AlfalfaGEDB | MS.gene051980

M. sativa cultivar XinJiangDaYe / MS.gene051980

KEGG: K01183
GO: GO:0003674 GO:0003824 GO:0004553 GO:0004568 GO:0005488 GO:0005975 GO:0006022 GO:0006026 GO:0006030 GO:0006032 GO:0006040 GO:0006807 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0016798 GO:0016998 GO:0017144 GO:0042737 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0046348 GO:0071704 GO:0097367 GO:1901071 GO:1901072 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575
PFAM: PF00182.22 PF00187.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051980.t1	XP_024632584.1	91.2	260	22	1	4	262	19	278	6.40E-128	466.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051980.t1	P27054	75.3	263	58	3	1	262	14	270	5.5e-104	378.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051980.t1	A0A396JDD8	91.7	254	20	1	10	262	10	263	1.3e-125	458.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051980	MS.gene052589	0.829503	4.96E-55	-1.69E-46
MS.gene051980	MS.gene056514	0.80454	2.06E-49	-1.69E-46
MS.gene051980	MS.gene056981	0.955746	1.49E-113	-1.69E-46
MS.gene051980	MS.gene070915	0.807438	5.05E-50	-1.69E-46
MS.gene051980	MS.gene23771	0.802094	6.60E-49	-1.69E-46
MS.gene051980	MS.gene28687	0.832842	7.51E-56	-1.69E-46
MS.gene051980	MS.gene28690	0.846198	2.52E-59	-1.69E-46
MS.gene051980	MS.gene29623	0.815908	7.27E-52	-1.69E-46
MS.gene051980	MS.gene31794	0.801496	8.76E-49	-1.69E-46
MS.gene051980	MS.gene33262	0.803888	2.81E-49	-1.69E-46
MS.gene051980	MS.gene43149	0.816817	4.55E-52	-1.69E-46
MS.gene051980	MS.gene43997	0.81525	1.02E-51	-1.69E-46
MS.gene051980	MS.gene44521	0.811853	5.69E-51	-1.69E-46
MS.gene051980	MS.gene44667	0.800606	1.33E-48	-1.69E-46
MS.gene051980	MS.gene44673	0.816155	6.40E-52	-1.69E-46
MS.gene051980	MS.gene44674	0.830388	3.02E-55	-1.69E-46
MS.gene051980	MS.gene44677	0.811236	7.74E-51	-1.69E-46
MS.gene051980	MS.gene48558	0.801907	7.21E-49	-1.69E-46
MS.gene051980	MS.gene49992	0.808901	2.47E-50	-1.69E-46
MS.gene051980	MS.gene52873	0.805054	1.61E-49	-1.69E-46
MS.gene051980	MS.gene59701	0.818667	1.74E-52	-1.69E-46
MS.gene051980	MS.gene70827	0.813322	2.71E-51	-1.69E-46
MS.gene051980	MS.gene72185	0.805199	1.50E-49	-1.69E-46
MS.gene051980	MS.gene72187	0.807969	3.90E-50	-1.69E-46
MS.gene051980	MS.gene80929	0.808375	3.19E-50	-1.69E-46
MS.gene051980	MS.gene81581	0.819621	1.05E-52	-1.69E-46
MS.gene051980	MS.gene83118	0.800221	1.60E-48	-1.69E-46
MS.gene051980	MS.gene86331	0.807463	4.99E-50	-1.69E-46
MS.gene051980	MS.gene98800	0.804716	1.89E-49	-1.69E-46
MS.gene051980	MS.gene98801	0.801953	7.06E-49	-1.69E-46
MS.gene051980	MS.gene98808	0.818068	2.38E-52	-1.69E-46
MS.gene051980	MS.gene98809	0.821355	4.22E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051980.t1	MTR_2g099470	85.115	262	37	1	1	262	23	282	1.22e-170	472
MS.gene051980.t1	MTR_2g099465	90.789	228	20	1	36	262	27	254	2.75e-156	435
MS.gene051980.t1	MTR_3g118390	36.513	304	137	9	1	262	71	360	3.38e-57	187
MS.gene051980.t1	MTR_8g074350	36.184	304	148	8	1	262	14	313	2.37e-56	183
MS.gene051980.t1	MTR_8g074330	38.047	297	139	7	8	262	20	313	9.60e-56	182
MS.gene051980.t1	MTR_7g110780	37.238	239	114	5	59	262	34	271	1.20e-49	165
MS.gene051980.t1	MTR_8g074335	37.370	289	141	9	8	262	20	302	2.83e-46	157
MS.gene051980.t1	MTR_2g099450	64.167	120	14	2	142	261	84	174	2.37e-41	140
MS.gene051980.t1	MTR_2g099450	76.271	59	12	1	1	59	23	79	1.63e-23	94.0
MS.gene051980.t1	MTR_2g034680	29.876	241	124	9	66	262	62	301	1.15e-22	95.1
MS.gene051980.t1	MTR_1g105535	26.104	249	139	8	58	262	60	307	8.19e-19	84.7
MS.gene051980.t1	MTR_7g021640	26.104	249	139	8	58	262	57	304	4.34e-18	82.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051980.t1	AT3G54420	72.481	258	64	1	5	262	23	273	1.13e-138	391
MS.gene051980.t1	AT2G43590	55.385	260	104	3	3	262	17	264	7.53e-103	300
MS.gene051980.t1	AT2G43580	54.651	258	106	4	5	262	19	265	6.18e-99	290
MS.gene051980.t1	AT2G43610	48.339	271	123	7	1	262	19	281	5.96e-84	253
MS.gene051980.t1	AT2G43570	50.936	267	115	6	1	262	22	277	2.90e-83	251
MS.gene051980.t1	AT2G43620	45.985	274	127	8	1	262	19	283	2.81e-80	243
MS.gene051980.t1	AT3G47540	45.815	227	96	6	38	262	13	214	2.38e-59	187
MS.gene051980.t1	AT1G56680	41.026	273	139	12	1	262	19	280	1.17e-57	185
MS.gene051980.t1	AT1G56680	41.026	273	139	12	1	262	42	303	2.87e-57	185
MS.gene051980.t1	AT3G47540	45.291	223	95	6	38	258	13	210	1.62e-55	180
MS.gene051980.t1	AT3G12500	37.324	284	134	8	15	262	45	320	1.99e-52	174
MS.gene051980.t1	AT2G43600	36.727	275	147	11	1	262	13	273	4.53e-52	171
MS.gene051980.t1	AT2G43600	36.727	275	147	11	1	262	34	294	1.15e-51	171
MS.gene051980.t1	AT1G02360	37.657	239	113	5	59	262	28	265	3.24e-49	163
MS.gene051980.t1	AT1G02360	37.657	239	113	5	59	262	80	317	1.19e-48	164
MS.gene051980.t1	AT1G02360	37.657	239	113	5	59	262	74	311	1.29e-48	163
MS.gene051980.t1	AT4G01700	37.975	237	111	5	61	262	38	273	9.96e-47	157
MS.gene051980.t1	AT1G05850	27.039	233	124	7	71	262	77	304	2.23e-20	89.0
MS.gene051980.t1	AT1G05850	27.039	233	124	7	71	262	77	304	2.23e-20	89.0
MS.gene051980.t1	AT3G16920	27.126	247	134	10	61	262	68	313	3.49e-18	83.2
MS.gene051980.t1	AT3G16920	27.126	247	134	10	61	262	92	337	6.01e-18	82.4

Find 67 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGATCATTGGCCACAGTTTC+AGG	0.179142	2.2:-3507184	None:intergenic
CAGGAGTACTAGGGGAAATT+TGG	0.265985	2.2:-3506301	None:intergenic
TTATCTTGGAACTTCAACTA+TGG	0.266030	2.2:+3507121	MS.gene051980:CDS
ACATTCAAGTCGACCATTAA+TGG	0.286036	2.2:-3507293	None:intergenic
CACTCAATATTGTAGTCAAT+TGG	0.295638	2.2:+3507360	MS.gene051980:CDS
CGGCCATAGTATCCTTTGTT+AGG	0.327532	2.2:-3507085	None:intergenic
CTCAATTCTTATAATCAGTT+TGG	0.343244	2.2:+3506449	MS.gene051980:CDS
TATAATCAGTTTGGTAGGTC+TGG	0.352546	2.2:+3506458	MS.gene051980:CDS
TCAAGACAGCATTATGGTAT+TGG	0.355700	2.2:+3507218	MS.gene051980:CDS
TTGCTAGGACCAGGAGTACT+AGG	0.376009	2.2:-3506311	None:intergenic
GTGGACCCATTCAATTATCT+TGG	0.391722	2.2:+3507107	MS.gene051980:CDS
ATACCATAATGCTGTCTTGA+AGG	0.394568	2.2:-3507215	None:intergenic
AGCAGCTGCAATCTCACGTT+TGG	0.398595	2.2:-3506495	None:intergenic
GCAACGATTAGAGCCATTAA+TGG	0.421305	2.2:+3507280	MS.gene051980:CDS
TGCTATATAGAAGAGATTGA+TGG	0.423190	2.2:+3507013	MS.gene051980:CDS
TGTCCTTCAAGACAGCATTA+TGG	0.430786	2.2:+3507212	MS.gene051980:CDS
AGTCAATTGGGTGTTGCTCC+TGG	0.467511	2.2:+3507373	MS.gene051980:CDS
AATGTCATGAACCAAGGCTT+TGG	0.470097	2.2:+3507256	MS.gene051980:CDS
AAACTGATTATAAGAATTGA+GGG	0.470862	2.2:-3506447	None:intergenic
ACTCAATATTGTAGTCAATT+GGG	0.471459	2.2:+3507361	MS.gene051980:CDS
GAAGGACACTAGAGGATCAT+TGG	0.475900	2.2:-3507197	None:intergenic
CAAATTTCCCCTAGTACTCC+TGG	0.478722	2.2:+3506302	MS.gene051980:CDS
CAAACTGATTATAAGAATTG+AGG	0.480529	2.2:-3506448	None:intergenic
GAAGTTCCAAGATAATTGAA+TGG	0.481824	2.2:-3507113	None:intergenic
AACTTCAACTATGGACCAGC+TGG	0.489552	2.2:+3507130	MS.gene051980:CDS
CAAGCTGATTCTAGTTGTGC+AGG	0.493089	2.2:+3506389	MS.gene051980:CDS
GCTCCTAACAAAGGATACTA+TGG	0.497355	2.2:+3507082	MS.gene051980:CDS
CCGCATAACAAGGACCTTGT+TGG	0.499874	2.2:-3506277	None:intergenic
TAATCGTTGCACCAAAGCCT+TGG	0.508562	2.2:-3507267	None:intergenic
ATTCTTATAATCAGTTTGGT+AGG	0.512286	2.2:+3506453	MS.gene051980:CDS
AAGTTCCAAGATAATTGAAT+GGG	0.518029	2.2:-3507112	None:intergenic
GGTTTATGTTGCAGCGAACA+TGG	0.524712	2.2:+3506215	MS.gene051980:CDS
CAACAAGGTCCTTGTTATGC+GGG	0.525104	2.2:+3506278	MS.gene051980:CDS
GTTTGGTAGGTCTGGTTCTG+TGG	0.537901	2.2:+3506466	MS.gene051980:CDS
AGAGATTGATGGTGCATCAA+AGG	0.541283	2.2:+3507024	MS.gene051980:CDS
GAAATTTGGCCCGCATAACA+AGG	0.541623	2.2:-3506287	None:intergenic
AAACCATTGTCCTTTCCAGC+TGG	0.541792	2.2:-3507145	None:intergenic
TGCTAGGACCAGGAGTACTA+GGG	0.545368	2.2:-3506310	None:intergenic
AACAAAGGATACTATGGCCG+TGG	0.546171	2.2:+3507088	MS.gene051980:CDS
CAACTATGGACCAGCTGGAA+AGG	0.554552	2.2:+3507135	MS.gene051980:CDS
AATGCGAGTGCTCAAAATTG+TGG	0.565535	2.2:+3506182	MS.gene051980:CDS
CAAAATTGTGGGTGTGAGGA+AGG	0.568606	2.2:+3506194	MS.gene051980:CDS
CCAACAAGGTCCTTGTTATG+CGG	0.570087	2.2:+3506277	MS.gene051980:CDS
ACACGAGTCTGAACTGTGGT+TGG	0.575224	2.2:-3507328	None:intergenic
ACTGCTGCATATTGTGGCAC+AGG	0.575567	2.2:+3506251	MS.gene051980:CDS
TGTGGCACAGGGTGCCAACA+AGG	0.576717	2.2:+3506263	MS.gene051980:CDS
ATGCGAGTGCTCAAAATTGT+GGG	0.578430	2.2:+3506183	MS.gene051980:CDS
ACCACAGTTCAGACTCGTGT+TGG	0.593974	2.2:+3507331	MS.gene051980:CDS
GGTAACACTGCTGCATATTG+TGG	0.606429	2.2:+3506245	MS.gene051980:CDS
TTGACATCATTGCTAGGACC+AGG	0.607494	2.2:-3506320	None:intergenic
AAGATAATTGAATGGGTCCA+CGG	0.609609	2.2:-3507105	None:intergenic
ATTGAACTCTCCTGAAACTG+TGG	0.610000	2.2:+3507174	MS.gene051980:CDS
TATCCTTTGTTAGGAGCACA+CGG	0.615783	2.2:-3507076	None:intergenic
TAGCAAGTAAGCTTATCACC+AGG	0.624987	2.2:-3507391	None:intergenic
GCCACGTTGACATCATTGCT+AGG	0.637618	2.2:-3506326	None:intergenic
TGCTCAAAATTGTGGGTGTG+AGG	0.640043	2.2:+3506190	MS.gene051980:CDS
TACCCGTGTGCTCCTAACAA+AGG	0.646340	2.2:+3507073	MS.gene051980:CDS
TGCAGCGAACATGGATATTG+TGG	0.649796	2.2:+3506224	MS.gene051980:CDS
GGACCAGCTGGAAAGGACAA+TGG	0.650317	2.2:+3507142	MS.gene051980:CDS
GCTGTCTTGAAGGACACTAG+AGG	0.672889	2.2:-3507205	None:intergenic
CTGCTGCATATTGTGGCACA+GGG	0.674145	2.2:+3506252	MS.gene051980:CDS
GTGCACAATGTCATGAACCA+AGG	0.676197	2.2:+3507250	MS.gene051980:CDS
AATGGTCGACTTGAATGTGA+TGG	0.677633	2.2:+3507298	MS.gene051980:CDS
GCTAGGACCAGGAGTACTAG+GGG	0.693722	2.2:-3506309	None:intergenic
ATCCTTTGTTAGGAGCACAC+GGG	0.711989	2.2:-3507075	None:intergenic
TCCTAGCAATGATGTCAACG+TGG	0.754474	2.2:+3506325	MS.gene051980:CDS
ACCAACACGAGTCTGAACTG+TGG	0.761414	2.2:-3507332	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAACTGATTATAAGAATTGA+GGG	-	chr2.2:3506450-3506469	None:intergenic	20.0%
!	AACAAGAATTGAACTAAATG+AGG	-	chr2.2:3506838-3506857	None:intergenic	25.0%
!	AAGTTCCAAGATAATTGAAT+GGG	-	chr2.2:3507115-3507134	None:intergenic	25.0%
!	AATCTCAATCAATGACTTAA+AGG	+	chr2.2:3506742-3506761	MS.gene051980:intron	25.0%
!	ACTCAATATTGTAGTCAATT+GGG	+	chr2.2:3507361-3507380	MS.gene051980:CDS	25.0%
!	ATAAGCTATATGATTTGACT+AGG	+	chr2.2:3506865-3506884	MS.gene051980:intron	25.0%
!	ATCTCAATCAATGACTTAAA+GGG	+	chr2.2:3506743-3506762	MS.gene051980:intron	25.0%
!	ATTCTTATAATCAGTTTGGT+AGG	+	chr2.2:3506453-3506472	MS.gene051980:CDS	25.0%
!	CAAACTGATTATAAGAATTG+AGG	-	chr2.2:3506451-3506470	None:intergenic	25.0%
!	CTCAATTCTTATAATCAGTT+TGG	+	chr2.2:3506449-3506468	MS.gene051980:CDS	25.0%
!	GTTATGTATGTTGAGAAAAA+TGG	-	chr2.2:3506965-3506984	None:intergenic	25.0%
	CACTCAATATTGTAGTCAAT+TGG	+	chr2.2:3507360-3507379	MS.gene051980:CDS	30.0%
	GAAGTTCCAAGATAATTGAA+TGG	-	chr2.2:3507116-3507135	None:intergenic	30.0%
	TGCTATATAGAAGAGATTGA+TGG	+	chr2.2:3507013-3507032	MS.gene051980:CDS	30.0%
	TTATCTTGGAACTTCAACTA+TGG	+	chr2.2:3507121-3507140	MS.gene051980:CDS	30.0%
!	GTCATTGATTGAGATTGTAA+AGG	-	chr2.2:3506738-3506757	None:intergenic	30.0%
	AAGATAATTGAATGGGTCCA+CGG	-	chr2.2:3507108-3507127	None:intergenic	35.0%
	ACATTCAAGTCGACCATTAA+TGG	-	chr2.2:3507296-3507315	None:intergenic	35.0%
	ACTTTGATTAGCATTCAGCT+TGG	+	chr2.2:3506786-3506805	MS.gene051980:intron	35.0%
	ATACCATAATGCTGTCTTGA+AGG	-	chr2.2:3507218-3507237	None:intergenic	35.0%
	TATAATCAGTTTGGTAGGTC+TGG	+	chr2.2:3506458-3506477	MS.gene051980:CDS	35.0%
	TCAAGACAGCATTATGGTAT+TGG	+	chr2.2:3507218-3507237	MS.gene051980:CDS	35.0%
	AATGCGAGTGCTCAAAATTG+TGG	+	chr2.2:3506182-3506201	MS.gene051980:CDS	40.0%
	AATGTCATGAACCAAGGCTT+TGG	+	chr2.2:3507256-3507275	MS.gene051980:CDS	40.0%
	ATGCGAGTGCTCAAAATTGT+GGG	+	chr2.2:3506183-3506202	MS.gene051980:CDS	40.0%
	ATTGAACTCTCCTGAAACTG+TGG	+	chr2.2:3507174-3507193	MS.gene051980:CDS	40.0%
	GCAACGATTAGAGCCATTAA+TGG	+	chr2.2:3507280-3507299	MS.gene051980:CDS	40.0%
	GCTCCTAACAAAGGATACTA+TGG	+	chr2.2:3507082-3507101	MS.gene051980:CDS	40.0%
	GTGGACCCATTCAATTATCT+TGG	+	chr2.2:3507107-3507126	MS.gene051980:CDS	40.0%
	TAGCAAGTAAGCTTATCACC+AGG	-	chr2.2:3507394-3507413	None:intergenic	40.0%
	TGTCCTTCAAGACAGCATTA+TGG	+	chr2.2:3507212-3507231	MS.gene051980:CDS	40.0%
!	TATCCTTTGTTAGGAGCACA+CGG	-	chr2.2:3507079-3507098	None:intergenic	40.0%
!!	AATGGTCGACTTGAATGTGA+TGG	+	chr2.2:3507298-3507317	MS.gene051980:CDS	40.0%
!!	AGAGATTGATGGTGCATCAA+AGG	+	chr2.2:3507024-3507043	MS.gene051980:CDS	40.0%
!!!	GGAAAGGACAATGGTTTTGA+TGG	+	chr2.2:3507151-3507170	MS.gene051980:CDS	40.0%
	AAACCATTGTCCTTTCCAGC+TGG	-	chr2.2:3507148-3507167	None:intergenic	45.0%
	AACAAAGGATACTATGGCCG+TGG	+	chr2.2:3507088-3507107	MS.gene051980:CDS	45.0%
	AACTTCAACTATGGACCAGC+TGG	+	chr2.2:3507130-3507149	MS.gene051980:CDS	45.0%
	CAAAATTGTGGGTGTGAGGA+AGG	+	chr2.2:3506194-3506213	MS.gene051980:CDS	45.0%
	CAAATTTCCCCTAGTACTCC+TGG	+	chr2.2:3506302-3506321	MS.gene051980:CDS	45.0%
	CGGCCATAGTATCCTTTGTT+AGG	-	chr2.2:3507088-3507107	None:intergenic	45.0%
	GAAATTTGGCCCGCATAACA+AGG	-	chr2.2:3506290-3506309	None:intergenic	45.0%
	GAAGGACACTAGAGGATCAT+TGG	-	chr2.2:3507200-3507219	None:intergenic	45.0%
	GGTAACACTGCTGCATATTG+TGG	+	chr2.2:3506245-3506264	MS.gene051980:CDS	45.0%
	GGTTTATGTTGCAGCGAACA+TGG	+	chr2.2:3506215-3506234	MS.gene051980:CDS	45.0%
	GTGCACAATGTCATGAACCA+AGG	+	chr2.2:3507250-3507269	MS.gene051980:CDS	45.0%
	TAATCGTTGCACCAAAGCCT+TGG	-	chr2.2:3507270-3507289	None:intergenic	45.0%
	TCCTAGCAATGATGTCAACG+TGG	+	chr2.2:3506325-3506344	MS.gene051980:CDS	45.0%
	TGCAGCGAACATGGATATTG+TGG	+	chr2.2:3506224-3506243	MS.gene051980:CDS	45.0%
	TGCTCAAAATTGTGGGTGTG+AGG	+	chr2.2:3506190-3506209	MS.gene051980:CDS	45.0%
	TTGACATCATTGCTAGGACC+AGG	-	chr2.2:3506323-3506342	None:intergenic	45.0%
!	ATCCTTTGTTAGGAGCACAC+GGG	-	chr2.2:3507078-3507097	None:intergenic	45.0%
!	CAACAAGGTCCTTGTTATGC+GGG	+	chr2.2:3506278-3506297	MS.gene051980:CDS	45.0%
!	CAAGCTGATTCTAGTTGTGC+AGG	+	chr2.2:3506389-3506408	MS.gene051980:CDS	45.0%
!	CCAACAAGGTCCTTGTTATG+CGG	+	chr2.2:3506277-3506296	MS.gene051980:CDS	45.0%
!!	CAGGAGTACTAGGGGAAATT+TGG	-	chr2.2:3506304-3506323	None:intergenic	45.0%
	ACACGAGTCTGAACTGTGGT+TGG	-	chr2.2:3507331-3507350	None:intergenic	50.0%
	ACCAACACGAGTCTGAACTG+TGG	-	chr2.2:3507335-3507354	None:intergenic	50.0%
	ACCACAGTTCAGACTCGTGT+TGG	+	chr2.2:3507331-3507350	MS.gene051980:CDS	50.0%
	ACTGCTGCATATTGTGGCAC+AGG	+	chr2.2:3506251-3506270	MS.gene051980:CDS	50.0%
	AGCAGCTGCAATCTCACGTT+TGG	-	chr2.2:3506498-3506517	None:intergenic	50.0%
	CAACTATGGACCAGCTGGAA+AGG	+	chr2.2:3507135-3507154	MS.gene051980:CDS	50.0%
	CCGCATAACAAGGACCTTGT+TGG	-	chr2.2:3506280-3506299	None:intergenic	50.0%
	CTGCTGCATATTGTGGCACA+GGG	+	chr2.2:3506252-3506271	MS.gene051980:CDS	50.0%
	GCCACGTTGACATCATTGCT+AGG	-	chr2.2:3506329-3506348	None:intergenic	50.0%
	GCTGTCTTGAAGGACACTAG+AGG	-	chr2.2:3507208-3507227	None:intergenic	50.0%
	GGATCATTGGCCACAGTTTC+AGG	-	chr2.2:3507187-3507206	None:intergenic	50.0%
	TACCCGTGTGCTCCTAACAA+AGG	+	chr2.2:3507073-3507092	MS.gene051980:CDS	50.0%
!!	AGTCAATTGGGTGTTGCTCC+TGG	+	chr2.2:3507373-3507392	MS.gene051980:CDS	50.0%
!!	GTTTGGTAGGTCTGGTTCTG+TGG	+	chr2.2:3506466-3506485	MS.gene051980:CDS	50.0%
!!	TGCTAGGACCAGGAGTACTA+GGG	-	chr2.2:3506313-3506332	None:intergenic	50.0%
!!	TTGCTAGGACCAGGAGTACT+AGG	-	chr2.2:3506314-3506333	None:intergenic	50.0%
	GGACCAGCTGGAAAGGACAA+TGG	+	chr2.2:3507142-3507161	MS.gene051980:CDS	55.0%
!!	GCTAGGACCAGGAGTACTAG+GGG	-	chr2.2:3506312-3506331	None:intergenic	55.0%
!	TGTGGCACAGGGTGCCAACA+AGG	+	chr2.2:3506263-3506282	MS.gene051980:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.2	gene	3506164	3507414	3506164	ID=MS.gene051980
chr2.2	mRNA	3506164	3507414	3506164	ID=MS.gene051980.t1;Parent=MS.gene051980
chr2.2	exon	3506164	3506545	3506164	ID=MS.gene051980.t1.exon1;Parent=MS.gene051980.t1
chr2.2	CDS	3506164	3506545	3506164	ID=cds.MS.gene051980.t1;Parent=MS.gene051980.t1
chr2.2	exon	3507008	3507414	3507008	ID=MS.gene051980.t1.exon2;Parent=MS.gene051980.t1
chr2.2	CDS	3507008	3507414	3507008	ID=cds.MS.gene051980.t1;Parent=MS.gene051980.t1

Gene Sequence

>MS.gene051980

ATGATCATGGTTTCAAAAAATGCGAGTGCTCAAAATTGTGGGTGTGAGGAAGGTTTATGTTGCAGCGAACATGGATATTGTGGTAACACTGCTGCATATTGTGGCACAGGGTGCCAACAAGGTCCTTGTTATGCGGGCCAAATTTCCCCTAGTACTCCTGGTCCTAGCAATGATGTCAACGTGGCTGACATTGTTACACAAGAATTCTTCAATAGTATAATTGATCAAGCTGATTCTAGTTGTGCAGGAAAGAACTTCTACTCAAGAGCTGCTTTTCTTGATGCCCTCAATTCTTATAATCAGTTTGGTAGGTCTGGTTCTGTGGATGACTCCAAACGTGAGATTGCAGCTGCTTTTGCACATTTCACACATGAAACTCTACGTAAGTATTATATCATTCAAAGAATCAATCACAAGTTTAGTTTTCATGCAATTTGATCACTAAAACAACAAAATTTTAGAATGATTTCAGTGATTAAATTGATTGAACTAAGAACTAATATGATCAATGATTATTACTTTCAATAATCATTTGAGAATTTAGTTAATCACAAAGATAAAACTGTCAAAACCTTTACAATCTCAATCAATGACTTAAAGGGCGAATCAATATGATTAATGAACTTTGATTAGCATTCAGCTTGGTTAACAGTTGTTTGAGACTAACGAGACCTCATTTAGTTCAATTCTTGTTCTAGCGTATAAGCTATATGATTTGACTAGGTTTAATTTTGTACACACATACTCACATCTATAATAAGCTAATAAGTAATAAGTAAATTTCATGTTTCTTAATCTCCATTTTTCTCAACATACATAACATGTGAAATTAATGTTGATGCAGATTTTTGCTATATAGAAGAGATTGATGGTGCATCAAAGGACTACTGCGATGAAAGCAACACAAAGTACCCGTGTGCTCCTAACAAAGGATACTATGGCCGTGGACCCATTCAATTATCTTGGAACTTCAACTATGGACCAGCTGGAAAGGACAATGGTTTTGATGGATTGAACTCTCCTGAAACTGTGGCCAATGATCCTCTAGTGTCCTTCAAGACAGCATTATGGTATTGGATGAAATATGTGCACAATGTCATGAACCAAGGCTTTGGTGCAACGATTAGAGCCATTAATGGTCGACTTGAATGTGATGGTGCTAAGCCAACCACAGTTCAGACTCGTGTTGGTTACTACACTCAATATTGTAGTCAATTGGGTGTTGCTCCTGGTGATAAGCTTACTTGCTAA

Protein sequence

>MS.gene051980.t1

MIMVSKNASAQNCGCEEGLCCSEHGYCGNTAAYCGTGCQQGPCYAGQISPSTPGPSNDVNVADIVTQEFFNSIIDQADSSCAGKNFYSRAAFLDALNSYNQFGRSGSVDDSKREIAAAFAHFTHETLHFCYIEEIDGASKDYCDESNTKYPCAPNKGYYGRGPIQLSWNFNYGPAGKDNGFDGLNSPETVANDPLVSFKTALWYWMKYVHNVMNQGFGATIRAINGRLECDGAKPTTVQTRVGYYTQYCSQLGVAPGDKLTC