron | 25.0% |
!!! | TCTTAGTAGTTGATGAATTT+TGG | + | chr6.3:3760689-3760708 | MS.gene20652:intron | 25.0% |
!!! | TTCACTATGGTATATTTTTG+TGG | + | chr6.3:3759717-3759736 | MS.gene20652:CDS | 25.0% |
!!! | TTTTAATATTAAAAGCGTGC+GGG | + | chr6.3:3759285-3759304 | MS.gene20652:intron | 25.0% |
AAAAAAAAATTCCCCAATGG+GGG | + | chr6.3:3759361-3759380 | MS.gene20652:intron | 30.0% | |
AAGGTTAAAGTTAGTTCATC+TGG | - | chr6.3:3760204-3760223 | None:intergenic | 30.0% | |
AGGTTAAAGTTAGTTCATCT+GGG | - | chr6.3:3760203-3760222 | None:intergenic | 30.0% | |
AGTTCCTTTATTCATTTCAC+AGG | + | chr6.3:3760158-3760177 | MS.gene20652:intron | 30.0% | |
ATTGTACTTCTTGGTTCAAT+AGG | + | chr6.3:3758161-3758180 | MS.gene20652:CDS | 30.0% | |
CAAAAAAAAATTCCCCAATG+GGG | + | chr6.3:3759360-3759379 | MS.gene20652:intron | 30.0% | |
CCAAAAAAAAATTCCCCAAT+GGG | + | chr6.3:3759359-3759378 | MS.gene20652:intron | 30.0% | |
CCATTTAAGTACCCAAAAAT+GGG | - | chr6.3:3759118-3759137 | None:intergenic | 30.0% | |
CTATCATCGACCAATAATAA+GGG | + | chr6.3:3761319-3761338 | MS.gene20652:intron | 30.0% | |
CTCACACAAAGTTCTTAAAT+GGG | + | chr6.3:3759216-3759235 | MS.gene20652:intron | 30.0% | |
CTTATCATTGCAATTAAGGA+TGG | + | chr6.3:3759489-3759508 | MS.gene20652:intron | 30.0% | |
CTTTCAAAAGCCCTTATTAT+TGG | - | chr6.3:3761332-3761351 | None:intergenic | 30.0% | |
GCCTATAAACTTTGCAAAAA+TGG | - | chr6.3:3760805-3760824 | None:intergenic | 30.0% | |
GGTGGAAATTTACTTATTTC+AGG | + | chr6.3:3758622-3758641 | MS.gene20652:intron | 30.0% | |
GTATCTTACAGAAGAAACAA+TGG | - | chr6.3:3760328-3760347 | None:intergenic | 30.0% | |
GTTAATGACGTTCAAAATTG+TGG | + | chr6.3:3760611-3760630 | MS.gene20652:intron | 30.0% | |
TATATGGGTAATTCTTGGTT+CGG | + | chr6.3:3761065-3761084 | MS.gene20652:intron | 30.0% | |
TATGAAAATTGACACAGTCA+CGG | + | chr6.3:3759790-3759809 | MS.gene20652:intron | 30.0% | |
TCCTCTTATCATTGCAATTA+AGG | + | chr6.3:3759485-3759504 | MS.gene20652:intron | 30.0% | |
TCCTTAATTGCAATGATAAG+AGG | - | chr6.3:3759489-3759508 | None:intergenic | 30.0% | |
TCTCACACAAAGTTCTTAAA+TGG | + | chr6.3:3759215-3759234 | MS.gene20652:intron | 30.0% | |
TGATTCTTTGCTTGAAACAT+GGG | + | chr6.3:3760978-3760997 | MS.gene20652:intron | 30.0% | |
TGGTTTATATGGGTAATTCT+TGG | + | chr6.3:3761060-3761079 | MS.gene20652:intron | 30.0% | |
TGTAAAGGATTTGGATTCTA+CGG | - | chr6.3:3760073-3760092 | None:intergenic | 30.0% | |
TGTACCTGTGAAATGAATAA+AGG | - | chr6.3:3760165-3760184 | None:intergenic | 30.0% | |
TGTGATGGTTAACTTCTAAA+AGG | - | chr6.3:3758232-3758251 | None:intergenic | 30.0% | |
TGTTTCTTCTGTAAGATACT+CGG | + | chr6.3:3760329-3760348 | MS.gene20652:intron | 30.0% | |
TTATTATATATGAGAGCGGA+GGG | + | chr6.3:3759049-3759068 | MS.gene20652:intron | 30.0% | |
TTCATAAGAGACAAATGTGA+TGG | - | chr6.3:3758247-3758266 | None:intergenic | 30.0% | |
TTCTTATATATAAGACCCGA+GGG | - | chr6.3:3758933-3758952 | None:intergenic | 30.0% | |
TTGATTCTTTGCTTGAAACA+TGG | + | chr6.3:3760977-3760996 | MS.gene20652:intron | 30.0% | |
TTGTACTTCTTGGTTCAATA+GGG | + | chr6.3:3758162-3758181 | MS.gene20652:CDS | 30.0% | |
TTTATTATATATGAGAGCGG+AGG | + | chr6.3:3759048-3759067 | MS.gene20652:intron | 30.0% | |
TTTCTTATATATAAGACCCG+AGG | - | chr6.3:3758934-3758953 | None:intergenic | 30.0% | |
TTTGTGATGACTTTCTACAA+AGG | + | chr6.3:3759583-3759602 | MS.gene20652:CDS | 30.0% | |
! | AATTTGAAGTGGTTTGAATG+AGG | - | chr6.3:3760877-3760896 | None:intergenic | 30.0% |
! | ACAATTTTCTGTCTTCACTA+TGG | + | chr6.3:3759704-3759723 | MS.gene20652:CDS | 30.0% |
! | GATAGCAATTTTGTACATGT+CGG | - | chr6.3:3761304-3761323 | None:intergenic | 30.0% |
! | GATGACACATTTCTTTTTCT+AGG | + | chr6.3:3760779-3760798 | MS.gene20652:intron | 30.0% |
! | GTGAACTATTAGTCACATTT+TGG | + | chr6.3:3761419-3761438 | MS.gene20652:intron | 30.0% |
! | TTTTCTTTCACAACCATATG+TGG | + | chr6.3:3761501-3761520 | MS.gene20652:intron | 30.0% |
!! | GGTATATTTTTGTGGTAAGT+AGG | + | chr6.3:3759725-3759744 | MS.gene20652:intron | 30.0% |
!!! | ATTGGGGAATTTTTTTTTGG+GGG | - | chr6.3:3759359-3759378 | None:intergenic | 30.0% |
!!! | CATTGGGGAATTTTTTTTTG+GGG | - | chr6.3:3759360-3759379 | None:intergenic | 30.0% |
!!! | CCATTGGGGAATTTTTTTTT+GGG | - | chr6.3:3759361-3759380 | None:intergenic | 30.0% |
!!! | CCATTTTTGGGTACTTAAAT+GGG | + | chr6.3:3759116-3759135 | MS.gene20652:intron | 30.0% |
!!! | GATTCTTTTTGGAATCAAAC+TGG | + | chr6.3:3761240-3761259 | MS.gene20652:intron | 30.0% |
!!! | GCCATTTTTGCAAAGTTTAT+AGG | + | chr6.3:3760801-3760820 | MS.gene20652:CDS | 30.0% |
!!! | GTTTTCGTTGTGGTTTTATT+CGG | + | chr6.3:3761442-3761461 | MS.gene20652:intron | 30.0% |
!!! | TTGTAAAGGTATTTTCAGCT+TGG | - | chr6.3:3761204-3761223 | None:intergenic | 30.0% |
AAGAACTTTGTGTGAGATCT+GGG | - | chr6.3:3759212-3759231 | None:intergenic | 35.0% | |
AAGAATAGGCAACAAAGACA+TGG | - | chr6.3:3757893-3757912 | None:intergenic | 35.0% | |
AAGCCATTTCAATGGTTTCT+TGG | - | chr6.3:3757827-3757846 | None:intergenic | 35.0% | |
AAGGCCAATTGATACTATTG+TGG | - | chr6.3:3761646-3761665 | None:intergenic | 35.0% | |
AATGCAAGTGCTTGGAAAAT+AGG | + | chr6.3:3760282-3760301 | MS.gene20652:CDS | 35.0% | |
AGCTACAACTGTTGATATGA+TGG | - | chr6.3:3760247-3760266 | None:intergenic | 35.0% | |
AGTACCAACAGCATAAGAAT+AGG | - | chr6.3:3757907-3757926 | None:intergenic | 35.0% | |
AGTAGACTATTAATATCCGG+TGG | - | chr6.3:3761024-3761043 | None:intergenic | 35.0% | |
AGTAGTAATGCAAAGGTAAC+AGG | + | chr6.3:3759535-3759554 | MS.gene20652:CDS | 35.0% | |
AGTGAGTAAAGCCATTTCAA+TGG | - | chr6.3:3757835-3757854 | None:intergenic | 35.0% | |
ATTAAGACACCGTACCTAAT+AGG | - | chr6.3:3759389-3759408 | None:intergenic | 35.0% | |
ATTAGGTACGGTGTCTTAAT+TGG | + | chr6.3:3759389-3759408 | MS.gene20652:intron | 35.0% | |
CACAAAATTGGTGCACTAAT+CGG | - | chr6.3:3761173-3761192 | None:intergenic | 35.0% | |
CATATTATGGAGAAACTGAG+TGG | - | chr6.3:3758137-3758156 | None:intergenic | 35.0% | |
CCCAAAAAAAAATTCCCCAA+TGG | + | chr6.3:3759358-3759377 | MS.gene20652:intron | 35.0% | |
CCCATTTAAGTACCCAAAAA+TGG | - | chr6.3:3759119-3759138 | None:intergenic | 35.0% | |
CGGTCCACAAAAAATCAATT+CGG | - | chr6.3:3761284-3761303 | None:intergenic | 35.0% | |
GAGTAGAAGTAGTAATGCAA+AGG | + | chr6.3:3759528-3759547 | MS.gene20652:CDS | 35.0% | |
GATGAGGAATTCATGATAGA+CGG | - | chr6.3:3759610-3759629 | None:intergenic | 35.0% | |
GATTCTTTGCTTGAAACATG+GGG | + | chr6.3:3760979-3760998 | MS.gene20652:intron | 35.0% | |
GCAGAAATAGCAATTTGAAG+TGG | - | chr6.3:3760888-3760907 | None:intergenic | 35.0% | |
GCTATCATCGACCAATAATA+AGG | + | chr6.3:3761318-3761337 | MS.gene20652:intron | 35.0% | |
GGGACTAAATTGTTAGTAAG+CGG | - | chr6.3:3758426-3758445 | None:intergenic | 35.0% | |
GTAGACTATTAATATCCGGT+GGG | - | chr6.3:3761023-3761042 | None:intergenic | 35.0% | |
GTTAACGAAGTTCAAAGTCA+TGG | - | chr6.3:3760474-3760493 | None:intergenic | 35.0% | |
GTTTCAGTTCAGTTTCAGTT+CGG | + | chr6.3:3761471-3761490 | MS.gene20652:intron | 35.0% | |
TAAGAACTTTGTGTGAGATC+TGG | - | chr6.3:3759213-3759232 | None:intergenic | 35.0% | |
TAAGACGGTTAACGCAATTT+AGG | - | chr6.3:3760674-3760693 | None:intergenic | 35.0% | |
TAATTACAGTTCTCCAACAC+TGG | + | chr6.3:3758832-3758851 | MS.gene20652:CDS | 35.0% | |
TACAACTGTTGATATGATGG+TGG | - | chr6.3:3760244-3760263 | None:intergenic | 35.0% | |
TCGAAATACTCGTAATCTCA+AGG | - | chr6.3:3758286-3758305 | None:intergenic | 35.0% | |
TCTCTGACTGAAACAATCTT+CGG | + | chr6.3:3758601-3758620 | MS.gene20652:intron | 35.0% | |
TGGCCTTTATGCTGTATTAT+GGG | + | chr6.3:3761659-3761678 | MS.gene20652:CDS | 35.0% | |
TTAAGACCCCCAACTTTAAA+CGG | - | chr6.3:3759313-3759332 | None:intergenic | 35.0% | |
TTCTTGGTTCAATAGGGTAA+TGG | + | chr6.3:3758168-3758187 | MS.gene20652:intron | 35.0% | |
TTGGTTGGAAACCACAAAAT+TGG | - | chr6.3:3761185-3761204 | None:intergenic | 35.0% | |
TTGTGGTTAAATGTATCGAG+TGG | + | chr6.3:3760628-3760647 | MS.gene20652:intron | 35.0% | |
TTTGCTAGTTAGTATTCCCT+CGG | + | chr6.3:3758914-3758933 | MS.gene20652:intron | 35.0% | |
! | AACAGAGTCAGATACTCTTT+TGG | + | chr6.3:3758482-3758501 | MS.gene20652:intron | 35.0% |
! | AAGAAGATGGTCCTTTTACA+TGG | + | chr6.3:3757773-3757792 | MS.gene20652:CDS | 35.0% |
! | ATTTTCCAAGCACTTGCATT+TGG | - | chr6.3:3760282-3760301 | None:intergenic | 35.0% |
! | ATTTTTGTGGTAAGTAGGGT+AGG | + | chr6.3:3759730-3759749 | MS.gene20652:intron | 35.0% |
! | CAAGTCAGTGGATTTAAGTT+CGG | + | chr6.3:3759654-3759673 | MS.gene20652:CDS | 35.0% |
! | CAATAGGGTAATGGCAAAAA+TGG | + | chr6.3:3758177-3758196 | MS.gene20652:intron | 35.0% |
! | CACTTTTCACTAGAAGTAGA+AGG | + | chr6.3:3757946-3757965 | MS.gene20652:CDS | 35.0% |
! | GGAAGCATAATATCAATAGC+AGG | + | chr6.3:3759556-3759575 | MS.gene20652:CDS | 35.0% |
! | TAAAAAGGGTTCTGATAGTC+TGG | - | chr6.3:3758655-3758674 | None:intergenic | 35.0% |
! | TGCTTTTCATATCTCTTTGC+AGG | + | chr6.3:3758096-3758115 | MS.gene20652:intron | 35.0% |
! | TTGGCCTTTATGCTGTATTA+TGG | + | chr6.3:3761658-3761677 | MS.gene20652:CDS | 35.0% |
!! | CTTCAAATTGCTATTTCTGC+TGG | + | chr6.3:3760888-3760907 | MS.gene20652:CDS | 35.0% |
!!! | AAAGGTATTTTCAGCTTGGT+TGG | - | chr6.3:3761200-3761219 | None:intergenic | 35.0% |
!!! | CCCATTGGGGAATTTTTTTT+TGG | - | chr6.3:3759362-3759381 | None:intergenic | 35.0% |
!!! | CCCATTTTTGGGTACTTAAA+TGG | + | chr6.3:3759115-3759134 | MS.gene20652:intron | 35.0% |
AAAAATGGGTGTCTCCATTG+TGG | - | chr6.3:3759104-3759123 | None:intergenic | 40.0% | |
AATTGGTGCACTAATCGGTT+TGG | - | chr6.3:3761168-3761187 | None:intergenic | 40.0% | |
ACTCTTCATGTTGGAAGGTA+TGG | + | chr6.3:3760936-3760955 | MS.gene20652:intron | 40.0% | |
AGATGTTCATCTCAGGTTCT+GGG | + | chr6.3:3758797-3758816 | MS.gene20652:intron | 40.0% | |
AGGCCAAGAAACCATTGAAA+TGG | + | chr6.3:3757821-3757840 | MS.gene20652:CDS | 40.0% | |
AGTGAAAGCAGGTATCAGAT+TGG | - | chr6.3:3758870-3758889 | None:intergenic | 40.0% | |
ATCTCTTTGCAGGTCAATAG+TGG | + | chr6.3:3758106-3758125 | MS.gene20652:intron | 40.0% | |
ATTATGGAGAAACTGAGTGG+AGG | - | chr6.3:3758134-3758153 | None:intergenic | 40.0% | |
ATTGGTAAAGACACCACCAT+TGG | + | chr6.3:3759407-3759426 | MS.gene20652:intron | 40.0% | |
CAATATCAACACTAGCACGT+AGG | + | chr6.3:3759823-3759842 | MS.gene20652:intron | 40.0% | |
CATGGGGAAGCAAATATAGA+AGG | + | chr6.3:3760995-3761014 | MS.gene20652:intron | 40.0% | |
CCTGGTTAATTCGCTTAAAG+GGG | + | chr6.3:3760838-3760857 | MS.gene20652:CDS | 40.0% | |
CTGCCAATTGTAGTGATCAT+AGG | + | chr6.3:3757801-3757820 | MS.gene20652:CDS | 40.0% | |
CTGGTTAATTCGCTTAAAGG+GGG | + | chr6.3:3760839-3760858 | MS.gene20652:CDS | 40.0% | |
GAAGAGATAGAGGAAGATGT+TGG | + | chr6.3:3761693-3761712 | MS.gene20652:CDS | 40.0% | |
GCCTGGTTAATTCGCTTAAA+GGG | + | chr6.3:3760837-3760856 | MS.gene20652:CDS | 40.0% | |
GGAGCCACAATAGTATCAAT+TGG | + | chr6.3:3761639-3761658 | MS.gene20652:CDS | 40.0% | |
GGCCTTTATGCTGTATTATG+GGG | + | chr6.3:3761660-3761679 | MS.gene20652:CDS | 40.0% | |
GTCCAACATGCATCAATGTT+TGG | - | chr6.3:3759957-3759976 | None:intergenic | 40.0% | |
GTGATACTCTTCATGTTGGA+AGG | + | chr6.3:3760931-3760950 | MS.gene20652:CDS | 40.0% | |
GTTATGCAGATGTTCATCTC+AGG | + | chr6.3:3758790-3758809 | MS.gene20652:intron | 40.0% | |
GTTGCCTATTCTTATGCTGT+TGG | + | chr6.3:3757900-3757919 | MS.gene20652:CDS | 40.0% | |
GTTGTTCATTCCTTGAAGTG+TGG | - | chr6.3:3757871-3757890 | None:intergenic | 40.0% | |
TAAGACCCCCAACTTTAAAC+GGG | - | chr6.3:3759312-3759331 | None:intergenic | 40.0% | |
TCATCACTTCATCAACCAAC+TGG | + | chr6.3:3759625-3759644 | MS.gene20652:CDS | 40.0% | |
TGCCAAACATTGATGCATGT+TGG | + | chr6.3:3759952-3759971 | MS.gene20652:intron | 40.0% | |
TGCCCCATAATACAGCATAA+AGG | - | chr6.3:3761665-3761684 | None:intergenic | 40.0% | |
TGCCTGGTTAATTCGCTTAA+AGG | + | chr6.3:3760836-3760855 | MS.gene20652:CDS | 40.0% | |
TGGCAGAACATCCATGTAAA+AGG | - | chr6.3:3757787-3757806 | None:intergenic | 40.0% | |
TGGCCTATGATCACTACAAT+TGG | - | chr6.3:3757807-3757826 | None:intergenic | 40.0% | |
TTCAGTTCAGTCTTCCTTTC+TGG | - | chr6.3:3761092-3761111 | None:intergenic | 40.0% | |
TTGCTAGTTAGTATTCCCTC+GGG | + | chr6.3:3758915-3758934 | MS.gene20652:intron | 40.0% | |
TTGGTAAAGACACCACCATT+GGG | + | chr6.3:3759408-3759427 | MS.gene20652:intron | 40.0% | |
! | ACAATGGAGACACCCATTTT+TGG | + | chr6.3:3759103-3759122 | MS.gene20652:intron | 40.0% |
! | CGATTAGTGCACCAATTTTG+TGG | + | chr6.3:3761171-3761190 | MS.gene20652:intron | 40.0% |
! | CTTCTAGTGAAAAGTGTGAC+AGG | - | chr6.3:3757942-3757961 | None:intergenic | 40.0% |
! | CTTGGTGATACTCTTCATGT+TGG | + | chr6.3:3760927-3760946 | MS.gene20652:CDS | 40.0% |
! | GATTTAAGTTCGGTCATTGC+TGG | + | chr6.3:3759664-3759683 | MS.gene20652:CDS | 40.0% |
! | GGCAGTAATGGAGTATAACA+AGG | - | chr6.3:3760223-3760242 | None:intergenic | 40.0% |
!! | AGTTGGTTGATGAAGTGATG+AGG | - | chr6.3:3759626-3759645 | None:intergenic | 40.0% |
!! | ATTGCTATTTCTGCTGGCTT+AGG | + | chr6.3:3760894-3760913 | MS.gene20652:CDS | 40.0% |
!! | CAACATGAAGAGTATCACCA+AGG | - | chr6.3:3760929-3760948 | None:intergenic | 40.0% |
!! | CAATGGAGACACCCATTTTT+GGG | + | chr6.3:3759104-3759123 | MS.gene20652:intron | 40.0% |
!! | GCTAGTGTTGATATTGTGTC+TGG | - | chr6.3:3759819-3759838 | None:intergenic | 40.0% |
!! | TGATATGATGGTGGCAGTAA+TGG | - | chr6.3:3760235-3760254 | None:intergenic | 40.0% |
!!! | CACATTTTGGGTTTTCGTTG+TGG | + | chr6.3:3761432-3761451 | MS.gene20652:intron | 40.0% |
AAATAGGCAGGCTCCACATA+TGG | - | chr6.3:3761517-3761536 | None:intergenic | 45.0% | |
ACCTAATAGGTACCCCCATT+GGG | - | chr6.3:3759376-3759395 | None:intergenic | 45.0% | |
ACTTTGTGTGAGATCTGGGT+TGG | - | chr6.3:3759208-3759227 | None:intergenic | 45.0% | |
ATAGTTCACCAACAGAGCTG+AGG | - | chr6.3:3761408-3761427 | None:intergenic | 45.0% | |
CAAAGCGACAGAAGAGATAG+AGG | + | chr6.3:3761683-3761702 | MS.gene20652:CDS | 45.0% | |
CAAATATAGAAGGCTCCCAC+CGG | + | chr6.3:3761005-3761024 | MS.gene20652:intron | 45.0% | |
CAGATGTTCATCTCAGGTTC+TGG | + | chr6.3:3758796-3758815 | MS.gene20652:intron | 45.0% | |
CAGTTCCAAATGCAAGTGCT+TGG | + | chr6.3:3760274-3760293 | MS.gene20652:CDS | 45.0% | |
CCCCTTTAAGCGAATTAACC+AGG | - | chr6.3:3760841-3760860 | None:intergenic | 45.0% | |
CGAATTAACCAGGCACAAAC+TGG | - | chr6.3:3760831-3760850 | None:intergenic | 45.0% | |
CTGACTGAAACAATCTTCGG+TGG | + | chr6.3:3758604-3758623 | MS.gene20652:intron | 45.0% | |
GATGTTCATCTCAGGTTCTG+GGG | + | chr6.3:3758798-3758817 | MS.gene20652:intron | 45.0% | |
GCTAGCATGAAAGTGAAAGC+AGG | - | chr6.3:3758881-3758900 | None:intergenic | 45.0% | |
GGAGGGATTGAGTGCTTATT+AGG | - | chr6.3:3759187-3759206 | None:intergenic | 45.0% | |
TACCTAATAGGTACCCCCAT+TGG | - | chr6.3:3759377-3759396 | None:intergenic | 45.0% | |
TCATGCTAGCTGTCACATTC+AGG | + | chr6.3:3758891-3758910 | MS.gene20652:CDS | 45.0% | |
TGGTAAAGACACCACCATTG+GGG | + | chr6.3:3759409-3759428 | MS.gene20652:intron | 45.0% | |
TGTACTAAGACCATCCCCAA+TGG | - | chr6.3:3759426-3759445 | None:intergenic | 45.0% | |
TTCAAAGCAGCCACACTTCA+AGG | + | chr6.3:3757858-3757877 | MS.gene20652:CDS | 45.0% | |
! | AGAGGAAGATGTTGGTTGTC+TGG | + | chr6.3:3761701-3761720 | MS.gene20652:CDS | 45.0% |
! | AGAGGTGCATTCTCTGTAGA+TGG | - | chr6.3:3761732-3761751 | None:intergenic | 45.0% |
! | GCTAGTTAGAGCATCCACAA+TGG | + | chr6.3:3759087-3759106 | MS.gene20652:intron | 45.0% |
! | GGCTTAGGTGTTATGTTCCT+TGG | + | chr6.3:3760909-3760928 | MS.gene20652:CDS | 45.0% |
!! | AACTGGCTTTCTCAAGTCAG+TGG | + | chr6.3:3759642-3759661 | MS.gene20652:CDS | 45.0% |
!! | ACTGACTTGAGAAAGCCAGT+TGG | - | chr6.3:3759643-3759662 | None:intergenic | 45.0% |
!! | ATGGGGGTACCTATTAGGTA+CGG | + | chr6.3:3759377-3759396 | MS.gene20652:intron | 45.0% |
!! | ATTCTTGGTTCGGTCCAGAA+AGG | + | chr6.3:3761075-3761094 | MS.gene20652:intron | 45.0% |
!! | TCTCAGGTTCTGGGGTATAT+TGG | + | chr6.3:3758806-3758825 | MS.gene20652:CDS | 45.0% |
!!! | TAATAAAATATTCTTTTTTT+AGG | - | chr6.3:3759035-3759054 | None:intergenic | 5.0% |
AAAGACACCACCATTGGGGA+TGG | + | chr6.3:3759413-3759432 | MS.gene20652:intron | 50.0% | |
ACTAAGACCATCCCCAATGG+TGG | - | chr6.3:3759423-3759442 | None:intergenic | 50.0% | |
CCTAATAGGTACCCCCATTG+GGG | - | chr6.3:3759375-3759394 | None:intergenic | 50.0% | |
GGGGGTCTTAAATAAGACCC+CGG | + | chr6.3:3759322-3759341 | MS.gene20652:intron | 50.0% | |
GGGGTCTTAAATAAGACCCC+GGG | + | chr6.3:3759323-3759342 | MS.gene20652:intron | 50.0% | |
TAACCGAACCTCAGCTCTGT+TGG | + | chr6.3:3761397-3761416 | MS.gene20652:intron | 50.0% | |
TAGGCATTCCAGTTTGTGCC+TGG | + | chr6.3:3760820-3760839 | MS.gene20652:CDS | 50.0% | |
TCACCAACAGAGCTGAGGTT+CGG | - | chr6.3:3761403-3761422 | None:intergenic | 50.0% | |
TTTGGGGGTCTCTTAAGACC+CGG | - | chr6.3:3759344-3759363 | None:intergenic | 50.0% | |
! | TGCGGGTCCCGTTTAAAGTT+GGG | + | chr6.3:3759302-3759321 | MS.gene20652:intron | 50.0% |
! | TGTGTGAGATCTGGGTTGGA+GGG | - | chr6.3:3759204-3759223 | None:intergenic | 50.0% |
! | TTGTGTGAGATCTGGGTTGG+AGG | - | chr6.3:3759205-3759224 | None:intergenic | 50.0% |
TTGGGGGTCTCTTAAGACCC+GGG | - | chr6.3:3759343-3759362 | None:intergenic | 55.0% | |
! | CGGGTCCCGTTTAAAGTTGG+GGG | + | chr6.3:3759304-3759323 | MS.gene20652:intron | 55.0% |
! | GCGGGTCCCGTTTAAAGTTG+GGG | + | chr6.3:3759303-3759322 | MS.gene20652:intron | 55.0% |
! | GTGCGGGTCCCGTTTAAAGT+TGG | + | chr6.3:3759301-3759320 | MS.gene20652:intron | 55.0% |
!! | CCCCAATGGGGGTACCTATT+AGG | + | chr6.3:3759372-3759391 | MS.gene20652:intron | 55.0% |
!! | GCAAGTGCTGAAGCCAGTGT+TGG | - | chr6.3:3758848-3758867 | None:intergenic | 55.0% |
TGGGGGTCTCTTAAGACCCG+GGG | - | chr6.3:3759342-3759361 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 3757768 | 3761806 | 3757768 | ID=MS.gene20652 |
chr6.3 | mRNA | 3757768 | 3761806 | 3757768 | ID=MS.gene20652.t1;Parent=MS.gene20652 |
chr6.3 | exon | 3757768 | 3757967 | 3757768 | ID=MS.gene20652.t1.exon1;Parent=MS.gene20652.t1 |
chr6.3 | CDS | 3757768 | 3757967 | 3757768 | ID=cds.MS.gene20652.t1;Parent=MS.gene20652.t1 |
chr6.3 | exon | 3758118 | 3758183 | 3758118 | ID=MS.gene20652.t1.exon2;Parent=MS.gene20652.t1 |
chr6.3 | CDS | 3758118 | 3758183 | 3758118 | ID=cds.MS.gene20652.t1;Parent=MS.gene20652.t1 |
chr6.3 | exon | 3758799 | 3758912 | 3758799 | ID=MS.gene20652.t1.exon3;Parent=MS.gene20652.t1 |
chr6.3 | CDS | 3758799 | 3758912 | 3758799 | ID=cds.MS.gene20652.t1;Parent=MS.gene20652.t1 |
chr6.3 | exon | 3759507 | 3759738 | 3759507 | ID=MS.gene20652.t1.exon4;Parent=MS.gene20652.t1 |
chr6.3 | CDS | 3759507 | 3759738 | 3759507 | ID=cds.MS.gene20652.t1;Parent=MS.gene20652.t1 |
chr6.3 | exon | 3760180 | 3760338 | 3760180 | ID=MS.gene20652.t1.exon5;Parent=MS.gene20652.t1 |
chr6.3 | CDS | 3760180 | 3760338 | 3760180 | ID=cds.MS.gene20652.t1;Parent=MS.gene20652.t1 |
chr6.3 | exon | 3760801 | 3760952 | 3760801 | ID=MS.gene20652.t1.exon6;Parent=MS.gene20652.t1 |
chr6.3 | CDS | 3760801 | 3760952 | 3760801 | ID=cds.MS.gene20652.t1;Parent=MS.gene20652.t1 |
chr6.3 | exon | 3761632 | 3761806 | 3761632 | ID=MS.gene20652.t1.exon7;Parent=MS.gene20652.t1 |
chr6.3 | CDS | 3761632 | 3761806 | 3761632 | ID=cds.MS.gene20652.t1;Parent=MS.gene20652.t1 |
Gene Sequence |
Protein sequence |