Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050605.t1 | XP_024625734.1 | 89.5 | 562 | 54 | 1 | 1 | 562 | 1 | 557 | 7.70E-272 | 946 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050605.t1 | Q66GQ2 | 34.9 | 496 | 206 | 13 | 1 | 416 | 1 | 459 | 1.2e-50 | 202.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050605.t1 | A0A396H8E0 | 89.5 | 562 | 54 | 1 | 1 | 562 | 1 | 557 | 5.6e-272 | 946.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene050605 | 0.837973 | 3.79E-57 | -1.69E-46 |
MS.gene049435 | MS.gene050605 | 0.806683 | 7.30E-50 | -1.69E-46 |
MS.gene050105 | MS.gene050605 | 0.803089 | 4.12E-49 | -1.69E-46 |
MS.gene050228 | MS.gene050605 | 0.80417 | 2.46E-49 | -1.69E-46 |
MS.gene050442 | MS.gene050605 | 0.820429 | 6.89E-53 | -1.69E-46 |
MS.gene050605 | MS.gene050642 | 0.806427 | 8.27E-50 | -1.69E-46 |
MS.gene050605 | MS.gene050680 | 0.804457 | 2.14E-49 | -1.69E-46 |
MS.gene050605 | MS.gene050750 | 0.838824 | 2.29E-57 | -1.69E-46 |
MS.gene050605 | MS.gene050953 | 0.844952 | 5.49E-59 | -1.69E-46 |
MS.gene050605 | MS.gene051198 | 0.814046 | 1.88E-51 | -1.69E-46 |
MS.gene050605 | MS.gene051368 | 0.833595 | 4.87E-56 | -1.69E-46 |
MS.gene050605 | MS.gene051370 | 0.820885 | 5.41E-53 | -1.69E-46 |
MS.gene050605 | MS.gene051983 | 0.802545 | 5.33E-49 | -1.69E-46 |
MS.gene050605 | MS.gene052012 | 0.814177 | 1.76E-51 | -1.69E-46 |
MS.gene050605 | MS.gene052333 | 0.831679 | 1.46E-55 | -1.69E-46 |
MS.gene050605 | MS.gene052426 | 0.843799 | 1.12E-58 | -1.69E-46 |
MS.gene050605 | MS.gene052500 | 0.804256 | 2.36E-49 | -1.69E-46 |
MS.gene050605 | MS.gene052502 | 0.812844 | 3.46E-51 | -1.69E-46 |
MS.gene050605 | MS.gene052826 | 0.808226 | 3.44E-50 | -1.69E-46 |
MS.gene050605 | MS.gene05288 | 0.811802 | 5.83E-51 | -1.69E-46 |
MS.gene050605 | MS.gene05289 | 0.812224 | 4.72E-51 | -1.69E-46 |
MS.gene050605 | MS.gene053008 | 0.807289 | 5.44E-50 | -1.69E-46 |
MS.gene050605 | MS.gene053080 | 0.803297 | 3.73E-49 | -1.69E-46 |
MS.gene050605 | MS.gene053166 | 0.81792 | 2.57E-52 | -1.69E-46 |
MS.gene050605 | MS.gene054405 | 0.841969 | 3.44E-58 | -1.69E-46 |
MS.gene050605 | MS.gene054559 | 0.812078 | 5.08E-51 | -1.69E-46 |
MS.gene050605 | MS.gene054657 | 0.81685 | 4.47E-52 | -1.69E-46 |
MS.gene050605 | MS.gene054658 | 0.80947 | 1.86E-50 | -1.69E-46 |
MS.gene050605 | MS.gene05510 | 0.839726 | 1.33E-57 | -1.69E-46 |
MS.gene050605 | MS.gene055222 | 0.808624 | 2.83E-50 | -1.69E-46 |
MS.gene050605 | MS.gene055623 | 0.805065 | 1.60E-49 | -1.69E-46 |
MS.gene050605 | MS.gene055701 | 0.850956 | 1.21E-60 | -1.69E-46 |
MS.gene050605 | MS.gene056506 | 0.83797 | 3.79E-57 | -1.69E-46 |
MS.gene050605 | MS.gene056979 | 0.80167 | 8.07E-49 | -1.69E-46 |
MS.gene050605 | MS.gene057693 | 0.804835 | 1.78E-49 | -1.69E-46 |
MS.gene050605 | MS.gene058010 | 0.808493 | 3.01E-50 | -1.69E-46 |
MS.gene050605 | MS.gene058146 | 0.836152 | 1.11E-56 | -1.69E-46 |
MS.gene050605 | MS.gene058548 | 0.829193 | 5.90E-55 | -1.69E-46 |
MS.gene050605 | MS.gene058549 | 0.818961 | 1.49E-52 | -1.69E-46 |
MS.gene050605 | MS.gene058595 | 0.847008 | 1.52E-59 | -1.69E-46 |
MS.gene050605 | MS.gene05868 | 0.813844 | 2.08E-51 | -1.69E-46 |
MS.gene050605 | MS.gene058979 | 0.832927 | 7.15E-56 | -1.69E-46 |
MS.gene050605 | MS.gene059161 | 0.809111 | 2.22E-50 | -1.69E-46 |
MS.gene050605 | MS.gene059550 | 0.800261 | 1.57E-48 | -1.69E-46 |
MS.gene050605 | MS.gene059609 | 0.827726 | 1.33E-54 | -1.69E-46 |
MS.gene050605 | MS.gene05979 | 0.835519 | 1.60E-56 | -1.69E-46 |
MS.gene050605 | MS.gene059842 | 0.815343 | 9.70E-52 | -1.69E-46 |
MS.gene050605 | MS.gene060011 | 0.843385 | 1.45E-58 | -1.69E-46 |
MS.gene050605 | MS.gene060310 | 0.805198 | 1.50E-49 | -1.69E-46 |
MS.gene050605 | MS.gene060322 | 0.825993 | 3.46E-54 | -1.69E-46 |
MS.gene050605 | MS.gene060683 | 0.814813 | 1.27E-51 | -1.69E-46 |
MS.gene050605 | MS.gene060685 | 0.80953 | 1.81E-50 | -1.69E-46 |
MS.gene050605 | MS.gene060802 | 0.827651 | 1.39E-54 | -1.69E-46 |
MS.gene050605 | MS.gene060803 | 0.825949 | 3.55E-54 | -1.69E-46 |
MS.gene050605 | MS.gene060998 | 0.816866 | 4.43E-52 | -1.69E-46 |
MS.gene050605 | MS.gene062885 | 0.809506 | 1.83E-50 | -1.69E-46 |
MS.gene050605 | MS.gene062926 | 0.822887 | 1.86E-53 | -1.69E-46 |
MS.gene050605 | MS.gene06303 | 0.816917 | 4.32E-52 | -1.69E-46 |
MS.gene050605 | MS.gene063209 | 0.802262 | 6.10E-49 | -1.69E-46 |
MS.gene050605 | MS.gene064293 | 0.833669 | 4.67E-56 | -1.69E-46 |
MS.gene050605 | MS.gene064460 | 0.802312 | 5.96E-49 | -1.69E-46 |
MS.gene050605 | MS.gene06564 | 0.812963 | 3.25E-51 | -1.69E-46 |
MS.gene050605 | MS.gene065904 | 0.801167 | 1.02E-48 | -1.69E-46 |
MS.gene050605 | MS.gene066239 | 0.832457 | 9.35E-56 | -1.69E-46 |
MS.gene050605 | MS.gene066264 | 0.818074 | 2.37E-52 | -1.69E-46 |
MS.gene050605 | MS.gene066320 | 0.814589 | 1.43E-51 | -1.69E-46 |
MS.gene050605 | MS.gene066321 | 0.823045 | 1.71E-53 | -1.69E-46 |
MS.gene050605 | MS.gene066745 | 0.818649 | 1.76E-52 | -1.69E-46 |
MS.gene050605 | MS.gene067173 | 0.83413 | 3.58E-56 | -1.69E-46 |
MS.gene050605 | MS.gene067553 | 0.800377 | 1.48E-48 | -1.69E-46 |
MS.gene050605 | MS.gene067566 | 0.828915 | 6.89E-55 | -1.69E-46 |
MS.gene050605 | MS.gene067815 | 0.806179 | 9.33E-50 | -1.69E-46 |
MS.gene050605 | MS.gene068250 | 0.814363 | 1.60E-51 | -1.69E-46 |
MS.gene050605 | MS.gene068514 | 0.800265 | 1.56E-48 | -1.69E-46 |
MS.gene050605 | MS.gene068526 | 0.83233 | 1.01E-55 | -1.69E-46 |
MS.gene050605 | MS.gene068529 | 0.809419 | 1.91E-50 | -1.69E-46 |
MS.gene050605 | MS.gene068777 | 0.811126 | 8.18E-51 | -1.69E-46 |
MS.gene050605 | MS.gene069110 | 0.801551 | 8.54E-49 | -1.69E-46 |
MS.gene050605 | MS.gene069554 | 0.823727 | 1.19E-53 | -1.69E-46 |
MS.gene050605 | MS.gene069555 | 0.801562 | 8.49E-49 | -1.69E-46 |
MS.gene050605 | MS.gene070553 | 0.825118 | 5.58E-54 | -1.69E-46 |
MS.gene050605 | MS.gene070685 | 0.830546 | 2.76E-55 | -1.69E-46 |
MS.gene050605 | MS.gene07150 | 0.821266 | 4.42E-53 | -1.69E-46 |
MS.gene050605 | MS.gene071884 | 0.807948 | 3.94E-50 | -1.69E-46 |
MS.gene050605 | MS.gene071943 | 0.805082 | 1.58E-49 | -1.69E-46 |
MS.gene050605 | MS.gene072023 | 0.810293 | 1.24E-50 | -1.69E-46 |
MS.gene050605 | MS.gene072098 | 0.830457 | 2.91E-55 | -1.69E-46 |
MS.gene050605 | MS.gene072677 | 0.809038 | 2.31E-50 | -1.69E-46 |
MS.gene050605 | MS.gene073008 | 0.811182 | 7.96E-51 | -1.69E-46 |
MS.gene050605 | MS.gene073016 | -0.838524 | 2.73E-57 | -1.69E-46 |
MS.gene050605 | MS.gene07344 | 0.830434 | 2.94E-55 | -1.69E-46 |
MS.gene050605 | MS.gene073460 | 0.839263 | 1.76E-57 | -1.69E-46 |
MS.gene050605 | MS.gene073853 | 0.832706 | 8.11E-56 | -1.69E-46 |
MS.gene050605 | MS.gene074026 | 0.80024 | 1.58E-48 | -1.69E-46 |
MS.gene050605 | MS.gene074184 | -0.801206 | 1.00E-48 | -1.69E-46 |
MS.gene050605 | MS.gene074393 | -0.850193 | 1.99E-60 | -1.69E-46 |
MS.gene050605 | MS.gene07882 | 0.80157 | 8.46E-49 | -1.69E-46 |
MS.gene050605 | MS.gene08200 | 0.825786 | 3.88E-54 | -1.69E-46 |
MS.gene050605 | MS.gene08319 | 0.801627 | 8.24E-49 | -1.69E-46 |
MS.gene050605 | MS.gene08324 | -0.802054 | 6.73E-49 | -1.69E-46 |
MS.gene050605 | MS.gene08782 | 0.835482 | 1.64E-56 | -1.69E-46 |
MS.gene050605 | MS.gene09952 | 0.810252 | 1.26E-50 | -1.69E-46 |
MS.gene050605 | MS.gene20184 | 0.833939 | 4.00E-56 | -1.69E-46 |
MS.gene050605 | MS.gene21149 | 0.803882 | 2.82E-49 | -1.69E-46 |
MS.gene050605 | MS.gene21549 | 0.803259 | 3.80E-49 | -1.69E-46 |
MS.gene050605 | MS.gene21562 | 0.801929 | 7.14E-49 | -1.69E-46 |
MS.gene050605 | MS.gene21676 | 0.874879 | 4.78E-68 | -1.69E-46 |
MS.gene050605 | MS.gene21911 | 0.821333 | 4.27E-53 | -1.69E-46 |
MS.gene050605 | MS.gene22091 | 0.844414 | 7.67E-59 | -1.69E-46 |
MS.gene050605 | MS.gene22293 | 0.863961 | 1.71E-64 | -1.69E-46 |
MS.gene050605 | MS.gene22691 | 0.824798 | 6.64E-54 | -1.69E-46 |
MS.gene050605 | MS.gene22731 | 0.800756 | 1.24E-48 | -1.69E-46 |
MS.gene050605 | MS.gene22820 | -0.820683 | 6.03E-53 | -1.69E-46 |
MS.gene050605 | MS.gene22833 | 0.938906 | 3.10E-99 | -1.69E-46 |
MS.gene050605 | MS.gene23304 | 0.800202 | 1.61E-48 | -1.69E-46 |
MS.gene050605 | MS.gene23945 | 0.821723 | 3.47E-53 | -1.69E-46 |
MS.gene050605 | MS.gene24067 | 0.834959 | 2.22E-56 | -1.69E-46 |
MS.gene050605 | MS.gene24086 | 0.802421 | 5.66E-49 | -1.69E-46 |
MS.gene050605 | MS.gene24337 | 0.816531 | 5.27E-52 | -1.69E-46 |
MS.gene050605 | MS.gene24429 | 0.801134 | 1.04E-48 | -1.69E-46 |
MS.gene050605 | MS.gene25151 | 0.814662 | 1.37E-51 | -1.69E-46 |
MS.gene050605 | MS.gene25913 | -0.850917 | 1.25E-60 | -1.69E-46 |
MS.gene050605 | MS.gene27008 | 0.811651 | 6.29E-51 | -1.69E-46 |
MS.gene050605 | MS.gene27111 | 0.808509 | 2.99E-50 | -1.69E-46 |
MS.gene050605 | MS.gene27271 | 0.803647 | 3.15E-49 | -1.69E-46 |
MS.gene050605 | MS.gene28498 | 0.806149 | 9.46E-50 | -1.69E-46 |
MS.gene050605 | MS.gene28709 | 0.849211 | 3.74E-60 | -1.69E-46 |
MS.gene050605 | MS.gene28862 | 0.823598 | 1.27E-53 | -1.69E-46 |
MS.gene050605 | MS.gene28864 | 0.804638 | 1.96E-49 | -1.69E-46 |
MS.gene050605 | MS.gene28944 | 0.805254 | 1.46E-49 | -1.69E-46 |
MS.gene050605 | MS.gene29000 | 0.848654 | 5.34E-60 | -1.69E-46 |
MS.gene050605 | MS.gene29086 | 0.823838 | 1.12E-53 | -1.69E-46 |
MS.gene050605 | MS.gene29756 | 0.815371 | 9.57E-52 | -1.69E-46 |
MS.gene050605 | MS.gene29773 | 0.8298 | 4.20E-55 | -1.69E-46 |
MS.gene050605 | MS.gene31283 | 0.820853 | 5.51E-53 | -1.69E-46 |
MS.gene050605 | MS.gene31503 | 0.810149 | 1.33E-50 | -1.69E-46 |
MS.gene050605 | MS.gene31876 | 0.828104 | 1.08E-54 | -1.69E-46 |
MS.gene050605 | MS.gene32231 | 0.813208 | 2.88E-51 | -1.69E-46 |
MS.gene050605 | MS.gene32874 | 0.829624 | 4.64E-55 | -1.69E-46 |
MS.gene050605 | MS.gene34071 | 0.821095 | 4.84E-53 | -1.69E-46 |
MS.gene050605 | MS.gene34687 | 0.800609 | 1.33E-48 | -1.69E-46 |
MS.gene050605 | MS.gene34936 | -0.802952 | 4.39E-49 | -1.69E-46 |
MS.gene050605 | MS.gene35121 | 0.855494 | 6.08E-62 | -1.69E-46 |
MS.gene050605 | MS.gene35264 | 0.802524 | 5.38E-49 | -1.69E-46 |
MS.gene050605 | MS.gene35611 | 0.812727 | 3.67E-51 | -1.69E-46 |
MS.gene050605 | MS.gene35822 | 0.81259 | 3.93E-51 | -1.69E-46 |
MS.gene050605 | MS.gene35823 | 0.812617 | 3.87E-51 | -1.69E-46 |
MS.gene050605 | MS.gene35824 | 0.820195 | 7.80E-53 | -1.69E-46 |
MS.gene050605 | MS.gene35864 | 0.814053 | 1.87E-51 | -1.69E-46 |
MS.gene050605 | MS.gene35867 | 0.802063 | 6.70E-49 | -1.69E-46 |
MS.gene050605 | MS.gene36384 | 0.84122 | 5.42E-58 | -1.69E-46 |
MS.gene050605 | MS.gene36453 | 0.848717 | 5.13E-60 | -1.69E-46 |
MS.gene050605 | MS.gene36569 | 0.804473 | 2.12E-49 | -1.69E-46 |
MS.gene050605 | MS.gene37725 | 0.802457 | 5.56E-49 | -1.69E-46 |
MS.gene050605 | MS.gene38106 | 0.805302 | 1.43E-49 | -1.69E-46 |
MS.gene050605 | MS.gene38381 | 0.849268 | 3.61E-60 | -1.69E-46 |
MS.gene050605 | MS.gene38702 | 0.808518 | 2.98E-50 | -1.69E-46 |
MS.gene050605 | MS.gene39430 | 0.811028 | 8.59E-51 | -1.69E-46 |
MS.gene050605 | MS.gene39955 | 0.808058 | 3.73E-50 | -1.69E-46 |
MS.gene050605 | MS.gene40381 | -0.824532 | 7.67E-54 | -1.69E-46 |
MS.gene050605 | MS.gene40462 | 0.800041 | 1.74E-48 | -1.69E-46 |
MS.gene050605 | MS.gene41121 | 0.829367 | 5.36E-55 | -1.69E-46 |
MS.gene050605 | MS.gene41734 | 0.827813 | 1.27E-54 | -1.69E-46 |
MS.gene050605 | MS.gene41838 | 0.85027 | 1.89E-60 | -1.69E-46 |
MS.gene050605 | MS.gene42125 | 0.832062 | 1.17E-55 | -1.69E-46 |
MS.gene050605 | MS.gene42645 | 0.80645 | 8.18E-50 | -1.69E-46 |
MS.gene050605 | MS.gene43430 | 0.821541 | 3.82E-53 | -1.69E-46 |
MS.gene050605 | MS.gene43459 | 0.813383 | 2.63E-51 | -1.69E-46 |
MS.gene050605 | MS.gene44461 | 0.809738 | 1.63E-50 | -1.69E-46 |
MS.gene050605 | MS.gene45170 | 0.804233 | 2.38E-49 | -1.69E-46 |
MS.gene050605 | MS.gene45422 | 0.822339 | 2.50E-53 | -1.69E-46 |
MS.gene050605 | MS.gene46128 | 0.807842 | 4.15E-50 | -1.69E-46 |
MS.gene050605 | MS.gene46885 | 0.819002 | 1.46E-52 | -1.69E-46 |
MS.gene050605 | MS.gene47531 | 0.808203 | 3.48E-50 | -1.69E-46 |
MS.gene050605 | MS.gene47603 | 0.802327 | 5.91E-49 | -1.69E-46 |
MS.gene050605 | MS.gene48988 | 0.868001 | 9.03E-66 | -1.69E-46 |
MS.gene050605 | MS.gene49565 | 0.801453 | 8.94E-49 | -1.69E-46 |
MS.gene050605 | MS.gene49602 | 0.801376 | 9.27E-49 | -1.69E-46 |
MS.gene050605 | MS.gene49940 | 0.856488 | 3.11E-62 | -1.69E-46 |
MS.gene050605 | MS.gene49946 | 0.803953 | 2.73E-49 | -1.69E-46 |
MS.gene050605 | MS.gene50708 | 0.834664 | 2.63E-56 | -1.69E-46 |
MS.gene050605 | MS.gene51650 | 0.825541 | 4.43E-54 | -1.69E-46 |
MS.gene050605 | MS.gene52115 | 0.802119 | 6.53E-49 | -1.69E-46 |
MS.gene050605 | MS.gene52357 | 0.806621 | 7.53E-50 | -1.69E-46 |
MS.gene050605 | MS.gene52448 | 0.858198 | 9.71E-63 | -1.69E-46 |
MS.gene050605 | MS.gene53156 | 0.801866 | 7.36E-49 | -1.69E-46 |
MS.gene050605 | MS.gene53182 | 0.806324 | 8.69E-50 | -1.69E-46 |
MS.gene050605 | MS.gene53579 | 0.828994 | 6.60E-55 | -1.69E-46 |
MS.gene050605 | MS.gene54512 | 0.834378 | 3.10E-56 | -1.69E-46 |
MS.gene050605 | MS.gene54540 | 0.804296 | 2.31E-49 | -1.69E-46 |
MS.gene050605 | MS.gene55357 | 0.811509 | 6.76E-51 | -1.69E-46 |
MS.gene050605 | MS.gene55396 | 0.839621 | 1.42E-57 | -1.69E-46 |
MS.gene050605 | MS.gene55540 | 0.806035 | 1.00E-49 | -1.69E-46 |
MS.gene050605 | MS.gene55717 | 0.802176 | 6.35E-49 | -1.69E-46 |
MS.gene050605 | MS.gene55718 | 0.819807 | 9.57E-53 | -1.69E-46 |
MS.gene050605 | MS.gene56227 | 0.823449 | 1.38E-53 | -1.69E-46 |
MS.gene050605 | MS.gene56229 | 0.80388 | 2.82E-49 | -1.69E-46 |
MS.gene050605 | MS.gene56431 | 0.822038 | 2.93E-53 | -1.69E-46 |
MS.gene050605 | MS.gene56537 | 0.817349 | 3.45E-52 | -1.69E-46 |
MS.gene050605 | MS.gene56840 | 0.8318 | 1.36E-55 | -1.69E-46 |
MS.gene050605 | MS.gene57183 | 0.817005 | 4.13E-52 | -1.69E-46 |
MS.gene050605 | MS.gene57469 | 0.837681 | 4.50E-57 | -1.69E-46 |
MS.gene050605 | MS.gene58278 | 0.807968 | 3.90E-50 | -1.69E-46 |
MS.gene050605 | MS.gene58503 | 0.859861 | 3.09E-63 | -1.69E-46 |
MS.gene050605 | MS.gene59215 | 0.800248 | 1.58E-48 | -1.69E-46 |
MS.gene050605 | MS.gene59336 | 0.806068 | 9.84E-50 | -1.69E-46 |
MS.gene050605 | MS.gene59948 | 0.841073 | 5.93E-58 | -1.69E-46 |
MS.gene050605 | MS.gene59949 | 0.837203 | 5.97E-57 | -1.69E-46 |
MS.gene050605 | MS.gene60204 | 0.820973 | 5.17E-53 | -1.69E-46 |
MS.gene050605 | MS.gene60206 | 0.840312 | 9.38E-58 | -1.69E-46 |
MS.gene050605 | MS.gene60631 | 0.804066 | 2.58E-49 | -1.69E-46 |
MS.gene050605 | MS.gene60680 | 0.81691 | 4.33E-52 | -1.69E-46 |
MS.gene050605 | MS.gene60903 | 0.837004 | 6.71E-57 | -1.69E-46 |
MS.gene050605 | MS.gene61139 | 0.832439 | 9.45E-56 | -1.69E-46 |
MS.gene050605 | MS.gene61435 | 0.854881 | 9.16E-62 | -1.69E-46 |
MS.gene050605 | MS.gene62393 | 0.833369 | 5.55E-56 | -1.69E-46 |
MS.gene050605 | MS.gene62892 | 0.824023 | 1.01E-53 | -1.69E-46 |
MS.gene050605 | MS.gene63058 | 0.802512 | 5.42E-49 | -1.69E-46 |
MS.gene050605 | MS.gene63412 | 0.822574 | 2.20E-53 | -1.69E-46 |
MS.gene050605 | MS.gene63984 | 0.81539 | 9.47E-52 | -1.69E-46 |
MS.gene050605 | MS.gene64243 | 0.803387 | 3.57E-49 | -1.69E-46 |
MS.gene050605 | MS.gene64417 | 0.833325 | 5.69E-56 | -1.69E-46 |
MS.gene050605 | MS.gene64710 | 0.800832 | 1.20E-48 | -1.69E-46 |
MS.gene050605 | MS.gene65291 | 0.822066 | 2.89E-53 | -1.69E-46 |
MS.gene050605 | MS.gene65895 | 0.849448 | 3.21E-60 | -1.69E-46 |
MS.gene050605 | MS.gene65896 | 0.813425 | 2.58E-51 | -1.69E-46 |
MS.gene050605 | MS.gene66208 | 0.845146 | 4.87E-59 | -1.69E-46 |
MS.gene050605 | MS.gene66676 | 0.807766 | 4.31E-50 | -1.69E-46 |
MS.gene050605 | MS.gene66964 | 0.810882 | 9.24E-51 | -1.69E-46 |
MS.gene050605 | MS.gene67007 | 0.803529 | 3.34E-49 | -1.69E-46 |
MS.gene050605 | MS.gene67316 | 0.810283 | 1.25E-50 | -1.69E-46 |
MS.gene050605 | MS.gene67346 | 0.825826 | 3.79E-54 | -1.69E-46 |
MS.gene050605 | MS.gene67662 | 0.817182 | 3.77E-52 | -1.69E-46 |
MS.gene050605 | MS.gene68333 | 0.801087 | 1.06E-48 | -1.69E-46 |
MS.gene050605 | MS.gene68528 | 0.829775 | 4.26E-55 | -1.69E-46 |
MS.gene050605 | MS.gene68923 | 0.809301 | 2.02E-50 | -1.69E-46 |
MS.gene050605 | MS.gene69867 | 0.834815 | 2.41E-56 | -1.69E-46 |
MS.gene050605 | MS.gene70021 | 0.82174 | 3.44E-53 | -1.69E-46 |
MS.gene050605 | MS.gene70534 | 0.819665 | 1.03E-52 | -1.69E-46 |
MS.gene050605 | MS.gene70586 | -0.847398 | 1.19E-59 | -1.69E-46 |
MS.gene050605 | MS.gene70895 | 0.802875 | 4.56E-49 | -1.69E-46 |
MS.gene050605 | MS.gene71871 | 0.817417 | 3.33E-52 | -1.69E-46 |
MS.gene050605 | MS.gene71935 | 0.812376 | 4.37E-51 | -1.69E-46 |
MS.gene050605 | MS.gene71937 | 0.814704 | 1.35E-51 | -1.69E-46 |
MS.gene050605 | MS.gene72054 | 0.831806 | 1.35E-55 | -1.69E-46 |
MS.gene050605 | MS.gene73140 | 0.821289 | 4.37E-53 | -1.69E-46 |
MS.gene050605 | MS.gene73596 | 0.80835 | 3.23E-50 | -1.69E-46 |
MS.gene050605 | MS.gene73820 | 0.84495 | 5.50E-59 | -1.69E-46 |
MS.gene050605 | MS.gene74444 | 0.849098 | 4.02E-60 | -1.69E-46 |
MS.gene050605 | MS.gene75490 | 0.829606 | 4.69E-55 | -1.69E-46 |
MS.gene050605 | MS.gene75626 | 0.830331 | 3.12E-55 | -1.69E-46 |
MS.gene050605 | MS.gene76949 | 0.817934 | 2.55E-52 | -1.69E-46 |
MS.gene050605 | MS.gene77579 | 0.852681 | 3.93E-61 | -1.69E-46 |
MS.gene050605 | MS.gene78234 | 0.833518 | 5.09E-56 | -1.69E-46 |
MS.gene050605 | MS.gene78478 | 0.831361 | 1.74E-55 | -1.69E-46 |
MS.gene050605 | MS.gene78682 | 0.834057 | 3.73E-56 | -1.69E-46 |
MS.gene050605 | MS.gene79285 | 0.803474 | 3.43E-49 | -1.69E-46 |
MS.gene050605 | MS.gene79604 | 0.822033 | 2.94E-53 | -1.69E-46 |
MS.gene050605 | MS.gene79884 | 0.805114 | 1.56E-49 | -1.69E-46 |
MS.gene050605 | MS.gene80919 | 0.831103 | 2.02E-55 | -1.69E-46 |
MS.gene050605 | MS.gene81653 | 0.83927 | 1.75E-57 | -1.69E-46 |
MS.gene050605 | MS.gene82805 | 0.812935 | 3.30E-51 | -1.69E-46 |
MS.gene050605 | MS.gene82879 | 0.834023 | 3.81E-56 | -1.69E-46 |
MS.gene050605 | MS.gene82881 | 0.814571 | 1.44E-51 | -1.69E-46 |
MS.gene050605 | MS.gene83734 | 0.817637 | 2.97E-52 | -1.69E-46 |
MS.gene050605 | MS.gene85277 | 0.810385 | 1.18E-50 | -1.69E-46 |
MS.gene050605 | MS.gene85663 | 0.839203 | 1.82E-57 | -1.69E-46 |
MS.gene050605 | MS.gene87669 | 0.843536 | 1.32E-58 | -1.69E-46 |
MS.gene050605 | MS.gene87987 | 0.811935 | 5.46E-51 | -1.69E-46 |
MS.gene050605 | MS.gene88934 | 0.801021 | 1.10E-48 | -1.69E-46 |
MS.gene050605 | MS.gene88988 | 0.814264 | 1.68E-51 | -1.69E-46 |
MS.gene050605 | MS.gene89340 | 0.805211 | 1.49E-49 | -1.69E-46 |
MS.gene050605 | MS.gene89344 | 0.801966 | 7.02E-49 | -1.69E-46 |
MS.gene050605 | MS.gene89511 | 0.827932 | 1.19E-54 | -1.69E-46 |
MS.gene050605 | MS.gene90525 | 0.834248 | 3.35E-56 | -1.69E-46 |
MS.gene050605 | MS.gene90585 | 0.801437 | 9.01E-49 | -1.69E-46 |
MS.gene050605 | MS.gene91523 | 0.801349 | 9.39E-49 | -1.69E-46 |
MS.gene050605 | MS.gene91907 | 0.806791 | 6.93E-50 | -1.69E-46 |
MS.gene050605 | MS.gene92579 | 0.801003 | 1.11E-48 | -1.69E-46 |
MS.gene050605 | MS.gene93041 | 0.832289 | 1.03E-55 | -1.69E-46 |
MS.gene050605 | MS.gene93764 | 0.820226 | 7.67E-53 | -1.69E-46 |
MS.gene050605 | MS.gene95070 | 0.800121 | 1.67E-48 | -1.69E-46 |
MS.gene050605 | MS.gene95697 | 0.818642 | 1.76E-52 | -1.69E-46 |
MS.gene050605 | MS.gene95886 | 0.820948 | 5.24E-53 | -1.69E-46 |
MS.gene050605 | MS.gene96508 | 0.808805 | 2.59E-50 | -1.69E-46 |
MS.gene050605 | MS.gene98325 | 0.801245 | 9.86E-49 | -1.69E-46 |
MS.gene050605 | MS.gene98543 | 0.844366 | 7.90E-59 | -1.69E-46 |
MS.gene050605 | MS.gene98959 | 0.809224 | 2.10E-50 | -1.69E-46 |
MS.gene050605 | MS.gene99030 | 0.800957 | 1.13E-48 | -1.69E-46 |
MS.gene050605 | MS.gene99702 | 0.800774 | 1.23E-48 | -1.69E-46 |
MS.gene050605 | MS.gene99991 | 0.802881 | 4.55E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050605.t1 | MTR_8g028230 | 41.892 | 592 | 252 | 16 | 15 | 561 | 14 | 558 | 1.37e-118 | 362 |
MS.gene050605.t1 | MTR_8g028230 | 41.043 | 575 | 240 | 17 | 15 | 561 | 14 | 517 | 1.30e-111 | 342 |
MS.gene050605.t1 | MTR_8g028230 | 43.775 | 498 | 217 | 11 | 92 | 561 | 9 | 471 | 2.90e-108 | 332 |
MS.gene050605.t1 | MTR_8g028230 | 44.130 | 460 | 204 | 10 | 120 | 561 | 20 | 444 | 3.01e-103 | 318 |
MS.gene050605.t1 | MTR_5g009750 | 41.972 | 355 | 142 | 7 | 62 | 358 | 66 | 414 | 6.50e-73 | 245 |
MS.gene050605.t1 | MTR_7g105430 | 26.950 | 423 | 202 | 13 | 22 | 357 | 36 | 438 | 1.35e-24 | 108 |
MS.gene050605.t1 | MTR_3g051430 | 26.616 | 263 | 179 | 6 | 135 | 396 | 198 | 447 | 1.77e-21 | 99.0 |
MS.gene050605.t1 | MTR_5g092610 | 28.696 | 230 | 150 | 3 | 129 | 358 | 188 | 403 | 1.83e-21 | 99.0 |
MS.gene050605.t1 | MTR_4g052400 | 26.131 | 398 | 221 | 13 | 22 | 356 | 48 | 435 | 8.30e-19 | 90.5 |
MS.gene050605.t1 | MTR_4g052400 | 29.545 | 220 | 148 | 4 | 139 | 356 | 59 | 273 | 2.81e-17 | 85.1 |
MS.gene050605.t1 | MTR_2g086890 | 26.394 | 269 | 184 | 5 | 116 | 379 | 205 | 464 | 9.61e-17 | 84.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050605.t1 | AT5G41620 | 32.101 | 595 | 268 | 16 | 59 | 543 | 42 | 610 | 2.39e-66 | 227 |
MS.gene050605.t1 | AT5G41620 | 34.241 | 514 | 250 | 14 | 92 | 543 | 6 | 493 | 1.55e-63 | 217 |
MS.gene050605.t1 | AT5G41620 | 34.241 | 514 | 250 | 14 | 92 | 543 | 6 | 493 | 1.55e-63 | 217 |
MS.gene050605.t1 | AT1G64180 | 31.071 | 560 | 286 | 15 | 62 | 554 | 61 | 587 | 1.80e-57 | 202 |
MS.gene050605.t1 | AT5G41620 | 46.396 | 222 | 113 | 2 | 139 | 358 | 36 | 253 | 6.29e-54 | 190 |
MS.gene050605.t1 | AT2G46250 | 35.588 | 340 | 153 | 8 | 27 | 329 | 20 | 330 | 1.72e-41 | 156 |
MS.gene050605.t1 | AT3G11590 | 29.647 | 425 | 206 | 11 | 13 | 357 | 35 | 446 | 2.60e-35 | 140 |
MS.gene050605.t1 | AT2G46250 | 40.097 | 207 | 103 | 2 | 123 | 329 | 54 | 239 | 7.38e-33 | 130 |
MS.gene050605.t1 | AT3G11590 | 33.333 | 219 | 142 | 2 | 139 | 357 | 70 | 284 | 7.98e-27 | 114 |
MS.gene050605.t1 | AT1G50660 | 27.206 | 272 | 174 | 8 | 129 | 396 | 212 | 463 | 7.49e-25 | 109 |
MS.gene050605.t1 | AT3G20350 | 24.556 | 338 | 218 | 10 | 75 | 396 | 140 | 456 | 9.93e-24 | 106 |
Find 105 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTTCCTTGACTTCTTTAA+TGG | 0.167681 | 7.3:+1375606 | None:intergenic |
GGTGGAAAAGTTGAAACTTT+TGG | 0.234292 | 7.3:-1377551 | MS.gene050605:CDS |
AGTAAAAGACAATACATTTA+TGG | 0.302608 | 7.3:-1375110 | MS.gene050605:CDS |
TTCATAATCTCTTACTCCTT+TGG | 0.317548 | 7.3:+1375876 | None:intergenic |
TCACCCTTGCCTACCTTCAT+TGG | 0.324543 | 7.3:-1375584 | MS.gene050605:CDS |
GCGGATAAGGATCGCATTAA+TGG | 0.328056 | 7.3:-1375823 | MS.gene050605:CDS |
GAGGGGAAATCAAGTGAAAT+TGG | 0.348447 | 7.3:-1375439 | MS.gene050605:CDS |
CCATTCTGCAGTTACAGTTA+AGG | 0.372039 | 7.3:-1375215 | MS.gene050605:CDS |
ATTGAGCTAAGGCAATTAGA+AGG | 0.381758 | 7.3:+1376631 | None:intergenic |
TTCTAATTGCCTTAGCTCAA+TGG | 0.385938 | 7.3:-1376629 | MS.gene050605:CDS |
CACTAGCCAGCTTCTGATAC+AGG | 0.387417 | 7.3:+1375998 | None:intergenic |
TACTTCACATTTCAGAGGCT+TGG | 0.392687 | 7.3:-1375780 | MS.gene050605:CDS |
ATTGGATTCCTTTCAACTAA+AGG | 0.395468 | 7.3:-1375566 | MS.gene050605:CDS |
ACTGCTTGAAGCAAGGTTAG+AGG | 0.396153 | 7.3:-1375083 | MS.gene050605:CDS |
GAAAATGAATAAGCAGGAAA+TGG | 0.398382 | 7.3:-1376154 | MS.gene050605:CDS |
CATTCTGCAGTTACAGTTAA+GGG | 0.406187 | 7.3:-1375214 | MS.gene050605:CDS |
TTGGAGAAGAGAGGAGGAAG+AGG | 0.410484 | 7.3:-1377532 | MS.gene050605:CDS |
AGACTGAGACATGTTGAAAT+CGG | 0.412710 | 7.3:+1375153 | None:intergenic |
GAAAAGGGAAGAAGGAATAA+TGG | 0.415845 | 7.3:-1377572 | MS.gene050605:CDS |
TGTTTCCAACTAACTGTTCA+AGG | 0.418652 | 7.3:+1375302 | None:intergenic |
TATGCATAATAGTGCGGATA+AGG | 0.427280 | 7.3:-1375836 | MS.gene050605:CDS |
CACAGCCTTGAACAGTTAGT+TGG | 0.447691 | 7.3:-1375307 | MS.gene050605:CDS |
TAGCCGGCGTCTTGAAGAAC+AGG | 0.450663 | 7.3:-1376262 | MS.gene050605:CDS |
TATATCCTGAGAGTATTTGC+AGG | 0.458388 | 7.3:-1375252 | MS.gene050605:CDS |
CTTAACAAGTGCTTTGTTGA+GGG | 0.464066 | 7.3:-1375457 | MS.gene050605:CDS |
CCAACAAGTTTGAACAGAAA+AGG | 0.465731 | 7.3:-1375495 | MS.gene050605:CDS |
TATTGTCTCCTTTAGTTGAA+AGG | 0.466986 | 7.3:+1375558 | None:intergenic |
ATCAGTCGACAGAAATTGTT+CGG | 0.469683 | 7.3:-1376671 | MS.gene050605:CDS |
TTTGTCATCAGAAGGTGATA+AGG | 0.472314 | 7.3:-1375275 | MS.gene050605:CDS |
TATGAGGAGGCTCATGGTGG+TGG | 0.473227 | 7.3:+1377368 | None:intergenic |
GAAATCTCTGTGCTAAACTC+TGG | 0.476454 | 7.3:-1377402 | MS.gene050605:CDS |
AACTCTTGTTGATGAGAAGA+AGG | 0.480434 | 7.3:+1377460 | None:intergenic |
GTGACATGAATTAATTCCCT+TGG | 0.485875 | 7.3:+1375327 | None:intergenic |
AGAAAAGAAAATGAATAAGC+AGG | 0.487246 | 7.3:-1376160 | MS.gene050605:CDS |
TTAATGGTGATAGCCTTGAT+AGG | 0.491514 | 7.3:-1375807 | MS.gene050605:CDS |
TACTTACTTCCATTGAGCTA+AGG | 0.494927 | 7.3:+1376620 | None:intergenic |
GAGAACCTTGACTAACTCTC+TGG | 0.496123 | 7.3:+1376290 | None:intergenic |
AAAGTCCACCAGAAAATGAT+AGG | 0.498720 | 7.3:-1375357 | MS.gene050605:CDS |
CCTTGACTTCTTTAATGGAG+GGG | 0.499105 | 7.3:+1375611 | None:intergenic |
TCCTTGACTTCTTTAATGGA+GGG | 0.499288 | 7.3:+1375610 | None:intergenic |
AGGAAGAGATTGAAGATGAA+AGG | 0.499321 | 7.3:-1376044 | MS.gene050605:CDS |
CTCGAGTCTCTAGCAGATGC+TGG | 0.502686 | 7.3:+1376730 | None:intergenic |
AAGCAAGTTCAAGATGGTAT+TGG | 0.504529 | 7.3:-1375736 | MS.gene050605:CDS |
GTCTACTAACAAATTGCCTA+GGG | 0.505083 | 7.3:-1375134 | MS.gene050605:CDS |
AGAAGAGAGGAGGAAGAGGA+AGG | 0.512890 | 7.3:-1377528 | MS.gene050605:CDS |
TTCCTTGACTTCTTTAATGG+AGG | 0.515224 | 7.3:+1375609 | None:intergenic |
GACTGAGACATGTTGAAATC+GGG | 0.515513 | 7.3:+1375154 | None:intergenic |
CATCACACAAATTCTCCAAA+AGG | 0.518761 | 7.3:+1375905 | None:intergenic |
AGAAAGCCTGTATCAGAAGC+TGG | 0.520623 | 7.3:-1376004 | MS.gene050605:CDS |
CACCAGAAAATGATAGGTGC+AGG | 0.525944 | 7.3:-1375351 | MS.gene050605:CDS |
CCCCTCCATTAAAGAAGTCA+AGG | 0.526840 | 7.3:-1375611 | MS.gene050605:CDS |
AGTTGAAAGGAATCCAATGA+AGG | 0.527897 | 7.3:+1375571 | None:intergenic |
TTCAAACTTGTTGGTACCAA+CGG | 0.528206 | 7.3:+1375504 | None:intergenic |
CAACTATTGAATGTGTCTCT+AGG | 0.530200 | 7.3:+1375704 | None:intergenic |
TGTGAAGTATTAGCCTATCA+AGG | 0.530785 | 7.3:+1375794 | None:intergenic |
AACAGTTCTTTGTCATCAGA+AGG | 0.531010 | 7.3:-1375283 | MS.gene050605:CDS |
AGTCTACTAACAAATTGCCT+AGG | 0.531127 | 7.3:-1375135 | MS.gene050605:CDS |
AATAGTGAAAGCTCTGATAG+TGG | 0.535399 | 7.3:-1376223 | MS.gene050605:CDS |
GCTTCCTCGGCAAAATTATG+AGG | 0.538410 | 7.3:+1375529 | None:intergenic |
GGTACCAACGGAAGCTTCCT+CGG | 0.539258 | 7.3:+1375516 | None:intergenic |
TGTATGGAGAAAAGGGAAGA+AGG | 0.539368 | 7.3:-1377580 | MS.gene050605:CDS |
CCTTAACTGTAACTGCAGAA+TGG | 0.540574 | 7.3:+1375215 | None:intergenic |
TCTTCCCTGCAAATACTCTC+AGG | 0.540737 | 7.3:+1375247 | None:intergenic |
AAATCTCTGTGCTAAACTCT+GGG | 0.540999 | 7.3:-1377401 | MS.gene050605:CDS |
ACTTAACAAGTGCTTTGTTG+AGG | 0.542539 | 7.3:-1375458 | MS.gene050605:CDS |
GTTCAACACCACCACCCACT+TGG | 0.555840 | 7.3:-1377498 | MS.gene050605:CDS |
TTGAGCTAAGGCAATTAGAA+GGG | 0.559447 | 7.3:+1376632 | None:intergenic |
TTAACAAGTGCTTTGTTGAG+GGG | 0.561075 | 7.3:-1375456 | MS.gene050605:CDS |
TGGCAAAACTGCTTGAAGCA+AGG | 0.561650 | 7.3:-1375090 | MS.gene050605:CDS |
ACAAGTCTCCAAGTGGGTGG+TGG | 0.563442 | 7.3:+1377490 | None:intergenic |
TCACACAAAGTTGATTCTCT+AGG | 0.566264 | 7.3:+1375388 | None:intergenic |
ACTAGATCTTTCTCAAACAC+AGG | 0.567197 | 7.3:-1376199 | MS.gene050605:CDS |
TCAAGGTTCTCAAACGTAGC+CGG | 0.567882 | 7.3:-1376278 | MS.gene050605:CDS |
GCTAATACTTCACATTTCAG+AGG | 0.570361 | 7.3:-1375785 | MS.gene050605:CDS |
TCATAGTAGTCCCTCTCACC+AGG | 0.572281 | 7.3:-1377344 | MS.gene050605:intron |
CAAATGAAGCAAGTTCAAGA+TGG | 0.575876 | 7.3:-1375742 | MS.gene050605:CDS |
AAATGATAGGTGCAGGACCA+AGG | 0.580181 | 7.3:-1375344 | MS.gene050605:CDS |
GAGGGACTACTATGACTATG+AGG | 0.581362 | 7.3:+1377352 | None:intergenic |
GAATCCAATGAAGGTAGGCA+AGG | 0.585447 | 7.3:+1375580 | None:intergenic |
AAGAGATTGAAGATGAAAGG+AGG | 0.590101 | 7.3:-1376041 | MS.gene050605:CDS |
AGCTGTAGTTCAATCAGTCA+AGG | 0.591551 | 7.3:-1376064 | MS.gene050605:CDS |
AATGATAGGTGCAGGACCAA+GGG | 0.594126 | 7.3:-1375343 | MS.gene050605:CDS |
TATGACTATGAGGAGGCTCA+TGG | 0.595092 | 7.3:+1377362 | None:intergenic |
ATGAGGAGGCTCATGGTGGT+GGG | 0.595906 | 7.3:+1377369 | None:intergenic |
AAGAAAAGTACCTGGTGAGA+GGG | 0.598007 | 7.3:+1377334 | None:intergenic |
CAAGAAAAGTACCTGGTGAG+AGG | 0.598348 | 7.3:+1377333 | None:intergenic |
GGAAATCAAGTGAAATTGGA+AGG | 0.599065 | 7.3:-1375435 | MS.gene050605:CDS |
TTCTATTATGCATAATAGTG+CGG | 0.602383 | 7.3:-1375842 | MS.gene050605:CDS |
TTTGCCGAGGAAGCTTCCGT+TGG | 0.615175 | 7.3:-1375520 | MS.gene050605:CDS |
GAAAGGAATCCAATGAAGGT+AGG | 0.616541 | 7.3:+1375575 | None:intergenic |
AAGGGAAGAAGGAATAATGG+TGG | 0.618908 | 7.3:-1377569 | MS.gene050605:CDS |
CAAGCATCAGTTGTTCAGCA+CGG | 0.633336 | 7.3:-1376697 | MS.gene050605:CDS |
GTCATCCAGAGAGTTAGTCA+AGG | 0.646355 | 7.3:-1376295 | MS.gene050605:CDS |
TGAGCTAAGGCAATTAGAAG+GGG | 0.649817 | 7.3:+1376633 | None:intergenic |
ATATCCTGAGAGTATTTGCA+GGG | 0.650780 | 7.3:-1375251 | MS.gene050605:CDS |
AATCCAATGAAGGTAGGCAA+GGG | 0.653423 | 7.3:+1375581 | None:intergenic |
GAAGTGAAGTCTTTGTTACG+TGG | 0.664790 | 7.3:-1375967 | MS.gene050605:CDS |
TCAACAAGTCTCCAAGTGGG+TGG | 0.665483 | 7.3:+1377487 | None:intergenic |
AAAGTCAACAAGTCTCCAAG+TGG | 0.666077 | 7.3:+1377483 | None:intergenic |
AAGTCAACAAGTCTCCAAGT+GGG | 0.688185 | 7.3:+1377484 | None:intergenic |
GGACTACTATGACTATGAGG+AGG | 0.700817 | 7.3:+1377355 | None:intergenic |
GACTATGAGGAGGCTCATGG+TGG | 0.712982 | 7.3:+1377365 | None:intergenic |
CATCCTGTTCTTCAAGACGC+CGG | 0.714018 | 7.3:+1376259 | None:intergenic |
GTTTGAACAGAAAAGGACTG+CGG | 0.744270 | 7.3:-1375488 | MS.gene050605:CDS |
TCTACTAACAAATTGCCTAG+GGG | 0.750446 | 7.3:-1375133 | MS.gene050605:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTAATGACATTTT+TGG | - | chr7.3:1375354-1375373 | MS.gene050605:CDS | 10.0% |
!! | AGAATGAAATAAATTTGAAT+AGG | - | chr7.3:1375652-1375671 | MS.gene050605:CDS | 15.0% |
!! | AAACAGAAATTACCAATTAT+AGG | + | chr7.3:1375441-1375460 | None:intergenic | 20.0% |
!! | AGTAAAAGACAATACATTTA+TGG | - | chr7.3:1377530-1377549 | MS.gene050605:CDS | 20.0% |
!! | AGTTCTATATATCAATTAAG+AGG | - | chr7.3:1375496-1375515 | MS.gene050605:CDS | 20.0% |
!! | ATTCTTTAACATCAACATTA+GGG | + | chr7.3:1375637-1375656 | None:intergenic | 20.0% |
!! | GTTCTATATATCAATTAAGA+GGG | - | chr7.3:1375497-1375516 | MS.gene050605:CDS | 20.0% |
! | AAACATTAATTCCTAAAGTC+AGG | - | chr7.3:1375791-1375810 | MS.gene050605:CDS | 25.0% |
! | AAAGGAAGAACACAATTATA+TGG | + | chr7.3:1375745-1375764 | None:intergenic | 25.0% |
! | AATTTCCTTGACTTCTTTAA+TGG | + | chr7.3:1377037-1377056 | None:intergenic | 25.0% |
! | AGAAAAATGTATGGAGAAAA+GGG | - | chr7.3:1375053-1375072 | MS.gene050605:CDS | 25.0% |
! | AGAAAAGAAAATGAATAAGC+AGG | - | chr7.3:1376480-1376499 | MS.gene050605:intron | 25.0% |
! | CATTCTTTAACATCAACATT+AGG | + | chr7.3:1375638-1375657 | None:intergenic | 25.0% |
! | TAAACTTCTTGAGATTCAAA+TGG | + | chr7.3:1376059-1376078 | None:intergenic | 25.0% |
! | TCGAAAGAGAAAAAAAAGAA+AGG | - | chr7.3:1376710-1376729 | MS.gene050605:CDS | 25.0% |
! | TTCTATTATGCATAATAGTG+CGG | - | chr7.3:1376798-1376817 | MS.gene050605:intron | 25.0% |
!! | AAAAAAAGAAAGGATCCTTT+TGG | - | chr7.3:1376720-1376739 | MS.gene050605:CDS | 25.0% |
!! | AAAAGTGTATGTAAACTAGA+TGG | - | chr7.3:1376242-1376261 | MS.gene050605:CDS | 25.0% |
!! | ACACATTCATCTTTTTATAC+CGG | + | chr7.3:1376297-1376316 | None:intergenic | 25.0% |
!!! | ATATTTTGAATTTCAACTGC+TGG | - | chr7.3:1375863-1375882 | MS.gene050605:CDS | 25.0% |
!!! | GAAGCATTAAAATTGATTTG+AGG | - | chr7.3:1376157-1376176 | MS.gene050605:CDS | 25.0% |
!!! | TGTGTTATTTTTCGTAAAAC+AGG | - | chr7.3:1376312-1376331 | MS.gene050605:intron | 25.0% |
AGTCTTTCAGCTATCAATAA+AGG | + | chr7.3:1375763-1375782 | None:intergenic | 30.0% | |
ATTCCTCTGATGAAAAATCA+AGG | + | chr7.3:1375585-1375604 | None:intergenic | 30.0% | |
ATTGGATTCCTTTCAACTAA+AGG | - | chr7.3:1377074-1377093 | MS.gene050605:intron | 30.0% | |
GAAAATGAATAAGCAGGAAA+TGG | - | chr7.3:1376486-1376505 | MS.gene050605:intron | 30.0% | |
GAACACAATTATATGGACAT+TGG | + | chr7.3:1375738-1375757 | None:intergenic | 30.0% | |
GAGAAAAATGTATGGAGAAA+AGG | - | chr7.3:1375052-1375071 | MS.gene050605:CDS | 30.0% | |
GGAAAGAAGAGAAAAATGTA+TGG | - | chr7.3:1375044-1375063 | MS.gene050605:CDS | 30.0% | |
TAGGGATAGTTAATTCGAAA+AGG | + | chr7.3:1375619-1375638 | None:intergenic | 30.0% | |
TATTGTCTCCTTTAGTTGAA+AGG | + | chr7.3:1377085-1377104 | None:intergenic | 30.0% | |
TCAAACATAATCCTGACTTT+AGG | + | chr7.3:1375805-1375824 | None:intergenic | 30.0% | |
TTCATAATCTCTTACTCCTT+TGG | + | chr7.3:1376767-1376786 | None:intergenic | 30.0% | |
TTCATTAAAAATGCCTCAGA+AGG | + | chr7.3:1376215-1376234 | None:intergenic | 30.0% | |
! | ATCTTTTTATACCGGATGAA+AGG | + | chr7.3:1376289-1376308 | None:intergenic | 30.0% |
! | TCTTTTTATACCGGATGAAA+GGG | + | chr7.3:1376288-1376307 | None:intergenic | 30.0% |
! | TGTTTTCAGATGCCTATAAT+TGG | - | chr7.3:1375426-1375445 | MS.gene050605:CDS | 30.0% |
!! | TACAAAACAAGAAAAGTACC+TGG | + | chr7.3:1375317-1375336 | None:intergenic | 30.0% |
!! | TCTGAGGCATTTTTAATGAA+TGG | - | chr7.3:1376215-1376234 | MS.gene050605:CDS | 30.0% |
!! | TCTGTTTCAGCTTTAAAAGT+TGG | - | chr7.3:1375454-1375473 | MS.gene050605:CDS | 30.0% |
!!! | GTTTTTTTCGACTGTTTAAC+AGG | + | chr7.3:1377456-1377475 | None:intergenic | 30.0% |
AAAGTCCACCAGAAAATGAT+AGG | - | chr7.3:1377283-1377302 | MS.gene050605:intron | 35.0% | |
AAATCTCTGTGCTAAACTCT+GGG | - | chr7.3:1375239-1375258 | MS.gene050605:CDS | 35.0% | |
AACAGTTCTTTGTCATCAGA+AGG | - | chr7.3:1377357-1377376 | MS.gene050605:CDS | 35.0% | |
AAGAGATTGAAGATGAAAGG+AGG | - | chr7.3:1376599-1376618 | MS.gene050605:intron | 35.0% | |
AAGCAAGTTCAAGATGGTAT+TGG | - | chr7.3:1376904-1376923 | MS.gene050605:intron | 35.0% | |
ACTAGATCTTTCTCAAACAC+AGG | - | chr7.3:1376441-1376460 | MS.gene050605:intron | 35.0% | |
AGACTGAGACATGTTGAAAT+CGG | + | chr7.3:1377490-1377509 | None:intergenic | 35.0% | |
AGGAAGAGATTGAAGATGAA+AGG | - | chr7.3:1376596-1376615 | MS.gene050605:intron | 35.0% | |
AGTCTACTAACAAATTGCCT+AGG | - | chr7.3:1377505-1377524 | MS.gene050605:CDS | 35.0% | |
AGTTGAAAGGAATCCAATGA+AGG | + | chr7.3:1377072-1377091 | None:intergenic | 35.0% | |
ATCAGTCGACAGAAATTGTT+CGG | - | chr7.3:1375969-1375988 | MS.gene050605:CDS | 35.0% | |
ATTGAGCTAAGGCAATTAGA+AGG | + | chr7.3:1376012-1376031 | None:intergenic | 35.0% | |
ATTTGAGGAAAATCTCCATG+AGG | - | chr7.3:1376172-1376191 | MS.gene050605:CDS | 35.0% | |
CAAATGAAGCAAGTTCAAGA+TGG | - | chr7.3:1376898-1376917 | MS.gene050605:intron | 35.0% | |
CAACTATTGAATGTGTCTCT+AGG | + | chr7.3:1376939-1376958 | None:intergenic | 35.0% | |
CATCACACAAATTCTCCAAA+AGG | + | chr7.3:1376738-1376757 | None:intergenic | 35.0% | |
CATTCTGCAGTTACAGTTAA+GGG | - | chr7.3:1377426-1377445 | MS.gene050605:CDS | 35.0% | |
CCAACAAGTTTGAACAGAAA+AGG | - | chr7.3:1377145-1377164 | MS.gene050605:intron | 35.0% | |
GAAAAGGGAAGAAGGAATAA+TGG | - | chr7.3:1375068-1375087 | MS.gene050605:CDS | 35.0% | |
GCTAATACTTCACATTTCAG+AGG | - | chr7.3:1376855-1376874 | MS.gene050605:intron | 35.0% | |
GGAAATCAAGTGAAATTGGA+AGG | - | chr7.3:1377205-1377224 | MS.gene050605:intron | 35.0% | |
GTCTACTAACAAATTGCCTA+GGG | - | chr7.3:1377506-1377525 | MS.gene050605:CDS | 35.0% | |
GTGACATGAATTAATTCCCT+TGG | + | chr7.3:1377316-1377335 | None:intergenic | 35.0% | |
TACTTACTTCCATTGAGCTA+AGG | + | chr7.3:1376023-1376042 | None:intergenic | 35.0% | |
TATGCATAATAGTGCGGATA+AGG | - | chr7.3:1376804-1376823 | MS.gene050605:intron | 35.0% | |
TCCTTGACTTCTTTAATGGA+GGG | + | chr7.3:1377033-1377052 | None:intergenic | 35.0% | |
TCTACTAACAAATTGCCTAG+GGG | - | chr7.3:1377507-1377526 | MS.gene050605:CDS | 35.0% | |
TGTTTCCAACTAACTGTTCA+AGG | + | chr7.3:1377341-1377360 | None:intergenic | 35.0% | |
TTCCTTGACTTCTTTAATGG+AGG | + | chr7.3:1377034-1377053 | None:intergenic | 35.0% | |
TTCTAATTGCCTTAGCTCAA+TGG | - | chr7.3:1376011-1376030 | MS.gene050605:CDS | 35.0% | |
TTGAGCTAAGGCAATTAGAA+GGG | + | chr7.3:1376011-1376030 | None:intergenic | 35.0% | |
TTTGAGGAAAATCTCCATGA+GGG | - | chr7.3:1376173-1376192 | MS.gene050605:CDS | 35.0% | |
TTTGTCATCAGAAGGTGATA+AGG | - | chr7.3:1377365-1377384 | MS.gene050605:CDS | 35.0% | |
! | AACTCTTGTTGATGAGAAGA+AGG | + | chr7.3:1375183-1375202 | None:intergenic | 35.0% |
! | AATAGTGAAAGCTCTGATAG+TGG | - | chr7.3:1376417-1376436 | MS.gene050605:intron | 35.0% |
! | ACTTAACAAGTGCTTTGTTG+AGG | - | chr7.3:1377182-1377201 | MS.gene050605:intron | 35.0% |
! | CCTTTTCTGTTCAAACTTGT+TGG | + | chr7.3:1377148-1377167 | None:intergenic | 35.0% |
! | CTTAACAAGTGCTTTGTTGA+GGG | - | chr7.3:1377183-1377202 | MS.gene050605:intron | 35.0% |
! | GATACTTTTACCCTTTCATC+CGG | - | chr7.3:1376275-1376294 | MS.gene050605:CDS | 35.0% |
! | GGTGGAAAAGTTGAAACTTT+TGG | - | chr7.3:1375089-1375108 | MS.gene050605:CDS | 35.0% |
! | TCACACAAAGTTGATTCTCT+AGG | + | chr7.3:1377255-1377274 | None:intergenic | 35.0% |
! | TGTGAAGTATTAGCCTATCA+AGG | + | chr7.3:1376849-1376868 | None:intergenic | 35.0% |
! | TTAACAAGTGCTTTGTTGAG+GGG | - | chr7.3:1377184-1377203 | MS.gene050605:intron | 35.0% |
! | TTAATGGTGATAGCCTTGAT+AGG | - | chr7.3:1376833-1376852 | MS.gene050605:intron | 35.0% |
! | TTGTGTGATGATTTTGCCAA+AGG | - | chr7.3:1376748-1376767 | MS.gene050605:intron | 35.0% |
!! | AAAAGTTGGTGACTTTGGTT+TGG | - | chr7.3:1375468-1375487 | MS.gene050605:CDS | 35.0% |
!! | ATATCCTGAGAGTATTTGCA+GGG | - | chr7.3:1377389-1377408 | MS.gene050605:CDS | 35.0% |
!! | GCTTTAAAAGTTGGTGACTT+TGG | - | chr7.3:1375463-1375482 | MS.gene050605:CDS | 35.0% |
!! | TATATCCTGAGAGTATTTGC+AGG | - | chr7.3:1377388-1377407 | MS.gene050605:CDS | 35.0% |
!! | TTCAAACTTGTTGGTACCAA+CGG | + | chr7.3:1377139-1377158 | None:intergenic | 35.0% |
!! | TTGAAACTTTTGGAGAAGAG+AGG | - | chr7.3:1375099-1375118 | MS.gene050605:CDS | 35.0% |
!!! | ATTTTCTGGTGGACTTTGTA+CGG | + | chr7.3:1377280-1377299 | None:intergenic | 35.0% |
AAAGTCAACAAGTCTCCAAG+TGG | + | chr7.3:1375160-1375179 | None:intergenic | 40.0% | |
AAGGGAAGAAGGAATAATGG+TGG | - | chr7.3:1375071-1375090 | MS.gene050605:CDS | 40.0% | |
AAGTCAACAAGTCTCCAAGT+GGG | + | chr7.3:1375159-1375178 | None:intergenic | 40.0% | |
AATCCAATGAAGGTAGGCAA+GGG | + | chr7.3:1377062-1377081 | None:intergenic | 40.0% | |
AGCTGTAGTTCAATCAGTCA+AGG | - | chr7.3:1376576-1376595 | MS.gene050605:intron | 40.0% | |
CCATTCTGCAGTTACAGTTA+AGG | - | chr7.3:1377425-1377444 | MS.gene050605:CDS | 40.0% | |
CCTTAACTGTAACTGCAGAA+TGG | + | chr7.3:1377428-1377447 | None:intergenic | 40.0% | |
CCTTGACTTCTTTAATGGAG+GGG | + | chr7.3:1377032-1377051 | None:intergenic | 40.0% | |
GAAAGGAATCCAATGAAGGT+AGG | + | chr7.3:1377068-1377087 | None:intergenic | 40.0% | |
GAAATCTCTGTGCTAAACTC+TGG | - | chr7.3:1375238-1375257 | MS.gene050605:CDS | 40.0% | |
GAAGTGAAGTCTTTGTTACG+TGG | - | chr7.3:1376673-1376692 | MS.gene050605:CDS | 40.0% | |
GACTGAGACATGTTGAAATC+GGG | + | chr7.3:1377489-1377508 | None:intergenic | 40.0% | |
GAGGGGAAATCAAGTGAAAT+TGG | - | chr7.3:1377201-1377220 | MS.gene050605:intron | 40.0% | |
GTTTGAACAGAAAAGGACTG+CGG | - | chr7.3:1377152-1377171 | MS.gene050605:intron | 40.0% | |
TACTTCACATTTCAGAGGCT+TGG | - | chr7.3:1376860-1376879 | MS.gene050605:intron | 40.0% | |
TGAGCTAAGGCAATTAGAAG+GGG | + | chr7.3:1376010-1376029 | None:intergenic | 40.0% | |
TGTATGGAGAAAAGGGAAGA+AGG | - | chr7.3:1375060-1375079 | MS.gene050605:CDS | 40.0% | |
! | GCTCCTTGATTTTTCATCAG+AGG | - | chr7.3:1375579-1375598 | MS.gene050605:CDS | 40.0% |
! | GTATTGTCTTTTACTCCCCT+AGG | + | chr7.3:1377525-1377544 | None:intergenic | 40.0% |
! | TTCACCTCATAATTTTGCCG+AGG | - | chr7.3:1377107-1377126 | MS.gene050605:intron | 40.0% |
!! | AAACTTTTGGAGAAGAGAGG+AGG | - | chr7.3:1375102-1375121 | MS.gene050605:CDS | 40.0% |
!! | AAGAAAAGTACCTGGTGAGA+GGG | + | chr7.3:1375309-1375328 | None:intergenic | 40.0% |
!!! | TGCAGAGAGTGTTTTTGAAG+TGG | + | chr7.3:1375217-1375236 | None:intergenic | 40.0% |
AAATGATAGGTGCAGGACCA+AGG | - | chr7.3:1377296-1377315 | MS.gene050605:intron | 45.0% | |
AATGATAGGTGCAGGACCAA+GGG | - | chr7.3:1377297-1377316 | MS.gene050605:intron | 45.0% | |
ACTGCTTGAAGCAAGGTTAG+AGG | - | chr7.3:1377557-1377576 | MS.gene050605:CDS | 45.0% | |
AGAAAGCCTGTATCAGAAGC+TGG | - | chr7.3:1376636-1376655 | MS.gene050605:CDS | 45.0% | |
CAAGCATCAGTTGTTCAGCA+CGG | - | chr7.3:1375943-1375962 | MS.gene050605:CDS | 45.0% | |
CACAGCCTTGAACAGTTAGT+TGG | - | chr7.3:1377333-1377352 | MS.gene050605:intron | 45.0% | |
CACCAGAAAATGATAGGTGC+AGG | - | chr7.3:1377289-1377308 | MS.gene050605:intron | 45.0% | |
CATCGACGATAAATCCCTCA+TGG | + | chr7.3:1376190-1376209 | None:intergenic | 45.0% | |
CCCCTCCATTAAAGAAGTCA+AGG | - | chr7.3:1377029-1377048 | MS.gene050605:intron | 45.0% | |
GAATCCAATGAAGGTAGGCA+AGG | + | chr7.3:1377063-1377082 | None:intergenic | 45.0% | |
GAGAACCTTGACTAACTCTC+TGG | + | chr7.3:1376353-1376372 | None:intergenic | 45.0% | |
GAGGGACTACTATGACTATG+AGG | + | chr7.3:1375291-1375310 | None:intergenic | 45.0% | |
GCGGATAAGGATCGCATTAA+TGG | - | chr7.3:1376817-1376836 | MS.gene050605:intron | 45.0% | |
GCTTCCTCGGCAAAATTATG+AGG | + | chr7.3:1377114-1377133 | None:intergenic | 45.0% | |
GGACTACTATGACTATGAGG+AGG | + | chr7.3:1375288-1375307 | None:intergenic | 45.0% | |
GTACGTCAGCTCTCTTCATA+AGG | + | chr7.3:1375705-1375724 | None:intergenic | 45.0% | |
GTCATCCAGAGAGTTAGTCA+AGG | - | chr7.3:1376345-1376364 | MS.gene050605:intron | 45.0% | |
TATCGTCGATGATCCTTCTG+AGG | - | chr7.3:1376199-1376218 | MS.gene050605:CDS | 45.0% | |
TATGACTATGAGGAGGCTCA+TGG | + | chr7.3:1375281-1375300 | None:intergenic | 45.0% | |
TCAAGGTTCTCAAACGTAGC+CGG | - | chr7.3:1376362-1376381 | MS.gene050605:intron | 45.0% | |
TCTTCCCTGCAAATACTCTC+AGG | + | chr7.3:1377396-1377415 | None:intergenic | 45.0% | |
TGGCAAAACTGCTTGAAGCA+AGG | - | chr7.3:1377550-1377569 | MS.gene050605:CDS | 45.0% | |
! | CTGCACCTATCATTTTCTGG+TGG | + | chr7.3:1377291-1377310 | None:intergenic | 45.0% |
! | GTCCTGCACCTATCATTTTC+TGG | + | chr7.3:1377294-1377313 | None:intergenic | 45.0% |
!! | CAAGAAAAGTACCTGGTGAG+AGG | + | chr7.3:1375310-1375329 | None:intergenic | 45.0% |
!! | AAAAAAAAATTAATTGAAAA+TGG | + | chr7.3:1375341-1375360 | None:intergenic | 5.0% |
AGAAGAGAGGAGGAAGAGGA+AGG | - | chr7.3:1375112-1375131 | MS.gene050605:CDS | 50.0% | |
CACTAGCCAGCTTCTGATAC+AGG | + | chr7.3:1376645-1376664 | None:intergenic | 50.0% | |
CATCCTGTTCTTCAAGACGC+CGG | + | chr7.3:1376384-1376403 | None:intergenic | 50.0% | |
TCAACAAGTCTCCAAGTGGG+TGG | + | chr7.3:1375156-1375175 | None:intergenic | 50.0% | |
TCACCCTTGCCTACCTTCAT+TGG | - | chr7.3:1377056-1377075 | MS.gene050605:intron | 50.0% | |
TCATAGTAGTCCCTCTCACC+AGG | - | chr7.3:1375296-1375315 | MS.gene050605:CDS | 50.0% | |
TTGGAGAAGAGAGGAGGAAG+AGG | - | chr7.3:1375108-1375127 | MS.gene050605:CDS | 50.0% | |
! | AGCAGATGCTGGCTGTATTG+CGG | + | chr7.3:1375902-1375921 | None:intergenic | 50.0% |
ACAAGTCTCCAAGTGGGTGG+TGG | + | chr7.3:1375153-1375172 | None:intergenic | 55.0% | |
ATGAGGAGGCTCATGGTGGT+GGG | + | chr7.3:1375274-1375293 | None:intergenic | 55.0% | |
CTCGAGTCTCTAGCAGATGC+TGG | + | chr7.3:1375913-1375932 | None:intergenic | 55.0% | |
GACTATGAGGAGGCTCATGG+TGG | + | chr7.3:1375278-1375297 | None:intergenic | 55.0% | |
GGTACCAACGGAAGCTTCCT+CGG | + | chr7.3:1377127-1377146 | None:intergenic | 55.0% | |
GTTCAACACCACCACCCACT+TGG | - | chr7.3:1375142-1375161 | MS.gene050605:CDS | 55.0% | |
TAGCCGGCGTCTTGAAGAAC+AGG | - | chr7.3:1376378-1376397 | MS.gene050605:intron | 55.0% | |
TATGAGGAGGCTCATGGTGG+TGG | + | chr7.3:1375275-1375294 | None:intergenic | 55.0% | |
TTTGCCGAGGAAGCTTCCGT+TGG | - | chr7.3:1377120-1377139 | MS.gene050605:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 1375042 | 1377620 | 1375042 | ID=MS.gene050605 |
chr7.3 | mRNA | 1375042 | 1377620 | 1375042 | ID=MS.gene050605.t1;Parent=MS.gene050605 |
chr7.3 | exon | 1377345 | 1377620 | 1377345 | ID=MS.gene050605.t1.exon1;Parent=MS.gene050605.t1 |
chr7.3 | CDS | 1377345 | 1377620 | 1377345 | ID=cds.MS.gene050605.t1;Parent=MS.gene050605.t1 |
chr7.3 | exon | 1376627 | 1376752 | 1376627 | ID=MS.gene050605.t1.exon2;Parent=MS.gene050605.t1 |
chr7.3 | CDS | 1376627 | 1376752 | 1376627 | ID=cds.MS.gene050605.t1;Parent=MS.gene050605.t1 |
chr7.3 | exon | 1375042 | 1376328 | 1375042 | ID=MS.gene050605.t1.exon3;Parent=MS.gene050605.t1 |
chr7.3 | CDS | 1375042 | 1376328 | 1375042 | ID=cds.MS.gene050605.t1;Parent=MS.gene050605.t1 |
Gene Sequence |
Protein sequence |