AlfalfaGEDB | MS.gene22399

M. sativa cultivar XinJiangDaYe / MS.gene22399

KEGG: K00789
GO: GO:0000166 GO:0003674 GO:0003824 GO:0004478 GO:0005488 GO:0005524 GO:0006556 GO:0006732 GO:0006790 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009987 GO:0016740 GO:0016765 GO:0017076 GO:0017144 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0044237 GO:0044249 GO:0044272 GO:0046500 GO:0051186 GO:0051188 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576
PFAM: PF00438.23 PF02772.19 PF02773.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene22399.t1	XP_003625682.2	99.2	390	3	0	1	390	1	390	2.90E-225	790.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene22399.t1	P43282	94.9	390	20	0	1	390	1	390	2.2e-218	759.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene22399.t1	G7L3W1	99.2	390	3	0	1	390	1	390	2.1e-225	790.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051433	MS.gene22399	0.804245	2.37E-49	-1.69E-46
MS.gene051914	MS.gene22399	0.810813	9.56E-51	-1.69E-46
MS.gene052169	MS.gene22399	0.857261	1.84E-62	-1.69E-46
MS.gene052494	MS.gene22399	0.823326	1.47E-53	-1.69E-46
MS.gene053097	MS.gene22399	0.827696	1.36E-54	-1.69E-46
MS.gene053173	MS.gene22399	0.805435	1.34E-49	-1.69E-46
MS.gene054633	MS.gene22399	0.808064	3.72E-50	-1.69E-46
MS.gene054662	MS.gene22399	0.882317	1.15E-70	-1.69E-46
MS.gene055616	MS.gene22399	0.805266	1.45E-49	-1.69E-46
MS.gene057081	MS.gene22399	0.810455	1.14E-50	-1.69E-46
MS.gene05732	MS.gene22399	0.825038	5.83E-54	-1.69E-46
MS.gene057367	MS.gene22399	0.84258	2.37E-58	-1.69E-46
MS.gene05960	MS.gene22399	0.830281	3.21E-55	-1.69E-46
MS.gene060291	MS.gene22399	0.818991	1.47E-52	-1.69E-46
MS.gene06080	MS.gene22399	0.822623	2.15E-53	-1.69E-46
MS.gene06093	MS.gene22399	0.840735	7.27E-58	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	bit score
MS.gene22399.t1	MTR_7g102120	99.231	390	3	1	390	1	390	799
MS.gene22399.t1	MTR_1g063060	93.333	390	26	1	390	19	408	733
MS.gene22399.t1	MTR_1g063060	93.333	390	26	1	390	1	390	733
MS.gene22399.t1	MTR_2g046710	89.896	386	39	2	387	4	389	696
MS.gene22399.t1	MTR_7g110310	88.083	386	46	2	387	3	388	695
MS.gene22399.t1	MTR_4g123810	89.378	386	41	2	387	4	389	690

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	bit score
MS.gene22399.t1	AT2G36880	92.308	390	30	1	390	1	390	723
MS.gene22399.t1	AT2G36880	92.308	390	30	1	390	1	390	723
MS.gene22399.t1	AT3G17390	89.922	387	39	1	387	1	387	699
MS.gene22399.t1	AT1G02500	89.147	387	42	1	387	1	387	692
MS.gene22399.t1	AT1G02500	89.147	387	42	1	387	1	387	692
MS.gene22399.t1	AT4G01850	88.114	387	46	1	387	1	387	692
MS.gene22399.t1	AT4G01850	88.114	387	46	1	387	1	387	692

Find 102 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATCTGGTCGGTTTGTTAT+TGG	0.197743	7.3:-11414833	MS.gene22399:CDS
TCACATGCAACCTTACTTTC+TGG	0.212828	7.3:+11415427	None:intergenic
ACTGCTGCATATGGCCATTT+TGG	0.216793	7.3:-11414440	MS.gene22399:CDS
CGAGACACTTGCAGAGGAAT+TGG	0.296576	7.3:-11415325	MS.gene22399:CDS
ACTAACATGGTTATGGTCTT+TGG	0.303812	7.3:-11415391	MS.gene22399:CDS
CACATGCAACCTTACTTTCT+GGG	0.310592	7.3:+11415428	None:intergenic
GGCCATATGCAGCAGTCTTT+TGG	0.329152	7.3:+11414447	None:intergenic
ACCTGATCACACAGCTTGTC+GGG	0.335375	7.3:+11415487	None:intergenic
CATGGAGGAGGTGCCTTCTC+TGG	0.336553	7.3:-11414740	MS.gene22399:CDS
CCCTGAAGCTACCACACTTT+TGG	0.336878	7.3:+11414664	None:intergenic
CCATGGCTCCGTTATCATTC+TGG	0.342771	7.3:+11415005	None:intergenic
GCCAAAAGTGTGGTAGCTTC+AGG	0.346842	7.3:-11414665	MS.gene22399:CDS
AGATTATTGGAAATCATTCC+TGG	0.346876	7.3:+11414500	None:intergenic
TCAAAAGAGGTGGCAACTTC+AGG	0.361522	7.3:-11414472	MS.gene22399:CDS
CAGGATCATCCCATCCAAAA+TGG	0.362394	7.3:+11414426	None:intergenic
CCACTTCTATCGACCTTGGT+TGG	0.382632	7.3:+11414710	None:intergenic
GGCTGGGGTGCTCATGGAGG+AGG	0.385528	7.3:-11414752	MS.gene22399:CDS
CTCATAGTTCACAGTAGCCT+TGG	0.390492	7.3:+11415357	None:intergenic
AGCTTGCAAACTCAAGCCTT+TGG	0.392916	7.3:+11414371	None:intergenic
TGAACTCCTTGAGCGATATC+AGG	0.407674	7.3:+11415232	None:intergenic
CACTTCTATCGACCTTGGTT+GGG	0.408524	7.3:+11414711	None:intergenic
TATGGTGGCTGGGGTGCTCA+TGG	0.408565	7.3:-11414758	MS.gene22399:CDS
GTGCAGGTTTCTTATGCAAT+TGG	0.414240	7.3:-11414623	MS.gene22399:CDS
AATTCAAGACAAGGACATCT+TGG	0.414364	7.3:-11414552	MS.gene22399:CDS
TTTGTTGACACATACAAAAC+AGG	0.415934	7.3:-11414578	MS.gene22399:CDS
ACAGTCTCCCAGGTGAAATC+AGG	0.423808	7.3:+11414407	None:intergenic
TACAAAGACTAACATGGTTA+TGG	0.436292	7.3:-11415398	MS.gene22399:CDS
TGCAAGACGTTGCATTGTGC+AGG	0.438573	7.3:-11414639	MS.gene22399:CDS
CCCCGACAAGCTGTGTGATC+AGG	0.440463	7.3:-11415488	MS.gene22399:CDS
GATATCGCTCAAGGAGTTCA+TGG	0.445977	7.3:-11415229	MS.gene22399:CDS
GCAGCAAGACCCAGAAAGTA+AGG	0.446581	7.3:-11415437	MS.gene22399:CDS
ACAAAAGATGCGCATGGCTT+AGG	0.448424	7.3:-11415060	MS.gene22399:CDS
TCTGGTACTCAACAGTAACT+TGG	0.454448	7.3:+11415023	None:intergenic
TCTGGTCGGTTTGTTATTGG+TGG	0.458272	7.3:-11414830	MS.gene22399:CDS
GAAGTGGGGCATATATTGTT+AGG	0.460316	7.3:-11414694	MS.gene22399:CDS
GAGTATCTTGACAGTCTCCC+AGG	0.461385	7.3:+11414397	None:intergenic
TACCAAAAGACTGCTGCATA+TGG	0.464990	7.3:-11414449	MS.gene22399:CDS
ACAAATACAGAAAGTGGCTC+TGG	0.466173	7.3:+11414596	None:intergenic
TTTGTTATTGGTGGACCTCA+TGG	0.466434	7.3:-11414821	MS.gene22399:CDS
AGGACAGTGTGCACACGGAT+TGG	0.468164	7.3:+11414980	None:intergenic
TCACCAGCACCAATTTCCTC+TGG	0.468785	7.3:+11415190	None:intergenic
AACCTGATCACACAGCTTGT+CGG	0.469901	7.3:+11415486	None:intergenic
ATCTTCCATCTCAATCCATC+TGG	0.470979	7.3:-11414848	MS.gene22399:CDS
GGACAGTGTGCACACGGATT+GGG	0.473091	7.3:+11414981	None:intergenic
CCAAAAGTGTGGTAGCTTCA+GGG	0.478895	7.3:-11414664	MS.gene22399:CDS
TTATTGACACCTATGGTGGC+TGG	0.480591	7.3:-11414769	MS.gene22399:CDS
GGTGACCAAGGTCACATGTT+TGG	0.484772	7.3:-11415172	MS.gene22399:CDS
GGTTGGGTCCTTGCCAGAGA+AGG	0.492679	7.3:+11414727	None:intergenic
TATTGACACCTATGGTGGCT+GGG	0.497719	7.3:-11414768	MS.gene22399:CDS
GTGTCAACAAATACAGAAAG+TGG	0.512228	7.3:+11414590	None:intergenic
TGAGTAAGTGGCATTAGCTC+AGG	0.517740	7.3:+11415130	None:intergenic
CTGGTACTCAACAGTAACTT+GGG	0.520651	7.3:+11415024	None:intergenic
GGAAGATAGTCTTGTCATCA+AGG	0.520901	7.3:+11414864	None:intergenic
GGTGGACCTCATGGAGATGC+AGG	0.523297	7.3:-11414812	MS.gene22399:CDS
AAGATCATTATTGACACCTA+TGG	0.523504	7.3:-11414776	MS.gene22399:CDS
CATGGAGATGCAGGACTCAC+TGG	0.526918	7.3:-11414803	MS.gene22399:CDS
GGGATGATCCTGATTTCACC+TGG	0.533100	7.3:-11414415	MS.gene22399:CDS
AATAATCTTGACCTCAAAAG+AGG	0.536379	7.3:-11414485	MS.gene22399:CDS
GTAGCAAGCACATGAGTAAG+TGG	0.543954	7.3:+11415118	None:intergenic
TGCCCCACTTCTATCGACCT+TGG	0.546010	7.3:+11414706	None:intergenic
AAACCAGAGGAAATTGGTGC+TGG	0.551112	7.3:-11415193	MS.gene22399:CDS
CATGTGCTTGCTACTAAACT+CGG	0.555316	7.3:-11415109	MS.gene22399:CDS
TAGCTCAGGTGTTTCATCTG+TGG	0.560925	7.3:+11415144	None:intergenic
TGCGCATGGCTTAGGCCTGA+TGG	0.564382	7.3:-11415052	MS.gene22399:CDS
GGTGGCTGGGGTGCTCATGG+AGG	0.565014	7.3:-11414755	MS.gene22399:CDS
GAAATTGGTGCTGGTGACCA+AGG	0.570337	7.3:-11415184	MS.gene22399:CDS
GTTGAGTACCAGAATGATAA+CGG	0.575092	7.3:-11415013	MS.gene22399:CDS
ATGAGCACCCCAGCCACCAT+AGG	0.576048	7.3:+11414760	None:intergenic
CAAATACAGAAAGTGGCTCT+GGG	0.576109	7.3:+11414597	None:intergenic
TCCATCTCAATCCATCTGGT+CGG	0.577302	7.3:-11414844	MS.gene22399:CDS
CTGCAAACATGCATCAAGGA+TGG	0.580545	7.3:+11415456	None:intergenic
GTGCACACGGATTGGGACCA+TGG	0.581365	7.3:+11414988	None:intergenic
CATAGCCAAACATGTGACCT+TGG	0.582504	7.3:+11415167	None:intergenic
ATTGACACCTATGGTGGCTG+GGG	0.585915	7.3:-11414767	MS.gene22399:CDS
TGACAGATTCTGAGGTGAAG+AGG	0.586047	7.3:+11415521	None:intergenic
CAACCAAGGTCGATAGAAGT+GGG	0.589471	7.3:-11414709	MS.gene22399:CDS
AGGAGGTGCCTTCTCTGGCA+AGG	0.599631	7.3:-11414735	MS.gene22399:CDS
CCAACCAAGGTCGATAGAAG+TGG	0.601493	7.3:-11414710	MS.gene22399:CDS
ACCTTCGTTGACAGATTCTG+AGG	0.606247	7.3:+11415513	None:intergenic
ATCATTATTGACACCTATGG+TGG	0.611359	7.3:-11414773	MS.gene22399:CDS
CTTGCTGCAAACATGCATCA+AGG	0.611540	7.3:+11415452	None:intergenic
CCAATAACAAACCGACCAGA+TGG	0.611757	7.3:+11414833	None:intergenic
AGATGAGGACAGTGTGCACA+CGG	0.613951	7.3:+11414975	None:intergenic
CATCGTGCTGAGTTGAGATG+AGG	0.617276	7.3:+11414960	None:intergenic
ACCGACCAGATGGATTGAGA+TGG	0.617816	7.3:+11414843	None:intergenic
CCAGAATGATAACGGAGCCA+TGG	0.619445	7.3:-11415005	MS.gene22399:CDS
GGATTCGTATCAGCTGATGT+TGG	0.619951	7.3:-11415304	MS.gene22399:CDS
CAGAGTCCTGATATCGCTCA+AGG	0.622943	7.3:-11415238	MS.gene22399:CDS
AATCTTGACCTCAAAAGAGG+TGG	0.633225	7.3:-11414482	MS.gene22399:CDS
CTCTGGCAAGGACCCAACCA+AGG	0.634793	7.3:-11414723	MS.gene22399:CDS
GAAAGAACAAAAGATGCGCA+TGG	0.635098	7.3:-11415066	MS.gene22399:CDS
GAGATGCAGGACTCACTGGT+AGG	0.648576	7.3:-11414799	MS.gene22399:CDS
ACCTCAGAATCTGTCAACGA+AGG	0.652365	7.3:-11415514	MS.gene22399:CDS
CCTGATCACACAGCTTGTCG+GGG	0.668924	7.3:+11415488	None:intergenic
GGATGATCCTGATTTCACCT+GGG	0.670056	7.3:-11414414	MS.gene22399:CDS
TGTCAAGATACTCAAGCCAA+AGG	0.679722	7.3:-11414387	MS.gene22399:CDS
ATAGTTCGAGACACTTGCAG+AGG	0.698300	7.3:-11415331	MS.gene22399:CDS
AACCAAGGTCGATAGAAGTG+GGG	0.698373	7.3:-11414708	MS.gene22399:CDS
CTTTGGTGAGATAACAACCA+AGG	0.702167	7.3:-11415374	MS.gene22399:CDS
TAGGCAAGCAGCCAAAAGTG+TGG	0.702229	7.3:-11414675	MS.gene22399:CDS
GTGAGTCCTGCATCTCCATG+AGG	0.711004	7.3:+11414806	None:intergenic
GACATGTACAAAGACTAACA+TGG	0.784188	7.3:-11415404	MS.gene22399:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AACAGGAAAAATTCAAGACA+AGG	-	chr7.3:11415353-11415372	MS.gene22399:CDS	30.0%
	AAGATCATTATTGACACCTA+TGG	-	chr7.3:11415138-11415157	MS.gene22399:CDS	30.0%
	AATAATCTTGACCTCAAAAG+AGG	-	chr7.3:11415429-11415448	MS.gene22399:CDS	30.0%
	AGATTATTGGAAATCATTCC+TGG	+	chr7.3:11415417-11415436	None:intergenic	30.0%
	TACAAAGACTAACATGGTTA+TGG	-	chr7.3:11414516-11414535	MS.gene22399:CDS	30.0%
	TTTGTTGACACATACAAAAC+AGG	-	chr7.3:11415336-11415355	MS.gene22399:CDS	30.0%
!!!	TCTTTTGAGGTCAAGATTAT+TGG	+	chr7.3:11415430-11415449	None:intergenic	30.0%
!!!	TTAAAGAGCATTTTGACTTC+AGG	-	chr7.3:11415391-11415410	MS.gene22399:CDS	30.0%
	AATTCAAGACAAGGACATCT+TGG	-	chr7.3:11415362-11415381	MS.gene22399:CDS	35.0%
	ACCAAAAAACCAGAGGAAAT+TGG	-	chr7.3:11414715-11414734	MS.gene22399:CDS	35.0%
	ACTAACATGGTTATGGTCTT+TGG	-	chr7.3:11414523-11414542	MS.gene22399:CDS	35.0%
	ATCATTATTGACACCTATGG+TGG	-	chr7.3:11415141-11415160	MS.gene22399:CDS	35.0%
	GACATGTACAAAGACTAACA+TGG	-	chr7.3:11414510-11414529	MS.gene22399:CDS	35.0%
	GTGTCAACAAATACAGAAAG+TGG	+	chr7.3:11415327-11415346	None:intergenic	35.0%
	GTTGAGTACCAGAATGATAA+CGG	-	chr7.3:11414901-11414920	MS.gene22399:CDS	35.0%
!!	TGTCATCAAGGTATTTTGCT+GGG	+	chr7.3:11415041-11415060	None:intergenic	35.0%
!!	TTGTCATCAAGGTATTTTGC+TGG	+	chr7.3:11415042-11415061	None:intergenic	35.0%
!!!	ACCAATTTCCTCTGGTTTTT+TGG	+	chr7.3:11414719-11414738	None:intergenic	35.0%
	AATCTTGACCTCAAAAGAGG+TGG	-	chr7.3:11415432-11415451	MS.gene22399:CDS	40.0%
	ACAAATACAGAAAGTGGCTC+TGG	+	chr7.3:11415321-11415340	None:intergenic	40.0%
	ATCTTCCATCTCAATCCATC+TGG	-	chr7.3:11415066-11415085	MS.gene22399:CDS	40.0%
	CAAATACAGAAAGTGGCTCT+GGG	+	chr7.3:11415320-11415339	None:intergenic	40.0%
	CACATGCAACCTTACTTTCT+GGG	+	chr7.3:11414489-11414508	None:intergenic	40.0%
	CTGGTACTCAACAGTAACTT+GGG	+	chr7.3:11414893-11414912	None:intergenic	40.0%
	CTTTGGTGAGATAACAACCA+AGG	-	chr7.3:11414540-11414559	MS.gene22399:CDS	40.0%
	GAAAGAACAAAAGATGCGCA+TGG	-	chr7.3:11414848-11414867	MS.gene22399:CDS	40.0%
	GAAGTGGGGCATATATTGTT+AGG	-	chr7.3:11415220-11415239	MS.gene22399:CDS	40.0%
	GTGCAGGTTTCTTATGCAAT+TGG	-	chr7.3:11415291-11415310	MS.gene22399:CDS	40.0%
	TACCAAAAGACTGCTGCATA+TGG	-	chr7.3:11415465-11415484	MS.gene22399:CDS	40.0%
	TCACATGCAACCTTACTTTC+TGG	+	chr7.3:11414490-11414509	None:intergenic	40.0%
	TCACTTGACCAAAAAACCAG+AGG	-	chr7.3:11414708-11414727	MS.gene22399:CDS	40.0%
	TCTGGTACTCAACAGTAACT+TGG	+	chr7.3:11414894-11414913	None:intergenic	40.0%
	TGTCAAGATACTCAAGCCAA+AGG	-	chr7.3:11415527-11415546	MS.gene22399:CDS	40.0%
!	AGGTATTTTGCTGGGATAAC+AGG	+	chr7.3:11415033-11415052	None:intergenic	40.0%
!	CATGTGCTTGCTACTAAACT+CGG	-	chr7.3:11414805-11414824	MS.gene22399:CDS	40.0%
!	GTAACTTGGGTTTTACCATC+AGG	+	chr7.3:11414880-11414899	None:intergenic	40.0%
!!	GGAAGATAGTCTTGTCATCA+AGG	+	chr7.3:11415053-11415072	None:intergenic	40.0%
!!	TGCATATGGCCATTTTGGAT+GGG	-	chr7.3:11415479-11415498	MS.gene22399:CDS	40.0%
!!	TTTGTTATTGGTGGACCTCA+TGG	-	chr7.3:11415093-11415112	MS.gene22399:CDS	40.0%
	AAACCAGAGGAAATTGGTGC+TGG	-	chr7.3:11414721-11414740	MS.gene22399:CDS	45.0%
	AACCAAGGTCGATAGAAGTG+GGG	-	chr7.3:11415206-11415225	MS.gene22399:CDS	45.0%
	AACCTGATCACACAGCTTGT+CGG	+	chr7.3:11414431-11414450	None:intergenic	45.0%
	ACAAAAGATGCGCATGGCTT+AGG	-	chr7.3:11414854-11414873	MS.gene22399:CDS	45.0%
	ACCTCAGAATCTGTCAACGA+AGG	-	chr7.3:11414400-11414419	MS.gene22399:CDS	45.0%
	ACCTTCGTTGACAGATTCTG+AGG	+	chr7.3:11414404-11414423	None:intergenic	45.0%
	ATAGTTCGAGACACTTGCAG+AGG	-	chr7.3:11414583-11414602	MS.gene22399:CDS	45.0%
	CAACCAAGGTCGATAGAAGT+GGG	-	chr7.3:11415205-11415224	MS.gene22399:CDS	45.0%
	CACTTCTATCGACCTTGGTT+GGG	+	chr7.3:11415206-11415225	None:intergenic	45.0%
	CAGGATCATCCCATCCAAAA+TGG	+	chr7.3:11415491-11415510	None:intergenic	45.0%
	CATAGCCAAACATGTGACCT+TGG	+	chr7.3:11414750-11414769	None:intergenic	45.0%
	CCAATAACAAACCGACCAGA+TGG	+	chr7.3:11415084-11415103	None:intergenic	45.0%
	CTCATAGTTCACAGTAGCCT+TGG	+	chr7.3:11414560-11414579	None:intergenic	45.0%
	CTGCAAACATGCATCAAGGA+TGG	+	chr7.3:11414461-11414480	None:intergenic	45.0%
	CTTGCTGCAAACATGCATCA+AGG	+	chr7.3:11414465-11414484	None:intergenic	45.0%
	GATATCGCTCAAGGAGTTCA+TGG	-	chr7.3:11414685-11414704	MS.gene22399:CDS	45.0%
	GGATGATCCTGATTTCACCT+GGG	-	chr7.3:11415500-11415519	MS.gene22399:CDS	45.0%
	GGATTCGTATCAGCTGATGT+TGG	-	chr7.3:11414610-11414629	MS.gene22399:CDS	45.0%
	GTAGCAAGCACATGAGTAAG+TGG	+	chr7.3:11414799-11414818	None:intergenic	45.0%
	TAGCTCAGGTGTTTCATCTG+TGG	+	chr7.3:11414773-11414792	None:intergenic	45.0%
	TATTGACACCTATGGTGGCT+GGG	-	chr7.3:11415146-11415165	MS.gene22399:CDS	45.0%
	TCAAAAGAGGTGGCAACTTC+AGG	-	chr7.3:11415442-11415461	MS.gene22399:CDS	45.0%
	TCCATCTCAATCCATCTGGT+CGG	-	chr7.3:11415070-11415089	MS.gene22399:CDS	45.0%
	TGAACTCCTTGAGCGATATC+AGG	+	chr7.3:11414685-11414704	None:intergenic	45.0%
	TGAGTAAGTGGCATTAGCTC+AGG	+	chr7.3:11414787-11414806	None:intergenic	45.0%
	TTATTGACACCTATGGTGGC+TGG	-	chr7.3:11415145-11415164	MS.gene22399:CDS	45.0%
!	ACTGCTGCATATGGCCATTT+TGG	-	chr7.3:11415474-11415493	MS.gene22399:CDS	45.0%
!	CCAAAAGTGTGGTAGCTTCA+GGG	-	chr7.3:11415250-11415269	MS.gene22399:CDS	45.0%
!	TGAAGTTGCCACCTCTTTTG+AGG	+	chr7.3:11415443-11415462	None:intergenic	45.0%
!!	CCATCTGGTCGGTTTGTTAT+TGG	-	chr7.3:11415081-11415100	MS.gene22399:CDS	45.0%
!!	CTGCATATGGCCATTTTGGA+TGG	-	chr7.3:11415478-11415497	MS.gene22399:CDS	45.0%
!!	TCTGGTCGGTTTGTTATTGG+TGG	-	chr7.3:11415084-11415103	MS.gene22399:CDS	45.0%
!!	TGACAGATTCTGAGGTGAAG+AGG	+	chr7.3:11414396-11414415	None:intergenic	45.0%
	ACAGTCTCCCAGGTGAAATC+AGG	+	chr7.3:11415510-11415529	None:intergenic	50.0%
	ACCTGATCACACAGCTTGTC+GGG	+	chr7.3:11414430-11414449	None:intergenic	50.0%
	AGATGAGGACAGTGTGCACA+CGG	+	chr7.3:11414942-11414961	None:intergenic	50.0%
	ATTGACACCTATGGTGGCTG+GGG	-	chr7.3:11415147-11415166	MS.gene22399:CDS	50.0%
	CAGAGTCCTGATATCGCTCA+AGG	-	chr7.3:11414676-11414695	MS.gene22399:CDS	50.0%
	CCAACCAAGGTCGATAGAAG+TGG	-	chr7.3:11415204-11415223	MS.gene22399:CDS	50.0%
	CCACTTCTATCGACCTTGGT+TGG	+	chr7.3:11415207-11415226	None:intergenic	50.0%
	CCATGGCTCCGTTATCATTC+TGG	+	chr7.3:11414912-11414931	None:intergenic	50.0%
	CGAGACACTTGCAGAGGAAT+TGG	-	chr7.3:11414589-11414608	MS.gene22399:CDS	50.0%
	GAGTATCTTGACAGTCTCCC+AGG	+	chr7.3:11415520-11415539	None:intergenic	50.0%
	GCAGCAAGACCCAGAAAGTA+AGG	-	chr7.3:11414477-11414496	MS.gene22399:CDS	50.0%
	GGGATGATCCTGATTTCACC+TGG	-	chr7.3:11415499-11415518	MS.gene22399:CDS	50.0%
	GGTGACCAAGGTCACATGTT+TGG	-	chr7.3:11414742-11414761	MS.gene22399:CDS	50.0%
	TAGGCAAGCAGCCAAAAGTG+TGG	-	chr7.3:11415239-11415258	MS.gene22399:CDS	50.0%
	TCACCAGCACCAATTTCCTC+TGG	+	chr7.3:11414727-11414746	None:intergenic	50.0%
	TGCAAGACGTTGCATTGTGC+AGG	-	chr7.3:11415275-11415294	MS.gene22399:CDS	50.0%
!	CATCGTGCTGAGTTGAGATG+AGG	+	chr7.3:11414957-11414976	None:intergenic	50.0%
!	CCCTGAAGCTACCACACTTT+TGG	+	chr7.3:11415253-11415272	None:intergenic	50.0%
!	GCCAAAAGTGTGGTAGCTTC+AGG	-	chr7.3:11415249-11415268	MS.gene22399:CDS	50.0%
!	GGCCATATGCAGCAGTCTTT+TGG	+	chr7.3:11415470-11415489	None:intergenic	50.0%
!!	ACCGACCAGATGGATTGAGA+TGG	+	chr7.3:11415074-11415093	None:intergenic	50.0%
!!	CCAGAATGATAACGGAGCCA+TGG	-	chr7.3:11414909-11414928	MS.gene22399:CDS	50.0%
!!	GAAATTGGTGCTGGTGACCA+AGG	-	chr7.3:11414730-11414749	MS.gene22399:CDS	50.0%
!!!	GAGCATTTTGACTTCAGGCC+AGG	-	chr7.3:11415396-11415415	MS.gene22399:CDS	50.0%
	AGGACAGTGTGCACACGGAT+TGG	+	chr7.3:11414937-11414956	None:intergenic	55.0%
	CATGGAGATGCAGGACTCAC+TGG	-	chr7.3:11415111-11415130	MS.gene22399:CDS	55.0%
	CCTGATCACACAGCTTGTCG+GGG	+	chr7.3:11414429-11414448	None:intergenic	55.0%
	GAGATGCAGGACTCACTGGT+AGG	-	chr7.3:11415115-11415134	MS.gene22399:CDS	55.0%
	GGACAGTGTGCACACGGATT+GGG	+	chr7.3:11414936-11414955	None:intergenic	55.0%
	GTGAGTCCTGCATCTCCATG+AGG	+	chr7.3:11415111-11415130	None:intergenic	55.0%
	TGCCCCACTTCTATCGACCT+TGG	+	chr7.3:11415211-11415230	None:intergenic	55.0%
	ATGAGCACCCCAGCCACCAT+AGG	+	chr7.3:11415157-11415176	None:intergenic	60.0%
	CCCCGACAAGCTGTGTGATC+AGG	-	chr7.3:11414426-11414445	MS.gene22399:CDS	60.0%
	CTCTGGCAAGGACCCAACCA+AGG	-	chr7.3:11415191-11415210	MS.gene22399:CDS	60.0%
	GGTGGACCTCATGGAGATGC+AGG	-	chr7.3:11415102-11415121	MS.gene22399:CDS	60.0%
	GGTTGGGTCCTTGCCAGAGA+AGG	+	chr7.3:11415190-11415209	None:intergenic	60.0%
	TGCGCATGGCTTAGGCCTGA+TGG	-	chr7.3:11414862-11414881	MS.gene22399:CDS	60.0%
!	TATGGTGGCTGGGGTGCTCA+TGG	-	chr7.3:11415156-11415175	MS.gene22399:CDS	60.0%
!!	AGGAGGTGCCTTCTCTGGCA+AGG	-	chr7.3:11415179-11415198	MS.gene22399:CDS	60.0%
!!	CATGGAGGAGGTGCCTTCTC+TGG	-	chr7.3:11415174-11415193	MS.gene22399:CDS	60.0%
!!	GTGCACACGGATTGGGACCA+TGG	+	chr7.3:11414929-11414948	None:intergenic	60.0%
!	GGCTGGGGTGCTCATGGAGG+AGG	-	chr7.3:11415162-11415181	MS.gene22399:CDS	70.0%
!	GGTGGCTGGGGTGCTCATGG+AGG	-	chr7.3:11415159-11415178	MS.gene22399:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.3	gene	11414382	11415554	11414382	ID=MS.gene22399
chr7.3	mRNA	11414382	11415554	11414382	ID=MS.gene22399.t1;Parent=MS.gene22399
chr7.3	exon	11414382	11415554	11414382	ID=MS.gene22399.t1.exon1;Parent=MS.gene22399.t1
chr7.3	CDS	11414382	11415554	11414382	ID=cds.MS.gene22399.t1;Parent=MS.gene22399.t1

Gene Sequence

>MS.gene22399

ATGGAAACTTTCCTCTTCACCTCAGAATCTGTCAACGAAGGTCACCCCGACAAGCTGTGTGATCAGGTTTCAGATGCCATCCTTGATGCATGTTTGCAGCAAGACCCAGAAAGTAAGGTTGCATGTGAGACATGTACAAAGACTAACATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCTACTGTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGAATTGGATTCGTATCAGCTGATGTTGGTCTTGATGCTGATAACTGCAAAGTTCTTGTCAACATTGAGCAACAGAGTCCTGATATCGCTCAAGGAGTTCATGGTCACTTGACCAAAAAACCAGAGGAAATTGGTGCTGGTGACCAAGGTCACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTAATGCCACTTACTCATGTGCTTGCTACTAAACTCGGTGCAAAGCTCACTGAAGTTAGAAAGAACAAAAGATGCGCATGGCTTAGGCCTGATGGTAAAACCCAAGTTACTGTTGAGTACCAGAATGATAACGGAGCCATGGTCCCAATCCGTGTGCACACTGTCCTCATCTCAACTCAGCACGATGAAACTGTCACAAATGAAAAAATTGCTGCAGATTTAAAAGAGCATGTGATTAAACCTGTTATCCCAGCAAAATACCTTGATGACAAGACTATCTTCCATCTCAATCCATCTGGTCGGTTTGTTATTGGTGGACCTCATGGAGATGCAGGACTCACTGGTAGGAAGATCATTATTGACACCTATGGTGGCTGGGGTGCTCATGGAGGAGGTGCCTTCTCTGGCAAGGACCCAACCAAGGTCGATAGAAGTGGGGCATATATTGTTAGGCAAGCAGCCAAAAGTGTGGTAGCTTCAGGGCTTGCAAGACGTTGCATTGTGCAGGTTTCTTATGCAATTGGAGTCCCAGAGCCACTTTCTGTATTTGTTGACACATACAAAACAGGAAAAATTCAAGACAAGGACATCTTGGTTCTTATTAAAGAGCATTTTGACTTCAGGCCAGGAATGATTTCCAATAATCTTGACCTCAAAAGAGGTGGCAACTTCAGGTACCAAAAGACTGCTGCATATGGCCATTTTGGATGGGATGATCCTGATTTCACCTGGGAGACTGTCAAGATACTCAAGCCAAAGGCTTGA

Protein sequence

>MS.gene22399.t1

METFLFTSESVNEGHPDKLCDQVSDAILDACLQQDPESKVACETCTKTNMVMVFGEITTKATVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKRCAWLRPDGKTQVTVEYQNDNGAMVPIRVHTVLISTQHDETVTNEKIAADLKEHVIKPVIPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIQDKDILVLIKEHFDFRPGMISNNLDLKRGGNFRYQKTAAYGHFGWDDPDFTWETVKILKPKA