Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23771.t1 | AFK47528.1 | 90.8 | 326 | 24 | 1 | 1 | 326 | 1 | 320 | 9.00E-172 | 612.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23771.t1 | P36907 | 78.0 | 323 | 64 | 1 | 4 | 326 | 5 | 320 | 1.2e-153 | 543.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23771.t1 | G7LA76 | 90.8 | 326 | 24 | 1 | 1 | 326 | 1 | 320 | 6.5e-172 | 612.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050060 | MS.gene23771 | 0.807445 | 5.04E-50 | -1.69E-46 |
| MS.gene051980 | MS.gene23771 | 0.802094 | 6.60E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene23771 | 0.814061 | 1.87E-51 | -1.69E-46 |
| MS.gene052589 | MS.gene23771 | 0.838974 | 2.09E-57 | -1.69E-46 |
| MS.gene052590 | MS.gene23771 | 0.828983 | 6.64E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene23771 | 0.808925 | 2.44E-50 | -1.69E-46 |
| MS.gene054102 | MS.gene23771 | 0.853071 | 3.04E-61 | -1.69E-46 |
| MS.gene054110 | MS.gene23771 | 0.819843 | 9.39E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene23771 | 0.809451 | 1.88E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene23771 | 0.809411 | 1.92E-50 | -1.69E-46 |
| MS.gene056981 | MS.gene23771 | 0.807222 | 5.62E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene23771 | 0.818451 | 1.95E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene23771 | 0.826349 | 2.85E-54 | -1.69E-46 |
| MS.gene059011 | MS.gene23771 | 0.829244 | 5.74E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene23771 | 0.809501 | 1.83E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene23771 | 0.80079 | 1.22E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23771.t1 | MTR_8g074330 | 95.092 | 326 | 10 | 1 | 1 | 326 | 1 | 320 | 0.0 | 635 |
| MS.gene23771.t1 | MTR_8g074350 | 76.615 | 325 | 69 | 1 | 2 | 326 | 3 | 320 | 0.0 | 508 |
| MS.gene23771.t1 | MTR_8g074335 | 80.782 | 307 | 42 | 2 | 20 | 326 | 20 | 309 | 7.38e-175 | 487 |
| MS.gene23771.t1 | MTR_3g118390 | 61.656 | 326 | 106 | 2 | 1 | 325 | 59 | 366 | 2.69e-147 | 420 |
| MS.gene23771.t1 | MTR_7g110780 | 51.653 | 242 | 115 | 1 | 86 | 325 | 36 | 277 | 1.57e-90 | 271 |
| MS.gene23771.t1 | MTR_2g099470 | 38.080 | 323 | 143 | 11 | 1 | 319 | 13 | 282 | 4.34e-63 | 202 |
| MS.gene23771.t1 | MTR_7g021640 | 40.083 | 242 | 134 | 4 | 95 | 325 | 69 | 310 | 4.47e-55 | 182 |
| MS.gene23771.t1 | MTR_1g105535 | 38.843 | 242 | 137 | 4 | 95 | 325 | 72 | 313 | 3.37e-53 | 177 |
| MS.gene23771.t1 | MTR_2g034680 | 38.272 | 243 | 138 | 5 | 95 | 325 | 65 | 307 | 2.42e-52 | 175 |
| MS.gene23771.t1 | MTR_2g099465 | 38.023 | 263 | 122 | 9 | 61 | 319 | 29 | 254 | 4.86e-47 | 159 |
| MS.gene23771.t1 | MTR_7g115220 | 56.604 | 53 | 23 | 0 | 10 | 62 | 6 | 58 | 9.25e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23771.t1 | AT3G12500 | 65.147 | 307 | 93 | 3 | 22 | 326 | 33 | 327 | 1.72e-140 | 401 |
| MS.gene23771.t1 | AT4G01700 | 54.733 | 243 | 108 | 1 | 86 | 326 | 38 | 280 | 7.43e-100 | 295 |
| MS.gene23771.t1 | AT1G02360 | 52.675 | 243 | 113 | 1 | 86 | 326 | 30 | 272 | 6.37e-95 | 283 |
| MS.gene23771.t1 | AT1G02360 | 52.675 | 243 | 113 | 1 | 86 | 326 | 76 | 318 | 1.35e-94 | 283 |
| MS.gene23771.t1 | AT1G02360 | 52.675 | 243 | 113 | 1 | 86 | 326 | 82 | 324 | 1.52e-94 | 283 |
| MS.gene23771.t1 | AT2G43620 | 38.700 | 323 | 135 | 13 | 9 | 319 | 12 | 283 | 1.37e-61 | 198 |
| MS.gene23771.t1 | AT2G43610 | 39.252 | 321 | 134 | 13 | 9 | 319 | 12 | 281 | 2.03e-61 | 197 |
| MS.gene23771.t1 | AT3G54420 | 35.938 | 320 | 147 | 8 | 3 | 319 | 9 | 273 | 2.18e-59 | 192 |
| MS.gene23771.t1 | AT2G43590 | 36.721 | 305 | 128 | 11 | 19 | 319 | 21 | 264 | 2.45e-56 | 184 |
| MS.gene23771.t1 | AT1G05850 | 37.603 | 242 | 140 | 4 | 95 | 325 | 69 | 310 | 2.10e-55 | 183 |
| MS.gene23771.t1 | AT1G05850 | 37.603 | 242 | 140 | 4 | 95 | 325 | 69 | 310 | 2.10e-55 | 183 |
| MS.gene23771.t1 | AT2G43570 | 35.423 | 319 | 139 | 10 | 9 | 319 | 18 | 277 | 2.08e-52 | 174 |
| MS.gene23771.t1 | AT3G16920 | 36.508 | 252 | 148 | 5 | 86 | 325 | 68 | 319 | 6.60e-52 | 174 |
| MS.gene23771.t1 | AT3G16920 | 36.508 | 252 | 148 | 5 | 86 | 325 | 92 | 343 | 9.26e-52 | 175 |
| MS.gene23771.t1 | AT2G43580 | 33.448 | 290 | 136 | 10 | 34 | 319 | 29 | 265 | 3.39e-45 | 155 |
| MS.gene23771.t1 | AT2G43600 | 32.407 | 324 | 161 | 14 | 1 | 319 | 3 | 273 | 6.76e-39 | 139 |
| MS.gene23771.t1 | AT2G43600 | 32.407 | 324 | 161 | 14 | 1 | 319 | 24 | 294 | 2.08e-38 | 138 |
| MS.gene23771.t1 | AT1G56680 | 31.348 | 319 | 161 | 13 | 9 | 319 | 12 | 280 | 2.97e-38 | 137 |
| MS.gene23771.t1 | AT1G56680 | 31.348 | 319 | 161 | 13 | 9 | 319 | 35 | 303 | 5.88e-38 | 137 |
| MS.gene23771.t1 | AT3G47540 | 27.642 | 246 | 119 | 11 | 79 | 319 | 23 | 214 | 6.69e-20 | 87.0 |
| MS.gene23771.t1 | AT3G47540 | 26.337 | 243 | 120 | 11 | 79 | 316 | 23 | 211 | 1.84e-16 | 78.6 |
Find 106 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAAGGTATTGTCAAATAT+TGG | 0.173231 | 8.4:-30399336 | MS.gene23771:CDS |
| GTTTATTAAATCTTCATTAA+TGG | 0.182525 | 8.4:+30399601 | None:intergenic |
| GGGCTATGTTGTAGCAAATT+TGG | 0.190123 | 8.4:-30403647 | MS.gene23771:CDS |
| AGTGAACCCCGGTGATAATT+TGG | 0.206260 | 8.4:-30399312 | MS.gene23771:CDS |
| GGTGTTGGTGTTGGTGTTGA+TGG | 0.266040 | 8.4:+30403551 | None:intergenic |
| TCAAGACAGCTATATGGTTT+TGG | 0.289257 | 8.4:-30399541 | MS.gene23771:CDS |
| TCAGCTGCTGACAGCTCAGC+AGG | 0.291069 | 8.4:-30399458 | MS.gene23771:CDS |
| AAAAGGTATTGTCAAATATT+GGG | 0.316123 | 8.4:-30399335 | MS.gene23771:CDS |
| CCGACCCGATCCTCGACTTT+AGG | 0.318865 | 8.4:+30399365 | None:intergenic |
| GAGCCCGCCATTGATTATAT+TGG | 0.342820 | 8.4:+30399409 | None:intergenic |
| TTGCTACAACATAGCCCATT+TGG | 0.356076 | 8.4:+30403653 | None:intergenic |
| ATTGGTGATCACGCCGTATC+CGG | 0.356788 | 8.4:+30399427 | None:intergenic |
| GTTCACAGCAATTACAATTA+CGG | 0.372870 | 8.4:-30399638 | MS.gene23771:intron |
| TCAAGCCATGATGTGATTAC+TGG | 0.373764 | 8.4:-30399494 | MS.gene23771:CDS |
| TATCATTCAAGACAGCTATA+TGG | 0.380021 | 8.4:-30399547 | MS.gene23771:CDS |
| TCTTACTGAGTGAGTTGAAT+TGG | 0.382364 | 8.4:+30401084 | None:intergenic |
| TCGCTTAGGCAAATGGCCTT+TGG | 0.383815 | 8.4:+30399279 | None:intergenic |
| TGCTGACAGCTCAGCAGGGC+GGG | 0.391094 | 8.4:-30399453 | MS.gene23771:CDS |
| AATGGAGCTCTTTGTCCAAA+TGG | 0.398942 | 8.4:-30403668 | MS.gene23771:CDS |
| TTGATGGCTTGTTTGCTTGA+GGG | 0.404442 | 8.4:+30399513 | None:intergenic |
| AAGCAGCAAGTTCCTTCTTA+CGG | 0.405236 | 8.4:+30403348 | None:intergenic |
| AGCAGCAAGTTCCTTCTTAC+GGG | 0.405858 | 8.4:+30403349 | None:intergenic |
| GTAATCACATCATGGCTTGA+TGG | 0.406185 | 8.4:+30399497 | None:intergenic |
| AAGCAATATCCCCACGCATA+TGG | 0.409090 | 8.4:+30401192 | None:intergenic |
| AGCTCAGCAGGGCGGGTCCC+CGG | 0.425346 | 8.4:-30399446 | MS.gene23771:CDS |
| TTGGTGATCACGCCGTATCC+GGG | 0.425903 | 8.4:+30399428 | None:intergenic |
| CTTGATGGCTTGTTTGCTTG+AGG | 0.431719 | 8.4:+30399512 | None:intergenic |
| TCTCCACCACCACCTGTACT+AGG | 0.439639 | 8.4:+30403524 | None:intergenic |
| CTAGGTGTTGGTGTTGGTGT+TGG | 0.439688 | 8.4:+30403542 | None:intergenic |
| TGGCGAATATAAACCTATCT+TGG | 0.442917 | 8.4:-30403754 | MS.gene23771:CDS |
| GGTGTTGATGGTGTCGGTGT+TGG | 0.447435 | 8.4:+30403563 | None:intergenic |
| CGGGTGTACAAAAGTCTCCT+TGG | 0.447763 | 8.4:+30401151 | None:intergenic |
| TGATGGCTTGTTTGCTTGAG+GGG | 0.449557 | 8.4:+30399514 | None:intergenic |
| GCTCCTGGTAAAAGATACTA+TGG | 0.449925 | 8.4:-30401114 | MS.gene23771:CDS |
| CTGTCTTGAATGATACAGTT+GGG | 0.458496 | 8.4:+30399555 | None:intergenic |
| AGGAGCACATGGCCAATCTC+CGG | 0.459259 | 8.4:+30401131 | None:intergenic |
| GCAGGGCGGGTCCCCGGATA+CGG | 0.462018 | 8.4:-30399440 | MS.gene23771:CDS |
| GCTCGAATGCGGGAAAGGTC+AGG | 0.463433 | 8.4:-30399390 | MS.gene23771:CDS |
| TTTAATGGATTTGGTACCAC+TGG | 0.465473 | 8.4:-30403383 | MS.gene23771:CDS |
| CAGTTGGGTTTGTGGAGACT+AGG | 0.466628 | 8.4:+30399570 | None:intergenic |
| GGGTTTGTGGAGACTAGGTC+CGG | 0.468156 | 8.4:+30399575 | None:intergenic |
| GCTGAGCTGTCAGCAGCTGA+TGG | 0.470111 | 8.4:+30399461 | None:intergenic |
| AGGTACTTCGCTTAGGCAAA+TGG | 0.472357 | 8.4:+30399272 | None:intergenic |
| TCAATGGCGGGCTCGAATGC+GGG | 0.473463 | 8.4:-30399400 | MS.gene23771:CDS |
| AACATAGTATCAACCAAGAT+AGG | 0.474372 | 8.4:+30403741 | None:intergenic |
| TGAAGATTTAATAAACAATC+CGG | 0.474979 | 8.4:-30399594 | MS.gene23771:CDS |
| ACAGGTGGTGGTGGAGATGT+TGG | 0.475782 | 8.4:-30403518 | MS.gene23771:CDS |
| GGATCCTAAAGTCGAGGATC+GGG | 0.481097 | 8.4:-30399369 | MS.gene23771:CDS |
| CAATGTGGTAGTCAAGCTAA+TGG | 0.481274 | 8.4:-30403686 | MS.gene23771:CDS |
| GAATGATACAGTTGGGTTTG+TGG | 0.486901 | 8.4:+30399562 | None:intergenic |
| CCCCACGCATATGGACCGTC+TGG | 0.489862 | 8.4:+30401201 | None:intergenic |
| CGAAATGATCAGCGTTGTGC+TGG | 0.490425 | 8.4:-30403452 | MS.gene23771:CDS |
| ATGGAGCTCTTTGTCCAAAT+GGG | 0.497777 | 8.4:-30403667 | MS.gene23771:CDS |
| GGGTGTACAAAAGTCTCCTT+GGG | 0.500306 | 8.4:+30401152 | None:intergenic |
| ATCAATGGCGGGCTCGAATG+CGG | 0.502650 | 8.4:-30399401 | MS.gene23771:CDS |
| GGAGCACATGGCCAATCTCC+GGG | 0.508453 | 8.4:+30401132 | None:intergenic |
| TATGGACCGTCTGGTGCACT+TGG | 0.509398 | 8.4:+30401210 | None:intergenic |
| GGCGGGCTCGAATGCGGGAA+AGG | 0.510656 | 8.4:-30399395 | MS.gene23771:CDS |
| GGAGATTGGCCATGTGCTCC+TGG | 0.516012 | 8.4:-30401129 | MS.gene23771:CDS |
| ATATTGCTTTGTCACCGAAA+AGG | 0.520899 | 8.4:-30401178 | MS.gene23771:CDS |
| GTTACAATCCAAATTATCAC+CGG | 0.522554 | 8.4:+30399304 | None:intergenic |
| ATCTTCCAGTAATCACATCA+TGG | 0.525180 | 8.4:+30399489 | None:intergenic |
| ATTTGGATTGTAACAACCAA+AGG | 0.532242 | 8.4:-30399295 | MS.gene23771:CDS |
| GGTGTTGGTGTTGATGGTGT+CGG | 0.534137 | 8.4:+30403557 | None:intergenic |
| ATTTGATCAAACAAAGATGA+TGG | 0.537556 | 8.4:+30403485 | None:intergenic |
| GTGATCACCAATATAATCAA+TGG | 0.543450 | 8.4:-30399416 | MS.gene23771:CDS |
| CACCAGACGGTCCATATGCG+TGG | 0.545072 | 8.4:-30401203 | MS.gene23771:CDS |
| TGATGATGCCACCCGTAAGA+AGG | 0.549932 | 8.4:-30403360 | MS.gene23771:CDS |
| GCTGTCTTGAATGATACAGT+TGG | 0.551346 | 8.4:+30399554 | None:intergenic |
| CCACCACCTGTACTAGGTGT+TGG | 0.552714 | 8.4:+30403530 | None:intergenic |
| AGGATCCTAAAGTCGAGGAT+CGG | 0.553009 | 8.4:-30399370 | MS.gene23771:CDS |
| ATGATGTGATTACTGGAAGA+TGG | 0.555867 | 8.4:-30399487 | MS.gene23771:CDS |
| ACTGATCAATACTGTGGAGC+TGG | 0.559980 | 8.4:-30403611 | MS.gene23771:CDS |
| GATCAGCGTTGTGCTGGTCA+TGG | 0.565496 | 8.4:-30403446 | MS.gene23771:CDS |
| AATTACAATTACGGTCAAGC+GGG | 0.575378 | 8.4:-30399629 | MS.gene23771:CDS |
| ACACCTAGTACAGGTGGTGG+TGG | 0.583434 | 8.4:-30403527 | MS.gene23771:CDS |
| AGCAAGTTCCTTCTTACGGG+TGG | 0.585203 | 8.4:+30403352 | None:intergenic |
| CTGCTGACAGCTCAGCAGGG+CGG | 0.585439 | 8.4:-30399454 | MS.gene23771:CDS |
| CAAATATTGGGAGTGAACCC+CGG | 0.585803 | 8.4:-30399323 | MS.gene23771:CDS |
| ACCAGACGGTCCATATGCGT+GGG | 0.586591 | 8.4:-30401202 | MS.gene23771:CDS |
| CAGCTGCTGACAGCTCAGCA+GGG | 0.590641 | 8.4:-30399457 | MS.gene23771:CDS |
| GCTTTAGCTACAAGAAAGAG+AGG | 0.591082 | 8.4:+30403713 | None:intergenic |
| TTACAATCCAAATTATCACC+GGG | 0.600890 | 8.4:+30399305 | None:intergenic |
| GGTAAAAGATACTATGGCAG+AGG | 0.603766 | 8.4:-30401108 | MS.gene23771:CDS |
| CCTGTACTAGGTGTTGGTGT+TGG | 0.607097 | 8.4:+30403536 | None:intergenic |
| CAATTACAATTACGGTCAAG+CGG | 0.608754 | 8.4:-30399630 | MS.gene23771:CDS |
| TCACCAATATAATCAATGGC+GGG | 0.615650 | 8.4:-30399412 | MS.gene23771:CDS |
| CCAACACCAACACCTAGTAC+AGG | 0.616439 | 8.4:-30403536 | MS.gene23771:CDS |
| CAAACTTCTCATGAAACCAC+TGG | 0.618506 | 8.4:-30403317 | MS.gene23771:intron |
| ATCACCAATATAATCAATGG+CGG | 0.618901 | 8.4:-30399413 | MS.gene23771:CDS |
| TGGTGATCACGCCGTATCCG+GGG | 0.619248 | 8.4:+30399429 | None:intergenic |
| CCTAAAGTCGAGGATCGGGT+CGG | 0.630158 | 8.4:-30399365 | MS.gene23771:CDS |
| CCAACACCTAGTACAGGTGG+TGG | 0.640055 | 8.4:-30403530 | MS.gene23771:CDS |
| AAATCCATTAAAAGATCTAG+CGG | 0.646204 | 8.4:+30403394 | None:intergenic |
| GTCACCGAAAAGGATGCCCA+AGG | 0.648696 | 8.4:-30401168 | MS.gene23771:CDS |
| GTGTTGGAGAAGATTTACAT+TGG | 0.657553 | 8.4:+30403579 | None:intergenic |
| AGGTCAGGATCCTAAAGTCG+AGG | 0.659514 | 8.4:-30399375 | MS.gene23771:CDS |
| TTTATGGACATGCAGGAGGG+TGG | 0.659970 | 8.4:-30401233 | MS.gene23771:intron |
| GGGTGGCCAAGTGCACCAGA+CGG | 0.665375 | 8.4:-30401216 | MS.gene23771:CDS |
| ACACCAACACCTAGTACAGG+TGG | 0.675313 | 8.4:-30403533 | MS.gene23771:CDS |
| ACGGGTGGCATCATCACCAG+TGG | 0.693098 | 8.4:+30403367 | None:intergenic |
| CCAGACGGTCCATATGCGTG+GGG | 0.699989 | 8.4:-30401201 | MS.gene23771:CDS |
| TACAATCCAAATTATCACCG+GGG | 0.731031 | 8.4:+30399306 | None:intergenic |
| GGTAGCACTGATCAATACTG+TGG | 0.734247 | 8.4:-30403617 | MS.gene23771:CDS |
| GTAGCTAAAGCAGAACAATG+TGG | 0.744595 | 8.4:-30403701 | MS.gene23771:CDS |
| GGCAGCAATGAAACCATCGT+AGG | 0.758983 | 8.4:+30403415 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATATTTACCATTTA+TGG | + | chr8.4:30403140-30403159 | None:intergenic | 10.0% |
| !!! | CAAAATTCATTAAATATTTT+AGG | + | chr8.4:30401427-30401446 | None:intergenic | 10.0% |
| !!! | CTAAAATATTTAATGAATTT+TGG | - | chr8.4:30401425-30401444 | MS.gene23771:intron | 10.0% |
| !!! | CTATTTTTTATTTAGATAAT+TGG | - | chr8.4:30399757-30399776 | MS.gene23771:intron | 10.0% |
| !!! | TATAAATTCAGTTTTTTTTA+GGG | - | chr8.4:30401462-30401481 | MS.gene23771:intron | 10.0% |
| !!! | TTATAAATTCAGTTTTTTTT+AGG | - | chr8.4:30401461-30401480 | MS.gene23771:intron | 10.0% |
| !! | ACATATTAATTAACTTAAGT+AGG | - | chr8.4:30400812-30400831 | MS.gene23771:intron | 15.0% |
| !! | ATAAAATTAACTGATGTTTA+TGG | - | chr8.4:30401789-30401808 | MS.gene23771:intron | 15.0% |
| !! | ATTTAATTATAATGAGAGAA+AGG | - | chr8.4:30399838-30399857 | MS.gene23771:intron | 15.0% |
| !! | GTTTATTAAATCTTCATTAA+TGG | + | chr8.4:30403440-30403459 | None:intergenic | 15.0% |
| !! | TCAAGTTAAATATATTAAAG+TGG | + | chr8.4:30400558-30400577 | None:intergenic | 15.0% |
| !!! | ATTAATTTTCAATCTCTAAA+AGG | - | chr8.4:30403166-30403185 | MS.gene23771:intron | 15.0% |
| !!! | ATTGATAATAATGCTTAAAA+AGG | + | chr8.4:30402947-30402966 | None:intergenic | 15.0% |
| !!! | TTTTTGCTAATAGAAATTTA+GGG | - | chr8.4:30401205-30401224 | MS.gene23771:CDS | 15.0% |
| !!! | TTTTTTGCTAATAGAAATTT+AGG | - | chr8.4:30401204-30401223 | MS.gene23771:CDS | 15.0% |
| !! | AACAAAAATCACATGTATTA+GGG | - | chr8.4:30403020-30403039 | MS.gene23771:intron | 20.0% |
| !! | ACTGAATTTATAAATCTGTA+CGG | + | chr8.4:30401454-30401473 | None:intergenic | 20.0% |
| !! | ATATAAAATCTTCATTGTCT+AGG | + | chr8.4:30401250-30401269 | None:intergenic | 20.0% |
| !! | TAACAAAAATCACATGTATT+AGG | - | chr8.4:30403019-30403038 | MS.gene23771:intron | 20.0% |
| !! | TAGTAAAAAACATGTATGTT+TGG | + | chr8.4:30401334-30401353 | None:intergenic | 20.0% |
| !! | TATAATTAAAATACGCTCAA+AGG | - | chr8.4:30402387-30402406 | MS.gene23771:intron | 20.0% |
| !! | TCTAATTCGATTAGATAAAA+TGG | + | chr8.4:30401130-30401149 | None:intergenic | 20.0% |
| !! | TGAAGATTTAATAAACAATC+CGG | - | chr8.4:30403444-30403463 | MS.gene23771:CDS | 20.0% |
| !! | TGTGTAAGATTAATTTACTT+GGG | + | chr8.4:30400391-30400410 | None:intergenic | 20.0% |
| !! | TTGTGTAAGATTAATTTACT+TGG | + | chr8.4:30400392-30400411 | None:intergenic | 20.0% |
| !!! | AAAAGGTATTGTCAAATATT+GGG | - | chr8.4:30403703-30403722 | MS.gene23771:CDS | 20.0% |
| !!! | GATAATTTTTTTTTTGGTAG+TGG | + | chr8.4:30400055-30400074 | None:intergenic | 20.0% |
| !!! | GTATTTTAATTATAAGTCAG+TGG | + | chr8.4:30402381-30402400 | None:intergenic | 20.0% |
| !!! | TAAAAGGTATTGTCAAATAT+TGG | - | chr8.4:30403702-30403721 | MS.gene23771:CDS | 20.0% |
| !!! | TGGTTATAGTTTGTTTTTTT+TGG | + | chr8.4:30400235-30400254 | None:intergenic | 20.0% |
| !!! | TTGATCTCTCTTTTTTTTTA+GGG | - | chr8.4:30401509-30401528 | MS.gene23771:intron | 20.0% |
| !!! | TTGTGACAATATTTAACTTA+TGG | - | chr8.4:30403325-30403344 | MS.gene23771:CDS | 20.0% |
| !!! | TTTATGACTATTTTTTATGC+TGG | - | chr8.4:30403294-30403313 | MS.gene23771:intron | 20.0% |
| ! | AAATCCATTAAAAGATCTAG+CGG | + | chr8.4:30399647-30399666 | None:intergenic | 25.0% |
| ! | AACTGTATTCTATGTAAAGT+AGG | + | chr8.4:30399788-30399807 | None:intergenic | 25.0% |
| ! | AATTAGTAGGAAGAATATAC+TGG | + | chr8.4:30401004-30401023 | None:intergenic | 25.0% |
| ! | ACCAAAAAAGATAAAATGGT+GGG | + | chr8.4:30401041-30401060 | None:intergenic | 25.0% |
| ! | ATAATGAGAGAAAGGAAAAA+TGG | - | chr8.4:30399846-30399865 | MS.gene23771:intron | 25.0% |
| ! | ATTAGTAGGAAGAATATACT+GGG | + | chr8.4:30401003-30401022 | None:intergenic | 25.0% |
| ! | ATTCGATTAGATAAAATGGT+TGG | + | chr8.4:30401126-30401145 | None:intergenic | 25.0% |
| ! | ATTTGATCAAACAAAGATGA+TGG | + | chr8.4:30399556-30399575 | None:intergenic | 25.0% |
| ! | GATGTTCTTATAAAGAATGA+CGG | + | chr8.4:30402999-30403018 | None:intergenic | 25.0% |
| ! | TCATATCATATGTGATTCAT+TGG | - | chr8.4:30400449-30400468 | MS.gene23771:intron | 25.0% |
| ! | TTTCTCAAAGCATAATAACA+TGG | + | chr8.4:30402026-30402045 | None:intergenic | 25.0% |
| !! | AGTAGGTTGAAAAAAAAAGT+AGG | - | chr8.4:30400829-30400848 | MS.gene23771:intron | 25.0% |
| !! | CTTTTCCTTAGCTATATTAA+TGG | - | chr8.4:30402219-30402238 | MS.gene23771:intron | 25.0% |
| !! | TAATTAGCTTCACAATTAGT+AGG | + | chr8.4:30401017-30401036 | None:intergenic | 25.0% |
| !! | TCAGTTAATTTTATGCTCTA+TGG | + | chr8.4:30401783-30401802 | None:intergenic | 25.0% |
| !!! | AACATGGTTAGATTTTTAGA+TGG | + | chr8.4:30402010-30402029 | None:intergenic | 25.0% |
| !!! | ATTACTTTTTTTTTGGGTAG+TGG | + | chr8.4:30400304-30400323 | None:intergenic | 25.0% |
| !!! | CATTTTAAGGATTCCATAAA+TGG | - | chr8.4:30403124-30403143 | MS.gene23771:intron | 25.0% |
| !!! | CCATTTTTAGAACAACTTTT+AGG | - | chr8.4:30402060-30402079 | MS.gene23771:intron | 25.0% |
| !!! | CCTAAAAGTTGTTCTAAAAA+TGG | + | chr8.4:30402063-30402082 | None:intergenic | 25.0% |
| !!! | CTTGATCTCTCTTTTTTTTT+AGG | - | chr8.4:30401508-30401527 | MS.gene23771:intron | 25.0% |
| !!! | TAGTTTGTTTTTTTTGGTAG+TGG | + | chr8.4:30400229-30400248 | None:intergenic | 25.0% |
| !!! | TGATCTCTCTTTTTTTTTAG+GGG | - | chr8.4:30401510-30401529 | MS.gene23771:intron | 25.0% |
| !!! | TGTCTTTAGAACACATTTTA+AGG | - | chr8.4:30403111-30403130 | MS.gene23771:intron | 25.0% |
| AAATAGAGAGAGAAAAAGAG+AGG | - | chr8.4:30402110-30402129 | MS.gene23771:intron | 30.0% | |
| AAATCGTATTCCCTGTTAAT+CGG | - | chr8.4:30400976-30400995 | MS.gene23771:intron | 30.0% | |
| AACATAGTATCAACCAAGAT+AGG | + | chr8.4:30399300-30399319 | None:intergenic | 30.0% | |
| AATTGTAATTGCTGTGAACA+AGG | + | chr8.4:30403399-30403418 | None:intergenic | 30.0% | |
| ACATAAAAGAGAAAGCTTAG+AGG | - | chr8.4:30402491-30402510 | MS.gene23771:intron | 30.0% | |
| ACCATCCATTAATATAGCTA+AGG | + | chr8.4:30402227-30402246 | None:intergenic | 30.0% | |
| ACCTCATATAAACTTCAAGA+GGG | + | chr8.4:30402783-30402802 | None:intergenic | 30.0% | |
| ATCACCAATATAATCAATGG+CGG | - | chr8.4:30403625-30403644 | MS.gene23771:CDS | 30.0% | |
| ATTGTAATTGCTGTGAACAA+GGG | + | chr8.4:30403398-30403417 | None:intergenic | 30.0% | |
| ATTTAGTCTGTGTCAAGTTT+AGG | + | chr8.4:30400960-30400979 | None:intergenic | 30.0% | |
| ATTTGGATTGTAACAACCAA+AGG | - | chr8.4:30403743-30403762 | MS.gene23771:CDS | 30.0% | |
| CACCAAAAAAGATAAAATGG+TGG | + | chr8.4:30401042-30401061 | None:intergenic | 30.0% | |
| CACCACCAAAAAAGATAAAA+TGG | + | chr8.4:30401045-30401064 | None:intergenic | 30.0% | |
| CATAAAATATACAAGGTCTG+GGG | - | chr8.4:30399990-30400009 | MS.gene23771:intron | 30.0% | |
| GACAACGCATAAAATATACA+AGG | - | chr8.4:30399983-30400002 | MS.gene23771:intron | 30.0% | |
| GATTAGATAAAATGGTTGGT+TGG | + | chr8.4:30401122-30401141 | None:intergenic | 30.0% | |
| GCATAAAATATACAAGGTCT+GGG | - | chr8.4:30399989-30400008 | MS.gene23771:intron | 30.0% | |
| GTGATCACCAATATAATCAA+TGG | - | chr8.4:30403622-30403641 | MS.gene23771:CDS | 30.0% | |
| GTTACAATCCAAATTATCAC+CGG | + | chr8.4:30403737-30403756 | None:intergenic | 30.0% | |
| GTTCACAGCAATTACAATTA+CGG | - | chr8.4:30403400-30403419 | MS.gene23771:CDS | 30.0% | |
| TAGAATAACGAATATACCAG+TGG | + | chr8.4:30399740-30399759 | None:intergenic | 30.0% | |
| TATCATTCAAGACAGCTATA+TGG | - | chr8.4:30403491-30403510 | MS.gene23771:CDS | 30.0% | |
| TCCTTAGCTATATTAATGGA+TGG | - | chr8.4:30402223-30402242 | MS.gene23771:intron | 30.0% | |
| TCTCAATTTGCAAACAAACT+CGG | + | chr8.4:30400701-30400720 | None:intergenic | 30.0% | |
| TTACAATCCAAATTATCACC+GGG | + | chr8.4:30403736-30403755 | None:intergenic | 30.0% | |
| ! | AAAAAGTAGGTCGACTTAAT+AGG | - | chr8.4:30400842-30400861 | MS.gene23771:intron | 30.0% |
| ! | ACCCACCATTTTATCTTTTT+TGG | - | chr8.4:30401037-30401056 | MS.gene23771:intron | 30.0% |
| ! | ACTCATTGGTTATAGTTTGT+TGG | + | chr8.4:30400086-30400105 | None:intergenic | 30.0% |
| ! | ACTGTTTTATAGTGCTTTAG+TGG | - | chr8.4:30403356-30403375 | MS.gene23771:CDS | 30.0% |
| ! | AGCTTTCTCTTTTATGTCAT+TGG | + | chr8.4:30402488-30402507 | None:intergenic | 30.0% |
| ! | ATGTGTGAGTGTTACTATAT+GGG | - | chr8.4:30403075-30403094 | MS.gene23771:intron | 30.0% |
| ! | CATGTATTAGGGAAAGTTTT+AGG | - | chr8.4:30403031-30403050 | MS.gene23771:intron | 30.0% |
| ! | GTTTGATTGTTTGAAATCCT+AGG | + | chr8.4:30401988-30402007 | None:intergenic | 30.0% |
| ! | TATGTGTGAGTGTTACTATA+TGG | - | chr8.4:30403074-30403093 | MS.gene23771:intron | 30.0% |
| ! | TTCTTATAAAGAATGACGGA+GGG | + | chr8.4:30402995-30403014 | None:intergenic | 30.0% |
| !! | AGAAATTTAGGGTATTGAGA+TGG | - | chr8.4:30401216-30401235 | MS.gene23771:CDS | 30.0% |
| !! | CTTAAAAAGGTGTCATCTAA+TGG | + | chr8.4:30402934-30402953 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTTTGGTAGTGGC+CGG | + | chr8.4:30400051-30400070 | None:intergenic | 30.0% |
| !!! | CACCATTTTATCTTTTTTGG+TGG | - | chr8.4:30401040-30401059 | MS.gene23771:intron | 30.0% |
| !!! | GCTAGATCTTTTAATGGATT+TGG | - | chr8.4:30399646-30399665 | MS.gene23771:intron | 30.0% |
| !!! | TATCTTTTTTGGTGGTGTTT+GGG | - | chr8.4:30401048-30401067 | MS.gene23771:intron | 30.0% |
| !!! | TGTAGCAAATTTGGTTTTTG+TGG | - | chr8.4:30399400-30399419 | MS.gene23771:CDS | 30.0% |
| !!! | TTATCTTTTTTGGTGGTGTT+TGG | - | chr8.4:30401047-30401066 | MS.gene23771:intron | 30.0% |
| AAAATGGAGCACAAACTCAT+TGG | + | chr8.4:30400100-30400119 | None:intergenic | 35.0% | |
| AAAGGTAGTTAACTGTCGTT+GGG | - | chr8.4:30402405-30402424 | MS.gene23771:intron | 35.0% | |
| AAATACTAAAATACCCCCAG+CGG | - | chr8.4:30402345-30402364 | MS.gene23771:intron | 35.0% | |
| AACCCACATGAAGTGTATAT+TGG | + | chr8.4:30402271-30402290 | None:intergenic | 35.0% | |
| AAGTTTATATGAGGTGGATG+GGG | - | chr8.4:30402788-30402807 | MS.gene23771:intron | 35.0% | |
| AATCGTATTCCCTGTTAATC+GGG | - | chr8.4:30400977-30400996 | MS.gene23771:intron | 35.0% | |
| AATTACAATTACGGTCAAGC+GGG | - | chr8.4:30403409-30403428 | MS.gene23771:CDS | 35.0% | |
| ACCCTCTTGAAGTTTATATG+AGG | - | chr8.4:30402779-30402798 | MS.gene23771:intron | 35.0% | |
| AGAGTGAGATTACAATGAGA+AGG | - | chr8.4:30402623-30402642 | MS.gene23771:intron | 35.0% | |
| ATATTGCTTTGTCACCGAAA+AGG | - | chr8.4:30401860-30401879 | MS.gene23771:intron | 35.0% | |
| ATCTTCCAGTAATCACATCA+TGG | + | chr8.4:30403552-30403571 | None:intergenic | 35.0% | |
| ATGAAGTGTATATTGGTGGA+TGG | + | chr8.4:30402264-30402283 | None:intergenic | 35.0% | |
| ATGATGTGATTACTGGAAGA+TGG | - | chr8.4:30403551-30403570 | MS.gene23771:CDS | 35.0% | |
| ATTAAGGGAGAGAAGATGAT+TGG | - | chr8.4:30402861-30402880 | MS.gene23771:intron | 35.0% | |
| CAATTACAATTACGGTCAAG+CGG | - | chr8.4:30403408-30403427 | MS.gene23771:CDS | 35.0% | |
| CACACACACATTTACTAACT+CGG | + | chr8.4:30402139-30402158 | None:intergenic | 35.0% | |
| CACCAATATACACTTCATGT+GGG | - | chr8.4:30402266-30402285 | MS.gene23771:intron | 35.0% | |
| CACCTCATATAAACTTCAAG+AGG | + | chr8.4:30402784-30402803 | None:intergenic | 35.0% | |
| CGCATAAAATATACAAGGTC+TGG | - | chr8.4:30399988-30400007 | MS.gene23771:intron | 35.0% | |
| CTCTTGAAGTTTATATGAGG+TGG | - | chr8.4:30402782-30402801 | MS.gene23771:intron | 35.0% | |
| CTGTCTTGAATGATACAGTT+GGG | + | chr8.4:30403486-30403505 | None:intergenic | 35.0% | |
| CTTGTGTTTCCAAGACATAT+TGG | - | chr8.4:30402443-30402462 | MS.gene23771:intron | 35.0% | |
| GAAGTTTATATGAGGTGGAT+GGG | - | chr8.4:30402787-30402806 | MS.gene23771:intron | 35.0% | |
| GAGAAGATGATTGGATTGAA+CGG | - | chr8.4:30402870-30402889 | MS.gene23771:intron | 35.0% | |
| GTGTTGGAGAAGATTTACAT+TGG | + | chr8.4:30399462-30399481 | None:intergenic | 35.0% | |
| GTTCTTATAAAGAATGACGG+AGG | + | chr8.4:30402996-30403015 | None:intergenic | 35.0% | |
| TACAATCCAAATTATCACCG+GGG | + | chr8.4:30403735-30403754 | None:intergenic | 35.0% | |
| TATCAACTGAGTTAAGCTCA+CGG | - | chr8.4:30401093-30401112 | MS.gene23771:CDS | 35.0% | |
| TCACCAATATAATCAATGGC+GGG | - | chr8.4:30403626-30403645 | MS.gene23771:CDS | 35.0% | |
| TCAGTAAGATTCTTTCACCT+AGG | - | chr8.4:30401968-30401987 | MS.gene23771:intron | 35.0% | |
| TCATCACTTGATACCAAACA+TGG | - | chr8.4:30402821-30402840 | MS.gene23771:intron | 35.0% | |
| TGAAGTTTATATGAGGTGGA+TGG | - | chr8.4:30402786-30402805 | MS.gene23771:intron | 35.0% | |
| TGGCGAATATAAACCTATCT+TGG | - | chr8.4:30399284-30399303 | MS.gene23771:CDS | 35.0% | |
| TTCTGACATCCAATATGTCT+TGG | + | chr8.4:30402455-30402474 | None:intergenic | 35.0% | |
| ! | ATCGGGTCGGATTTTATAAA+AGG | - | chr8.4:30403686-30403705 | MS.gene23771:CDS | 35.0% |
| ! | CATGGATTTTATACCTACGA+TGG | - | chr8.4:30399610-30399629 | MS.gene23771:CDS | 35.0% |
| ! | CTCAAGCTTCTTTTCATCAT+TGG | + | chr8.4:30400488-30400507 | None:intergenic | 35.0% |
| ! | TCAAGACAGCTATATGGTTT+TGG | - | chr8.4:30403497-30403516 | MS.gene23771:CDS | 35.0% |
| ! | TCTTACTGAGTGAGTTGAAT+TGG | + | chr8.4:30401957-30401976 | None:intergenic | 35.0% |
| ! | TGAAGTGTATATTGGTGGAT+GGG | + | chr8.4:30402263-30402282 | None:intergenic | 35.0% |
| ! | TGAGCTTAACTCAGTTGATA+AGG | + | chr8.4:30401093-30401112 | None:intergenic | 35.0% |
| !! | ATAGTTTGTTGGCGTATAAG+TGG | + | chr8.4:30400162-30400181 | None:intergenic | 35.0% |
| !! | TTTAATGGATTTGGTACCAC+TGG | - | chr8.4:30399655-30399674 | MS.gene23771:intron | 35.0% |
| !!! | ATCTTTTTTGGTGGTGTTTG+GGG | - | chr8.4:30401049-30401068 | MS.gene23771:intron | 35.0% |
| !!! | TTGTTTTTTTTGGTAGTGGC+CGG | + | chr8.4:30400225-30400244 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTGGTAGTGGCC+GGG | + | chr8.4:30400050-30400069 | None:intergenic | 35.0% |
| AAGCAGCAAGTTCCTTCTTA+CGG | + | chr8.4:30399693-30399712 | None:intergenic | 40.0% | |
| AATGGAGCTCTTTGTCCAAA+TGG | - | chr8.4:30399370-30399389 | MS.gene23771:CDS | 40.0% | |
| ACATGTATGTTTGGACTCAG+AGG | + | chr8.4:30401325-30401344 | None:intergenic | 40.0% | |
| ACTGATGTTTATGGACATGC+AGG | - | chr8.4:30401798-30401817 | MS.gene23771:intron | 40.0% | |
| AGAGTGGGAGGAGAAATTAA+GGG | - | chr8.4:30402846-30402865 | MS.gene23771:intron | 40.0% | |
| AGATGATTGGATTGAACGGA+TGG | - | chr8.4:30402874-30402893 | MS.gene23771:intron | 40.0% | |
| ATACCAAACATGGAGAGAGT+GGG | - | chr8.4:30402831-30402850 | MS.gene23771:intron | 40.0% | |
| ATCAACTGAGTTAAGCTCAC+GGG | - | chr8.4:30401094-30401113 | MS.gene23771:CDS | 40.0% | |
| ATGATTGGATTGAACGGATG+GGG | - | chr8.4:30402876-30402895 | MS.gene23771:intron | 40.0% | |
| ATGGAGCTCTTTGTCCAAAT+GGG | - | chr8.4:30399371-30399390 | MS.gene23771:CDS | 40.0% | |
| ATGTTTATGGACATGCAGGA+GGG | - | chr8.4:30401802-30401821 | MS.gene23771:intron | 40.0% | |
| CAAACTTCTCATGAAACCAC+TGG | - | chr8.4:30399721-30399740 | MS.gene23771:intron | 40.0% | |
| CAAAGGTAGTTAACTGTCGT+TGG | - | chr8.4:30402404-30402423 | MS.gene23771:intron | 40.0% | |
| CAATGTGGTAGTCAAGCTAA+TGG | - | chr8.4:30399352-30399371 | MS.gene23771:CDS | 40.0% | |
| CATGTATGTTTGGACTCAGA+GGG | + | chr8.4:30401324-30401343 | None:intergenic | 40.0% | |
| CCACATGAAGTGTATATTGG+TGG | + | chr8.4:30402268-30402287 | None:intergenic | 40.0% | |
| CCACCAATATACACTTCATG+TGG | - | chr8.4:30402265-30402284 | MS.gene23771:intron | 40.0% | |
| CTTGGGACAAAGCTTCAAAA+TGG | + | chr8.4:30400374-30400393 | None:intergenic | 40.0% | |
| GAATGATACAGTTGGGTTTG+TGG | + | chr8.4:30403479-30403498 | None:intergenic | 40.0% | |
| GATGATTGGATTGAACGGAT+GGG | - | chr8.4:30402875-30402894 | MS.gene23771:intron | 40.0% | |
| GCTCCTGGTAAAAGATACTA+TGG | - | chr8.4:30401924-30401943 | MS.gene23771:intron | 40.0% | |
| GCTGTCTTGAATGATACAGT+TGG | + | chr8.4:30403487-30403506 | None:intergenic | 40.0% | |
| GCTTTAGCTACAAGAAAGAG+AGG | + | chr8.4:30399328-30399347 | None:intergenic | 40.0% | |
| GGGCTATGTTGTAGCAAATT+TGG | - | chr8.4:30399391-30399410 | MS.gene23771:CDS | 40.0% | |
| GGGTTTGAAGAGCTTCAAAA+TGG | + | chr8.4:30400116-30400135 | None:intergenic | 40.0% | |
| GGTAAAAGATACTATGGCAG+AGG | - | chr8.4:30401930-30401949 | MS.gene23771:intron | 40.0% | |
| GTAATCACATCATGGCTTGA+TGG | + | chr8.4:30403544-30403563 | None:intergenic | 40.0% | |
| GTAGCTAAAGCAGAACAATG+TGG | - | chr8.4:30399337-30399356 | MS.gene23771:CDS | 40.0% | |
| TCAAGCCATGATGTGATTAC+TGG | - | chr8.4:30403544-30403563 | MS.gene23771:CDS | 40.0% | |
| TTGCTACAACATAGCCCATT+TGG | + | chr8.4:30399388-30399407 | None:intergenic | 40.0% | |
| ! | ACACTTTTGTCGGTAAGTGT+CGG | - | chr8.4:30401671-30401690 | MS.gene23771:intron | 40.0% |
| ! | CCATGAAACCACACTTTTGT+CGG | - | chr8.4:30401661-30401680 | MS.gene23771:intron | 40.0% |
| ! | CTGCCATAGTATCTTTTACC+AGG | + | chr8.4:30401930-30401949 | None:intergenic | 40.0% |
| ! | TGAGTTTAGCTCAGTTGGTT+GGG | - | chr8.4:30399961-30399980 | MS.gene23771:intron | 40.0% |
| !! | TAGGGTATTGAGATGGACTA+GGG | - | chr8.4:30401223-30401242 | MS.gene23771:intron | 40.0% |
| !! | TATCTTTTACCAGGAGCACA+TGG | + | chr8.4:30401921-30401940 | None:intergenic | 40.0% |
| !! | TTAGGGTATTGAGATGGACT+AGG | - | chr8.4:30401222-30401241 | MS.gene23771:intron | 40.0% |
| !! | TTGATGGCTTGTTTGCTTGA+GGG | + | chr8.4:30403528-30403547 | None:intergenic | 40.0% |
| !!! | GAAGGAACTTGCTGCTTTTT+TGG | - | chr8.4:30399696-30399715 | MS.gene23771:intron | 40.0% |
| !!! | TGTTTTTTTTGGTAGTGGCC+GGG | + | chr8.4:30400224-30400243 | None:intergenic | 40.0% |
| !!! | TTTTGAAGCTCTTCAAACCC+CGG | - | chr8.4:30400116-30400135 | MS.gene23771:intron | 40.0% |
| !!! | TTTTTTTTTGGTAGTGGCCG+GGG | + | chr8.4:30400049-30400068 | None:intergenic | 40.0% |
| AAGCAATATCCCCACGCATA+TGG | + | chr8.4:30401849-30401868 | None:intergenic | 45.0% | |
| ACTGATCAATACTGTGGAGC+TGG | - | chr8.4:30399427-30399446 | MS.gene23771:CDS | 45.0% | |
| AGAATATACCTCCCTCCGAA+AGG | - | chr8.4:30401277-30401296 | MS.gene23771:intron | 45.0% | |
| AGCAGCAAGTTCCTTCTTAC+GGG | + | chr8.4:30399692-30399711 | None:intergenic | 45.0% | |
| AGGATCCTAAAGTCGAGGAT+CGG | - | chr8.4:30403668-30403687 | MS.gene23771:CDS | 45.0% | |
| AGTGAACCCCGGTGATAATT+TGG | - | chr8.4:30403726-30403745 | MS.gene23771:CDS | 45.0% | |
| AGTGGTAGTTAACTACCGCT+GGG | + | chr8.4:30402363-30402382 | None:intergenic | 45.0% | |
| ATATACTGGGCCCGATTAAC+AGG | + | chr8.4:30400990-30401009 | None:intergenic | 45.0% | |
| CAAATATTGGGAGTGAACCC+CGG | - | chr8.4:30403715-30403734 | MS.gene23771:CDS | 45.0% | |
| GACACTTACCGACAAAAGTG+TGG | + | chr8.4:30401672-30401691 | None:intergenic | 45.0% | |
| GAGAAATCAAGAGAGAGAGG+GGG | + | chr8.4:30402730-30402749 | None:intergenic | 45.0% | |
| GAGAGTGGGAGGAGAAATTA+AGG | - | chr8.4:30402845-30402864 | MS.gene23771:intron | 45.0% | |
| GATACCAAACATGGAGAGAG+TGG | - | chr8.4:30402830-30402849 | MS.gene23771:intron | 45.0% | |
| GATGTTTATGGACATGCAGG+AGG | - | chr8.4:30401801-30401820 | MS.gene23771:intron | 45.0% | |
| GGAGAAATCAAGAGAGAGAG+GGG | + | chr8.4:30402731-30402750 | None:intergenic | 45.0% | |
| GGGAGAAATCAAGAGAGAGA+GGG | + | chr8.4:30402732-30402751 | None:intergenic | 45.0% | |
| GGGTGTACAAAAGTCTCCTT+GGG | + | chr8.4:30401889-30401908 | None:intergenic | 45.0% | |
| GGGTTGGATGGACAAGAAAT+AGG | + | chr8.4:30402704-30402723 | None:intergenic | 45.0% | |
| TATACTGGGCCCGATTAACA+GGG | + | chr8.4:30400989-30401008 | None:intergenic | 45.0% | |
| TCAACTGAGTTAAGCTCACG+GGG | - | chr8.4:30401095-30401114 | MS.gene23771:CDS | 45.0% | |
| TTTGTTGGCGTATAAGTGGC+CGG | + | chr8.4:30400158-30400177 | None:intergenic | 45.0% | |
| ! | ACTTTTGTACACCCGGAGAT+TGG | - | chr8.4:30401895-30401914 | MS.gene23771:intron | 45.0% |
| ! | CAAGGAGACTTTTGTACACC+CGG | - | chr8.4:30401888-30401907 | MS.gene23771:intron | 45.0% |
| ! | CCGACAAAAGTGTGGTTTCA+TGG | + | chr8.4:30401664-30401683 | None:intergenic | 45.0% |
| ! | GAGCCCGCCATTGATTATAT+TGG | + | chr8.4:30403632-30403651 | None:intergenic | 45.0% |
| ! | GCTGCCGCTAGATCTTTTAA+TGG | - | chr8.4:30399640-30399659 | MS.gene23771:intron | 45.0% |
| ! | GTGAGTTTAGCTCAGTTGGT+TGG | - | chr8.4:30399960-30399979 | MS.gene23771:intron | 45.0% |
| !! | CTTGATGGCTTGTTTGCTTG+AGG | + | chr8.4:30403529-30403548 | None:intergenic | 45.0% |
| !! | GGTAGCACTGATCAATACTG+TGG | - | chr8.4:30399421-30399440 | MS.gene23771:CDS | 45.0% |
| !! | TGATGGCTTGTTTGCTTGAG+GGG | + | chr8.4:30403527-30403546 | None:intergenic | 45.0% |
| !!! | GTTTTTTTTGGTAGTGGCCG+GGG | + | chr8.4:30400223-30400242 | None:intergenic | 45.0% |
| !!! | TTTTTTTTGGGTAGTGGCCG+CGG | + | chr8.4:30400298-30400317 | None:intergenic | 45.0% |
| !! | ATATTATTTATTAAAAACAA+AGG | + | chr8.4:30401163-30401182 | None:intergenic | 5.0% |
| !! | TATTATTTATTAAAAACAAA+GGG | + | chr8.4:30401162-30401181 | None:intergenic | 5.0% |
| !!! | AAATATAAATATTTTTTTAG+AGG | - | chr8.4:30400764-30400783 | MS.gene23771:intron | 5.0% |
| !!! | AATTATATTACTTTTTTTTT+GGG | + | chr8.4:30400310-30400329 | None:intergenic | 5.0% |
| !!! | AATTATTTTATGATAATTTT+TGG | + | chr8.4:30402176-30402195 | None:intergenic | 5.0% |
| !!! | TAATTATATTACTTTTTTTT+TGG | + | chr8.4:30400311-30400330 | None:intergenic | 5.0% |
| !!! | TATTAAGATAATTTTTTTTT+TGG | + | chr8.4:30400061-30400080 | None:intergenic | 5.0% |
| ACACCAACACCTAGTACAGG+TGG | - | chr8.4:30399505-30399524 | MS.gene23771:CDS | 50.0% | |
| AGCAAGTTCCTTCTTACGGG+TGG | + | chr8.4:30399689-30399708 | None:intergenic | 50.0% | |
| AGGTCAGGATCCTAAAGTCG+AGG | - | chr8.4:30403663-30403682 | MS.gene23771:CDS | 50.0% | |
| ATTCCCACCAAGAGAGAGAG+AGG | + | chr8.4:30402754-30402773 | None:intergenic | 50.0% | |
| CAGTGGTAGTTAACTACCGC+TGG | + | chr8.4:30402364-30402383 | None:intergenic | 50.0% | |
| CAGTTGGGTTTGTGGAGACT+AGG | + | chr8.4:30403471-30403490 | None:intergenic | 50.0% | |
| CCAACACCAACACCTAGTAC+AGG | - | chr8.4:30399502-30399521 | MS.gene23771:CDS | 50.0% | |
| CCAACTGAGCTAAACTCACG+AGG | + | chr8.4:30399959-30399978 | None:intergenic | 50.0% | |
| CGAAATGATCAGCGTTGTGC+TGG | - | chr8.4:30399586-30399605 | MS.gene23771:CDS | 50.0% | |
| CGGGTGTACAAAAGTCTCCT+TGG | + | chr8.4:30401890-30401909 | None:intergenic | 50.0% | |
| GGATCCTAAAGTCGAGGATC+GGG | - | chr8.4:30403669-30403688 | MS.gene23771:CDS | 50.0% | |
| GGCAGCAATGAAACCATCGT+AGG | + | chr8.4:30399626-30399645 | None:intergenic | 50.0% | |
| GGGGAGAAATCAAGAGAGAG+AGG | + | chr8.4:30402733-30402752 | None:intergenic | 50.0% | |
| GGTTTGAACCCCAGAAGTAG+TGG | + | chr8.4:30400028-30400047 | None:intergenic | 50.0% | |
| GTGGTAGTTAACTACCGCTG+GGG | + | chr8.4:30402362-30402381 | None:intergenic | 50.0% | |
| GTTCGAGCCTAGCTACCTTT+CGG | + | chr8.4:30401295-30401314 | None:intergenic | 50.0% | |
| GTTTGGACTCAGAGGGTTCT+CGG | + | chr8.4:30401317-30401336 | None:intergenic | 50.0% | |
| TGGTAGTTAACTACCGCTGG+GGG | + | chr8.4:30402361-30402380 | None:intergenic | 50.0% | |
| TTCCCACCAAGAGAGAGAGA+GGG | + | chr8.4:30402753-30402772 | None:intergenic | 50.0% | |
| TTGTTGGCGTATAAGTGGCC+GGG | + | chr8.4:30400157-30400176 | None:intergenic | 50.0% | |
| TTTATGGACATGCAGGAGGG+TGG | - | chr8.4:30401805-30401824 | MS.gene23771:intron | 50.0% | |
| TTTCTCCCCTCTCTCTCTCT+TGG | - | chr8.4:30402744-30402763 | MS.gene23771:intron | 50.0% | |
| ! | ATTGGTGATCACGCCGTATC+CGG | + | chr8.4:30403614-30403633 | None:intergenic | 50.0% |
| ! | CCTCGTGAGTTTAGCTCAGT+TGG | - | chr8.4:30399956-30399975 | MS.gene23771:intron | 50.0% |
| ! | GTCTCCTTGGGCATCCTTTT+CGG | + | chr8.4:30401877-30401896 | None:intergenic | 50.0% |
| ! | TGATGATGCCACCCGTAAGA+AGG | - | chr8.4:30399678-30399697 | MS.gene23771:intron | 50.0% |
| !! | CCTGTACTAGGTGTTGGTGT+TGG | + | chr8.4:30399505-30399524 | None:intergenic | 50.0% |
| !! | CTAGGTGTTGGTGTTGGTGT+TGG | + | chr8.4:30399499-30399518 | None:intergenic | 50.0% |
| !! | GGTGTTGGTGTTGATGGTGT+CGG | + | chr8.4:30399484-30399503 | None:intergenic | 50.0% |
| !! | GGTGTTGGTGTTGGTGTTGA+TGG | + | chr8.4:30399490-30399509 | None:intergenic | 50.0% |
| !! | TACTTCTGGGGTTCAAACCC+CGG | - | chr8.4:30400029-30400048 | MS.gene23771:intron | 50.0% |
| !!! | TTTTTTTGGGTAGTGGCCGC+GGG | + | chr8.4:30400297-30400316 | None:intergenic | 50.0% |
| AAACCCCGGCCACTACTTCT+GGG | - | chr8.4:30400016-30400035 | MS.gene23771:intron | 55.0% | |
| ACCAGACGGTCCATATGCGT+GGG | - | chr8.4:30401836-30401855 | MS.gene23771:intron | 55.0% | |
| ATCAAGAGAGAGAGGGGGTG+TGG | + | chr8.4:30402725-30402744 | None:intergenic | 55.0% | |
| CCAAACATGGAGAGAGTGGG+AGG | - | chr8.4:30402834-30402853 | MS.gene23771:intron | 55.0% | |
| CCAACACCTAGTACAGGTGG+TGG | - | chr8.4:30399508-30399527 | MS.gene23771:CDS | 55.0% | |
| CCACCACCTGTACTAGGTGT+TGG | + | chr8.4:30399511-30399530 | None:intergenic | 55.0% | |
| CCTAAAGTCGAGGATCGGGT+CGG | - | chr8.4:30403673-30403692 | MS.gene23771:CDS | 55.0% | |
| CCTCCCACTCTCTCCATGTT+TGG | + | chr8.4:30402837-30402856 | None:intergenic | 55.0% | |
| GAGCCTAGCTACCTTTCGGA+GGG | + | chr8.4:30401291-30401310 | None:intergenic | 55.0% | |
| GGGTTTGTGGAGACTAGGTC+CGG | + | chr8.4:30403466-30403485 | None:intergenic | 55.0% | |
| GTCACCGAAAAGGATGCCCA+AGG | - | chr8.4:30401870-30401889 | MS.gene23771:intron | 55.0% | |
| TATGGACCGTCTGGTGCACT+TGG | + | chr8.4:30401831-30401850 | None:intergenic | 55.0% | |
| TCCCACCAAGAGAGAGAGAG+GGG | + | chr8.4:30402752-30402771 | None:intergenic | 55.0% | |
| TCCCCTCTCTCTCTCTTGGT+GGG | - | chr8.4:30402748-30402767 | MS.gene23771:intron | 55.0% | |
| TCTCCACCACCACCTGTACT+AGG | + | chr8.4:30399517-30399536 | None:intergenic | 55.0% | |
| TGAACCCCAGAAGTAGTGGC+CGG | + | chr8.4:30400024-30400043 | None:intergenic | 55.0% | |
| TGTTGGCGTATAAGTGGCCG+GGG | + | chr8.4:30400156-30400175 | None:intergenic | 55.0% | |
| ! | AAGGTCTGGGGTTCAAACCC+CGG | - | chr8.4:30400002-30400021 | MS.gene23771:intron | 55.0% |
| ! | ACACCTAGTACAGGTGGTGG+TGG | - | chr8.4:30399511-30399530 | MS.gene23771:CDS | 55.0% |
| ! | AGGAGCACATGGCCAATCTC+CGG | + | chr8.4:30401910-30401929 | None:intergenic | 55.0% |
| ! | GATCAGCGTTGTGCTGGTCA+TGG | - | chr8.4:30399592-30399611 | MS.gene23771:CDS | 55.0% |
| ! | TCAAGAGAGAGAGGGGGTGT+GGG | + | chr8.4:30402724-30402743 | None:intergenic | 55.0% |
| ! | TTGGTGATCACGCCGTATCC+GGG | + | chr8.4:30403613-30403632 | None:intergenic | 55.0% |
| !! | ACAGGTGGTGGTGGAGATGT+TGG | - | chr8.4:30399520-30399539 | MS.gene23771:CDS | 55.0% |
| !! | ATCAATGGCGGGCTCGAATG+CGG | - | chr8.4:30403637-30403656 | MS.gene23771:CDS | 55.0% |
| !! | GGTGTTGATGGTGTCGGTGT+TGG | + | chr8.4:30399478-30399497 | None:intergenic | 55.0% |
| AACCCCAGAAGTAGTGGCCG+GGG | + | chr8.4:30400022-30400041 | None:intergenic | 60.0% | |
| AACCCCGGCCACTACTTCTG+GGG | - | chr8.4:30400017-30400036 | MS.gene23771:intron | 60.0% | |
| ACGGGTGGCATCATCACCAG+TGG | + | chr8.4:30399674-30399693 | None:intergenic | 60.0% | |
| CAAACCCCGGCCACTACTTC+TGG | - | chr8.4:30400015-30400034 | MS.gene23771:intron | 60.0% | |
| CACCAGACGGTCCATATGCG+TGG | - | chr8.4:30401835-30401854 | MS.gene23771:intron | 60.0% | |
| CAGCTGCTGACAGCTCAGCA+GGG | - | chr8.4:30403581-30403600 | MS.gene23771:CDS | 60.0% | |
| CCAGACGGTCCATATGCGTG+GGG | - | chr8.4:30401837-30401856 | MS.gene23771:intron | 60.0% | |
| CCGACCCGATCCTCGACTTT+AGG | + | chr8.4:30403676-30403695 | None:intergenic | 60.0% | |
| CCTAGCTACCTTTCGGAGGG+AGG | + | chr8.4:30401288-30401307 | None:intergenic | 60.0% | |
| CCTCCCTCCGAAAGGTAGCT+AGG | - | chr8.4:30401285-30401304 | MS.gene23771:intron | 60.0% | |
| CGAGCCTAGCTACCTTTCGG+AGG | + | chr8.4:30401292-30401311 | None:intergenic | 60.0% | |
| CGGCCAAGCTCTTCAAACCC+CGG | - | chr8.4:30400136-30400155 | MS.gene23771:intron | 60.0% | |
| CGGGGTTTGAAGAGCTTGGC+CGG | + | chr8.4:30400138-30400157 | None:intergenic | 60.0% | |
| CTCCCCTCTCTCTCTCTTGG+TGG | - | chr8.4:30402747-30402766 | MS.gene23771:intron | 60.0% | |
| GAACCCCAGAAGTAGTGGCC+GGG | + | chr8.4:30400023-30400042 | None:intergenic | 60.0% | |
| GCTCGAATGCGGGAAAGGTC+AGG | - | chr8.4:30403648-30403667 | MS.gene23771:CDS | 60.0% | |
| GCTGAGCTGTCAGCAGCTGA+TGG | + | chr8.4:30403580-30403599 | None:intergenic | 60.0% | |
| GGAGCACATGGCCAATCTCC+GGG | + | chr8.4:30401909-30401928 | None:intergenic | 60.0% | |
| GGGGTTTGAAGAGCTTGGCC+GGG | + | chr8.4:30400137-30400156 | None:intergenic | 60.0% | |
| GGGTTTGAAGAGCTTGGCCG+GGG | + | chr8.4:30400136-30400155 | None:intergenic | 60.0% | |
| TCAGCTGCTGACAGCTCAGC+AGG | - | chr8.4:30403580-30403599 | MS.gene23771:CDS | 60.0% | |
| TGGCCGGGGTTTGAAGAGCT+TGG | + | chr8.4:30400122-30400141 | None:intergenic | 60.0% | |
| TGGTGATCACGCCGTATCCG+GGG | + | chr8.4:30403612-30403631 | None:intergenic | 60.0% | |
| ! | GGAGATTGGCCATGTGCTCC+TGG | - | chr8.4:30401909-30401928 | MS.gene23771:intron | 60.0% |
| !! | TCAATGGCGGGCTCGAATGC+GGG | - | chr8.4:30403638-30403657 | MS.gene23771:CDS | 60.0% |
| CCCCACGCATATGGACCGTC+TGG | + | chr8.4:30401840-30401859 | None:intergenic | 65.0% | |
| CTGCTGACAGCTCAGCAGGG+CGG | - | chr8.4:30403584-30403603 | MS.gene23771:CDS | 65.0% | |
| GGGTGGCCAAGTGCACCAGA+CGG | - | chr8.4:30401822-30401841 | MS.gene23771:intron | 65.0% | |
| TGCTGACAGCTCAGCAGGGC+GGG | - | chr8.4:30403585-30403604 | MS.gene23771:CDS | 65.0% | |
| ! | GAGAGAGAGGGGGTGTGGGT+TGG | + | chr8.4:30402720-30402739 | None:intergenic | 65.0% |
| !! | GAGAGGGGGTGTGGGTTGGA+TGG | + | chr8.4:30402716-30402735 | None:intergenic | 65.0% |
| GCTCTTCAAACCCCGGCCCG+CGG | - | chr8.4:30400278-30400297 | MS.gene23771:intron | 70.0% | |
| ! | GGCGGGCTCGAATGCGGGAA+AGG | - | chr8.4:30403643-30403662 | MS.gene23771:CDS | 70.0% |
| ! | TTTGGGTAGTGGCCGCGGGC+CGG | + | chr8.4:30400293-30400312 | None:intergenic | 70.0% |
| AGCTCAGCAGGGCGGGTCCC+CGG | - | chr8.4:30403592-30403611 | MS.gene23771:CDS | 75.0% | |
| GCAGGGCGGGTCCCCGGATA+CGG | - | chr8.4:30403598-30403617 | MS.gene23771:CDS | 75.0% | |
| ! | TTGGGTAGTGGCCGCGGGCC+GGG | + | chr8.4:30400292-30400311 | None:intergenic | 75.0% |
| !! | TGGGTAGTGGCCGCGGGCCG+GGG | + | chr8.4:30400291-30400310 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 30399283 | 30403777 | 30399283 | ID=MS.gene23771 |
| chr8.4 | mRNA | 30399283 | 30403777 | 30399283 | ID=MS.gene23771.t1;Parent=MS.gene23771 |
| chr8.4 | exon | 30403318 | 30403777 | 30403318 | ID=MS.gene23771.t1.exon1;Parent=MS.gene23771.t1 |
| chr8.4 | CDS | 30403318 | 30403777 | 30403318 | ID=cds.MS.gene23771.t1;Parent=MS.gene23771.t1 |
| chr8.4 | exon | 30401090 | 30401240 | 30401090 | ID=MS.gene23771.t1.exon2;Parent=MS.gene23771.t1 |
| chr8.4 | CDS | 30401090 | 30401240 | 30401090 | ID=cds.MS.gene23771.t1;Parent=MS.gene23771.t1 |
| chr8.4 | exon | 30399283 | 30399652 | 30399283 | ID=MS.gene23771.t1.exon3;Parent=MS.gene23771.t1 |
| chr8.4 | CDS | 30399283 | 30399652 | 30399283 | ID=cds.MS.gene23771.t1;Parent=MS.gene23771.t1 |
| Gene Sequence |
| Protein sequence |
