Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22293.t1 | XP_003610972.1 | 99.2 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 6.60E-264 | 919.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22293.t1 | Q9LPR8 | 65.3 | 487 | 158 | 7 | 1 | 481 | 1 | 482 | 2.6e-176 | 619.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22293.t1 | G7K9A5 | 99.2 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 4.8e-264 | 919.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene22293.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene22293 | 0.822343 | 2.49E-53 | -1.69E-46 |
| MS.gene050605 | MS.gene22293 | 0.863961 | 1.71E-64 | -1.69E-46 |
| MS.gene051198 | MS.gene22293 | 0.826693 | 2.36E-54 | -1.69E-46 |
| MS.gene051368 | MS.gene22293 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene051926 | MS.gene22293 | -0.804349 | 2.25E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene22293 | 0.820567 | 6.41E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene22293 | 0.805077 | 1.59E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene22293 | 0.817033 | 4.07E-52 | -1.69E-46 |
| MS.gene054559 | MS.gene22293 | 0.809982 | 1.45E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene22293 | 0.809081 | 2.26E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene22293 | 0.817708 | 2.87E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene22293 | 0.839214 | 1.81E-57 | -1.69E-46 |
| MS.gene05979 | MS.gene22293 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene22293 | 0.823905 | 1.08E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene22293 | 0.820546 | 6.48E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene22293 | 0.811767 | 5.94E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22293.t1 | MTR_5g009080 | 99.168 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 0.0 | 988 |
| MS.gene22293.t1 | MTR_4g076140 | 75.783 | 479 | 108 | 6 | 4 | 481 | 1 | 472 | 0.0 | 741 |
| MS.gene22293.t1 | MTR_3g022830 | 54.139 | 447 | 193 | 5 | 34 | 480 | 4 | 438 | 5.56e-170 | 486 |
| MS.gene22293.t1 | MTR_7g027190 | 34.658 | 453 | 209 | 7 | 45 | 478 | 289 | 673 | 6.19e-83 | 270 |
| MS.gene22293.t1 | MTR_1g106590 | 88.983 | 118 | 13 | 0 | 50 | 167 | 124 | 241 | 1.19e-66 | 218 |
| MS.gene22293.t1 | MTR_1g106590 | 89.691 | 97 | 10 | 0 | 286 | 382 | 244 | 340 | 1.86e-38 | 143 |
| MS.gene22293.t1 | MTR_8g442410 | 30.682 | 440 | 235 | 10 | 49 | 479 | 148 | 526 | 1.49e-60 | 207 |
| MS.gene22293.t1 | MTR_5g097480 | 30.254 | 433 | 233 | 8 | 53 | 478 | 174 | 544 | 2.33e-59 | 204 |
| MS.gene22293.t1 | MTR_4g102790 | 27.790 | 439 | 245 | 8 | 49 | 477 | 285 | 661 | 2.70e-56 | 199 |
| MS.gene22293.t1 | MTR_1g029420 | 28.605 | 430 | 240 | 7 | 55 | 478 | 224 | 592 | 1.01e-53 | 190 |
| MS.gene22293.t1 | MTR_3g089055 | 28.302 | 424 | 249 | 6 | 55 | 478 | 202 | 570 | 5.61e-52 | 185 |
| MS.gene22293.t1 | MTR_3g089055 | 28.302 | 424 | 249 | 6 | 55 | 478 | 197 | 565 | 7.45e-52 | 184 |
| MS.gene22293.t1 | MTR_4g064160 | 28.009 | 432 | 237 | 7 | 56 | 477 | 316 | 683 | 8.16e-47 | 172 |
| MS.gene22293.t1 | MTR_4g064120 | 25.959 | 443 | 260 | 6 | 42 | 475 | 240 | 623 | 7.33e-46 | 169 |
| MS.gene22293.t1 | MTR_4g064150 | 27.189 | 434 | 248 | 7 | 53 | 477 | 358 | 732 | 1.20e-45 | 170 |
| MS.gene22293.t1 | MTR_4g104020 | 28.409 | 440 | 244 | 13 | 50 | 479 | 143 | 521 | 1.52e-45 | 166 |
| MS.gene22293.t1 | MTR_4g064200 | 26.620 | 432 | 247 | 7 | 53 | 477 | 281 | 649 | 3.20e-45 | 167 |
| MS.gene22293.t1 | MTR_3g022580 | 41.872 | 203 | 77 | 4 | 279 | 481 | 25 | 186 | 3.58e-45 | 156 |
| MS.gene22293.t1 | MTR_4g064180 | 25.734 | 443 | 261 | 7 | 42 | 475 | 240 | 623 | 3.73e-43 | 161 |
| MS.gene22293.t1 | MTR_1g069725 | 29.062 | 437 | 234 | 12 | 48 | 480 | 101 | 465 | 8.90e-43 | 158 |
| MS.gene22293.t1 | MTR_2g097310 | 26.531 | 441 | 258 | 9 | 42 | 477 | 258 | 637 | 2.52e-42 | 159 |
| MS.gene22293.t1 | MTR_4g133660 | 26.512 | 430 | 246 | 10 | 56 | 477 | 175 | 542 | 3.53e-42 | 157 |
| MS.gene22293.t1 | MTR_7g062120 | 27.021 | 433 | 242 | 8 | 56 | 478 | 372 | 740 | 4.41e-42 | 159 |
| MS.gene22293.t1 | MTR_2g097390 | 25.792 | 442 | 262 | 9 | 41 | 477 | 260 | 640 | 4.69e-41 | 155 |
| MS.gene22293.t1 | MTR_7g074650 | 41.146 | 192 | 108 | 2 | 60 | 249 | 442 | 630 | 2.87e-39 | 152 |
| MS.gene22293.t1 | MTR_7g074650 | 38.255 | 149 | 87 | 3 | 333 | 478 | 646 | 792 | 3.19e-23 | 103 |
| MS.gene22293.t1 | MTR_2g097350 | 25.850 | 441 | 261 | 9 | 42 | 477 | 260 | 639 | 3.14e-39 | 150 |
| MS.gene22293.t1 | MTR_2g034260 | 26.030 | 461 | 260 | 12 | 33 | 478 | 190 | 584 | 8.41e-38 | 146 |
| MS.gene22293.t1 | MTR_2g034280 | 26.840 | 462 | 257 | 11 | 33 | 478 | 179 | 575 | 3.14e-37 | 144 |
| MS.gene22293.t1 | MTR_3g065980 | 34.685 | 222 | 131 | 3 | 44 | 260 | 160 | 372 | 2.70e-36 | 141 |
| MS.gene22293.t1 | MTR_3g065980 | 37.576 | 165 | 90 | 3 | 327 | 478 | 376 | 540 | 7.39e-30 | 122 |
| MS.gene22293.t1 | MTR_2g097463 | 27.166 | 427 | 250 | 10 | 53 | 477 | 287 | 654 | 1.34e-34 | 137 |
| MS.gene22293.t1 | MTR_2g097380 | 24.700 | 417 | 223 | 9 | 64 | 477 | 232 | 560 | 2.19e-34 | 136 |
| MS.gene22293.t1 | MTR_2g089100 | 24.943 | 441 | 274 | 9 | 50 | 477 | 46 | 442 | 7.05e-34 | 133 |
| MS.gene22293.t1 | MTR_2g082090 | 35.238 | 210 | 129 | 2 | 53 | 256 | 209 | 417 | 1.20e-31 | 128 |
| MS.gene22293.t1 | MTR_2g082090 | 41.611 | 149 | 86 | 1 | 329 | 477 | 431 | 578 | 3.05e-29 | 121 |
| MS.gene22293.t1 | MTR_5g058860 | 26.096 | 456 | 255 | 11 | 41 | 477 | 104 | 496 | 2.17e-31 | 127 |
| MS.gene22293.t1 | MTR_3g022005 | 54.082 | 98 | 44 | 1 | 384 | 481 | 32 | 128 | 2.54e-31 | 117 |
| MS.gene22293.t1 | MTR_4g077760 | 25.688 | 436 | 244 | 12 | 53 | 478 | 190 | 555 | 3.47e-29 | 120 |
| MS.gene22293.t1 | MTR_5g094450 | 28.972 | 214 | 144 | 3 | 53 | 258 | 158 | 371 | 3.64e-29 | 120 |
| MS.gene22293.t1 | MTR_5g094450 | 36.879 | 141 | 88 | 1 | 338 | 478 | 393 | 532 | 7.80e-24 | 104 |
| MS.gene22293.t1 | MTR_3g027430 | 48.305 | 118 | 40 | 1 | 139 | 256 | 184 | 280 | 1.68e-28 | 115 |
| MS.gene22293.t1 | MTR_2g097410 | 29.048 | 210 | 142 | 2 | 56 | 258 | 371 | 580 | 2.12e-26 | 113 |
| MS.gene22293.t1 | MTR_2g097410 | 28.188 | 149 | 107 | 0 | 329 | 477 | 592 | 740 | 2.44e-18 | 88.6 |
| MS.gene22293.t1 | MTR_3g056110 | 28.302 | 212 | 145 | 2 | 53 | 258 | 172 | 382 | 3.00e-26 | 112 |
| MS.gene22293.t1 | MTR_3g056110 | 36.170 | 141 | 89 | 1 | 338 | 478 | 403 | 542 | 3.31e-25 | 108 |
| MS.gene22293.t1 | MTR_1g086970 | 25.702 | 463 | 256 | 17 | 36 | 478 | 84 | 478 | 3.38e-26 | 111 |
| MS.gene22293.t1 | MTR_2g026250 | 30.317 | 221 | 137 | 5 | 57 | 267 | 229 | 442 | 7.35e-26 | 111 |
| MS.gene22293.t1 | MTR_2g026250 | 34.507 | 142 | 92 | 1 | 338 | 479 | 457 | 597 | 8.01e-21 | 95.9 |
| MS.gene22293.t1 | MTR_7g109580 | 25.877 | 456 | 256 | 13 | 36 | 478 | 168 | 554 | 1.92e-25 | 109 |
| MS.gene22293.t1 | MTR_5g015950 | 24.658 | 438 | 287 | 11 | 56 | 477 | 35 | 445 | 1.99e-25 | 108 |
| MS.gene22293.t1 | MTR_3g053270 | 24.658 | 438 | 287 | 11 | 56 | 477 | 35 | 445 | 1.99e-25 | 108 |
| MS.gene22293.t1 | MTR_4g095500 | 23.729 | 472 | 285 | 12 | 38 | 477 | 39 | 467 | 2.68e-25 | 108 |
| MS.gene22293.t1 | MTR_4g097080 | 29.091 | 220 | 132 | 4 | 55 | 258 | 132 | 343 | 5.70e-25 | 108 |
| MS.gene22293.t1 | MTR_4g097080 | 30.247 | 162 | 106 | 4 | 322 | 478 | 344 | 503 | 2.17e-13 | 72.8 |
| MS.gene22293.t1 | MTR_2g097467 | 31.100 | 209 | 134 | 2 | 56 | 258 | 289 | 493 | 7.44e-25 | 108 |
| MS.gene22293.t1 | MTR_2g097467 | 30.201 | 149 | 104 | 0 | 329 | 477 | 505 | 653 | 1.23e-17 | 86.3 |
| MS.gene22293.t1 | MTR_2g097473 | 31.100 | 209 | 134 | 2 | 56 | 258 | 289 | 493 | 1.69e-24 | 107 |
| MS.gene22293.t1 | MTR_2g097473 | 29.530 | 149 | 105 | 0 | 329 | 477 | 505 | 653 | 2.44e-16 | 82.4 |
| MS.gene22293.t1 | MTR_7g057230 | 27.586 | 348 | 176 | 10 | 141 | 477 | 374 | 656 | 8.50e-24 | 105 |
| MS.gene22293.t1 | MTR_5g015490 | 29.493 | 217 | 145 | 3 | 50 | 258 | 108 | 324 | 1.16e-23 | 103 |
| MS.gene22293.t1 | MTR_5g015490 | 29.032 | 155 | 103 | 4 | 329 | 478 | 338 | 490 | 4.95e-11 | 65.1 |
| MS.gene22293.t1 | MTR_4g076020 | 26.966 | 267 | 160 | 6 | 60 | 304 | 88 | 341 | 8.54e-23 | 100 |
| MS.gene22293.t1 | MTR_4g076020 | 39.456 | 147 | 87 | 2 | 332 | 478 | 285 | 429 | 3.63e-21 | 96.3 |
| MS.gene22293.t1 | MTR_2g034250 | 33.974 | 156 | 94 | 3 | 328 | 478 | 434 | 585 | 3.31e-22 | 100 |
| MS.gene22293.t1 | MTR_2g034250 | 29.032 | 248 | 160 | 6 | 33 | 264 | 186 | 433 | 6.01e-20 | 93.2 |
| MS.gene22293.t1 | MTR_3g021320 | 38.158 | 152 | 64 | 3 | 156 | 307 | 1 | 122 | 1.04e-20 | 88.2 |
| MS.gene22293.t1 | MTR_2g099110 | 26.512 | 215 | 148 | 4 | 47 | 252 | 65 | 278 | 1.49e-20 | 94.4 |
| MS.gene22293.t1 | MTR_1g096030 | 28.205 | 273 | 158 | 9 | 47 | 288 | 71 | 336 | 2.86e-20 | 93.6 |
| MS.gene22293.t1 | MTR_1g096030 | 29.143 | 175 | 106 | 4 | 323 | 479 | 286 | 460 | 7.48e-19 | 89.4 |
| MS.gene22293.t1 | MTR_4g026485 | 22.897 | 428 | 253 | 11 | 57 | 479 | 270 | 625 | 8.57e-20 | 92.8 |
| MS.gene22293.t1 | MTR_6g047750 | 23.570 | 437 | 249 | 12 | 57 | 478 | 296 | 662 | 1.48e-19 | 92.4 |
| MS.gene22293.t1 | MTR_3g072710 | 28.163 | 245 | 136 | 8 | 41 | 255 | 105 | 339 | 2.82e-18 | 87.8 |
| MS.gene22293.t1 | MTR_3g072710 | 31.707 | 164 | 98 | 5 | 321 | 477 | 343 | 499 | 1.05e-13 | 73.6 |
| MS.gene22293.t1 | MTR_8g093070 | 27.536 | 207 | 136 | 8 | 53 | 254 | 136 | 333 | 5.59e-14 | 74.3 |
| MS.gene22293.t1 | MTR_0092s0100 | 30.303 | 165 | 113 | 1 | 33 | 197 | 349 | 511 | 5.49e-13 | 71.6 |
| MS.gene22293.t1 | MTR_0092s0100 | 30.303 | 165 | 113 | 1 | 33 | 197 | 352 | 514 | 5.85e-13 | 71.6 |
| MS.gene22293.t1 | MTR_8g020840 | 23.409 | 440 | 245 | 16 | 50 | 466 | 165 | 535 | 6.44e-13 | 71.2 |
| MS.gene22293.t1 | MTR_3g025340 | 49.180 | 61 | 31 | 0 | 114 | 174 | 9 | 69 | 8.89e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22293.t1 | AT1G50420 | 65.914 | 487 | 155 | 7 | 1 | 481 | 1 | 482 | 0.0 | 650 |
| MS.gene22293.t1 | AT3G54220 | 33.484 | 442 | 217 | 10 | 45 | 480 | 282 | 652 | 2.92e-62 | 214 |
| MS.gene22293.t1 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 131 | 526 | 5.54e-55 | 192 |
| MS.gene22293.t1 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 206 | 601 | 1.72e-54 | 192 |
| MS.gene22293.t1 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 202 | 597 | 1.90e-54 | 192 |
| MS.gene22293.t1 | AT1G21450 | 29.002 | 431 | 238 | 5 | 55 | 478 | 224 | 593 | 4.60e-54 | 191 |
| MS.gene22293.t1 | AT4G17230 | 26.174 | 447 | 261 | 7 | 39 | 478 | 141 | 525 | 2.72e-46 | 169 |
| MS.gene22293.t1 | AT4G17230 | 26.174 | 447 | 261 | 7 | 39 | 478 | 141 | 525 | 2.72e-46 | 169 |
| MS.gene22293.t1 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 9.12e-44 | 162 |
| MS.gene22293.t1 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 9.12e-44 | 162 |
| MS.gene22293.t1 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 308 | 693 | 4.46e-43 | 162 |
| MS.gene22293.t1 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 307 | 692 | 4.47e-43 | 162 |
| MS.gene22293.t1 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 3 | 374 | 3.75e-41 | 151 |
| MS.gene22293.t1 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 179 | 550 | 4.60e-40 | 152 |
| MS.gene22293.t1 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 211 | 582 | 8.42e-40 | 151 |
| MS.gene22293.t1 | AT2G29065 | 25.513 | 439 | 247 | 10 | 56 | 477 | 252 | 627 | 7.49e-39 | 149 |
| MS.gene22293.t1 | AT1G55580 | 26.271 | 472 | 237 | 11 | 52 | 478 | 40 | 445 | 7.15e-38 | 144 |
| MS.gene22293.t1 | AT1G66350 | 35.616 | 219 | 132 | 4 | 44 | 260 | 143 | 354 | 2.99e-36 | 140 |
| MS.gene22293.t1 | AT1G66350 | 37.179 | 156 | 93 | 2 | 327 | 481 | 358 | 509 | 4.58e-31 | 125 |
| MS.gene22293.t1 | AT1G14920 | 33.333 | 273 | 147 | 7 | 44 | 288 | 160 | 425 | 9.33e-35 | 137 |
| MS.gene22293.t1 | AT1G14920 | 34.868 | 152 | 95 | 2 | 328 | 478 | 381 | 529 | 9.13e-27 | 113 |
| MS.gene22293.t1 | AT2G01570 | 35.683 | 227 | 126 | 5 | 44 | 260 | 212 | 428 | 1.84e-34 | 136 |
| MS.gene22293.t1 | AT2G01570 | 37.500 | 152 | 91 | 3 | 328 | 478 | 433 | 581 | 5.09e-27 | 114 |
| MS.gene22293.t1 | AT5G17490 | 34.404 | 218 | 132 | 4 | 47 | 260 | 151 | 361 | 2.42e-34 | 135 |
| MS.gene22293.t1 | AT5G17490 | 38.562 | 153 | 92 | 2 | 327 | 478 | 365 | 516 | 2.04e-27 | 115 |
| MS.gene22293.t1 | AT2G29060 | 24.485 | 437 | 249 | 11 | 56 | 477 | 284 | 654 | 8.15e-34 | 135 |
| MS.gene22293.t1 | AT2G29060 | 24.485 | 437 | 249 | 11 | 56 | 477 | 321 | 691 | 8.38e-34 | 135 |
| MS.gene22293.t1 | AT5G48150 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.73e-33 | 132 |
| MS.gene22293.t1 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.01e-26 | 113 |
| MS.gene22293.t1 | AT5G48150 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.73e-33 | 132 |
| MS.gene22293.t1 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.01e-26 | 113 |
| MS.gene22293.t1 | AT5G48150 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.73e-33 | 132 |
| MS.gene22293.t1 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.01e-26 | 113 |
| MS.gene22293.t1 | AT5G48150 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.73e-33 | 132 |
| MS.gene22293.t1 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.01e-26 | 113 |
| MS.gene22293.t1 | AT5G59450 | 26.376 | 436 | 250 | 12 | 53 | 478 | 224 | 598 | 4.95e-33 | 132 |
| MS.gene22293.t1 | AT3G03450 | 32.287 | 223 | 142 | 4 | 44 | 260 | 171 | 390 | 1.42e-32 | 130 |
| MS.gene22293.t1 | AT3G03450 | 39.355 | 155 | 92 | 2 | 325 | 478 | 392 | 545 | 2.70e-31 | 127 |
| MS.gene22293.t1 | AT1G63100 | 32.110 | 218 | 139 | 3 | 48 | 259 | 244 | 458 | 2.73e-32 | 130 |
| MS.gene22293.t1 | AT1G63100 | 36.196 | 163 | 91 | 3 | 328 | 477 | 466 | 628 | 9.55e-25 | 108 |
| MS.gene22293.t1 | AT1G63100 | 32.110 | 218 | 139 | 3 | 48 | 259 | 269 | 483 | 2.90e-32 | 130 |
| MS.gene22293.t1 | AT1G63100 | 36.196 | 163 | 91 | 3 | 328 | 477 | 491 | 653 | 1.28e-24 | 107 |
| MS.gene22293.t1 | AT5G41920 | 32.020 | 203 | 134 | 3 | 51 | 249 | 38 | 240 | 1.70e-31 | 125 |
| MS.gene22293.t1 | AT5G41920 | 36.774 | 155 | 91 | 3 | 327 | 480 | 254 | 402 | 1.97e-20 | 93.6 |
| MS.gene22293.t1 | AT2G37650 | 24.709 | 429 | 255 | 8 | 56 | 478 | 347 | 713 | 4.64e-31 | 127 |
| MS.gene22293.t1 | AT2G37650 | 24.709 | 429 | 255 | 8 | 56 | 478 | 335 | 701 | 4.85e-31 | 127 |
| MS.gene22293.t1 | AT2G04890 | 33.491 | 212 | 136 | 3 | 56 | 267 | 53 | 259 | 9.79e-31 | 123 |
| MS.gene22293.t1 | AT2G04890 | 40.000 | 150 | 89 | 1 | 329 | 478 | 265 | 413 | 9.30e-28 | 115 |
| MS.gene22293.t1 | AT5G52510 | 25.986 | 431 | 243 | 12 | 61 | 478 | 273 | 640 | 3.59e-29 | 121 |
| MS.gene22293.t1 | AT1G07530 | 29.858 | 211 | 140 | 3 | 56 | 259 | 396 | 605 | 1.06e-27 | 117 |
| MS.gene22293.t1 | AT1G07530 | 28.859 | 149 | 106 | 0 | 329 | 477 | 616 | 764 | 7.55e-18 | 87.0 |
| MS.gene22293.t1 | AT5G66770 | 33.178 | 214 | 130 | 4 | 53 | 259 | 217 | 424 | 1.31e-23 | 104 |
| MS.gene22293.t1 | AT5G66770 | 32.468 | 154 | 101 | 3 | 328 | 478 | 431 | 584 | 1.66e-16 | 82.8 |
| MS.gene22293.t1 | AT4G37650 | 26.432 | 227 | 135 | 4 | 56 | 258 | 146 | 364 | 1.53e-22 | 100 |
| MS.gene22293.t1 | AT4G37650 | 26.415 | 159 | 107 | 3 | 329 | 478 | 372 | 529 | 6.14e-11 | 65.1 |
| MS.gene22293.t1 | AT4G08250 | 29.596 | 223 | 139 | 7 | 47 | 255 | 98 | 316 | 3.02e-20 | 94.0 |
| MS.gene22293.t1 | AT3G50650 | 30.876 | 217 | 133 | 4 | 58 | 267 | 177 | 383 | 5.59e-20 | 93.2 |
| MS.gene22293.t1 | AT3G50650 | 28.859 | 149 | 99 | 3 | 337 | 478 | 394 | 542 | 1.73e-13 | 73.2 |
| MS.gene22293.t1 | AT3G49950 | 27.461 | 193 | 120 | 4 | 52 | 229 | 26 | 213 | 6.59e-13 | 70.9 |
| MS.gene22293.t1 | AT3G49950 | 27.517 | 149 | 101 | 3 | 331 | 477 | 264 | 407 | 2.61e-11 | 65.9 |
Find 92 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATTCTTGTGGAATTTA+AGG | 0.089377 | 5.3:+3164737 | None:intergenic |
| TATGCTTTCTGAAGAAATTA+TGG | 0.230947 | 5.3:-3164715 | MS.gene22293:CDS |
| TTTGAGTTTCTTGACATAAT+AGG | 0.254589 | 5.3:+3164267 | None:intergenic |
| TGCAGCATTGTTTGATTGTT+TGG | 0.259936 | 5.3:-3163977 | MS.gene22293:CDS |
| CAGCTTCTTCAGAAAGCTTA+TGG | 0.264058 | 5.3:+3164457 | None:intergenic |
| TCATCAGCAGAAAGAGGTTT+TGG | 0.271986 | 5.3:-3164490 | MS.gene22293:CDS |
| AACATACCATAATAGCTTAA+AGG | 0.277960 | 5.3:+3163787 | None:intergenic |
| ACAATGCTGCATAAGAATAT+AGG | 0.281076 | 5.3:+3163989 | None:intergenic |
| TCAAGCTATTGTTGAATCTA+TGG | 0.285430 | 5.3:-3164634 | MS.gene22293:CDS |
| TGCTAAGAACAGGGTTGAAT+TGG | 0.312189 | 5.3:+3164415 | None:intergenic |
| CTCAAATGAGGAGGACCTTC+AGG | 0.312197 | 5.3:+3164525 | None:intergenic |
| TTGTGGAATTTAAGGCTCTA+TGG | 0.321651 | 5.3:+3164745 | None:intergenic |
| ATGAACCAAAACACATCATT+AGG | 0.327281 | 5.3:-3164216 | MS.gene22293:CDS |
| ATCTATGGAAGGTGAGAAAA+TGG | 0.335503 | 5.3:-3164619 | MS.gene22293:CDS |
| TCTGCAGTTACATTCCCTTT+TGG | 0.339325 | 5.3:-3164325 | MS.gene22293:CDS |
| AACATCCCTAGAGAGATTAA+AGG | 0.354098 | 5.3:-3163938 | MS.gene22293:CDS |
| AAGCTATTATGGTATGTTGC+AGG | 0.357915 | 5.3:-3163782 | MS.gene22293:CDS |
| AATCACCTAATGATGTGTTT+TGG | 0.364016 | 5.3:+3164211 | None:intergenic |
| TAGTAACTTGCTGGCAAGAT+AGG | 0.366004 | 5.3:-3163696 | MS.gene22293:CDS |
| CAATGCTGCATAAGAATATA+GGG | 0.366018 | 5.3:+3163990 | None:intergenic |
| GACAAACTTCGTGTGAAAAC+CGG | 0.371883 | 5.3:-3164372 | MS.gene22293:CDS |
| AATGTGCCTTTAAGCTATTA+TGG | 0.377946 | 5.3:-3163793 | MS.gene22293:CDS |
| AGACTTGATTCGTGTGGATT+TGG | 0.381293 | 5.3:-3163817 | MS.gene22293:CDS |
| TGTGCAAATCATGTAGCTTC+TGG | 0.411195 | 5.3:-3164903 | MS.gene22293:CDS |
| TCACCTAGCATAGGAGGAAT+AGG | 0.416008 | 5.3:-3165002 | MS.gene22293:CDS |
| TATAGAATGAGAGAAGAAAA+TGG | 0.416830 | 5.3:-3163724 | MS.gene22293:CDS |
| CTGATAGGATACTTAAAACT+TGG | 0.427400 | 5.3:-3164776 | MS.gene22293:CDS |
| AGAAGGTTTCTACAGAGTTA+TGG | 0.432910 | 5.3:-3163757 | MS.gene22293:CDS |
| TCACTGAAGCACTTGCTGAT+AGG | 0.433040 | 5.3:-3164791 | MS.gene22293:CDS |
| ATGGTTGTGTAGTAACTTGC+TGG | 0.448692 | 5.3:-3163705 | MS.gene22293:CDS |
| TCGGTTACAACCATGACTTT+TGG | 0.460163 | 5.3:+3164063 | None:intergenic |
| TCACAACGGTTCAACATTGA+TGG | 0.461983 | 5.3:-3164028 | MS.gene22293:CDS |
| TTGCACAAGTGATTAACAAA+TGG | 0.462673 | 5.3:+3164919 | None:intergenic |
| CAACAACAGCTTGGAGAGCT+AGG | 0.464849 | 5.3:-3163663 | MS.gene22293:CDS |
| TCTCAACCTTTAATCTCTCT+AGG | 0.466126 | 5.3:+3163932 | None:intergenic |
| ATTCATCATCCAAGGCCAAA+AGG | 0.470579 | 5.3:+3164310 | None:intergenic |
| GATGATGTTGAATCGGGACT+TGG | 0.470973 | 5.3:+3164156 | None:intergenic |
| GTTGTGATTCGAGTCCTGTT+CGG | 0.477667 | 5.3:+3164044 | None:intergenic |
| GAATCTATGTTACAAGAAGA+AGG | 0.480629 | 5.3:-3165077 | MS.gene22293:CDS |
| AGAATTGAAATCTGAGGAAA+GGG | 0.483022 | 5.3:-3164955 | MS.gene22293:CDS |
| ATATATGCCACCTTCAAGAA+AGG | 0.483743 | 5.3:+3164666 | None:intergenic |
| ATTATGTCAAGAAACTCAAA+TGG | 0.483850 | 5.3:-3164264 | MS.gene22293:CDS |
| CCTCCTCATTTGAGAATCAC+AGG | 0.490720 | 5.3:-3164516 | MS.gene22293:CDS |
| AAGGTTGAGAAGATGCTGTT+TGG | 0.498109 | 5.3:-3163919 | MS.gene22293:CDS |
| AGAAAGCATAATAATTCTTG+TGG | 0.500494 | 5.3:+3164728 | None:intergenic |
| CTCTGCATAGTGTCTCCATC+AGG | 0.502156 | 5.3:+3164828 | None:intergenic |
| AGTCATGGTTGTAACCGAAC+AGG | 0.503090 | 5.3:-3164058 | MS.gene22293:CDS |
| CGACGATGATGATGTTGAAT+CGG | 0.503259 | 5.3:+3164149 | None:intergenic |
| GCTAGGTGAAACTGACATCA+TGG | 0.505670 | 5.3:+3165016 | None:intergenic |
| GAGAATTGAAATCTGAGGAA+AGG | 0.506938 | 5.3:-3164956 | MS.gene22293:CDS |
| TCTCTACTAAGCCATGGATA+AGG | 0.507017 | 5.3:+3164975 | None:intergenic |
| AGGATACTTAAAACTTGGCC+TGG | 0.515401 | 5.3:-3164771 | MS.gene22293:CDS |
| CTACAGAGTTATGGTTGTGA+GGG | 0.516522 | 5.3:-3163748 | MS.gene22293:CDS |
| TCACAGCTTGCAACTCCTGA+TGG | 0.516747 | 5.3:-3164843 | MS.gene22293:CDS |
| TTCATCATCCAAGGCCAAAA+GGG | 0.519127 | 5.3:+3164311 | None:intergenic |
| TTCAATTCTCTACTAAGCCA+TGG | 0.520245 | 5.3:+3164969 | None:intergenic |
| CTCAACCTTTAATCTCTCTA+GGG | 0.522051 | 5.3:+3163933 | None:intergenic |
| TATATGCCACCTTCAAGAAA+GGG | 0.525767 | 5.3:+3164667 | None:intergenic |
| TTGTGAAGGAGCTGAAAGAA+AGG | 0.532875 | 5.3:-3163872 | MS.gene22293:CDS |
| AAAAGAGCAATCCATTGTGC+AGG | 0.535750 | 5.3:+3164567 | None:intergenic |
| AGGGATTCATCAGCAGAAAG+AGG | 0.542783 | 5.3:-3164496 | MS.gene22293:CDS |
| TTCATCTGCTTCAATGAATG+TGG | 0.545313 | 5.3:-3164118 | MS.gene22293:CDS |
| TTTAAGGCTCTATGGAGTCC+AGG | 0.546774 | 5.3:+3164753 | None:intergenic |
| ACTAATTGCAAGCGCCTCGC+CGG | 0.552940 | 5.3:+3164353 | None:intergenic |
| GACGATGATGATGTTGAATC+GGG | 0.555408 | 5.3:+3164150 | None:intergenic |
| ATGGTATGTTGCAGGCAAGA+AGG | 0.557823 | 5.3:-3163774 | MS.gene22293:CDS |
| GATCCTATTCCTCCTATGCT+AGG | 0.562234 | 5.3:+3164999 | None:intergenic |
| TCAGTTTCACCTAGCATAGG+AGG | 0.562988 | 5.3:-3165008 | MS.gene22293:CDS |
| AGAACAGGGTTGAATTGGAA+TGG | 0.565131 | 5.3:+3164420 | None:intergenic |
| TCTACAGAGTTATGGTTGTG+AGG | 0.567967 | 5.3:-3163749 | MS.gene22293:CDS |
| ATTGAAGCAGATGAAGATGC+TGG | 0.572949 | 5.3:+3164126 | None:intergenic |
| GAGTTTGTCACCAAAAGTCA+TGG | 0.575658 | 5.3:-3164073 | MS.gene22293:CDS |
| AAGAACATAATTGCTTGTGA+AGG | 0.580873 | 5.3:-3163886 | MS.gene22293:CDS |
| ATCCCTGTGATTCTCAAATG+AGG | 0.584689 | 5.3:+3164513 | None:intergenic |
| TGAGGATGATTCATCATCCA+AGG | 0.589137 | 5.3:+3164302 | None:intergenic |
| AATCTATGTTACAAGAAGAA+GGG | 0.598643 | 5.3:-3165076 | MS.gene22293:CDS |
| GAATAGGATCACCTTATCCA+TGG | 0.599511 | 5.3:-3164986 | MS.gene22293:CDS |
| GCTATTGTTGAATCTATGGA+AGG | 0.607832 | 5.3:-3164630 | MS.gene22293:CDS |
| TGAGAAGATGCTGTTTGGTG+AGG | 0.611876 | 5.3:-3163914 | MS.gene22293:CDS |
| ATGTCAGTTTCACCTAGCAT+AGG | 0.614550 | 5.3:-3165011 | MS.gene22293:CDS |
| ATCATGGAAAATAACTGTAG+AGG | 0.617197 | 5.3:+3165032 | None:intergenic |
| CTCCTCATTTGAGAATCACA+GGG | 0.617281 | 5.3:-3164515 | MS.gene22293:CDS |
| TTTCTAGCTTGCTAAGAACA+GGG | 0.622441 | 5.3:+3164406 | None:intergenic |
| ACGGTTCAACATTGATGGAG+AGG | 0.639461 | 5.3:-3164023 | MS.gene22293:CDS |
| TAGTAGAGAATTGAAATCTG+AGG | 0.644490 | 5.3:-3164961 | MS.gene22293:CDS |
| TGGATGATGAATCATCCTCA+AGG | 0.648643 | 5.3:-3164299 | MS.gene22293:CDS |
| ATGCTGCTGAACCTGCACAA+TGG | 0.650823 | 5.3:-3164578 | MS.gene22293:CDS |
| GAATTGAAATCTGAGGAAAG+GGG | 0.651416 | 5.3:-3164954 | MS.gene22293:CDS |
| TTTATGAGACTTGATTCGTG+TGG | 0.658284 | 5.3:-3163823 | MS.gene22293:CDS |
| CCTGTGATTCTCAAATGAGG+AGG | 0.663636 | 5.3:+3164516 | None:intergenic |
| ACTTCGTGTGAAAACCGGCG+AGG | 0.733150 | 5.3:-3164367 | MS.gene22293:CDS |
| GAACAGGACTCGAATCACAA+CGG | 0.767714 | 5.3:-3164042 | MS.gene22293:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTCTTGTGGAATTTA+AGG | + | chr5.3:3164003-3164022 | None:intergenic | 20.0% |
| !! | TGATTTACTTGAAAAAGATA+TGG | - | chr5.3:3164544-3164563 | MS.gene22293:CDS | 20.0% |
| ! | AACATACCATAATAGCTTAA+AGG | + | chr5.3:3164953-3164972 | None:intergenic | 25.0% |
| ! | AATCTATGTTACAAGAAGAA+GGG | - | chr5.3:3163661-3163680 | MS.gene22293:CDS | 25.0% |
| ! | ATTATGTCAAGAAACTCAAA+TGG | - | chr5.3:3164473-3164492 | MS.gene22293:CDS | 25.0% |
| ! | CTTGAAAAAGATATGGTTAA+TGG | - | chr5.3:3164551-3164570 | MS.gene22293:CDS | 25.0% |
| ! | GACATGAAAAACTTGATAAA+TGG | - | chr5.3:3164891-3164910 | MS.gene22293:CDS | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | - | chr5.3:3165013-3165032 | MS.gene22293:CDS | 25.0% |
| !! | AGAAAGCATAATAATTCTTG+TGG | + | chr5.3:3164012-3164031 | None:intergenic | 25.0% |
| !! | TATGCTTTCTGAAGAAATTA+TGG | - | chr5.3:3164022-3164041 | MS.gene22293:CDS | 25.0% |
| !! | TTTGAGTTTCTTGACATAAT+AGG | + | chr5.3:3164473-3164492 | None:intergenic | 25.0% |
| AAGAACATAATTGCTTGTGA+AGG | - | chr5.3:3164851-3164870 | MS.gene22293:CDS | 30.0% | |
| AATGTGCCTTTAAGCTATTA+TGG | - | chr5.3:3164944-3164963 | MS.gene22293:CDS | 30.0% | |
| ACAATGCTGCATAAGAATAT+AGG | + | chr5.3:3164751-3164770 | None:intergenic | 30.0% | |
| AGAATTGAAATCTGAGGAAA+GGG | - | chr5.3:3163782-3163801 | MS.gene22293:CDS | 30.0% | |
| ATCATGGAAAATAACTGTAG+AGG | + | chr5.3:3163708-3163727 | None:intergenic | 30.0% | |
| ATGAACCAAAACACATCATT+AGG | - | chr5.3:3164521-3164540 | MS.gene22293:CDS | 30.0% | |
| CAATGCTGCATAAGAATATA+GGG | + | chr5.3:3164750-3164769 | None:intergenic | 30.0% | |
| CTGATAGGATACTTAAAACT+TGG | - | chr5.3:3163961-3163980 | MS.gene22293:CDS | 30.0% | |
| GAATCTATGTTACAAGAAGA+AGG | - | chr5.3:3163660-3163679 | MS.gene22293:CDS | 30.0% | |
| TAGTAGAGAATTGAAATCTG+AGG | - | chr5.3:3163776-3163795 | MS.gene22293:CDS | 30.0% | |
| TCAAGCTATTGTTGAATCTA+TGG | - | chr5.3:3164103-3164122 | MS.gene22293:CDS | 30.0% | |
| TTGCACAAGTGATTAACAAA+TGG | + | chr5.3:3163821-3163840 | None:intergenic | 30.0% | |
| ! | AATCACCTAATGATGTGTTT+TGG | + | chr5.3:3164529-3164548 | None:intergenic | 30.0% |
| ! | AGAGTTTTCTCAATGCTTTA+TGG | - | chr5.3:3164642-3164661 | MS.gene22293:CDS | 30.0% |
| !!! | TGTGTTTTGGTTCATAAACA+TGG | + | chr5.3:3164516-3164535 | None:intergenic | 30.0% |
| AACATCCCTAGAGAGATTAA+AGG | - | chr5.3:3164799-3164818 | MS.gene22293:CDS | 35.0% | |
| AAGCTATTATGGTATGTTGC+AGG | - | chr5.3:3164955-3164974 | MS.gene22293:CDS | 35.0% | |
| AGAAGGTTTCTACAGAGTTA+TGG | - | chr5.3:3164980-3164999 | MS.gene22293:CDS | 35.0% | |
| ATATATGCCACCTTCAAGAA+AGG | + | chr5.3:3164074-3164093 | None:intergenic | 35.0% | |
| ATCTATGGAAGGTGAGAAAA+TGG | - | chr5.3:3164118-3164137 | MS.gene22293:CDS | 35.0% | |
| CTCAACCTTTAATCTCTCTA+GGG | + | chr5.3:3164807-3164826 | None:intergenic | 35.0% | |
| GAATTGAAATCTGAGGAAAG+GGG | - | chr5.3:3163783-3163802 | MS.gene22293:CDS | 35.0% | |
| GAGAATTGAAATCTGAGGAA+AGG | - | chr5.3:3163781-3163800 | MS.gene22293:CDS | 35.0% | |
| GCTATTGTTGAATCTATGGA+AGG | - | chr5.3:3164107-3164126 | MS.gene22293:CDS | 35.0% | |
| TATATGCCACCTTCAAGAAA+GGG | + | chr5.3:3164073-3164092 | None:intergenic | 35.0% | |
| TCTCAACCTTTAATCTCTCT+AGG | + | chr5.3:3164808-3164827 | None:intergenic | 35.0% | |
| TGCAGCATTGTTTGATTGTT+TGG | - | chr5.3:3164760-3164779 | MS.gene22293:CDS | 35.0% | |
| TTCAATTCTCTACTAAGCCA+TGG | + | chr5.3:3163771-3163790 | None:intergenic | 35.0% | |
| TTCATCTGCTTCAATGAATG+TGG | - | chr5.3:3164619-3164638 | MS.gene22293:CDS | 35.0% | |
| ! | AATAGGAGTTTTTCTCCTTG+AGG | + | chr5.3:3164456-3164475 | None:intergenic | 35.0% |
| ! | TCATAAACATGGCTTTTTGC+AGG | + | chr5.3:3164505-3164524 | None:intergenic | 35.0% |
| ! | TTGTGGAATTTAAGGCTCTA+TGG | + | chr5.3:3163995-3164014 | None:intergenic | 35.0% |
| ! | TTTATGAGACTTGATTCGTG+TGG | - | chr5.3:3164914-3164933 | MS.gene22293:CDS | 35.0% |
| !! | TTTCTAGCTTGCTAAGAACA+GGG | + | chr5.3:3164334-3164353 | None:intergenic | 35.0% |
| !!! | AAAGAGGTTTTGGAGCAAAT+GGG | - | chr5.3:3164257-3164276 | MS.gene22293:CDS | 35.0% |
| !!! | CTTTGTTTTCAACAACAGCT+TGG | - | chr5.3:3165065-3165084 | MS.gene22293:CDS | 35.0% |
| !!! | TTTTCTAGCTTGCTAAGAAC+AGG | + | chr5.3:3164335-3164354 | None:intergenic | 35.0% |
| AAAAGAGCAATCCATTGTGC+AGG | + | chr5.3:3164173-3164192 | None:intergenic | 40.0% | |
| AAGGTTGAGAAGATGCTGTT+TGG | - | chr5.3:3164818-3164837 | MS.gene22293:CDS | 40.0% | |
| AGAACAGGGTTGAATTGGAA+TGG | + | chr5.3:3164320-3164339 | None:intergenic | 40.0% | |
| AGGATACTTAAAACTTGGCC+TGG | - | chr5.3:3163966-3163985 | MS.gene22293:CDS | 40.0% | |
| ATCCCTGTGATTCTCAAATG+AGG | + | chr5.3:3164227-3164246 | None:intergenic | 40.0% | |
| ATGTCAGTTTCACCTAGCAT+AGG | - | chr5.3:3163726-3163745 | MS.gene22293:CDS | 40.0% | |
| ATTCATCATCCAAGGCCAAA+AGG | + | chr5.3:3164430-3164449 | None:intergenic | 40.0% | |
| ATTGAAGCAGATGAAGATGC+TGG | + | chr5.3:3164614-3164633 | None:intergenic | 40.0% | |
| CAGCTTCTTCAGAAAGCTTA+TGG | + | chr5.3:3164283-3164302 | None:intergenic | 40.0% | |
| CTACAGAGTTATGGTTGTGA+GGG | - | chr5.3:3164989-3165008 | MS.gene22293:CDS | 40.0% | |
| CTCCTCATTTGAGAATCACA+GGG | - | chr5.3:3164222-3164241 | MS.gene22293:CDS | 40.0% | |
| GAATAGGATCACCTTATCCA+TGG | - | chr5.3:3163751-3163770 | MS.gene22293:CDS | 40.0% | |
| GACAAACTTCGTGTGAAAAC+CGG | - | chr5.3:3164365-3164384 | MS.gene22293:CDS | 40.0% | |
| GAGTTTGTCACCAAAAGTCA+TGG | - | chr5.3:3164664-3164683 | MS.gene22293:CDS | 40.0% | |
| TCACAACGGTTCAACATTGA+TGG | - | chr5.3:3164709-3164728 | MS.gene22293:CDS | 40.0% | |
| TCTACAGAGTTATGGTTGTG+AGG | - | chr5.3:3164988-3165007 | MS.gene22293:CDS | 40.0% | |
| TCTCTACTAAGCCATGGATA+AGG | + | chr5.3:3163765-3163784 | None:intergenic | 40.0% | |
| TGAGGATGATTCATCATCCA+AGG | + | chr5.3:3164438-3164457 | None:intergenic | 40.0% | |
| TGCTAAGAACAGGGTTGAAT+TGG | + | chr5.3:3164325-3164344 | None:intergenic | 40.0% | |
| TGGATGATGAATCATCCTCA+AGG | - | chr5.3:3164438-3164457 | MS.gene22293:CDS | 40.0% | |
| TGTGCAAATCATGTAGCTTC+TGG | - | chr5.3:3163834-3163853 | MS.gene22293:CDS | 40.0% | |
| TTCATCATCCAAGGCCAAAA+GGG | + | chr5.3:3164429-3164448 | None:intergenic | 40.0% | |
| TTGTGAAGGAGCTGAAAGAA+AGG | - | chr5.3:3164865-3164884 | MS.gene22293:CDS | 40.0% | |
| ! | AGACTTGATTCGTGTGGATT+TGG | - | chr5.3:3164920-3164939 | MS.gene22293:CDS | 40.0% |
| ! | ATGGTTGTGTAGTAACTTGC+TGG | - | chr5.3:3165032-3165051 | MS.gene22293:CDS | 40.0% |
| ! | CGACGATGATGATGTTGAAT+CGG | + | chr5.3:3164591-3164610 | None:intergenic | 40.0% |
| ! | GACGATGATGATGTTGAATC+GGG | + | chr5.3:3164590-3164609 | None:intergenic | 40.0% |
| ! | TCATCAGCAGAAAGAGGTTT+TGG | - | chr5.3:3164247-3164266 | MS.gene22293:CDS | 40.0% |
| ! | TCGGTTACAACCATGACTTT+TGG | + | chr5.3:3164677-3164696 | None:intergenic | 40.0% |
| ! | TCTGCAGTTACATTCCCTTT+TGG | - | chr5.3:3164412-3164431 | MS.gene22293:CDS | 40.0% |
| ! | TGAGCTTTTCCCTTTCTTGA+AGG | - | chr5.3:3164061-3164080 | MS.gene22293:CDS | 40.0% |
| !! | TAGTAACTTGCTGGCAAGAT+AGG | - | chr5.3:3165041-3165060 | MS.gene22293:CDS | 40.0% |
| !!! | GAAAGAGGTTTTGGAGCAAA+TGG | - | chr5.3:3164256-3164275 | MS.gene22293:CDS | 40.0% |
| ACGGTTCAACATTGATGGAG+AGG | - | chr5.3:3164714-3164733 | MS.gene22293:CDS | 45.0% | |
| AGGGATTCATCAGCAGAAAG+AGG | - | chr5.3:3164241-3164260 | MS.gene22293:CDS | 45.0% | |
| AGTCATGGTTGTAACCGAAC+AGG | - | chr5.3:3164679-3164698 | MS.gene22293:CDS | 45.0% | |
| ATGGTATGTTGCAGGCAAGA+AGG | - | chr5.3:3164963-3164982 | MS.gene22293:CDS | 45.0% | |
| CCTCCTCATTTGAGAATCAC+AGG | - | chr5.3:3164221-3164240 | MS.gene22293:CDS | 45.0% | |
| CCTGTGATTCTCAAATGAGG+AGG | + | chr5.3:3164224-3164243 | None:intergenic | 45.0% | |
| GAACAGGACTCGAATCACAA+CGG | - | chr5.3:3164695-3164714 | MS.gene22293:CDS | 45.0% | |
| GATCCTATTCCTCCTATGCT+AGG | + | chr5.3:3163741-3163760 | None:intergenic | 45.0% | |
| GATGATGTTGAATCGGGACT+TGG | + | chr5.3:3164584-3164603 | None:intergenic | 45.0% | |
| GCTAGGTGAAACTGACATCA+TGG | + | chr5.3:3163724-3163743 | None:intergenic | 45.0% | |
| GTTGTGATTCGAGTCCTGTT+CGG | + | chr5.3:3164696-3164715 | None:intergenic | 45.0% | |
| TCACCTAGCATAGGAGGAAT+AGG | - | chr5.3:3163735-3163754 | MS.gene22293:CDS | 45.0% | |
| TCAGTTTCACCTAGCATAGG+AGG | - | chr5.3:3163729-3163748 | MS.gene22293:CDS | 45.0% | |
| ! | GCTTTTCCCTTTCTTGAAGG+TGG | - | chr5.3:3164064-3164083 | MS.gene22293:CDS | 45.0% |
| ! | GTTACATTCCCTTTTGGCCT+TGG | - | chr5.3:3164418-3164437 | MS.gene22293:CDS | 45.0% |
| ! | TCACTGAAGCACTTGCTGAT+AGG | - | chr5.3:3163946-3163965 | MS.gene22293:CDS | 45.0% |
| ! | TGAGAAGATGCTGTTTGGTG+AGG | - | chr5.3:3164823-3164842 | MS.gene22293:CDS | 45.0% |
| ! | TTTAAGGCTCTATGGAGTCC+AGG | + | chr5.3:3163987-3164006 | None:intergenic | 45.0% |
| !! | GTTTTGAGTGCAAGACCTGA+AGG | - | chr5.3:3164197-3164216 | MS.gene22293:CDS | 45.0% |
| ATGCTGCTGAACCTGCACAA+TGG | - | chr5.3:3164159-3164178 | MS.gene22293:CDS | 50.0% | |
| CAACAACAGCTTGGAGAGCT+AGG | - | chr5.3:3165074-3165093 | MS.gene22293:CDS | 50.0% | |
| CTCAAATGAGGAGGACCTTC+AGG | + | chr5.3:3164215-3164234 | None:intergenic | 50.0% | |
| CTCTGCATAGTGTCTCCATC+AGG | + | chr5.3:3163912-3163931 | None:intergenic | 50.0% | |
| TCACAGCTTGCAACTCCTGA+TGG | - | chr5.3:3163894-3163913 | MS.gene22293:CDS | 50.0% | |
| ACTAATTGCAAGCGCCTCGC+CGG | + | chr5.3:3164387-3164406 | None:intergenic | 55.0% | |
| ACTTCGTGTGAAAACCGGCG+AGG | - | chr5.3:3164370-3164389 | MS.gene22293:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 3163657 | 3165102 | 3163657 | ID=MS.gene22293 |
| chr5.3 | mRNA | 3163657 | 3165102 | 3163657 | ID=MS.gene22293.t1;Parent=MS.gene22293 |
| chr5.3 | exon | 3163657 | 3165102 | 3163657 | ID=MS.gene22293.t1.exon1;Parent=MS.gene22293.t1 |
| chr5.3 | CDS | 3163657 | 3165102 | 3163657 | ID=cds.MS.gene22293.t1;Parent=MS.gene22293.t1 |
| Gene Sequence |
| Protein sequence |
