AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24607


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24607.t1 MTR_2g009110 98.333 1260 16 2 1 1260 1 1255 0.0 2547
MS.gene24607.t1 MTR_2g009110 93.195 1352 52 6 1 1325 1 1339 0.0 2547
MS.gene24607.t1 MTR_1g064320 88.889 63 7 0 1293 1355 405 467 2.42e-26 114
MS.gene24607.t1 MTR_1g064320 88.889 63 7 0 1293 1355 406 468 2.45e-26 114
MS.gene24607.t1 MTR_2g009090 49.367 79 36 1 73 151 16 90 1.71e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24607.t1 AT5G64270 83.937 1270 177 12 4 1260 5 1260 0.0 2070
MS.gene24607.t1 AT3G57050 77.778 63 14 0 1293 1355 324 386 3.16e-23 103
MS.gene24607.t1 AT3G57050 77.778 63 14 0 1293 1355 346 408 4.14e-23 104
MS.gene24607.t1 AT3G57050 77.778 63 14 0 1293 1355 387 449 6.21e-23 104
MS.gene24607.t1 AT3G57050 77.778 63 14 0 1293 1355 402 464 6.73e-23 104

Find 387 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGATTATCAGTATTT+TGG 0.097766 1.2:-49158360 MS.gene24607:CDS
TCATGCCTATTCTTCAAAAT+TGG 0.171597 1.2:+49156698 None:intergenic
AGAAGTTCTAGGTTCAATTT+TGG 0.175711 1.2:-49156801 MS.gene24607:CDS
ATGCAATGACACCGGGAATA+TGG 0.198192 1.2:-49159010 MS.gene24607:CDS
TGATAGAGTTCTTTATAAAT+TGG 0.206729 1.2:-49158097 MS.gene24607:CDS
GGCACTGGGAGTGGCTGGTT+TGG 0.210974 1.2:-49156177 MS.gene24607:CDS
TCTTTCCTCTTTGAGTATAT+TGG 0.214805 1.2:-49156308 MS.gene24607:CDS
AAGTCGATTGTCAATGTTAT+TGG 0.215549 1.2:-49156770 MS.gene24607:CDS
GGATGAAACACCTGCTACTA+TGG 0.221807 1.2:-49158772 MS.gene24607:CDS
AGTATAATAGCTGGCATATA+AGG 0.269378 1.2:+49157489 None:intergenic
GCACTGGGAGTGGCTGGTTT+GGG 0.272651 1.2:-49156176 MS.gene24607:CDS
TAAAGCAAGGTAGGCTGATT+AGG 0.274729 1.2:+49154365 None:intergenic
TAAAGCAAGGTAGGCTGATT+AGG 0.274729 1.2:+49154634 None:intergenic
ACTGATAAGGCTCGTGAATT+TGG 0.282330 1.2:-49158207 MS.gene24607:CDS
AGAGCTACTGTGAACACTTT+TGG 0.283839 1.2:-49156539 MS.gene24607:CDS
CGCTCTCATGGACAGGGATT+TGG 0.283876 1.2:-49156237 MS.gene24607:CDS
TGCTTTATTGCCCTTCTTGA+AGG 0.285663 1.2:-49157839 MS.gene24607:CDS
ACAAGAAGGGTATAAGGTTT+TGG 0.290686 1.2:-49158541 MS.gene24607:CDS
TCTTTATAAATTGGATGAAT+TGG 0.295496 1.2:-49158088 MS.gene24607:CDS
AAAGATGACTCCACCTATTA+AGG 0.296881 1.2:-49156741 MS.gene24607:CDS
GTTTCCACAAGAAGGGTATA+AGG 0.306484 1.2:-49158547 MS.gene24607:CDS
GATGCTAATGTGATGCTTAA+TGG 0.306849 1.2:-49157046 MS.gene24607:CDS
GCTGAAGCTGCTGCTCCTTA+TGG 0.308195 1.2:-49157628 MS.gene24607:CDS
AAAATTGAACCTAGAACTTC+TGG 0.312356 1.2:+49156803 None:intergenic
CTTTGAGTATATTGGTGAAA+TGG 0.316138 1.2:-49156300 MS.gene24607:CDS
AATTTCGAAGAAGAAGAAAA+AGG 0.321577 1.2:-49159192 MS.gene24607:CDS
AAACCACCAGGAGCTTCTTT+AGG 0.324095 1.2:+49158396 None:intergenic
GCAAGAAGAACGCAAGAAAA+TGG 0.324405 1.2:-49159627 MS.gene24607:CDS
CTCCTGGGAGGAGGAATAGA+TGG 0.327493 1.2:-49158950 MS.gene24607:CDS
TCCTGTTGGTGGTGTTGAAT+TGG 0.331040 1.2:-49158691 MS.gene24607:CDS
AGCAGAAGAGGAGGAATAGA+TGG 0.331460 1.2:-49159106 MS.gene24607:CDS
GGACCAAGAGAGGCATCTTT+TGG 0.333443 1.2:-49158130 MS.gene24607:CDS
AAGATGAGAGTGAACCTTAC+AGG 0.336123 1.2:-49157192 MS.gene24607:CDS
CATCTTGATCTTTGTCTCTT+CGG 0.340768 1.2:+49158795 None:intergenic
CTTGCTACACCTACGCCGTT+GGG 0.343482 1.2:-49158471 MS.gene24607:CDS
CAGCTTCTTATGTGCCGATT+AGG 0.343784 1.2:-49158512 MS.gene24607:CDS
TTACACCTGGTGGTGCTACT+TGG 0.344851 1.2:-49158857 MS.gene24607:CDS
ATATATAACTCTCTGTATAT+TGG 0.346022 1.2:-49155960 MS.gene24607:CDS
GGGAGAGAGAGGAAACAATT+AGG 0.348222 1.2:-49159217 MS.gene24607:CDS
CCAAAATACTGATAATCTTC+AGG 0.353123 1.2:+49158360 None:intergenic
AGCCATTGTGGAAGGGTATT+AGG 0.358221 1.2:-49157579 MS.gene24607:CDS
CTGGGAAGCAAATCCTTAAT+AGG 0.363997 1.2:+49156728 None:intergenic
TCCACCCTGCCCGGAAAGTT+AGG 0.365154 1.2:-49155998 MS.gene24607:CDS
AGTACACCTCCCTAACTTTC+CGG 0.366416 1.2:+49155988 None:intergenic
GGAGGAAGGTGGTGTGAAAA+AGG 0.368505 1.2:-49159066 MS.gene24607:CDS
CTGGGTTAGGAGGATGGCTT+TGG 0.377749 1.2:-49157311 MS.gene24607:CDS
GAAGAGTACCCAGAAGTTCT+AGG 0.380939 1.2:-49156812 MS.gene24607:CDS
TGGGTTTATTATTCCGTTGA+TGG 0.385433 1.2:-49157515 MS.gene24607:CDS
CCACAAATCTGAGGAAGATA+TGG 0.387473 1.2:+49156983 None:intergenic
TTTGAGTATATTGGTGAAAT+GGG 0.389391 1.2:-49156299 MS.gene24607:CDS
TGCTGACCACGATTCTCTTC+AGG 0.390854 1.2:+49158429 None:intergenic
AAACGCCGGATCCGTCTGTT+AGG 0.391365 1.2:-49159277 MS.gene24607:CDS
GGAGAAGTTTCAAATATGTT+TGG 0.392943 1.2:+49156113 None:intergenic
TTCCTCTCTTTCTGCTCATC+CGG 0.400046 1.2:+49158300 None:intergenic
GTAGCAAGAAGCTTCCTTGC+AGG 0.400126 1.2:+49158486 None:intergenic
CTAGACAATGCACTTAGAAC+TGG 0.400887 1.2:-49154235 MS.gene24607:CDS
CCAGAACTTAATGTGCAAAA+TGG 0.400933 1.2:-49156347 MS.gene24607:CDS
AGCAGCAGCTTCAGCAAGTG+CGG 0.405247 1.2:+49157636 None:intergenic
GTACACCTCCCTAACTTTCC+GGG 0.406012 1.2:+49155989 None:intergenic
AGTAGTCTTCATCAATCAAA+AGG 0.407120 1.2:+49158025 None:intergenic
GACTACTATGCCCGTGTTGA+AGG 0.409440 1.2:-49158009 MS.gene24607:CDS
TGAGCTTCTTGAGATGCTTA+AGG 0.409469 1.2:-49156582 MS.gene24607:CDS
CTCTCTGTATATTGGAGCTC+AGG 0.412940 1.2:-49155952 MS.gene24607:CDS
GTTGCTTATGCAGCCTACTT+TGG 0.415175 1.2:-49158154 MS.gene24607:CDS
TGCAATGACACCGGGAATAT+GGG 0.416084 1.2:-49159009 MS.gene24607:CDS
GCATAAGCAACGGCAGTATT+CGG 0.416589 1.2:+49158166 None:intergenic
TTCCTTGCAGGTGTCCTAAT+CGG 0.417079 1.2:+49158498 None:intergenic
TCCATGACCATTCGCCTGTA+AGG 0.417256 1.2:+49157178 None:intergenic
TGAGAAGGTGGTCACTAACT+TGG 0.419649 1.2:-49157149 MS.gene24607:CDS
CCATATCTTCCTCAGATTTG+TGG 0.421065 1.2:-49156983 MS.gene24607:CDS
TCCCAGTGCCATGTGCTTCA+CGG 0.421966 1.2:+49156190 None:intergenic
AGAGTTATTGATGCTACTCC+TGG 0.422519 1.2:-49158966 MS.gene24607:CDS
TGCCGTGAAGCACATGGCAC+TGG 0.425652 1.2:-49156192 MS.gene24607:CDS
ATGCTAATGTGATGCTTAAT+GGG 0.428045 1.2:-49157045 MS.gene24607:CDS
TGGGTAGGATTGCTGATCGT+GGG 0.432130 1.2:-49156646 MS.gene24607:CDS
TGGACAGGGATTTGGTTCAT+AGG 0.432432 1.2:-49156229 MS.gene24607:CDS
AAGTCATGCTTATTCTGATC+CGG 0.432896 1.2:-49157462 MS.gene24607:CDS
GGAAGAGGAAGAAGCTGGTA+AGG 0.433964 1.2:-49159171 MS.gene24607:CDS
ATAACATTGATGAATATGTT+AGG 0.437807 1.2:-49157912 MS.gene24607:CDS
CATCATCACTAGTCTGCTCT+TGG 0.441191 1.2:+49157065 None:intergenic
ACCTTCGACACAGATCTCTA+TGG 0.441624 1.2:-49159575 MS.gene24607:CDS
CTTCAAAATTGGAGTCAACC+TGG 0.446024 1.2:+49156709 None:intergenic
TCCATTTGCTGAACTATGTC+TGG 0.446236 1.2:-49156136 MS.gene24607:CDS
CTGGTCTCGCGGACTGCAGC+AGG 0.446374 1.2:+49154594 None:intergenic
AAAGCAAGGTAGGCTGATTA+GGG 0.447262 1.2:+49154366 None:intergenic
AAAGCAAGGTAGGCTGATTA+GGG 0.447262 1.2:+49154635 None:intergenic
GAGAGATGAAGCGTTGAAGA+GGG 0.447466 1.2:-49159237 MS.gene24607:CDS
TGAGAGATGAAGCGTTGAAG+AGG 0.451101 1.2:-49159238 MS.gene24607:CDS
TTGAGGACGCTCTCATGGAC+AGG 0.452082 1.2:-49156244 MS.gene24607:CDS
CTTGGCAAGCTCGGCACACC+GGG 0.452247 1.2:-49157795 MS.gene24607:CDS
GCAGGTGTAGCACCAGGTAA+TGG 0.453544 1.2:+49158738 None:intergenic
ATAAATTGGATGAATTGGTT+CGG 0.454142 1.2:-49158083 MS.gene24607:CDS
CACATGGCACTGGGAGTGGC+TGG 0.454748 1.2:-49156182 MS.gene24607:CDS
ACAAGAATCTTATGCACATA+AGG 0.457643 1.2:+49158060 None:intergenic
CGTCTTCTCGATTTCATCAT+CGG 0.458922 1.2:+49159649 None:intergenic
CTGGTCTTGCGGACTGCAGC+AGG 0.459922 1.2:+49154325 None:intergenic
GGCGCAGTTGTAAACTCGCT+CGG 0.461377 1.2:-49157019 MS.gene24607:CDS
TTTGAGGCAGTTAACTGATA+AGG 0.461605 1.2:-49158220 MS.gene24607:CDS
TGAAGGGATGAGGGTAGCCT+TGG 0.463322 1.2:-49156060 MS.gene24607:CDS
GCCAATTCAACACCACCAAC+AGG 0.464397 1.2:+49158690 None:intergenic
GTGCCATGAGGAACAATTGA+TGG 0.465345 1.2:-49156870 MS.gene24607:CDS
TTTGCTTGAGGACGCTCTCA+TGG 0.466132 1.2:-49156249 MS.gene24607:CDS
ATGGGATCAGAATCAGAATC+AGG 0.467762 1.2:-49159087 MS.gene24607:CDS
CCTACTCCTGGTGCTTTGCA+AGG 0.467895 1.2:-49158663 MS.gene24607:CDS
ACAGATCCTCATCCATTCTC+TGG 0.468210 1.2:+49156607 None:intergenic
GATCTTTGTCTCTTCGGAGT+CGG 0.470813 1.2:+49158801 None:intergenic
AGTGTCGTTGCATCTGCTCT+CGG 0.474620 1.2:-49157868 MS.gene24607:CDS
TCATCAGTAGCAGGAATTGA+AGG 0.474996 1.2:+49159527 None:intergenic
GGGCAGGGTGGAACAGTCCT+TGG 0.475048 1.2:+49156009 None:intergenic
GGTGTCATTGCATTAGAATC+AGG 0.475769 1.2:+49159020 None:intergenic
TCATCAATGTTATCTATGTC+AGG 0.476225 1.2:+49157922 None:intergenic
ACCTCCCTAACTTTCCGGGC+AGG 0.476349 1.2:+49155993 None:intergenic
TCTTGCTACACCTACGCCGT+TGG 0.476894 1.2:-49158472 MS.gene24607:CDS
GCCAGACATAGTTCAGCAAA+TGG 0.476897 1.2:+49156135 None:intergenic
AAAGGCTAAGACTTCTGATT+GGG 0.476928 1.2:-49159048 MS.gene24607:CDS
TCTAATCTCAGTAAAGCTGC+TGG 0.478206 1.2:-49157973 MS.gene24607:CDS
AAAAGGCTAAGACTTCTGAT+TGG 0.479035 1.2:-49159049 MS.gene24607:CDS
GTAGTCTTCATCAATCAAAA+GGG 0.482357 1.2:+49158026 None:intergenic
GTTGAATGAAGAGAATGAAG+AGG 0.482375 1.2:-49158331 MS.gene24607:CDS
TACACCTGGTGGTGCTACTT+GGG 0.482601 1.2:-49158856 MS.gene24607:CDS
ATCTGTTGGTATTGAGGATG+TGG 0.483898 1.2:-49154275 MS.gene24607:CDS
GCTTATGCAGCCTACTTTGG+AGG 0.483942 1.2:-49158151 MS.gene24607:CDS
GCGTCGTCAGAATTGTTAAT+CGG 0.485069 1.2:+49159419 None:intergenic
CTATTAAGGATTTGCTTCCC+AGG 0.486209 1.2:-49156727 MS.gene24607:CDS
TCTGTCAGAGTAAGAAATCT+TGG 0.487061 1.2:-49157813 MS.gene24607:CDS
ATAATTTGTTGAGGTGGGAG+AGG 0.487090 1.2:-49158620 MS.gene24607:CDS
GTTTCTTCTTCATCAGTAGC+AGG 0.488527 1.2:+49159518 None:intergenic
CAAGGTCAATACAGTTCTCC+TGG 0.488577 1.2:+49156669 None:intergenic
GTCGGTGTTGCTGATATTGT+TGG 0.492268 1.2:-49157235 MS.gene24607:CDS
AGCGTTGAAGAGGGAGAGAG+AGG 0.494960 1.2:-49159228 MS.gene24607:CDS
AAGATCTTCTGTTAAACCTC+TGG 0.495227 1.2:+49154306 None:intergenic
AAGATCTTCTGTTAAACCTC+TGG 0.495227 1.2:+49154575 None:intergenic
TTCAAGAAGGGCAATAAAGC+AGG 0.495269 1.2:+49157841 None:intergenic
CTCAACAAATTATACTGCTC+CGG 0.495418 1.2:+49158630 None:intergenic
TTGTGCTCATCCTCTAGTGA+TGG 0.495697 1.2:+49155909 None:intergenic
GAAGCACATGGCACTGGGAG+TGG 0.497504 1.2:-49156186 MS.gene24607:CDS
GGAAAGTTAGGGAGGTGTAC+TGG 0.497515 1.2:-49155986 MS.gene24607:CDS
TGAGAGCGTCCTCAAGCAAA+GGG 0.497716 1.2:+49156252 None:intergenic
GCAGCACCGTGGTAAGGTGC+TGG 0.499407 1.2:-49157557 MS.gene24607:CDS
GATTATTCAATAGAGTTGCC+AGG 0.499509 1.2:+49156483 None:intergenic
AAACTTCTGGGTTAGGAGGA+TGG 0.499766 1.2:-49157317 MS.gene24607:CDS
GATGCTACTCCTAAGCTTAG+TGG 0.500348 1.2:-49158834 MS.gene24607:CDS
GATCTTGTTCGTATATCTGT+TGG 0.501570 1.2:-49154289 MS.gene24607:CDS
GATCTTGTTCGTATATCTGT+TGG 0.501570 1.2:-49154558 MS.gene24607:intron
GGGATATTGAAGAGAGGAAT+CGG 0.502496 1.2:-49158599 MS.gene24607:CDS
GTTATCTATGTCAGGCCTCA+TGG 0.502813 1.2:+49157930 None:intergenic
GGCTACCCTCATCCCTTCAA+TGG 0.503009 1.2:+49156064 None:intergenic
CCACCCTGCCCGGAAAGTTA+GGG 0.503764 1.2:-49155997 MS.gene24607:CDS
GCAGTATAATTTGTTGAGGT+GGG 0.504182 1.2:-49158625 MS.gene24607:CDS
CTGTTAAACCTCTGGTCTTG+CGG 0.504752 1.2:+49154314 None:intergenic
TAACCAAAAGATGCCTCTCT+TGG 0.506202 1.2:+49158127 None:intergenic
AAGGACTGTTCCACCCTGCC+CGG 0.506812 1.2:-49156007 MS.gene24607:CDS
GGATATATTGCGAAAGCCAT+CGG 0.506917 1.2:-49156518 MS.gene24607:CDS
TCAAAACTTTCAATACCATA+AGG 0.507643 1.2:+49157613 None:intergenic
ATCTGATATTGATGCAAGGT+TGG 0.508434 1.2:-49157122 MS.gene24607:CDS
CCTGCTGCTGCTTATACACC+TGG 0.509073 1.2:-49158720 MS.gene24607:CDS
GTTGTCCTGTATGAGTATCT+TGG 0.510312 1.2:-49156836 MS.gene24607:CDS
CTTGTGGAAATTATAGAGCA+TGG 0.510872 1.2:-49157709 MS.gene24607:CDS
TCTTCAGGAATCTGATAAAG+TGG 0.510895 1.2:+49158444 None:intergenic
CCTCCCTAACTTTCCGGGCA+GGG 0.511382 1.2:+49155994 None:intergenic
ACCTTACAGGCGAATGGTCA+TGG 0.511454 1.2:-49157179 MS.gene24607:CDS
TGCTGTGACCCCTTTGCTTG+AGG 0.513505 1.2:-49156261 MS.gene24607:CDS
TGGGATGAGACACCGACGCC+GGG 0.513612 1.2:-49158930 MS.gene24607:CDS
TATTTCCCTCCCTTCAACAC+GGG 0.514922 1.2:+49157999 None:intergenic
TTTGGGTTGCGAGGATGCGC+TGG 0.515289 1.2:-49156159 MS.gene24607:CDS
ACACCTGGTGTTACTCCTGT+TGG 0.515327 1.2:-49158705 MS.gene24607:CDS
AATGTGATGCTTAATGGGTT+CGG 0.516022 1.2:-49157040 MS.gene24607:CDS
ATTGAATAATCTCAAGGTGC+AGG 0.516114 1.2:-49156471 MS.gene24607:CDS
GTAATCCCACCACTAAGCTT+AGG 0.516729 1.2:+49158825 None:intergenic
TCTGATTCAATCTCCGTCTC+CGG 0.517371 1.2:+49159342 None:intergenic
GTTCTTAATTACTGTCTCCA+AGG 0.517599 1.2:-49156026 MS.gene24607:CDS
GTCTCCGGTAATCATCTTCA+CGG 0.517637 1.2:+49159357 None:intergenic
AGCAGTATAATTTGTTGAGG+TGG 0.517845 1.2:-49158626 MS.gene24607:CDS
TCGTATATCTGTTGGTATTG+AGG 0.519628 1.2:-49154281 MS.gene24607:CDS
CCTGGTGTTACTCCTGTTGG+TGG 0.520763 1.2:-49158702 MS.gene24607:CDS
AGTTTGTACCTGCCAGAGAA+TGG 0.523117 1.2:-49156619 MS.gene24607:CDS
TTGACCGTGAAGATGATTAC+CGG 0.523129 1.2:-49159361 MS.gene24607:CDS
CGATACTCATTCATCAGTGC+TGG 0.524696 1.2:+49156374 None:intergenic
GGTGTAGCATCCCATATTCC+CGG 0.524740 1.2:+49158999 None:intergenic
CGAAGAGACAAAGATCAAGA+TGG 0.525075 1.2:-49158794 MS.gene24607:CDS
TGCGAAAGCCATCGGACCAC+AGG 0.525261 1.2:-49156510 MS.gene24607:CDS
GATGCTTAAGGCACACAAGA+AGG 0.525703 1.2:-49156570 MS.gene24607:CDS
CGCAGAGGAAAACTGCTTTG+AGG 0.525795 1.2:-49158236 MS.gene24607:CDS
TTCAAAATTGGAGTCAACCT+GGG 0.526301 1.2:+49156710 None:intergenic
GACTTCTTTAGTATAATAGC+TGG 0.526805 1.2:+49157480 None:intergenic
TAATTTGTTGAGGTGGGAGA+GGG 0.527574 1.2:-49158619 MS.gene24607:CDS
ATCCTCATCCATTCTCTGGC+AGG 0.527834 1.2:+49156611 None:intergenic
TGGGATGCTACACCGACTCC+TGG 0.529207 1.2:-49158990 MS.gene24607:CDS
TCCCATCTATTCCTCCTCCC+AGG 0.529228 1.2:+49158948 None:intergenic
TGGAAGCCATTGAAGGGATG+AGG 0.531614 1.2:-49156070 MS.gene24607:CDS
GCGCAGTTGTAAACTCGCTC+GGG 0.533320 1.2:-49157018 MS.gene24607:CDS
TCAGAAACTTCTGGGTTAGG+AGG 0.533859 1.2:-49157321 MS.gene24607:CDS
TGGTAAGGTTGCGCCGGAGA+AGG 0.533863 1.2:-49159156 MS.gene24607:CDS
TTTGCAAGGGTCGTTTACGC+CGG 0.534091 1.2:-49158649 MS.gene24607:CDS
AGCAGAATCAACAGCAGAAG+AGG 0.534224 1.2:-49159118 MS.gene24607:CDS
GCATATAAGGCTTCCATCAA+CGG 0.534950 1.2:+49157502 None:intergenic
GTGTGTGAGCACTGAGGGTG+TGG 0.535884 1.2:-49157383 MS.gene24607:CDS
GGTTGATTCTGATGCTACAC+CGG 0.536421 1.2:-49158901 MS.gene24607:CDS
CTGACAGACGGCCTTCAAGA+AGG 0.536511 1.2:+49157828 None:intergenic
TCTCAGTAAAGCTGCTGGGT+TGG 0.536657 1.2:-49157968 MS.gene24607:CDS
CTTCTCCAAGATACTCATAC+AGG 0.537984 1.2:+49156831 None:intergenic
CATCGGACCACAGGATGTCC+TGG 0.538913 1.2:-49156501 MS.gene24607:CDS
AAAACCTTATACCCTTCTTG+TGG 0.539245 1.2:+49158543 None:intergenic
GAAGGGATGAGGGTAGCCTT+GGG 0.540075 1.2:-49156059 MS.gene24607:CDS
CTCTCTTGGTCCTCCAAAGT+AGG 0.542045 1.2:+49158141 None:intergenic
GAATGAAGAGGAGTTGTCTC+CGG 0.542145 1.2:-49158319 MS.gene24607:CDS
ATCACAGCATTTATCACATG+TGG 0.542295 1.2:+49156092 None:intergenic
ATTAACAATTCTGACGACGC+TGG 0.542334 1.2:-49159416 MS.gene24607:CDS
CAGGACATCCTGTGGTCCGA+TGG 0.543451 1.2:+49156502 None:intergenic
CTCCGGATGAGCAGAAAGAG+AGG 0.543658 1.2:-49158302 MS.gene24607:CDS
TTGCTGCACAATCTTAATCC+CGG 0.544337 1.2:+49157777 None:intergenic
AGTGGCTGGTTTGGGTTGCG+AGG 0.545104 1.2:-49156168 MS.gene24607:CDS
ATTGAATCAGATTCTTTCGC+CGG 0.546582 1.2:-49159330 MS.gene24607:CDS
GCAAAAGCATCATGTCGATC+CGG 0.547159 1.2:+49159311 None:intergenic
CAACAGCAATTCTTGAAATG+AGG 0.547976 1.2:+49156903 None:intergenic
AACTCTATTGAATAATCTCA+AGG 0.549147 1.2:-49156477 MS.gene24607:CDS
GAACAATTGATGGGTCATCT+TGG 0.549166 1.2:-49156860 MS.gene24607:CDS
GTGGGTAGGATTGCTGATCG+TGG 0.549308 1.2:-49156647 MS.gene24607:CDS
TTTCCACAAGAGATCTCAGA+TGG 0.550608 1.2:+49157722 None:intergenic
CTAATCGGCACATAAGAAGC+TGG 0.552031 1.2:+49158513 None:intergenic
TAAGACCTAACAGACGGATC+CGG 0.553187 1.2:+49159272 None:intergenic
ATGCTATGTTTCCACAAGAA+GGG 0.554606 1.2:-49158554 MS.gene24607:CDS
AGTCATGCTTATTCTGATCC+GGG 0.557301 1.2:-49157461 MS.gene24607:CDS
GAGAAGGTGGTCACTAACTT+GGG 0.558654 1.2:-49157148 MS.gene24607:CDS
ACACCGGGTGGTGTAACGCC+TGG 0.559480 1.2:-49158885 MS.gene24607:CDS
CGTCAGGTGACTGAAACTCC+CGG 0.560982 1.2:+49157443 None:intergenic
ATAATGAATTTGTTACGTCT+CGG 0.561088 1.2:-49159391 MS.gene24607:CDS
AAATTGAACCTAGAACTTCT+GGG 0.561337 1.2:+49156804 None:intergenic
GATGCTATGTTTCCACAAGA+AGG 0.561803 1.2:-49158555 MS.gene24607:CDS
GGGAGAGGGATATTGAAGAG+AGG 0.562525 1.2:-49158605 MS.gene24607:CDS
CGTGCGACATAAAGCAAGGT+AGG 0.562982 1.2:+49154625 None:intergenic
GAATTGGCTACACCTACTCC+TGG 0.563974 1.2:-49158675 MS.gene24607:CDS
CCACCAGGCGTTACACCACC+CGG 0.565365 1.2:+49158882 None:intergenic
TGACAGACGGCCTTCAAGAA+GGG 0.565592 1.2:+49157829 None:intergenic
GTTATGACCGACGTTATGAC+CGG 0.566315 1.2:+49159451 None:intergenic
GTTACACTTCCCATAGTAGC+AGG 0.566318 1.2:+49158762 None:intergenic
ATGCTTAAGGCACACAAGAA+GGG 0.566666 1.2:-49156569 MS.gene24607:CDS
GGTGTTGAAGCCATTGTGGA+AGG 0.566693 1.2:-49157587 MS.gene24607:CDS
CCACCAGGTGTAACACCACC+AGG 0.567246 1.2:+49158867 None:intergenic
CTGTTAAACCTCTGGTCTCG+CGG 0.567480 1.2:+49154583 None:intergenic
TTGCTACACCTACGCCGTTG+GGG 0.568070 1.2:-49158470 MS.gene24607:CDS
GATGTTCCTAAAGAAGCTCC+TGG 0.568413 1.2:-49158402 MS.gene24607:CDS
ACGTTATGACCGGTGTATGA+CGG 0.569117 1.2:+49159461 None:intergenic
TATTAGGCAGCACCGTGGTA+AGG 0.569561 1.2:-49157563 MS.gene24607:CDS
TTTCACCAATATACTCAAAG+AGG 0.569856 1.2:+49156303 None:intergenic
ATGAGAGCGTCCTCAAGCAA+AGG 0.570645 1.2:+49156251 None:intergenic
GCCGTGAAGCACATGGCACT+GGG 0.570780 1.2:-49156191 MS.gene24607:CDS
CGTGTGACATAAAGCAAGGT+AGG 0.571228 1.2:+49154356 None:intergenic
GAATAGGCATGAGAAAGTCC+AGG 0.573723 1.2:-49156687 MS.gene24607:CDS
GACACCGACGCCGGGGAGGT+TGG 0.573817 1.2:-49158922 MS.gene24607:CDS
AGTGGAGTCCCCAACGGCGT+AGG 0.574440 1.2:+49158462 None:intergenic
TCTTGGCAAGCTCGGCACAC+CGG 0.574881 1.2:-49157796 MS.gene24607:CDS
TCCTGGGAGGAGGAATAGAT+GGG 0.575435 1.2:-49158949 MS.gene24607:CDS
GCCCCATCTGAGATCTCTTG+TGG 0.575595 1.2:-49157725 MS.gene24607:CDS
ATCACTAGTCTGCTCTTGGA+AGG 0.575981 1.2:+49157069 None:intergenic
CTAATCTCAGTAAAGCTGCT+GGG 0.576518 1.2:-49157972 MS.gene24607:CDS
GATGAAACACCTGCTACTAT+GGG 0.577456 1.2:-49158771 MS.gene24607:CDS
ACTACTATGCCCGTGTTGAA+GGG 0.579026 1.2:-49158008 MS.gene24607:CDS
CATCAGTAGCAGGAATTGAA+GGG 0.579422 1.2:+49159528 None:intergenic
GAAGAGACAAAGATCAAGAT+GGG 0.579429 1.2:-49158793 MS.gene24607:CDS
CTACTCCTGGTGCTTTGCAA+GGG 0.581506 1.2:-49158662 MS.gene24607:CDS
ACATGTGATAAATGCTGTGA+TGG 0.582632 1.2:-49156090 MS.gene24607:CDS
GGAGAACTGTATTGACCTTG+TGG 0.582863 1.2:-49156666 MS.gene24607:CDS
TGCTGCTGGTGAGAAAACGC+CGG 0.582900 1.2:-49159291 MS.gene24607:CDS
GTAAGAAATCTTGGCAAGCT+CGG 0.583586 1.2:-49157804 MS.gene24607:CDS
AGAAGCTGGTAAGGTTGCGC+CGG 0.584245 1.2:-49159162 MS.gene24607:CDS
CTATGCCCGTGTTGAAGGGA+GGG 0.585454 1.2:-49158004 MS.gene24607:CDS
TGCCATGAGGAACAATTGAT+GGG 0.585856 1.2:-49156869 MS.gene24607:CDS
TCAGAATCAACCAACCTCCC+CGG 0.586207 1.2:+49158912 None:intergenic
TGCATCTGCCGTGAAGCACA+TGG 0.586302 1.2:-49156198 MS.gene24607:CDS
AAGGCTCGTGAATTTGGTGC+TGG 0.587291 1.2:-49158201 MS.gene24607:CDS
GCATCCCAAGTAGCACCACC+AGG 0.587445 1.2:+49158852 None:intergenic
TCAACCAACCTCCCCGGCGT+CGG 0.588537 1.2:+49158918 None:intergenic
GAGAACTGTATTGACCTTGT+GGG 0.588815 1.2:-49156665 MS.gene24607:CDS
AACGACCCTTGCAAAGCACC+AGG 0.589295 1.2:+49158657 None:intergenic
TTGATGCTACTCCTGGGAGG+AGG 0.589392 1.2:-49158959 MS.gene24607:CDS
GTTGATTCTGATGCTACACC+GGG 0.590223 1.2:-49158900 MS.gene24607:CDS
TGTGCTCATCCTCTAGTGAT+GGG 0.590227 1.2:+49155910 None:intergenic
GCAGCAGCAGGTGTAGCACC+AGG 0.590830 1.2:+49158732 None:intergenic
TAATCTTCAGGCTTCATGAA+AGG 0.591828 1.2:+49158372 None:intergenic
CGGAGCAGTATAATTTGTTG+AGG 0.592027 1.2:-49158629 MS.gene24607:CDS
AGAATCAACAGCAGAAGAGG+AGG 0.592190 1.2:-49159115 MS.gene24607:CDS
TACCTGCCAGAGAATGGATG+AGG 0.593216 1.2:-49156613 MS.gene24607:CDS
AAGAAACTACAAGCAACTTG+TGG 0.594902 1.2:-49157284 MS.gene24607:CDS
GATTCTAATGCAATGACACC+GGG 0.596128 1.2:-49159017 MS.gene24607:CDS
ACTGTATTGACCTTGTGGGT+AGG 0.597148 1.2:-49156661 MS.gene24607:CDS
GACCCATCAATTGTTCCTCA+TGG 0.598532 1.2:+49156867 None:intergenic
GCAGAAGAGGAGGAATAGAT+GGG 0.600043 1.2:-49159105 MS.gene24607:CDS
CATGGAAACTATTGAGAAGG+TGG 0.601383 1.2:-49157161 MS.gene24607:CDS
CCAGGTGTATAAGCAGCAGC+AGG 0.602735 1.2:+49158720 None:intergenic
TGATTCTAATGCAATGACAC+CGG 0.604172 1.2:-49159018 MS.gene24607:CDS
GCTGCAGTCCGCGAGACCAG+AGG 0.604752 1.2:-49154591 MS.gene24607:CDS
GGTCATGGAAACTATTGAGA+AGG 0.604849 1.2:-49157164 MS.gene24607:CDS
GGAAGCCATTGAAGGGATGA+GGG 0.604873 1.2:-49156069 MS.gene24607:CDS
CAGAATCAGAATCAGGAGGA+AGG 0.608189 1.2:-49159080 MS.gene24607:CDS
GAGTTATTGATGCTACTCCT+GGG 0.608442 1.2:-49158965 MS.gene24607:CDS
TCAAGCTCTTCATCAGTCAA+AGG 0.608967 1.2:+49158576 None:intergenic
CCTTGCAAAGCACCAGGAGT+AGG 0.610768 1.2:+49158663 None:intergenic
AAGAACAACAGCAGAACCCA+AGG 0.611634 1.2:+49156043 None:intergenic
TAGACAATGCACTTAGAACT+GGG 0.611766 1.2:-49154234 MS.gene24607:CDS
GTAGCATCAATAACTCTACC+AGG 0.612375 1.2:+49158972 None:intergenic
GTATATTGGTGAAATGGGAA+AGG 0.614596 1.2:-49156294 MS.gene24607:CDS
ACTATGCCCGTGTTGAAGGG+AGG 0.615072 1.2:-49158005 MS.gene24607:CDS
TCAATAACTCTACCAGGAGT+CGG 0.616410 1.2:+49158978 None:intergenic
GATATCAGTTCTAATATACT+CGG 0.616544 1.2:+49157357 None:intergenic
CCCTGCCCGGAAAGTTAGGG+AGG 0.616795 1.2:-49155994 MS.gene24607:CDS
AGATTTGTGGTACAATCAAG+TGG 0.616908 1.2:-49156970 MS.gene24607:CDS
ACGCCTGGTGGTGTTACACC+TGG 0.617245 1.2:-49158870 MS.gene24607:CDS
TTATTTCCCTCCCTTCAACA+CGG 0.617901 1.2:+49157998 None:intergenic
GCCATAGAGATCTGTGTCGA+AGG 0.618745 1.2:+49159574 None:intergenic
CAGTGCTGGCAAAATTGTGA+AGG 0.621769 1.2:+49156388 None:intergenic
GCTACTCCTAAGCTTAGTGG+TGG 0.624941 1.2:-49158831 MS.gene24607:CDS
GCTGTGATGGAAGCCATTGA+AGG 0.626195 1.2:-49156077 MS.gene24607:CDS
AGATTTCTTACTCTGACAGA+CGG 0.626383 1.2:+49157816 None:intergenic
CTACTTTGGAGGACCAAGAG+AGG 0.627256 1.2:-49158140 MS.gene24607:CDS
CCACCAACAGGAGTAACACC+AGG 0.627500 1.2:+49158702 None:intergenic
GGAAGTGTAACTCCATTACC+TGG 0.628667 1.2:-49158750 MS.gene24607:CDS
CTACTATGATTGCTGCCATG+AGG 0.628805 1.2:-49157945 MS.gene24607:CDS
GGTTGCGCCGGAGAAGGAGA+AGG 0.632056 1.2:-49159150 MS.gene24607:CDS
TGTCTCTGCAACAATAGCAA+TGG 0.633675 1.2:+49156418 None:intergenic
CTGTGATGGAAGCCATTGAA+GGG 0.634079 1.2:-49156076 MS.gene24607:CDS
GGAAGCAAATCCTTAATAGG+TGG 0.634174 1.2:+49156731 None:intergenic
ACTCGGTGTTGAAGCCATTG+TGG 0.634246 1.2:-49157591 MS.gene24607:CDS
GAGTGAACCTTACAGGCGAA+TGG 0.634771 1.2:-49157185 MS.gene24607:CDS
AAACAGTGTGTGAGCACTGA+GGG 0.635126 1.2:-49157388 MS.gene24607:CDS
TGAGGACGCTCTCATGGACA+GGG 0.635895 1.2:-49156243 MS.gene24607:CDS
ATAATCTCAAGGTGCAGGAG+AGG 0.636931 1.2:-49156466 MS.gene24607:CDS
AAAGTAGGCTGCATAAGCAA+CGG 0.637377 1.2:+49158156 None:intergenic
GTGTTGAAGCCATTGTGGAA+GGG 0.637421 1.2:-49157586 MS.gene24607:CDS
TTCATGAAAGGTAAACCACC+AGG 0.637522 1.2:+49158384 None:intergenic
TATGACCGGTGTATGACGGA+AGG 0.638313 1.2:+49159465 None:intergenic
CCCTAACTTTCCGGGCAGGG+TGG 0.640804 1.2:+49155997 None:intergenic
GCTGCAGTCCGCAAGACCAG+AGG 0.641609 1.2:-49154322 MS.gene24607:CDS
TTCCACAAGAGATCTCAGAT+GGG 0.642677 1.2:+49157723 None:intergenic
ACAACAAGAGTGCAAAGGTG+AGG 0.643017 1.2:-49156940 MS.gene24607:CDS
ATCGGCACATAAGAAGCTGG+AGG 0.647881 1.2:+49158516 None:intergenic
TGCAGCATACCCATCACTAG+AGG 0.648920 1.2:-49155919 MS.gene24607:CDS
GTTTCTGCGAGGAATAACTT+CGG 0.652709 1.2:+49159487 None:intergenic
GACGGTTGAGATAGCAAACA+AGG 0.652931 1.2:-49157257 MS.gene24607:CDS
GGCAGTATTCGGTTAAACAA+AGG 0.653268 1.2:+49158177 None:intergenic
TAGTCTTCATCAATCAAAAG+GGG 0.654336 1.2:+49158027 None:intergenic
ATGAATTTGTTACGTCTCGG+AGG 0.654569 1.2:-49159388 MS.gene24607:CDS
CTACTCCTAAGCTTAGTGGT+GGG 0.655445 1.2:-49158830 MS.gene24607:CDS
AATCAGAATCAGGAGGAAGG+TGG 0.655526 1.2:-49159077 MS.gene24607:CDS
ATGAGACACCGACGCCGGGG+AGG 0.656594 1.2:-49158926 MS.gene24607:CDS
GTTAAACAACAAGAGTGCAA+AGG 0.657032 1.2:-49156945 MS.gene24607:CDS
AGAAACCTTCCGTCATACAC+CGG 0.660879 1.2:-49159470 MS.gene24607:CDS
TCATAACGTCGGTCATAACG+TGG 0.660936 1.2:-49159447 MS.gene24607:CDS
TCCACAAGAGATCTCAGATG+GGG 0.662742 1.2:+49157724 None:intergenic
CTAGCGTGTGACATAAAGCA+AGG 0.663677 1.2:+49154352 None:intergenic
TCGGCACATAAGAAGCTGGA+GGG 0.665180 1.2:+49158517 None:intergenic
GGGTAGGATTGCTGATCGTG+GGG 0.665788 1.2:-49156645 MS.gene24607:CDS
CAAGCAACTTGTGGAGACGA+CGG 0.666170 1.2:-49157275 MS.gene24607:CDS
CTAGCGTGCGACATAAAGCA+AGG 0.666593 1.2:+49154621 None:intergenic
TGATAAAGTGGAGTCCCCAA+CGG 0.670541 1.2:+49158456 None:intergenic
ATGGGATGAGACACCGACGC+CGG 0.670705 1.2:-49158931 MS.gene24607:CDS
GATCATCTGATATTGATGCA+AGG 0.673357 1.2:-49157126 MS.gene24607:CDS
GGATCAGAATCAGAATCAGG+AGG 0.675250 1.2:-49159084 MS.gene24607:CDS
TGCCGATTAGGACACCTGCA+AGG 0.675865 1.2:-49158500 MS.gene24607:CDS
TCAGCATAAGACCTAACAGA+CGG 0.678144 1.2:+49159266 None:intergenic
TGCCTAATACCCTTCCACAA+TGG 0.679283 1.2:+49157577 None:intergenic
TTTGTGGTACAATCAAGTGG+AGG 0.684064 1.2:-49156967 MS.gene24607:CDS
CAGATTCCTGAAGAGAATCG+TGG 0.685997 1.2:-49158435 MS.gene24607:CDS
AACAATAGCAATGGCCACAG+TGG 0.686867 1.2:+49156427 None:intergenic
AGAGTTGCCAGGACATCCTG+TGG 0.687187 1.2:+49156494 None:intergenic
TTGATTGTACCACAAATCTG+AGG 0.687976 1.2:+49156974 None:intergenic
TTTGAATGATGAGAATCAGA+AGG 0.688179 1.2:-49157686 MS.gene24607:CDS
CCGGGTGGTGTAACGCCTGG+TGG 0.692520 1.2:-49158882 MS.gene24607:CDS
CCTGGTGGTGTTACACCTGG+TGG 0.693980 1.2:-49158867 MS.gene24607:CDS
GTTCCTAAAGAAGCTCCTGG+TGG 0.695657 1.2:-49158399 MS.gene24607:CDS
ACGCAGCCAGCACCTTACCA+CGG 0.696242 1.2:+49157551 None:intergenic
AGAATGGCACGCCACCGCAG+AGG 0.697269 1.2:-49158251 MS.gene24607:CDS
GTTGAGATAGCAAACAAGGT+CGG 0.698379 1.2:-49157253 MS.gene24607:CDS
AGTGCTGGCAAAATTGTGAA+GGG 0.702395 1.2:+49156389 None:intergenic
GGGATGAGACACCGACGCCG+GGG 0.702741 1.2:-49158929 MS.gene24607:CDS
GATTCTGATGCTACACCGGG+TGG 0.710329 1.2:-49158897 MS.gene24607:CDS
TTATTGATGCTACTCCTGGG+AGG 0.712647 1.2:-49158962 MS.gene24607:CDS
ATACTTGAATGAAATTACAG+AGG 0.713243 1.2:+49154211 None:intergenic
GATCAGCAATCCTACCCACA+AGG 0.716041 1.2:+49156651 None:intergenic
GTGAAGATGATTACCGGAGA+CGG 0.717111 1.2:-49159355 MS.gene24607:CDS
GAGAGCGTCCTCAAGCAAAG+GGG 0.731991 1.2:+49156253 None:intergenic
TCATACACCGGTCATAACGT+CGG 0.735656 1.2:-49159458 MS.gene24607:CDS
TGTCATGAAGCAGTGCCATG+AGG 0.764533 1.2:-49156882 MS.gene24607:CDS
GAAACAGTGTGTGAGCACTG+AGG 0.771981 1.2:-49157389 MS.gene24607:CDS
GAATCGTGTGTGCACCACTG+TGG 0.784014 1.2:-49156441 MS.gene24607:CDS
TATGACGGAAGGTTTCTGCG+AGG 0.791111 1.2:+49159476 None:intergenic
AAGGGTATTAGGCAGCACCG+TGG 0.827285 1.2:-49157568 MS.gene24607:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCTAAATATAACAAACTA+AGG + chr1.2:49158451-49158470 None:intergenic 15.0%
!! AAAATAAAGTCATATCTTCA+AGG + chr1.2:49158422-49158441 None:intergenic 20.0%
!! AAATCATCAATTAGTAGTTA+TGG - chr1.2:49158174-49158193 MS.gene24607:CDS 20.0%
!! ATAACATTGATGAATATGTT+AGG - chr1.2:49155969-49155988 MS.gene24607:CDS 20.0%
!! ATATATAACTCTCTGTATAT+TGG - chr1.2:49157921-49157940 MS.gene24607:CDS 20.0%
!! TCTTTATAAATTGGATGAAT+TGG - chr1.2:49155793-49155812 MS.gene24607:intron 20.0%
!! TGATAGAGTTCTTTATAAAT+TGG - chr1.2:49155784-49155803 MS.gene24607:intron 20.0%
!!! AATAACTTCATTTTGAGAAA+TGG - chr1.2:49158211-49158230 MS.gene24607:CDS 20.0%
!!! TTTGAAGATGAGTTTTAAAT+AGG + chr1.2:49158817-49158836 None:intergenic 20.0%
! AACTCTATTGAATAATCTCA+AGG - chr1.2:49157404-49157423 MS.gene24607:CDS 25.0%
! AATTTCGAAGAAGAAGAAAA+AGG - chr1.2:49154689-49154708 MS.gene24607:intron 25.0%
! AGCTAAGATTTCTTAAATAG+TGG - chr1.2:49159420-49159439 MS.gene24607:CDS 25.0%
! ATAAATTGGATGAATTGGTT+CGG - chr1.2:49155798-49155817 MS.gene24607:intron 25.0%
! GATTTCAATCATCTATGTAT+TGG - chr1.2:49158034-49158053 MS.gene24607:CDS 25.0%
! TACCACTATTTAAGAAAACT+TGG + chr1.2:49159156-49159175 None:intergenic 25.0%
! TCAAAACTTTCAATACCATA+AGG + chr1.2:49156271-49156290 None:intergenic 25.0%
! TGTTAACAATTTATTTCACG+TGG - chr1.2:49158938-49158957 MS.gene24607:CDS 25.0%
! TTACAGAAGTTAAAAACCTA+GGG + chr1.2:49159046-49159065 None:intergenic 25.0%
! TTTGAGTATATTGGTGAAAT+GGG - chr1.2:49157582-49157601 MS.gene24607:CDS 25.0%
!! AAACTTTTCACACAAAAAAG+TGG + chr1.2:49158112-49158131 None:intergenic 25.0%
!! CTGAAGATTATCAGTATTTT+GGG - chr1.2:49155522-49155541 MS.gene24607:intron 25.0%
!! GATATCAGTTCTAATATACT+CGG + chr1.2:49156527-49156546 None:intergenic 25.0%
!! TGAAGATTATCAGTATTTTG+GGG - chr1.2:49155523-49155542 MS.gene24607:intron 25.0%
!!! AGATGAGTTTTAAATAGGAA+TGG + chr1.2:49158812-49158831 None:intergenic 25.0%
!!! ATAATGAATTTGTTACGTCT+CGG - chr1.2:49154490-49154509 MS.gene24607:intron 25.0%
!!! GAAGAAAATTGTTTTGAAAG+TGG - chr1.2:49156468-49156487 MS.gene24607:CDS 25.0%
!!! TATTGCATCGTGTTTTATTT+TGG - chr1.2:49158133-49158152 MS.gene24607:CDS 25.0%
!!! TGATGTTTTAGCGTTTTTAT+AGG - chr1.2:49158287-49158306 MS.gene24607:CDS 25.0%
AAAATTGAACCTAGAACTTC+TGG + chr1.2:49157081-49157100 None:intergenic 30.0%
AAATTGAACCTAGAACTTCT+GGG + chr1.2:49157080-49157099 None:intergenic 30.0%
AAGACACTAGATTACGTTAT+CGG + chr1.2:49158369-49158388 None:intergenic 30.0%
AAGTCGATTGTCAATGTTAT+TGG - chr1.2:49157111-49157130 MS.gene24607:CDS 30.0%
ACAAGAATCTTATGCACATA+AGG + chr1.2:49155824-49155843 None:intergenic 30.0%
AGCTGCCAAATTAATTACAA+AGG + chr1.2:49159404-49159423 None:intergenic 30.0%
AGTAGTCTTCATCAATCAAA+AGG + chr1.2:49155859-49155878 None:intergenic 30.0%
AGTATAATAGCTGGCATATA+AGG + chr1.2:49156395-49156414 None:intergenic 30.0%
ATGCTAATGTGATGCTTAAT+GGG - chr1.2:49156836-49156855 MS.gene24607:CDS 30.0%
CCAAAATACTGATAATCTTC+AGG + chr1.2:49155524-49155543 None:intergenic 30.0%
CTACAACAGTTTATCTTAGA+TGG - chr1.2:49158310-49158329 MS.gene24607:CDS 30.0%
CTATAATAAGCAAAGCCAAA+TGG + chr1.2:49159012-49159031 None:intergenic 30.0%
CTTTGAGTATATTGGTGAAA+TGG - chr1.2:49157581-49157600 MS.gene24607:CDS 30.0%
GACTTCTTTAGTATAATAGC+TGG + chr1.2:49156404-49156423 None:intergenic 30.0%
GAGAGTAGTTTATGAAAACA+AGG - chr1.2:49158639-49158658 MS.gene24607:CDS 30.0%
GGAGAAGTTTCAAATATGTT+TGG + chr1.2:49157771-49157790 None:intergenic 30.0%
GTAGTCTTCATCAATCAAAA+GGG + chr1.2:49155858-49155877 None:intergenic 30.0%
GTTACAGAAGTTAAAAACCT+AGG + chr1.2:49159047-49159066 None:intergenic 30.0%
TAAAAACGCTAAAACATCAC+AGG + chr1.2:49158286-49158305 None:intergenic 30.0%
TAGTCTTCATCAATCAAAAG+GGG + chr1.2:49155857-49155876 None:intergenic 30.0%
TCATCAATGTTATCTATGTC+AGG + chr1.2:49155962-49155981 None:intergenic 30.0%
TCATGCCTATTCTTCAAAAT+TGG + chr1.2:49157186-49157205 None:intergenic 30.0%
TCTTTCCTCTTTGAGTATAT+TGG - chr1.2:49157573-49157592 MS.gene24607:CDS 30.0%
TGCCAATCAGAAAAATAACA+TGG + chr1.2:49159213-49159232 None:intergenic 30.0%
TGCCAATCAGAAAAATAACT+TGG + chr1.2:49159482-49159501 None:intergenic 30.0%
TTTCACCAATATACTCAAAG+AGG + chr1.2:49157581-49157600 None:intergenic 30.0%
TTTGAATGATGAGAATCAGA+AGG - chr1.2:49156195-49156214 MS.gene24607:CDS 30.0%
! AGCCAAGTTTTCTTAAATAG+TGG - chr1.2:49159151-49159170 MS.gene24607:CDS 30.0%
! ATTTTCTTCATTTCTTCGTC+AGG + chr1.2:49156457-49156476 None:intergenic 30.0%
! CCTGAAGATTATCAGTATTT+TGG - chr1.2:49155521-49155540 MS.gene24607:intron 30.0%
! CTTTTGCTTAAAGTGAAGAA+TGG - chr1.2:49155614-49155633 MS.gene24607:intron 30.0%
! TACTCATAATTTGCCATTAG+AGG + chr1.2:49158613-49158632 None:intergenic 30.0%
!! AAAAAATGCTACTTTGGTCT+AGG - chr1.2:49158527-49158546 MS.gene24607:CDS 30.0%
!! ACACGCTTTAGAAATCTAAT+AGG + chr1.2:49158841-49158860 None:intergenic 30.0%
!! CATTGCTTTAGAAAACAATG+TGG - chr1.2:49158242-49158261 MS.gene24607:CDS 30.0%
!! TGACTCCAATTTTGAAGAAT+AGG - chr1.2:49157178-49157197 MS.gene24607:CDS 30.0%
!! TGAGTTTTTCAGAAACTTCT+GGG - chr1.2:49156552-49156571 MS.gene24607:CDS 30.0%
!!! AAGTTATTTTTCTGATTGGC+AGG - chr1.2:49159481-49159500 MS.gene24607:CDS 30.0%
!!! AGAAGTTCTAGGTTCAATTT+TGG - chr1.2:49157080-49157099 MS.gene24607:CDS 30.0%
!!! AGTTATTTTTCTGATTGGCA+GGG - chr1.2:49159482-49159501 MS.gene24607:CDS 30.0%
!!! ATCGTGTTTTATTTTGGTAG+AGG - chr1.2:49158139-49158158 MS.gene24607:CDS 30.0%
!!! ATGTTATTTTTCTGATTGGC+AGG - chr1.2:49159212-49159231 MS.gene24607:CDS 30.0%
!!! CAGCAAATTGCTATTTTGAT+TGG - chr1.2:49156121-49156140 MS.gene24607:CDS 30.0%
!!! GAAGTTCTAGGTTCAATTTT+GGG - chr1.2:49157081-49157100 MS.gene24607:CDS 30.0%
!!! GACCAAGTTATTTTTCTGAT+TGG - chr1.2:49159477-49159496 MS.gene24607:CDS 30.0%
!!! GACCATGTTATTTTTCTGAT+TGG - chr1.2:49159208-49159227 MS.gene24607:CDS 30.0%
!!! TGGTATTGAAAGTTTTGACT+CGG - chr1.2:49156273-49156292 MS.gene24607:CDS 30.0%
!!! TGTTATTTTTCTGATTGGCA+GGG - chr1.2:49159213-49159232 MS.gene24607:CDS 30.0%
!!! TTGTTTTCTAAAGCAATGTG+TGG + chr1.2:49158240-49158259 None:intergenic 30.0%
AAAACCTTATACCCTTCTTG+TGG + chr1.2:49155341-49155360 None:intergenic 35.0%
AAAAGGCTAAGACTTCTGAT+TGG - chr1.2:49154832-49154851 MS.gene24607:intron 35.0%
AAAGATGACTCCACCTATTA+AGG - chr1.2:49157140-49157159 MS.gene24607:CDS 35.0%
AAAGGCTAAGACTTCTGATT+GGG - chr1.2:49154833-49154852 MS.gene24607:intron 35.0%
AAGAAACTACAAGCAACTTG+TGG - chr1.2:49156597-49156616 MS.gene24607:CDS 35.0%
AAGATCTTCTGTTAAACCTC+TGG + chr1.2:49159309-49159328 None:intergenic 35.0%
AAGTCATGCTTATTCTGATC+CGG - chr1.2:49156419-49156438 MS.gene24607:CDS 35.0%
ACACTCCAAGATATTTCACA+TGG - chr1.2:49158911-49158930 MS.gene24607:CDS 35.0%
ACATGTGATAAATGCTGTGA+TGG - chr1.2:49157791-49157810 MS.gene24607:CDS 35.0%
ACTTCCCATGTGAAATATCT+TGG + chr1.2:49158919-49158938 None:intergenic 35.0%
AGACACTAGATTACGTTATC+GGG + chr1.2:49158368-49158387 None:intergenic 35.0%
AGATTTCTTACTCTGACAGA+CGG + chr1.2:49156068-49156087 None:intergenic 35.0%
AGATTTGTGGTACAATCAAG+TGG - chr1.2:49156911-49156930 MS.gene24607:CDS 35.0%
ATCACAGCATTTATCACATG+TGG + chr1.2:49157792-49157811 None:intergenic 35.0%
ATCACCTGAATATCCAACAT+TGG - chr1.2:49158489-49158508 MS.gene24607:CDS 35.0%
ATCTGATATTGATGCAAGGT+TGG - chr1.2:49156759-49156778 MS.gene24607:CDS 35.0%
ATCTTCAAGGTAGAGATAAC+TGG + chr1.2:49158409-49158428 None:intergenic 35.0%
ATGCTATGTTTCCACAAGAA+GGG - chr1.2:49155327-49155346 MS.gene24607:intron 35.0%
ATGTTGGATATTCAGGTGAT+TGG + chr1.2:49158489-49158508 None:intergenic 35.0%
ATTGAATAATCTCAAGGTGC+AGG - chr1.2:49157410-49157429 MS.gene24607:CDS 35.0%
ATTGAATCAGATTCTTTCGC+CGG - chr1.2:49154551-49154570 MS.gene24607:intron 35.0%
CAACAGCAATTCTTGAAATG+AGG + chr1.2:49156981-49157000 None:intergenic 35.0%
CAACAGTTTATCTTAGATGG+TGG - chr1.2:49158313-49158332 MS.gene24607:CDS 35.0%
CACTCCAAGATATTTCACAT+GGG - chr1.2:49158912-49158931 MS.gene24607:CDS 35.0%
CATCTTGATCTTTGTCTCTT+CGG + chr1.2:49155089-49155108 None:intergenic 35.0%
CCAGAACTTAATGTGCAAAA+TGG - chr1.2:49157534-49157553 MS.gene24607:CDS 35.0%
CTCAACAAATTATACTGCTC+CGG + chr1.2:49155254-49155273 None:intergenic 35.0%
CTGGGCCTTTGTAATTAATT+TGG - chr1.2:49159396-49159415 MS.gene24607:CDS 35.0%
CTTGTGGAAATTATAGAGCA+TGG - chr1.2:49156172-49156191 MS.gene24607:CDS 35.0%
GAAGAAGAAGAAAAAGGAAG+AGG - chr1.2:49154695-49154714 MS.gene24607:intron 35.0%
GAAGAGACAAAGATCAAGAT+GGG - chr1.2:49155088-49155107 MS.gene24607:intron 35.0%
GAGTAAAGAAGTGAAAAGTG+AGG + chr1.2:49158769-49158788 None:intergenic 35.0%
GATCATCTGATATTGATGCA+AGG - chr1.2:49156755-49156774 MS.gene24607:CDS 35.0%
GATCTTGTTCGTATATCTGT+TGG - chr1.2:49159323-49159342 MS.gene24607:CDS 35.0%
GATGCTAATGTGATGCTTAA+TGG - chr1.2:49156835-49156854 MS.gene24607:CDS 35.0%
GATTATTCAATAGAGTTGCC+AGG + chr1.2:49157401-49157420 None:intergenic 35.0%
GTATATTGGTGAAATGGGAA+AGG - chr1.2:49157587-49157606 MS.gene24607:CDS 35.0%
GTGGAACATGCATAAAAGTT+AGG + chr1.2:49158093-49158112 None:intergenic 35.0%
GTTCTTAATTACTGTCTCCA+AGG - chr1.2:49157855-49157874 MS.gene24607:CDS 35.0%
GTTGAATGAAGAGAATGAAG+AGG - chr1.2:49155550-49155569 MS.gene24607:intron 35.0%
TAATCTTCAGGCTTCATGAA+AGG + chr1.2:49155512-49155531 None:intergenic 35.0%
TAGACAATGCACTTAGAACT+GGG - chr1.2:49159378-49159397 MS.gene24607:CDS 35.0%
TCACCTGAATATCCAACATT+GGG - chr1.2:49158490-49158509 MS.gene24607:CDS 35.0%
TCGTATATCTGTTGGTATTG+AGG - chr1.2:49159331-49159350 MS.gene24607:CDS 35.0%
TCTGTCAGAGTAAGAAATCT+TGG - chr1.2:49156068-49156087 MS.gene24607:CDS 35.0%
TCTTCAGGAATCTGATAAAG+TGG + chr1.2:49155440-49155459 None:intergenic 35.0%
TGATTCTAATGCAATGACAC+CGG - chr1.2:49154863-49154882 MS.gene24607:intron 35.0%
TGGGTTTATTATTCCGTTGA+TGG - chr1.2:49156366-49156385 MS.gene24607:CDS 35.0%
TTCAAAATTGGAGTCAACCT+GGG + chr1.2:49157174-49157193 None:intergenic 35.0%
TTGATTGTACCACAAATCTG+AGG + chr1.2:49156910-49156929 None:intergenic 35.0%
TTTAGAAAACAATGTGGCGA+AGG - chr1.2:49158248-49158267 MS.gene24607:CDS 35.0%
! AGGAATTGGGAGTTCTAATT+TGG - chr1.2:49159127-49159146 MS.gene24607:CDS 35.0%
! AGTTTCTGAAAAACTCAGGA+AGG + chr1.2:49156549-49156568 None:intergenic 35.0%
! CAGAAGTTTCTGAAAAACTC+AGG + chr1.2:49156553-49156572 None:intergenic 35.0%
! CCATTTTGCACATTAAGTTC+TGG + chr1.2:49157537-49157556 None:intergenic 35.0%
! GTTAAACAACAAGAGTGCAA+AGG - chr1.2:49156936-49156955 MS.gene24607:CDS 35.0%
! TTTGAGGCAGTTAACTGATA+AGG - chr1.2:49155661-49155680 MS.gene24607:intron 35.0%
! TTTTCAGAAACTTCTGGGTT+AGG - chr1.2:49156557-49156576 MS.gene24607:CDS 35.0%
!! AATGTGATGCTTAATGGGTT+CGG - chr1.2:49156841-49156860 MS.gene24607:CDS 35.0%
!! ACAAGAAGGGTATAAGGTTT+TGG - chr1.2:49155340-49155359 MS.gene24607:intron 35.0%
!! AGCAGTATAATTTGTTGAGG+TGG - chr1.2:49155255-49155274 MS.gene24607:intron 35.0%
!! CTGAGTTTTTCAGAAACTTC+TGG - chr1.2:49156551-49156570 MS.gene24607:CDS 35.0%
!! CTGCGTTTTTGAAAGCAATT+GGG - chr1.2:49156347-49156366 MS.gene24607:CDS 35.0%
!! GCAGTATAATTTGTTGAGGT+GGG - chr1.2:49155256-49155275 MS.gene24607:intron 35.0%
!! TCTTTGTTTCTTTTGCCTGA+TGG - chr1.2:49159103-49159122 MS.gene24607:CDS 35.0%
!! TTGGAAGAGCTTTTGATTGA+CGG - chr1.2:49156778-49156797 MS.gene24607:CDS 35.0%
AAAAAGGAAGAGGAAGAAGC+TGG - chr1.2:49154705-49154724 MS.gene24607:intron 40.0%
AAACGCTAAAACATCACAGG+AGG + chr1.2:49158283-49158302 None:intergenic 40.0%
AAAGCAAGGTAGGCTGATTA+GGG + chr1.2:49159249-49159268 None:intergenic 40.0%
AAAGTAGGCTGCATAAGCAA+CGG + chr1.2:49155728-49155747 None:intergenic 40.0%
AAAGTGATCGATTGCATGCT+TGG + chr1.2:49158731-49158750 None:intergenic 40.0%
AAGATGAGAGTGAACCTTAC+AGG - chr1.2:49156689-49156708 MS.gene24607:CDS 40.0%
ACTGATAAGGCTCGTGAATT+TGG - chr1.2:49155674-49155693 MS.gene24607:intron 40.0%
AGAGTTATTGATGCTACTCC+TGG - chr1.2:49154915-49154934 MS.gene24607:intron 40.0%
AGTCATGCTTATTCTGATCC+GGG - chr1.2:49156420-49156439 MS.gene24607:CDS 40.0%
AGTCCCAATGTTGGATATTC+AGG + chr1.2:49158496-49158515 None:intergenic 40.0%
AGTTAAAAACCTAGGGAGGA+TGG + chr1.2:49159039-49159058 None:intergenic 40.0%
ATGCTTAAGGCACACAAGAA+GGG - chr1.2:49157312-49157331 MS.gene24607:CDS 40.0%
ATGGGATCAGAATCAGAATC+AGG - chr1.2:49154794-49154813 MS.gene24607:intron 40.0%
ATTAACAATTCTGACGACGC+TGG - chr1.2:49154465-49154484 MS.gene24607:intron 40.0%
CAGAAGTTAAAAACCTAGGG+AGG + chr1.2:49159043-49159062 None:intergenic 40.0%
CATCAGTAGCAGGAATTGAA+GGG + chr1.2:49154356-49154375 None:intergenic 40.0%
CATGGAAACTATTGAGAAGG+TGG - chr1.2:49156720-49156739 MS.gene24607:CDS 40.0%
CCACAAATCTGAGGAAGATA+TGG + chr1.2:49156901-49156920 None:intergenic 40.0%
CCATATCTTCCTCAGATTTG+TGG - chr1.2:49156898-49156917 MS.gene24607:CDS 40.0%
CGAAGAGACAAAGATCAAGA+TGG - chr1.2:49155087-49155106 MS.gene24607:intron 40.0%
CGTCTTCTCGATTTCATCAT+CGG + chr1.2:49154235-49154254 None:intergenic 40.0%
CTAATCTCAGTAAAGCTGCT+GGG - chr1.2:49155909-49155928 MS.gene24607:CDS 40.0%
CTAGACAATGCACTTAGAAC+TGG - chr1.2:49159377-49159396 MS.gene24607:CDS 40.0%
CTGGGAAGCAAATCCTTAAT+AGG + chr1.2:49157156-49157175 None:intergenic 40.0%
CTTCAAAATTGGAGTCAACC+TGG + chr1.2:49157175-49157194 None:intergenic 40.0%
CTTCTCCAAGATACTCATAC+AGG + chr1.2:49157053-49157072 None:intergenic 40.0%
CTTTCAAGACTACACTTGCT+TGG - chr1.2:49158699-49158718 MS.gene24607:CDS 40.0%
GAGTTATTGATGCTACTCCT+GGG - chr1.2:49154916-49154935 MS.gene24607:intron 40.0%
GATGAAACACCTGCTACTAT+GGG - chr1.2:49155110-49155129 MS.gene24607:intron 40.0%
GATGCTATGTTTCCACAAGA+AGG - chr1.2:49155326-49155345 MS.gene24607:intron 40.0%
GATTCTAATGCAATGACACC+GGG - chr1.2:49154864-49154883 MS.gene24607:intron 40.0%
GCAAGAAGAACGCAAGAAAA+TGG - chr1.2:49154254-49154273 MS.gene24607:CDS 40.0%
GCATATAAGGCTTCCATCAA+CGG + chr1.2:49156382-49156401 None:intergenic 40.0%
GCGTCGTCAGAATTGTTAAT+CGG + chr1.2:49154465-49154484 None:intergenic 40.0%
GGAAGCAAATCCTTAATAGG+TGG + chr1.2:49157153-49157172 None:intergenic 40.0%
GGATATATTGCGAAAGCCAT+CGG - chr1.2:49157363-49157382 MS.gene24607:CDS 40.0%
GGCAGTATTCGGTTAAACAA+AGG + chr1.2:49155707-49155726 None:intergenic 40.0%
GGGATATTGAAGAGAGGAAT+CGG - chr1.2:49155282-49155301 MS.gene24607:intron 40.0%
GGTCATGGAAACTATTGAGA+AGG - chr1.2:49156717-49156736 MS.gene24607:CDS 40.0%
GTAAGAAATCTTGGCAAGCT+CGG - chr1.2:49156077-49156096 MS.gene24607:CDS 40.0%
GTAGCATCAATAACTCTACC+AGG + chr1.2:49154912-49154931 None:intergenic 40.0%
GTTGAGATAGCAAACAAGGT+CGG - chr1.2:49156628-49156647 MS.gene24607:CDS 40.0%
GTTGTCCTGTATGAGTATCT+TGG - chr1.2:49157045-49157064 MS.gene24607:CDS 40.0%
GTTTCTGCGAGGAATAACTT+CGG + chr1.2:49154397-49154416 None:intergenic 40.0%
GTTTCTTCTTCATCAGTAGC+AGG + chr1.2:49154366-49154385 None:intergenic 40.0%
TAAAGCAAGGTAGGCTGATT+AGG + chr1.2:49159250-49159269 None:intergenic 40.0%
TAACCAAAAGATGCCTCTCT+TGG + chr1.2:49155757-49155776 None:intergenic 40.0%
TATCCAACATTGGGACTGAA+CGG - chr1.2:49158499-49158518 MS.gene24607:CDS 40.0%
TCAAGCTCTTCATCAGTCAA+AGG + chr1.2:49155308-49155327 None:intergenic 40.0%
TCAAGGTAGAGATAACTGGT+GGG + chr1.2:49158405-49158424 None:intergenic 40.0%
TCAATAACTCTACCAGGAGT+CGG + chr1.2:49154906-49154925 None:intergenic 40.0%
TCAGCATAAGACCTAACAGA+CGG + chr1.2:49154618-49154637 None:intergenic 40.0%
TCATCAGTAGCAGGAATTGA+AGG + chr1.2:49154357-49154376 None:intergenic 40.0%
TCTAATCTCAGTAAAGCTGC+TGG - chr1.2:49155908-49155927 MS.gene24607:CDS 40.0%
TGAGCTTCTTGAGATGCTTA+AGG - chr1.2:49157299-49157318 MS.gene24607:CDS 40.0%
TGCCATGAGGAACAATTGAT+GGG - chr1.2:49157012-49157031 MS.gene24607:CDS 40.0%
TGTCTCTGCAACAATAGCAA+TGG + chr1.2:49157466-49157485 None:intergenic 40.0%
TTACTCCATGCACAAAACCA+CGG - chr1.2:49158783-49158802 MS.gene24607:CDS 40.0%
TTATTTCCCTCCCTTCAACA+CGG + chr1.2:49155886-49155905 None:intergenic 40.0%
TTCAAGAAGGGCAATAAAGC+AGG + chr1.2:49156043-49156062 None:intergenic 40.0%
TTCAAGGTAGAGATAACTGG+TGG + chr1.2:49158406-49158425 None:intergenic 40.0%
TTCATGAAAGGTAAACCACC+AGG + chr1.2:49155500-49155519 None:intergenic 40.0%
TTCCACAAGAGATCTCAGAT+GGG + chr1.2:49156161-49156180 None:intergenic 40.0%
TTGACCGTGAAGATGATTAC+CGG - chr1.2:49154520-49154539 MS.gene24607:intron 40.0%
TTGCTGCACAATCTTAATCC+CGG + chr1.2:49156107-49156126 None:intergenic 40.0%
TTTCCACAAGAGATCTCAGA+TGG + chr1.2:49156162-49156181 None:intergenic 40.0%
TTTGCCTGATGGTAGGAATT+GGG - chr1.2:49159114-49159133 MS.gene24607:CDS 40.0%
TTTGTGGTACAATCAAGTGG+AGG - chr1.2:49156914-49156933 MS.gene24607:CDS 40.0%
! AGAGCTACTGTGAACACTTT+TGG - chr1.2:49157342-49157361 MS.gene24607:CDS 40.0%
! ATCTGTTGGTATTGAGGATG+TGG - chr1.2:49159337-49159356 MS.gene24607:CDS 40.0%
! CTATTAAGGATTTGCTTCCC+AGG - chr1.2:49157154-49157173 MS.gene24607:CDS 40.0%
! GAACAATTGATGGGTCATCT+TGG - chr1.2:49157021-49157040 MS.gene24607:CDS 40.0%
! GAGAACTGTATTGACCTTGT+GGG - chr1.2:49157216-49157235 MS.gene24607:CDS 40.0%
! GATTTTTCCTTCTCCTTCTC+CGG + chr1.2:49154741-49154760 None:intergenic 40.0%
! GTCAGCAGAAAAGCATATAG+AGG + chr1.2:49159191-49159210 None:intergenic 40.0%
! GTTTCCACAAGAAGGGTATA+AGG - chr1.2:49155334-49155353 MS.gene24607:intron 40.0%
! TCCATTTGCTGAACTATGTC+TGG - chr1.2:49157745-49157764 MS.gene24607:CDS 40.0%
! TGCTTTATTGCCCTTCTTGA+AGG - chr1.2:49156042-49156061 MS.gene24607:CDS 40.0%
! TGTTTCTTTTGCCTGATGGT+AGG - chr1.2:49159107-49159126 MS.gene24607:CDS 40.0%
! TTTTGCCTGATGGTAGGAAT+TGG - chr1.2:49159113-49159132 MS.gene24607:CDS 40.0%
!! AGTGCTGGCAAAATTGTGAA+GGG + chr1.2:49157495-49157514 None:intergenic 40.0%
!! ATAATTTGTTGAGGTGGGAG+AGG - chr1.2:49155261-49155280 MS.gene24607:intron 40.0%
!! ATGAATTTGTTACGTCTCGG+AGG - chr1.2:49154493-49154512 MS.gene24607:intron 40.0%
!! CGGAGCAGTATAATTTGTTG+AGG - chr1.2:49155252-49155271 MS.gene24607:intron 40.0%
!! GCTGCGTTTTTGAAAGCAAT+TGG - chr1.2:49156346-49156365 MS.gene24607:CDS 40.0%
!! GGTGTCATTGCATTAGAATC+AGG + chr1.2:49154864-49154883 None:intergenic 40.0%
!! TAATTTGTTGAGGTGGGAGA+GGG - chr1.2:49155262-49155281 MS.gene24607:intron 40.0%
!!! AGAGAGGCATCTTTTGGTTA+AGG - chr1.2:49155757-49155776 MS.gene24607:intron 40.0%
AAAAACCTAGGGAGGATGGT+AGG + chr1.2:49159035-49159054 None:intergenic 45.0%
AAACCACCAGGAGCTTCTTT+AGG + chr1.2:49155488-49155507 None:intergenic 45.0%
AACAATAGCAATGGCCACAG+TGG + chr1.2:49157457-49157476 None:intergenic 45.0%
AACAATGTGGCGAAGGTTTG+CGG - chr1.2:49158255-49158274 MS.gene24607:CDS 45.0%
AACTCCCAATTCCTACCATC+AGG + chr1.2:49159121-49159140 None:intergenic 45.0%
AAGAACAACAGCAGAACCCA+AGG + chr1.2:49157841-49157860 None:intergenic 45.0%
AATCAGAATCAGGAGGAAGG+TGG - chr1.2:49154804-49154823 MS.gene24607:intron 45.0%
ACAGATCCTCATCCATTCTC+TGG + chr1.2:49157277-49157296 None:intergenic 45.0%
ACCTTCGACACAGATCTCTA+TGG - chr1.2:49154306-49154325 MS.gene24607:CDS 45.0%
ACGTTATGACCGGTGTATGA+CGG + chr1.2:49154423-49154442 None:intergenic 45.0%
ACTACTATGCCCGTGTTGAA+GGG - chr1.2:49155873-49155892 MS.gene24607:intron 45.0%
AGAAACCTTCCGTCATACAC+CGG - chr1.2:49154411-49154430 MS.gene24607:intron 45.0%
AGAATCAACAGCAGAAGAGG+AGG - chr1.2:49154766-49154785 MS.gene24607:intron 45.0%
AGCAGAAGAGGAGGAATAGA+TGG - chr1.2:49154775-49154794 MS.gene24607:intron 45.0%
AGCAGAATCAACAGCAGAAG+AGG - chr1.2:49154763-49154782 MS.gene24607:intron 45.0%
AGTACACCTCCCTAACTTTC+CGG + chr1.2:49157896-49157915 None:intergenic 45.0%
AGTTTGTACCTGCCAGAGAA+TGG - chr1.2:49157262-49157281 MS.gene24607:CDS 45.0%
ATAATCTCAAGGTGCAGGAG+AGG - chr1.2:49157415-49157434 MS.gene24607:CDS 45.0%
ATGCAATGACACCGGGAATA+TGG - chr1.2:49154871-49154890 MS.gene24607:intron 45.0%
ATTCCGTTCAGTCCCAATGT+TGG + chr1.2:49158505-49158524 None:intergenic 45.0%
CAAGGTCAATACAGTTCTCC+TGG + chr1.2:49157215-49157234 None:intergenic 45.0%
CAGAATCAGAATCAGGAGGA+AGG - chr1.2:49154801-49154820 MS.gene24607:intron 45.0%
CAGATTCCTGAAGAGAATCG+TGG - chr1.2:49155446-49155465 MS.gene24607:intron 45.0%
CGATACTCATTCATCAGTGC+TGG + chr1.2:49157510-49157529 None:intergenic 45.0%
CGTGTGACATAAAGCAAGGT+AGG + chr1.2:49159528-49159547 None:intergenic 45.0%
CTAATCGGCACATAAGAAGC+TGG + chr1.2:49155371-49155390 None:intergenic 45.0%
CTACTATGATTGCTGCCATG+AGG - chr1.2:49155936-49155955 MS.gene24607:CDS 45.0%
CTACTCCTAAGCTTAGTGGT+GGG - chr1.2:49155051-49155070 MS.gene24607:intron 45.0%
CTAGCGTGTGACATAAAGCA+AGG + chr1.2:49159532-49159551 None:intergenic 45.0%
CTCTCTGTATATTGGAGCTC+AGG - chr1.2:49157929-49157948 MS.gene24607:CDS 45.0%
CTGACTCTTCAGCACTATAG+AGG - chr1.2:49158973-49158992 MS.gene24607:CDS 45.0%
GAATAGGCATGAGAAAGTCC+AGG - chr1.2:49157194-49157213 MS.gene24607:CDS 45.0%
GAATGAAGAGGAGTTGTCTC+CGG - chr1.2:49155562-49155581 MS.gene24607:intron 45.0%
GACCCATCAATTGTTCCTCA+TGG + chr1.2:49157017-49157036 None:intergenic 45.0%
GACGGTTGAGATAGCAAACA+AGG - chr1.2:49156624-49156643 MS.gene24607:CDS 45.0%
GAGAAGGTGGTCACTAACTT+GGG - chr1.2:49156733-49156752 MS.gene24607:CDS 45.0%
GATCTTTGTCTCTTCGGAGT+CGG + chr1.2:49155083-49155102 None:intergenic 45.0%
GATGCTACTCCTAAGCTTAG+TGG - chr1.2:49155047-49155066 MS.gene24607:intron 45.0%
GATGCTTAAGGCACACAAGA+AGG - chr1.2:49157311-49157330 MS.gene24607:CDS 45.0%
GATGTTCCTAAAGAAGCTCC+TGG - chr1.2:49155479-49155498 MS.gene24607:intron 45.0%
GCAGAAGAGGAGGAATAGAT+GGG - chr1.2:49154776-49154795 MS.gene24607:intron 45.0%
GCATAAGCAACGGCAGTATT+CGG + chr1.2:49155718-49155737 None:intergenic 45.0%
GCCAGACATAGTTCAGCAAA+TGG + chr1.2:49157749-49157768 None:intergenic 45.0%
GGATCAGAATCAGAATCAGG+AGG - chr1.2:49154797-49154816 MS.gene24607:intron 45.0%
GGATGAAACACCTGCTACTA+TGG - chr1.2:49155109-49155128 MS.gene24607:intron 45.0%
GGGAGAGAGAGGAAACAATT+AGG - chr1.2:49154664-49154683 MS.gene24607:intron 45.0%
GTAATCCCACCACTAAGCTT+AGG + chr1.2:49155059-49155078 None:intergenic 45.0%
GTACATTTCCCAAGTACCCA+CGG - chr1.2:49158875-49158894 MS.gene24607:CDS 45.0%
GTCTCCGGTAATCATCTTCA+CGG + chr1.2:49154527-49154546 None:intergenic 45.0%
GTGAAGATGATTACCGGAGA+CGG - chr1.2:49154526-49154545 MS.gene24607:intron 45.0%
GTGCCATGAGGAACAATTGA+TGG - chr1.2:49157011-49157030 MS.gene24607:CDS 45.0%
GTGTTGAAGCCATTGTGGAA+GGG - chr1.2:49156295-49156314 MS.gene24607:CDS 45.0%
GTTACACTTCCCATAGTAGC+AGG + chr1.2:49155122-49155141 None:intergenic 45.0%
GTTATCTATGTCAGGCCTCA+TGG + chr1.2:49155954-49155973 None:intergenic 45.0%
GTTATGACCGACGTTATGAC+CGG + chr1.2:49154433-49154452 None:intergenic 45.0%
GTTGCTTATGCAGCCTACTT+TGG - chr1.2:49155727-49155746 MS.gene24607:intron 45.0%
TAAGACCTAACAGACGGATC+CGG + chr1.2:49154612-49154631 None:intergenic 45.0%
TATTTCCCTCCCTTCAACAC+GGG + chr1.2:49155885-49155904 None:intergenic 45.0%
TCATAACGTCGGTCATAACG+TGG - chr1.2:49154434-49154453 MS.gene24607:intron 45.0%
TCATACACCGGTCATAACGT+CGG - chr1.2:49154423-49154442 MS.gene24607:intron 45.0%
TCCACAAGAGATCTCAGATG+GGG + chr1.2:49156160-49156179 None:intergenic 45.0%
TCTGATTCAATCTCCGTCTC+CGG + chr1.2:49154542-49154561 None:intergenic 45.0%
TCTTGGAGTGTAGATGTCGA+TGG + chr1.2:49158902-49158921 None:intergenic 45.0%
TGAGAAGGTGGTCACTAACT+TGG - chr1.2:49156732-49156751 MS.gene24607:CDS 45.0%
TGATAAAGTGGAGTCCCCAA+CGG + chr1.2:49155428-49155447 None:intergenic 45.0%
TGCAATGACACCGGGAATAT+GGG - chr1.2:49154872-49154891 MS.gene24607:intron 45.0%
TGCCTAATACCCTTCCACAA+TGG + chr1.2:49156307-49156326 None:intergenic 45.0%
TGTGCTCATCCTCTAGTGAT+GGG + chr1.2:49157974-49157993 None:intergenic 45.0%
TTAAATAGGAATGGCTGCCG+TGG + chr1.2:49158803-49158822 None:intergenic 45.0%
TTATTGATGCTACTCCTGGG+AGG - chr1.2:49154919-49154938 MS.gene24607:intron 45.0%
TTCCTCTCTTTCTGCTCATC+CGG + chr1.2:49155584-49155603 None:intergenic 45.0%
TTCCTTGCAGGTGTCCTAAT+CGG + chr1.2:49155386-49155405 None:intergenic 45.0%
TTGTGCTCATCCTCTAGTGA+TGG + chr1.2:49157975-49157994 None:intergenic 45.0%
! AAACTTCTGGGTTAGGAGGA+TGG - chr1.2:49156564-49156583 MS.gene24607:CDS 45.0%
! ACAACAAGAGTGCAAAGGTG+AGG - chr1.2:49156941-49156960 MS.gene24607:CDS 45.0%
! ACTGTATTGACCTTGTGGGT+AGG - chr1.2:49157220-49157239 MS.gene24607:CDS 45.0%
! ATCACTAGTCTGCTCTTGGA+AGG + chr1.2:49156815-49156834 None:intergenic 45.0%
! CATCATCACTAGTCTGCTCT+TGG + chr1.2:49156819-49156838 None:intergenic 45.0%
! CTCAAAGCAGTTTTCCTCTG+CGG + chr1.2:49155647-49155666 None:intergenic 45.0%
! CTGTGATGGAAGCCATTGAA+GGG - chr1.2:49157805-49157824 MS.gene24607:CDS 45.0%
! GGAAGTGTAACTCCATTACC+TGG - chr1.2:49155131-49155150 MS.gene24607:intron 45.0%
! GGAGAACTGTATTGACCTTG+TGG - chr1.2:49157215-49157234 MS.gene24607:CDS 45.0%
! GGAGTACTTGCTAAGCCATT+TGG - chr1.2:49158994-49159013 MS.gene24607:CDS 45.0%
! GGTTGATTCTGATGCTACAC+CGG - chr1.2:49154980-49154999 MS.gene24607:intron 45.0%
! GTTGATTCTGATGCTACACC+GGG - chr1.2:49154981-49155000 MS.gene24607:intron 45.0%
! TCAGAAACTTCTGGGTTAGG+AGG - chr1.2:49156560-49156579 MS.gene24607:CDS 45.0%
! TGGACAGGGATTTGGTTCAT+AGG - chr1.2:49157652-49157671 MS.gene24607:CDS 45.0%
!! AAACAGTGTGTGAGCACTGA+GGG - chr1.2:49156493-49156512 MS.gene24607:CDS 45.0%
!! AGCCATTGTGGAAGGGTATT+AGG - chr1.2:49156302-49156321 MS.gene24607:CDS 45.0%
!! CAGCTTCTTATGTGCCGATT+AGG - chr1.2:49155369-49155388 MS.gene24607:intron 45.0%
!! CAGTGCTGGCAAAATTGTGA+AGG + chr1.2:49157496-49157515 None:intergenic 45.0%
!! CTGTTAAACCTCTGGTCTTG+CGG + chr1.2:49159570-49159589 None:intergenic 45.0%
!! GAAGAGTACCCAGAAGTTCT+AGG - chr1.2:49157069-49157088 MS.gene24607:CDS 45.0%
!! GAGAGATGAAGCGTTGAAGA+GGG - chr1.2:49154644-49154663 MS.gene24607:CDS 45.0%
!! GCAAAAGCATCATGTCGATC+CGG + chr1.2:49154573-49154592 None:intergenic 45.0%
!! GTCGGTGTTGCTGATATTGT+TGG - chr1.2:49156646-49156665 MS.gene24607:CDS 45.0%
!! TCCTGTTGGTGGTGTTGAAT+TGG - chr1.2:49155190-49155209 MS.gene24607:intron 45.0%
!! TGAGAGATGAAGCGTTGAAG+AGG - chr1.2:49154643-49154662 MS.gene24607:CDS 45.0%
ACCTTACAGGCGAATGGTCA+TGG - chr1.2:49156702-49156721 MS.gene24607:CDS 50.0%
ATCCTCATCCATTCTCTGGC+AGG + chr1.2:49157273-49157292 None:intergenic 50.0%
ATCGGCACATAAGAAGCTGG+AGG + chr1.2:49155368-49155387 None:intergenic 50.0%
CAAGCAACTTGTGGAGACGA+CGG - chr1.2:49156606-49156625 MS.gene24607:CDS 50.0%
CGCAGACTGTCAACCTCTAA+TGG - chr1.2:49158597-49158616 MS.gene24607:CDS 50.0%
CGCAGAGGAAAACTGCTTTG+AGG - chr1.2:49155645-49155664 MS.gene24607:intron 50.0%
CGTGCGACATAAAGCAAGGT+AGG + chr1.2:49159259-49159278 None:intergenic 50.0%
CTACTCCTGGTGCTTTGCAA+GGG - chr1.2:49155219-49155238 MS.gene24607:intron 50.0%
CTAGCGTGCGACATAAAGCA+AGG + chr1.2:49159263-49159282 None:intergenic 50.0%
CTCTCTTGGTCCTCCAAAGT+AGG + chr1.2:49155743-49155762 None:intergenic 50.0%
CTGTTAAACCTCTGGTCTCG+CGG + chr1.2:49159301-49159320 None:intergenic 50.0%
GAATTGGCTACACCTACTCC+TGG - chr1.2:49155206-49155225 MS.gene24607:intron 50.0%
GACAGTCTGCGACTAAGTCA+AGG + chr1.2:49158588-49158607 None:intergenic 50.0%
GACTACTATGCCCGTGTTGA+AGG - chr1.2:49155872-49155891 MS.gene24607:intron 50.0%
GAGTGAACCTTACAGGCGAA+TGG - chr1.2:49156696-49156715 MS.gene24607:CDS 50.0%
GATCAGCAATCCTACCCACA+AGG + chr1.2:49157233-49157252 None:intergenic 50.0%
GCCAATTCAACACCACCAAC+AGG + chr1.2:49155194-49155213 None:intergenic 50.0%
GCCATAGAGATCTGTGTCGA+AGG + chr1.2:49154310-49154329 None:intergenic 50.0%
GCTACTCCTAAGCTTAGTGG+TGG - chr1.2:49155050-49155069 MS.gene24607:intron 50.0%
GCTTATGCAGCCTACTTTGG+AGG - chr1.2:49155730-49155749 MS.gene24607:intron 50.0%
GGAAGAGGAAGAAGCTGGTA+AGG - chr1.2:49154710-49154729 MS.gene24607:intron 50.0%
GGAAGCCATTGAAGGGATGA+GGG - chr1.2:49157812-49157831 MS.gene24607:CDS 50.0%
GGAGGAAGGTGGTGTGAAAA+AGG - chr1.2:49154815-49154834 MS.gene24607:intron 50.0%
GGGAGAGGGATATTGAAGAG+AGG - chr1.2:49155276-49155295 MS.gene24607:intron 50.0%
GGTGTAGCATCCCATATTCC+CGG + chr1.2:49154885-49154904 None:intergenic 50.0%
GTACACCTCCCTAACTTTCC+GGG + chr1.2:49157895-49157914 None:intergenic 50.0%
GTAGCAAGAAGCTTCCTTGC+AGG + chr1.2:49155398-49155417 None:intergenic 50.0%
GTGATCGATTGCATGCTTGG+AGG + chr1.2:49158728-49158747 None:intergenic 50.0%
GTTCCTAAAGAAGCTCCTGG+TGG - chr1.2:49155482-49155501 MS.gene24607:intron 50.0%
TACCTGCCAGAGAATGGATG+AGG - chr1.2:49157268-49157287 MS.gene24607:CDS 50.0%
TATAGCCTACCATCCTCCCT+AGG - chr1.2:49159027-49159046 MS.gene24607:CDS 50.0%
TATTAGGCAGCACCGTGGTA+AGG - chr1.2:49156318-49156337 MS.gene24607:CDS 50.0%
TCAGAATCAACCAACCTCCC+CGG + chr1.2:49154972-49154991 None:intergenic 50.0%
TCCATGACCATTCGCCTGTA+AGG + chr1.2:49156706-49156725 None:intergenic 50.0%
TCCTGGGAGGAGGAATAGAT+GGG - chr1.2:49154932-49154951 MS.gene24607:intron 50.0%
TCGGCACATAAGAAGCTGGA+GGG + chr1.2:49155367-49155386 None:intergenic 50.0%
TCTCAGTAAAGCTGCTGGGT+TGG - chr1.2:49155913-49155932 MS.gene24607:CDS 50.0%
TGACAGACGGCCTTCAAGAA+GGG + chr1.2:49156055-49156074 None:intergenic 50.0%
TGCAGCATACCCATCACTAG+AGG - chr1.2:49157962-49157981 MS.gene24607:CDS 50.0%
TGCTGACCACGATTCTCTTC+AGG + chr1.2:49155455-49155474 None:intergenic 50.0%
TGGAAGCCATTGAAGGGATG+AGG - chr1.2:49157811-49157830 MS.gene24607:CDS 50.0%
TGGGTAGGATTGCTGATCGT+GGG - chr1.2:49157235-49157254 MS.gene24607:CDS 50.0%
TGTAGATGTCGATGGACCGT+GGG + chr1.2:49158894-49158913 None:intergenic 50.0%
TGTCATGAAGCAGTGCCATG+AGG - chr1.2:49156999-49157018 MS.gene24607:CDS 50.0%
TTTGCAAGGGTCGTTTACGC+CGG - chr1.2:49155232-49155251 MS.gene24607:intron 50.0%
TTTGCTTGAGGACGCTCTCA+TGG - chr1.2:49157632-49157651 MS.gene24607:CDS 50.0%
! AAAGCAGTTTTCCTCTGCGG+TGG + chr1.2:49155644-49155663 None:intergenic 50.0%
! AGTGTCGTTGCATCTGCTCT+CGG - chr1.2:49156013-49156032 MS.gene24607:CDS 50.0%
! CGACATGATGCTTTTGCTGC+TGG - chr1.2:49154576-49154595 MS.gene24607:CDS 50.0%
! CTACTTTGGAGGACCAAGAG+AGG - chr1.2:49155741-49155760 MS.gene24607:intron 50.0%
! GAAACAGTGTGTGAGCACTG+AGG - chr1.2:49156492-49156511 MS.gene24607:CDS 50.0%
! GCTGTGATGGAAGCCATTGA+AGG - chr1.2:49157804-49157823 MS.gene24607:CDS 50.0%
! GGAAAGTTAGGGAGGTGTAC+TGG - chr1.2:49157895-49157914 MS.gene24607:CDS 50.0%
! GGTGTTGAAGCCATTGTGGA+AGG - chr1.2:49156294-49156313 MS.gene24607:CDS 50.0%
! TATGACCGGTGTATGACGGA+AGG + chr1.2:49154419-49154438 None:intergenic 50.0%
! TATGACGGAAGGTTTCTGCG+AGG + chr1.2:49154408-49154427 None:intergenic 50.0%
!! AAGGCTCGTGAATTTGGTGC+TGG - chr1.2:49155680-49155699 MS.gene24607:intron 50.0%
!! ACACCTGGTGTTACTCCTGT+TGG - chr1.2:49155176-49155195 MS.gene24607:intron 50.0%
!! ACTCGGTGTTGAAGCCATTG+TGG - chr1.2:49156290-49156309 MS.gene24607:CDS 50.0%
!! ATGAGAGCGTCCTCAAGCAA+AGG + chr1.2:49157633-49157652 None:intergenic 50.0%
!! TACACCTGGTGGTGCTACTT+GGG - chr1.2:49155025-49155044 MS.gene24607:intron 50.0%
!! TGAGAGCGTCCTCAAGCAAA+GGG + chr1.2:49157632-49157651 None:intergenic 50.0%
!! TTACACCTGGTGGTGCTACT+TGG - chr1.2:49155024-49155043 MS.gene24607:intron 50.0%
!!! GGACCAAGAGAGGCATCTTT+TGG - chr1.2:49155751-49155770 MS.gene24607:intron 50.0%
AAACGCCGGATCCGTCTGTT+AGG - chr1.2:49154604-49154623 MS.gene24607:CDS 55.0%
ACTATGCCCGTGTTGAAGGG+AGG - chr1.2:49155876-49155895 MS.gene24607:intron 55.0%
AGAAGCTGGTAAGGTTGCGC+CGG - chr1.2:49154719-49154738 MS.gene24607:intron 55.0%
AGAGTTGCCAGGACATCCTG+TGG + chr1.2:49157390-49157409 None:intergenic 55.0%
AGCAGCAGCTTCAGCAAGTG+CGG + chr1.2:49156248-49156267 None:intergenic 55.0%
CCACCAACAGGAGTAACACC+AGG + chr1.2:49155182-49155201 None:intergenic 55.0%
CCAGGTGTATAAGCAGCAGC+AGG + chr1.2:49155164-49155183 None:intergenic 55.0%
CCTACTCCTGGTGCTTTGCA+AGG - chr1.2:49155218-49155237 MS.gene24607:intron 55.0%
CGCTCTCATGGACAGGGATT+TGG - chr1.2:49157644-49157663 MS.gene24607:CDS 55.0%
CGTCAGGTGACTGAAACTCC+CGG + chr1.2:49156441-49156460 None:intergenic 55.0%
CTATGCCCGTGTTGAAGGGA+GGG - chr1.2:49155877-49155896 MS.gene24607:intron 55.0%
CTCCGGATGAGCAGAAAGAG+AGG - chr1.2:49155579-49155598 MS.gene24607:intron 55.0%
CTCCTGGGAGGAGGAATAGA+TGG - chr1.2:49154931-49154950 MS.gene24607:intron 55.0%
CTGACAGACGGCCTTCAAGA+AGG + chr1.2:49156056-49156075 None:intergenic 55.0%
CTTGCTACACCTACGCCGTT+GGG - chr1.2:49155410-49155429 MS.gene24607:intron 55.0%
GAAGGGATGAGGGTAGCCTT+GGG - chr1.2:49157822-49157841 MS.gene24607:CDS 55.0%
GAATCGTGTGTGCACCACTG+TGG - chr1.2:49157440-49157459 MS.gene24607:CDS 55.0%
GATTCTGATGCTACACCGGG+TGG - chr1.2:49154984-49155003 MS.gene24607:intron 55.0%
GCAGGTGTAGCACCAGGTAA+TGG + chr1.2:49155146-49155165 None:intergenic 55.0%
GCGCAGTTGTAAACTCGCTC+GGG - chr1.2:49156863-49156882 MS.gene24607:CDS 55.0%
GCTGAAGCTGCTGCTCCTTA+TGG - chr1.2:49156253-49156272 MS.gene24607:CDS 55.0%
GGCGCAGTTGTAAACTCGCT+CGG - chr1.2:49156862-49156881 MS.gene24607:CDS 55.0%
GGCTACCCTCATCCCTTCAA+TGG + chr1.2:49157820-49157839 None:intergenic 55.0%
GGGTAGGATTGCTGATCGTG+GGG - chr1.2:49157236-49157255 MS.gene24607:CDS 55.0%
GTGGGTAGGATTGCTGATCG+TGG - chr1.2:49157234-49157253 MS.gene24607:CDS 55.0%
GTGTAGATGTCGATGGACCG+TGG + chr1.2:49158895-49158914 None:intergenic 55.0%
TCCCAGTGCCATGTGCTTCA+CGG + chr1.2:49157694-49157713 None:intergenic 55.0%
TCCCATCTATTCCTCCTCCC+AGG + chr1.2:49154936-49154955 None:intergenic 55.0%
TCGATGGACCGTGGGTACTT+GGG + chr1.2:49158886-49158905 None:intergenic 55.0%
TCTTGCTACACCTACGCCGT+TGG - chr1.2:49155409-49155428 MS.gene24607:intron 55.0%
TGAAGGGATGAGGGTAGCCT+TGG - chr1.2:49157821-49157840 MS.gene24607:CDS 55.0%
TGAGGACGCTCTCATGGACA+GGG - chr1.2:49157638-49157657 MS.gene24607:CDS 55.0%
TGCATCTGCCGTGAAGCACA+TGG - chr1.2:49157683-49157702 MS.gene24607:CDS 55.0%
TGCTGCTGGTGAGAAAACGC+CGG - chr1.2:49154590-49154609 MS.gene24607:CDS 55.0%
TGCTGTGACCCCTTTGCTTG+AGG - chr1.2:49157620-49157639 MS.gene24607:CDS 55.0%
TTGAGGACGCTCTCATGGAC+AGG - chr1.2:49157637-49157656 MS.gene24607:CDS 55.0%
TTGATGCTACTCCTGGGAGG+AGG - chr1.2:49154922-49154941 MS.gene24607:intron 55.0%
TTGCTACACCTACGCCGTTG+GGG - chr1.2:49155411-49155430 MS.gene24607:intron 55.0%
! AACGACCCTTGCAAAGCACC+AGG + chr1.2:49155227-49155246 None:intergenic 55.0%
! AGCGTTGAAGAGGGAGAGAG+AGG - chr1.2:49154653-49154672 MS.gene24607:intron 55.0%
! CCTGCTGCTGCTTATACACC+TGG - chr1.2:49155161-49155180 MS.gene24607:intron 55.0%
! CCTTGCAAAGCACCAGGAGT+AGG + chr1.2:49155221-49155240 None:intergenic 55.0%
! CTGGGTTAGGAGGATGGCTT+TGG - chr1.2:49156570-49156589 MS.gene24607:CDS 55.0%
! GCCCCATCTGAGATCTCTTG+TGG - chr1.2:49156156-49156175 MS.gene24607:CDS 55.0%
! TGCCGATTAGGACACCTGCA+AGG - chr1.2:49155381-49155400 MS.gene24607:intron 55.0%
!! AAGGGTATTAGGCAGCACCG+TGG - chr1.2:49156313-49156332 MS.gene24607:CDS 55.0%
!! CCTGGTGTTACTCCTGTTGG+TGG - chr1.2:49155179-49155198 MS.gene24607:intron 55.0%
!! GAGAGCGTCCTCAAGCAAAG+GGG + chr1.2:49157631-49157650 None:intergenic 55.0%
AAGGACTGTTCCACCCTGCC+CGG - chr1.2:49157874-49157893 MS.gene24607:CDS 60.0%
ACCTCCCTAACTTTCCGGGC+AGG + chr1.2:49157891-49157910 None:intergenic 60.0%
ACGCAGCCAGCACCTTACCA+CGG + chr1.2:49156333-49156352 None:intergenic 60.0%
ATGGGATGAGACACCGACGC+CGG - chr1.2:49154950-49154969 MS.gene24607:intron 60.0%
CAGGACATCCTGTGGTCCGA+TGG + chr1.2:49157382-49157401 None:intergenic 60.0%
CATCGGACCACAGGATGTCC+TGG - chr1.2:49157380-49157399 MS.gene24607:CDS 60.0%
CCACCAGGTGTAACACCACC+AGG + chr1.2:49155017-49155036 None:intergenic 60.0%
CCACCCTGCCCGGAAAGTTA+GGG - chr1.2:49157884-49157903 MS.gene24607:CDS 60.0%
CCTCCCTAACTTTCCGGGCA+GGG + chr1.2:49157890-49157909 None:intergenic 60.0%
GCATCCCAAGTAGCACCACC+AGG + chr1.2:49155032-49155051 None:intergenic 60.0%
GCCGTGAAGCACATGGCACT+GGG - chr1.2:49157690-49157709 MS.gene24607:CDS 60.0%
GTCGATGGACCGTGGGTACT+TGG + chr1.2:49158887-49158906 None:intergenic 60.0%
TCCACCCTGCCCGGAAAGTT+AGG - chr1.2:49157883-49157902 MS.gene24607:CDS 60.0%
TCTTGGCAAGCTCGGCACAC+CGG - chr1.2:49156085-49156104 MS.gene24607:CDS 60.0%
TGCCGTGAAGCACATGGCAC+TGG - chr1.2:49157689-49157708 MS.gene24607:CDS 60.0%
TGCGAAAGCCATCGGACCAC+AGG - chr1.2:49157371-49157390 MS.gene24607:CDS 60.0%
TGGTAAGGTTGCGCCGGAGA+AGG - chr1.2:49154725-49154744 MS.gene24607:intron 60.0%
! GAAGCACATGGCACTGGGAG+TGG - chr1.2:49157695-49157714 MS.gene24607:CDS 60.0%
!! ACGCCTGGTGGTGTTACACC+TGG - chr1.2:49155011-49155030 MS.gene24607:intron 60.0%
!! AGTGGCTGGTTTGGGTTGCG+AGG - chr1.2:49157713-49157732 MS.gene24607:CDS 60.0%
!! CCTGGTGGTGTTACACCTGG+TGG - chr1.2:49155014-49155033 MS.gene24607:intron 60.0%
!! GCACTGGGAGTGGCTGGTTT+GGG - chr1.2:49157705-49157724 MS.gene24607:CDS 60.0%
!! GTGTGTGAGCACTGAGGGTG+TGG - chr1.2:49156498-49156517 MS.gene24607:CDS 60.0%
!! TGGGATGCTACACCGACTCC+TGG - chr1.2:49154891-49154910 MS.gene24607:intron 60.0%
!! TTTGGGTTGCGAGGATGCGC+TGG - chr1.2:49157722-49157741 MS.gene24607:CDS 60.0%
!!! GGCTGCCGTGGTTTTGTGCA+TGG + chr1.2:49158791-49158810 None:intergenic 60.0%
ACACCGGGTGGTGTAACGCC+TGG - chr1.2:49154996-49155015 MS.gene24607:intron 65.0%
AGAATGGCACGCCACCGCAG+AGG - chr1.2:49155630-49155649 MS.gene24607:intron 65.0%
AGTGGAGTCCCCAACGGCGT+AGG + chr1.2:49155422-49155441 None:intergenic 65.0%
CCACCAGGCGTTACACCACC+CGG + chr1.2:49155002-49155021 None:intergenic 65.0%
CCCTAACTTTCCGGGCAGGG+TGG + chr1.2:49157887-49157906 None:intergenic 65.0%
CCCTGCCCGGAAAGTTAGGG+AGG - chr1.2:49157887-49157906 MS.gene24607:CDS 65.0%
CTTGGCAAGCTCGGCACACC+GGG - chr1.2:49156086-49156105 MS.gene24607:CDS 65.0%
GCAGCACCGTGGTAAGGTGC+TGG - chr1.2:49156324-49156343 MS.gene24607:CDS 65.0%
GCAGCAGCAGGTGTAGCACC+AGG + chr1.2:49155152-49155171 None:intergenic 65.0%
GCTGCAGTCCGCAAGACCAG+AGG - chr1.2:49159559-49159578 MS.gene24607:CDS 65.0%
GGGCAGGGTGGAACAGTCCT+TGG + chr1.2:49157875-49157894 None:intergenic 65.0%
GGTTGCGCCGGAGAAGGAGA+AGG - chr1.2:49154731-49154750 MS.gene24607:intron 65.0%
TCAACCAACCTCCCCGGCGT+CGG + chr1.2:49154966-49154985 None:intergenic 65.0%
TGGGATGAGACACCGACGCC+GGG - chr1.2:49154951-49154970 MS.gene24607:intron 65.0%
! CACATGGCACTGGGAGTGGC+TGG - chr1.2:49157699-49157718 MS.gene24607:CDS 65.0%
! GGCACTGGGAGTGGCTGGTT+TGG - chr1.2:49157704-49157723 MS.gene24607:CDS 65.0%
!! CTGGTCTTGCGGACTGCAGC+AGG + chr1.2:49159559-49159578 None:intergenic 65.0%
ATGAGACACCGACGCCGGGG+AGG - chr1.2:49154955-49154974 MS.gene24607:intron 70.0%
CCGGGTGGTGTAACGCCTGG+TGG - chr1.2:49154999-49155018 MS.gene24607:intron 70.0%
GCTGCAGTCCGCGAGACCAG+AGG - chr1.2:49159290-49159309 MS.gene24607:CDS 70.0%
GGGATGAGACACCGACGCCG+GGG - chr1.2:49154952-49154971 MS.gene24607:intron 70.0%
! CTGGTCTCGCGGACTGCAGC+AGG + chr1.2:49159290-49159309 None:intergenic 70.0%
GACACCGACGCCGGGGAGGT+TGG - chr1.2:49154959-49154978 MS.gene24607:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 49154225 49159678 49154225 ID=MS.gene24607
chr1.2 mRNA 49154225 49159678 49154225 ID=MS.gene24607.t1;Parent=MS.gene24607
chr1.2 exon 49155898 49159678 49155898 ID=MS.gene24607.t1.exon1;Parent=MS.gene24607.t1
chr1.2 CDS 49155898 49159678 49155898 ID=cds.MS.gene24607.t1;Parent=MS.gene24607.t1
chr1.2 exon 49154559 49154669 49154559 ID=MS.gene24607.t1.exon2;Parent=MS.gene24607.t1
chr1.2 CDS 49154559 49154669 49154559 ID=cds.MS.gene24607.t1;Parent=MS.gene24607.t1
chr1.2 exon 49154225 49154400 49154225 ID=MS.gene24607.t1.exon3;Parent=MS.gene24607.t1
chr1.2 CDS 49154225 49154400 49154225 ID=cds.MS.gene24607.t1;Parent=MS.gene24607.t1
Gene Sequence

>MS.gene24607

ATGGCTTCCGATGATGAAATCGAGAAGACGCAAGAAGAACGCAAGAAAATGGAAAAACAACTCGCATCTCTCACTGAACTCACCTTCGACACAGATCTCTATGGCGATAGCGATAAAGCTTCATACTTCCCTTCAATTCCTGCTACTGATGAAGAAGAAACTCACGATTCCGAAGTTATTCCTCGCAGAAACCTTCCGTCATACACCGGTCATAACGTCGGTCATAACGTGGCTGTTCCGATTAACAATTCTGACGACGCTGGAGATAATGAATTTGTTACGTCTCGGAGGATAATTGACCGTGAAGATGATTACCGGAGACGGAGATTGAATCAGATTCTTTCGCCGGATCGACATGATGCTTTTGCTGCTGGTGAGAAAACGCCGGATCCGTCTGTTAGGTCTTATGCTGATATTATGAGAGATGAAGCGTTGAAGAGGGAGAGAGAGGAAACAATTAGGTTAATTTCGAAGAAGAAGAAAAAGGAAGAGGAAGAAGCTGGTAAGGTTGCGCCGGAGAAGGAGAAGGAAAAATCTCAGCAGAATCAACAGCAGAAGAGGAGGAATAGATGGGATCAGAATCAGAATCAGGAGGAAGGTGGTGTGAAAAAGGCTAAGACTTCTGATTGGGATGCACCTGATTCTAATGCAATGACACCGGGAATATGGGATGCTACACCGACTCCTGGTAGAGTTATTGATGCTACTCCTGGGAGGAGGAATAGATGGGATGAGACACCGACGCCGGGGAGGTTGGTTGATTCTGATGCTACACCGGGTGGTGTAACGCCTGGTGGTGTTACACCTGGTGGTGCTACTTGGGATGCTACTCCTAAGCTTAGTGGTGGGATTACTCCGACTCCGAAGAGACAAAGATCAAGATGGGATGAAACACCTGCTACTATGGGAAGTGTAACTCCATTACCTGGTGCTACACCTGCTGCTGCTTATACACCTGGTGTTACTCCTGTTGGTGGTGTTGAATTGGCTACACCTACTCCTGGTGCTTTGCAAGGGTCGTTTACGCCGGAGCAGTATAATTTGTTGAGGTGGGAGAGGGATATTGAAGAGAGGAATCGGCCTTTGACTGATGAAGAGCTTGATGCTATGTTTCCACAAGAAGGGTATAAGGTTTTGGACCCTCCAGCTTCTTATGTGCCGATTAGGACACCTGCAAGGAAGCTTCTTGCTACACCTACGCCGTTGGGGACTCCACTTTATCAGATTCCTGAAGAGAATCGTGGTCAGCAGTTTGATGTTCCTAAAGAAGCTCCTGGTGGTTTACCTTTCATGAAGCCTGAAGATTATCAGTATTTTGGGGCTTTGTTGAATGAAGAGAATGAAGAGGAGTTGTCTCCGGATGAGCAGAAAGAGAGGAAGATTATGAAGCTTTTGCTTAAAGTGAAGAATGGCACGCCACCGCAGAGGAAAACTGCTTTGAGGCAGTTAACTGATAAGGCTCGTGAATTTGGTGCTGGTCCTTTGTTTAACCGAATACTGCCGTTGCTTATGCAGCCTACTTTGGAGGACCAAGAGAGGCATCTTTTGGTTAAGGTAATTGATAGAGTTCTTTATAAATTGGATGAATTGGTTCGGCCTTATGTGCATAAGATTCTTGTTGTTATTGAGCCCCTTTTGATTGATGAAGACTACTATGCCCGTGTTGAAGGGAGGGAAATAATATCTAATCTCAGTAAAGCTGCTGGGTTGGCTACTATGATTGCTGCCATGAGGCCTGACATAGATAACATTGATGAATATGTTAGGAATACTACTGCTAGAGCTTTTAGTGTCGTTGCATCTGCTCTCGGTATTCCTGCTTTATTGCCCTTCTTGAAGGCCGTCTGTCAGAGTAAGAAATCTTGGCAAGCTCGGCACACCGGGATTAAGATTGTGCAGCAAATTGCTATTTTGATTGGTTGTGCTGTGTTGCCCCATCTGAGATCTCTTGTGGAAATTATAGAGCATGGTTTGAATGATGAGAATCAGAAGGTGAGAACGATTACTGCTTTGTCTCTTGCCGCACTTGCTGAAGCTGCTGCTCCTTATGGTATTGAAAGTTTTGACTCGGTGTTGAAGCCATTGTGGAAGGGTATTAGGCAGCACCGTGGTAAGGTGCTGGCTGCGTTTTTGAAAGCAATTGGGTTTATTATTCCGTTGATGGAAGCCTTATATGCCAGCTATTATACTAAAGAAGTCATGCTTATTCTGATCCGGGAGTTTCAGTCACCTGACGAAGAAATGAAGAAAATTGTTTTGAAAGTGGTGAAACAGTGTGTGAGCACTGAGGGTGTGGAAGCCGAGTATATTAGAACTGATATCCTTCCTGAGTTTTTCAGAAACTTCTGGGTTAGGAGGATGGCTTTGGATAGAAGAAACTACAAGCAACTTGTGGAGACGACGGTTGAGATAGCAAACAAGGTCGGTGTTGCTGATATTGTTGGAAGAATTGTTGAAGATCTTAAAGATGAGAGTGAACCTTACAGGCGAATGGTCATGGAAACTATTGAGAAGGTGGTCACTAACTTGGGATCATCTGATATTGATGCAAGGTTGGAAGAGCTTTTGATTGACGGTATTCTTTATGCCTTCCAAGAGCAGACTAGTGATGATGCTAATGTGATGCTTAATGGGTTCGGCGCAGTTGTAAACTCGCTCGGGCAGAGAGTAAAACCATATCTTCCTCAGATTTGTGGTACAATCAAGTGGAGGTTAAACAACAAGAGTGCAAAGGTGAGGCAGCAAGCAGCAGACCTCATTTCAAGAATTGCTGTTGTCATGAAGCAGTGCCATGAGGAACAATTGATGGGTCATCTTGGTGTTGTCCTGTATGAGTATCTTGGAGAAGAGTACCCAGAAGTTCTAGGTTCAATTTTGGGTGCTCTCAAGTCGATTGTCAATGTTATTGGTATGACAAAGATGACTCCACCTATTAAGGATTTGCTTCCCAGGTTGACTCCAATTTTGAAGAATAGGCATGAGAAAGTCCAGGAGAACTGTATTGACCTTGTGGGTAGGATTGCTGATCGTGGGGCTGAGTTTGTACCTGCCAGAGAATGGATGAGGATCTGTTTTGAGCTTCTTGAGATGCTTAAGGCACACAAGAAGGGAATTCGTAGAGCTACTGTGAACACTTTTGGATATATTGCGAAAGCCATCGGACCACAGGATGTCCTGGCAACTCTATTGAATAATCTCAAGGTGCAGGAGAGGCAGAATCGTGTGTGCACCACTGTGGCCATTGCTATTGTTGCAGAGACATGTTCACCCTTCACAATTTTGCCAGCACTGATGAATGAGTATCGTGTGCCAGAACTTAATGTGCAAAATGGCGTGCTCAAGTCTCTCTCTTTCCTCTTTGAGTATATTGGTGAAATGGGAAAGGACTACATCTATGCTGTGACCCCTTTGCTTGAGGACGCTCTCATGGACAGGGATTTGGTTCATAGGCAGACAGCTGCATCTGCCGTGAAGCACATGGCACTGGGAGTGGCTGGTTTGGGTTGCGAGGATGCGCTGGTCCATTTGCTGAACTATGTCTGGCCAAACATATTTGAAACTTCTCCACATGTGATAAATGCTGTGATGGAAGCCATTGAAGGGATGAGGGTAGCCTTGGGTTCTGCTGTTGTTCTTAATTACTGTCTCCAAGGACTGTTCCACCCTGCCCGGAAAGTTAGGGAGGTGTACTGGAAGATATATAACTCTCTGTATATTGGAGCTCAGGATGCTCTTGTTGCAGCATACCCATCACTAGAGGATGAGCACAACAATGTTTACAGTAGATCAGAGTTGATGATGTTTATTTAGATTTCAATCATCTATGTATTGGTAAGTTCTCTCTGAATTGTAGTATTTTGTTCTGCCTAACTTTTATGCATGTTCCACTTTTTTGTGTGAAAAGTTTCTATTGCATCGTGTTTTATTTTGGTAGAGGTTTTATTTTGCTAAATCATCAATTAGTAGTTATGGCTTGAGATATTGAAAATAACTTCATTTTGAGAAATGGCAACCACACATTGCTTTAGAAAACAATGTGGCGAAGGTTTGCGGAGCCTCCTGTGATGTTTTAGCGTTTTTATAGGCTACAACAGTTTATCTTAGATGGTGGTATTGCACACAAACTTTTTGCTTTTATCTCCCGATAACGTAATCTAGTGTCTTCATTTCACTGACACCCACCAGTTATCTCTACCTTGAAGATATGACTTTATTTTCGTTAGCCTTAGTTTGTTATATTTAGAATAGAGCTTTTATTACTCCAATCACCTGAATATCCAACATTGGGACTGAACGGAATTTAAAAAATGCTACTTTGGTCTAGGACTAATAGCTTTATAGTCTGTAACTAAGTGATCATCCTTGACTTAGTCGCAGACTGTCAACCTCTAATGGCAAATTATGAGTAAAGAAAGAGAGTAGTTTATGAAAACAAGGATTATATTTTACTATCAACACACTTTATACATGATAACTTTCAAGACTACACTTGCTTGGAGACCTCCAAGCATGCAATCGATCACTTTCGATCTCGCACTTTTCCTCACTTTTCACTTCTTTACTCCATGCACAAAACCACGGCAGCCATTCCTATTTAAAACTCATCTTCAAATCCTATTAGATTTCTAAAGCGTGTAGCAATTAATGAAAGTACATTTCCCAAGTACCCACGGTCCATCGACATCTACACTCCAAGATATTTCACATGGGAAGTGTTAACAATTTATTTCACGTGGTGAAAGATAGTGCTGACTCTTCAGCACTATAGAGGAGTACTTGCTAAGCCATTTGGCTTTGCTTATTATAGCCTACCATCCTCCCTAGGTTTTTAACTTCTGTAACTGAATATGTATTCAACATTTTCTTCATTATTGTTGATCTTTGTTTCTTTTGCCTGATGGTAGGAATTGGGAGTTCTAATTTGGCAGCCAAGTTTTCTTAAATAGTGGTAAACATGATGAAGCCTCTATATGCTTTTCTGCTGACCATGTTATTTTTCTGATTGGCAGGGAGTGTAAAATCCCTAATCAGCCTACCTTGCTTTATGTCGCACGCTAGCATACCTGCTGCAGTCCGCGAGACCAGAGGTTTAACAGAAGATCTTGTTCGTATATCTGTTGGTATTGAGGATGTGGATGATCTGATTGCTGATCTAGACAATGCACTTAGAACTGGGCCTTTGTAATTAATTTGGCAGCTAAGATTTCTTAAATAGTGGTAAACATGATGAAGCCTCTATATGCTTTTCTGCTGACCAAGTTATTTTTCTGATTGGCAGGGAGCGTAAAATCCCTAATCAGCCTACCTTGCTTTATGTCACACGCTAGCATACCTGCTGCAGTCCGCAAGACCAGAGGTTTAACAGAAGATCTTGTTCGTATATCTGTTGGTATTGAGGATGTGGATGATCTGATTGCTGATCTAGACAATGCACTTAGAACTGGGCCTCTGTAA

Protein sequence

>MS.gene24607.t1

MASDDEIEKTQEERKKMEKQLASLTELTFDTDLYGDSDKASYFPSIPATDEEETHDSEVIPRRNLPSYTGHNVGHNVAVPINNSDDAGDNEFVTSRRIIDREDDYRRRRLNQILSPDRHDAFAAGEKTPDPSVRSYADIMRDEALKREREETIRLISKKKKKEEEEAGKVAPEKEKEKSQQNQQQKRRNRWDQNQNQEEGGVKKAKTSDWDAPDSNAMTPGIWDATPTPGRVIDATPGRRNRWDETPTPGRLVDSDATPGGVTPGGVTPGGATWDATPKLSGGITPTPKRQRSRWDETPATMGSVTPLPGATPAAAYTPGVTPVGGVELATPTPGALQGSFTPEQYNLLRWERDIEERNRPLTDEELDAMFPQEGYKVLDPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRTDILPEFFRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTILPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGSAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEHNNVYRSVKSLISLPCFMSHASIPAAVRETRGLTEDLVRISVGSVKSLISLPCFMSHASIPAAVRKTRGLTEDLVRISVGIEDVDDLIADLDNALRTGPL