Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24710.t1 | XP_013450120.1 | 96.3 | 217 | 7 | 1 | 1 | 216 | 1 | 217 | 5.00E-102 | 380.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24710.t1 | A0A072U4S8 | 96.3 | 217 | 7 | 1 | 1 | 216 | 1 | 217 | 3.6e-102 | 380.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049321 | MS.gene24710 | 0.805023 | 1.63E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene24710 | -0.808311 | 3.30E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene24710 | -0.803237 | 3.84E-49 | -1.69E-46 |
| MS.gene050284 | MS.gene24710 | 0.895518 | 8.88E-76 | -1.69E-46 |
| MS.gene050287 | MS.gene24710 | 0.996801 | 2.01E-232 | -1.69E-46 |
| MS.gene051752 | MS.gene24710 | 0.917331 | 6.05E-86 | -1.69E-46 |
| MS.gene052190 | MS.gene24710 | -0.816525 | 5.29E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene24710 | -0.803527 | 3.34E-49 | -1.69E-46 |
| MS.gene053054 | MS.gene24710 | 0.80254 | 5.35E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene24710 | 0.834438 | 3.00E-56 | -1.69E-46 |
| MS.gene054468 | MS.gene24710 | -0.805087 | 1.58E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene24710 | -0.814962 | 1.18E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene24710 | -0.843164 | 1.66E-58 | -1.69E-46 |
| MS.gene058625 | MS.gene24710 | -0.806106 | 9.67E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24710.t1 | MTR_7g105130 | 97.696 | 217 | 4 | 1 | 1 | 216 | 1 | 217 | 2.68e-150 | 416 |
| MS.gene24710.t1 | MTR_2g086660 | 47.619 | 105 | 53 | 2 | 114 | 216 | 151 | 255 | 3.34e-20 | 85.9 |
| MS.gene24710.t1 | MTR_2g086660 | 47.059 | 102 | 52 | 2 | 114 | 213 | 151 | 252 | 2.89e-18 | 81.3 |
| MS.gene24710.t1 | MTR_4g132020 | 44.643 | 112 | 48 | 5 | 109 | 214 | 71 | 174 | 9.94e-18 | 77.8 |
| MS.gene24710.t1 | MTR_2g023070 | 34.529 | 223 | 109 | 10 | 13 | 214 | 10 | 216 | 4.45e-15 | 71.6 |
| MS.gene24710.t1 | MTR_2g023390 | 58.000 | 50 | 21 | 0 | 167 | 216 | 107 | 156 | 6.38e-14 | 67.0 |
| MS.gene24710.t1 | MTR_3g052330 | 33.803 | 142 | 66 | 4 | 102 | 216 | 58 | 198 | 8.31e-14 | 67.8 |
| MS.gene24710.t1 | MTR_7g101250 | 61.224 | 49 | 15 | 1 | 168 | 216 | 116 | 160 | 1.55e-11 | 60.8 |
| MS.gene24710.t1 | MTR_2g094410 | 61.224 | 49 | 15 | 1 | 168 | 216 | 112 | 156 | 1.94e-11 | 60.5 |
| MS.gene24710.t1 | MTR_2g018175 | 54.000 | 50 | 21 | 1 | 167 | 216 | 79 | 126 | 2.77e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24710.t1 | AT3G15040 | 49.138 | 116 | 54 | 3 | 105 | 216 | 129 | 243 | 2.11e-20 | 86.3 |
| MS.gene24710.t1 | AT4G21970 | 43.182 | 88 | 49 | 1 | 130 | 216 | 58 | 145 | 1.60e-17 | 76.6 |
| MS.gene24710.t1 | AT3G45210 | 56.667 | 60 | 22 | 1 | 157 | 216 | 93 | 148 | 1.17e-15 | 71.6 |
| MS.gene24710.t1 | AT4G04630 | 46.154 | 104 | 51 | 2 | 118 | 216 | 65 | 168 | 1.27e-14 | 69.3 |
| MS.gene24710.t1 | AT1G29640 | 45.455 | 88 | 37 | 3 | 129 | 216 | 63 | 139 | 3.40e-14 | 67.4 |
| MS.gene24710.t1 | AT1G61930 | 32.710 | 214 | 107 | 8 | 15 | 215 | 13 | 202 | 2.51e-11 | 61.2 |
| MS.gene24710.t1 | AT4G26950 | 37.500 | 144 | 73 | 6 | 74 | 216 | 17 | 144 | 4.86e-11 | 58.9 |
| MS.gene24710.t1 | AT4G26950 | 37.500 | 144 | 73 | 6 | 74 | 216 | 17 | 144 | 4.86e-11 | 58.9 |
Find 86 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGAGGCGGTCGGAGGAGG+AGG | 0.297600 | 7.3:+9531952 | None:intergenic |
| GGCATACTTGCTGTCCTATC+AGG | 0.339956 | 7.3:-9531758 | MS.gene24710:CDS |
| CTCATCGCCGGCGGCGGAGG+TGG | 0.349135 | 7.3:+9531904 | None:intergenic |
| TAGGAAGGTGTGGGGTCCAT+TGG | 0.377476 | 7.3:+9531989 | None:intergenic |
| ATCGCCGGCGGCGGAGGTGG+TGG | 0.387749 | 7.3:+9531907 | None:intergenic |
| GCCGAGGAGGCGGTCGGAGG+AGG | 0.389773 | 7.3:+9531949 | None:intergenic |
| GGAGGCGGTCGGAGGAGGAG+GGG | 0.390821 | 7.3:+9531954 | None:intergenic |
| GGCGGCGGAGGTGGTGGAAG+GGG | 0.395749 | 7.3:+9531913 | None:intergenic |
| GGAGGGGAATCGGCGGTGAT+AGG | 0.396483 | 7.3:+9531970 | None:intergenic |
| CGATTCACCGCGGCGGTTGT+CGG | 0.399183 | 7.3:+9531733 | None:intergenic |
| AATCGACTCGGCGGCATAAT+CGG | 0.409285 | 7.3:+9531575 | None:intergenic |
| CGGAAACGAAGGAATCATTC+TGG | 0.409373 | 7.3:+9531676 | None:intergenic |
| TTCAATCAAGAAAACCGGTT+TGG | 0.414262 | 7.3:+9531357 | None:intergenic |
| GAGCTCATCGCCGGCGGCGG+AGG | 0.421924 | 7.3:+9531901 | None:intergenic |
| GGTCGGAGGAGGAGGGGAAT+CGG | 0.426093 | 7.3:+9531960 | None:intergenic |
| ACCGGTTCAATCAAGAAAAC+CGG | 0.431244 | 7.3:+9531352 | None:intergenic |
| AGCTCCTTCGGTTGAGGTGG+TGG | 0.433129 | 7.3:+9531818 | None:intergenic |
| ATCATATTCTCGGAAGGTCT+TGG | 0.448234 | 7.3:+9531650 | None:intergenic |
| CCTTCACCGGAGCAGATTGT+TGG | 0.453692 | 7.3:+9531600 | None:intergenic |
| TGTTGATGAGCTTGCGGTGT+TGG | 0.456949 | 7.3:-9531537 | MS.gene24710:CDS |
| ATCATTCTGGAAGATGAAAC+GGG | 0.459788 | 7.3:+9531689 | None:intergenic |
| CCGGCGGCGGAGGTGGTGGA+AGG | 0.463410 | 7.3:+9531911 | None:intergenic |
| CGGTGACGAGTTAGCTCCTT+CGG | 0.466851 | 7.3:+9531806 | None:intergenic |
| TCCTCCTCCGACCGCCTCCT+CGG | 0.473339 | 7.3:-9531950 | MS.gene24710:CDS |
| TTCTCGGAAGGTCTTGGTCT+CGG | 0.478965 | 7.3:+9531656 | None:intergenic |
| GGCATAATCGGAACCTTCAC+CGG | 0.480745 | 7.3:+9531587 | None:intergenic |
| GAGATTGTTGCGAGAGGCTC+TGG | 0.482407 | 7.3:-9531473 | MS.gene24710:CDS |
| AACGCTGTTCTGCGCCAAAC+CGG | 0.488010 | 7.3:-9531371 | MS.gene24710:CDS |
| CATCAACATCCCTACGCCTC+GGG | 0.490643 | 7.3:+9531552 | None:intergenic |
| CGGCGGCGGAGGTGGTGGAA+GGG | 0.493874 | 7.3:+9531912 | None:intergenic |
| AGTGAGCTCATCGCCGGCGG+CGG | 0.495744 | 7.3:+9531898 | None:intergenic |
| GGCGGTTGTCGGAGCCTGAT+AGG | 0.495981 | 7.3:+9531744 | None:intergenic |
| CATGGATTGAATCATATTCT+CGG | 0.498530 | 7.3:+9531640 | None:intergenic |
| CGGAGGAGGAGGGGAATCGG+CGG | 0.500841 | 7.3:+9531963 | None:intergenic |
| CCTTCCACCACCTCCGCCGC+CGG | 0.504410 | 7.3:-9531911 | MS.gene24710:CDS |
| AGGAGGCGGTCGGAGGAGGA+GGG | 0.507664 | 7.3:+9531953 | None:intergenic |
| CAACCGCCGCGGTGAATCGC+CGG | 0.517412 | 7.3:-9531729 | MS.gene24710:CDS |
| AAAACCGAAAAGGTAGTTCT+CGG | 0.517462 | 7.3:+9531443 | None:intergenic |
| AACTCCTTCCAAAACCGAAA+AGG | 0.517512 | 7.3:+9531433 | None:intergenic |
| GGGAATCGGCGGTGATAGGA+AGG | 0.518948 | 7.3:+9531974 | None:intergenic |
| AGTTGAAGGCGCCGAGGAGG+CGG | 0.522197 | 7.3:+9531939 | None:intergenic |
| AATCATTCTGGAAGATGAAA+CGG | 0.522636 | 7.3:+9531688 | None:intergenic |
| CAAAGGGAGAGATCTTCGTC+AGG | 0.523089 | 7.3:-9531399 | MS.gene24710:CDS |
| CCAACAATCTGCTCCGGTGA+AGG | 0.523875 | 7.3:-9531600 | MS.gene24710:CDS |
| AGCTTCAGTGAGCTCATCGC+CGG | 0.525383 | 7.3:+9531892 | None:intergenic |
| ATTCTTCCAACAATCTGCTC+CGG | 0.527245 | 7.3:-9531606 | MS.gene24710:CDS |
| GGTGGAAGGGGAGAAGTTGA+AGG | 0.527376 | 7.3:+9531925 | None:intergenic |
| CGAGTTAGCTCCTTCGGTTG+AGG | 0.528148 | 7.3:+9531812 | None:intergenic |
| CGAGTCGATTCCCGAGGCGT+AGG | 0.528775 | 7.3:-9531562 | MS.gene24710:CDS |
| GAGTCGATTCCCGAGGCGTA+GGG | 0.543346 | 7.3:-9531561 | MS.gene24710:CDS |
| CGGCGGTGATAGGAAGGTGT+GGG | 0.546670 | 7.3:+9531980 | None:intergenic |
| TCATCAACATCCCTACGCCT+CGG | 0.557335 | 7.3:+9531551 | None:intergenic |
| GGCGCCGAGGAGGCGGTCGG+AGG | 0.578979 | 7.3:+9531946 | None:intergenic |
| GTTAGCTCCTTCGGTTGAGG+TGG | 0.580450 | 7.3:+9531815 | None:intergenic |
| TGATAGGACAGCAAGTATGC+CGG | 0.581191 | 7.3:+9531760 | None:intergenic |
| CTACGCCTCGGGAATCGACT+CGG | 0.583023 | 7.3:+9531563 | None:intergenic |
| TTCAGTGAGCTCATCGCCGG+CGG | 0.583955 | 7.3:+9531895 | None:intergenic |
| GGAGTTGGAAGAACTCTCAA+AGG | 0.586119 | 7.3:-9531416 | MS.gene24710:CDS |
| GGTGAATCGCCGGTGTTCCG+TGG | 0.595121 | 7.3:-9531719 | MS.gene24710:CDS |
| TGATGATGACGACGACGGCA+AGG | 0.596482 | 7.3:-9531513 | MS.gene24710:CDS |
| TTCAGATTCGGAGCTGTCGG+AGG | 0.599094 | 7.3:+9531853 | None:intergenic |
| AGAAGTTGAAGGCGCCGAGG+AGG | 0.600990 | 7.3:+9531936 | None:intergenic |
| TTCGATCTATCTCAAGACTC+CGG | 0.602739 | 7.3:-9531779 | MS.gene24710:CDS |
| TCGGCGGTGATAGGAAGGTG+TGG | 0.607076 | 7.3:+9531979 | None:intergenic |
| GAGTTGGAAGAACTCTCAAA+GGG | 0.607793 | 7.3:-9531415 | MS.gene24710:CDS |
| GGGGATTTACCACGGAACAC+CGG | 0.607892 | 7.3:+9531710 | None:intergenic |
| GATTGAATCATATTCTCGGA+AGG | 0.610133 | 7.3:+9531644 | None:intergenic |
| GAAGGCGCCGAGGAGGCGGT+CGG | 0.614301 | 7.3:+9531943 | None:intergenic |
| GGGAGAAGTTGAAGGCGCCG+AGG | 0.615412 | 7.3:+9531933 | None:intergenic |
| ACGTCCACCACCTCAACCGA+AGG | 0.622595 | 7.3:-9531822 | MS.gene24710:CDS |
| GGTCTTGGTCTCGGAAACGA+AGG | 0.637188 | 7.3:+9531665 | None:intergenic |
| CCTCATGAGATTGTTGCGAG+AGG | 0.640232 | 7.3:-9531479 | MS.gene24710:CDS |
| CGAAGGAGCTAACTCGTCAC+CGG | 0.643951 | 7.3:-9531805 | MS.gene24710:CDS |
| CTTGAGATAGATCGAAACTC+CGG | 0.644038 | 7.3:+9531786 | None:intergenic |
| CCTCTCGCAACAATCTCATG+AGG | 0.649415 | 7.3:+9531479 | None:intergenic |
| TGCCGCCGAGTCGATTCCCG+AGG | 0.656419 | 7.3:-9531568 | MS.gene24710:CDS |
| TAGGGATGTTGATGAGCTTG+CGG | 0.658353 | 7.3:-9531543 | MS.gene24710:CDS |
| CTCGCAACAATCTCATGAGG+CGG | 0.658511 | 7.3:+9531482 | None:intergenic |
| GGCGGTGATAGGAAGGTGTG+GGG | 0.700557 | 7.3:+9531981 | None:intergenic |
| CATTCTGGAAGATGAAACGG+GGG | 0.702981 | 7.3:+9531691 | None:intergenic |
| TCATTCTGGAAGATGAAACG+GGG | 0.703104 | 7.3:+9531690 | None:intergenic |
| GGAACACCGGCGATTCACCG+CGG | 0.705322 | 7.3:+9531723 | None:intergenic |
| TCAGGCTCCGACAACCGCCG+CGG | 0.710525 | 7.3:-9531740 | MS.gene24710:CDS |
| ACACCGGCGATTCACCGCGG+CGG | 0.716052 | 7.3:+9531726 | None:intergenic |
| CGCCTCGGGAATCGACTCGG+CGG | 0.734091 | 7.3:+9531566 | None:intergenic |
| TTGGATGATGATGACGACGA+CGG | 0.773393 | 7.3:-9531518 | MS.gene24710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATCATTCTGGAAGATGAAA+CGG | + | chr7.3:9531659-9531678 | None:intergenic | 30.0% |
| ! | CATGGATTGAATCATATTCT+CGG | + | chr7.3:9531707-9531726 | None:intergenic | 30.0% |
| !! | TGTTGGAAGAATTTTCTAGT+AGG | + | chr7.3:9531730-9531749 | None:intergenic | 30.0% |
| !!! | ACGTTGTTGATTTTCAGATT+CGG | + | chr7.3:9531506-9531525 | None:intergenic | 30.0% |
| AAAACCGAAAAGGTAGTTCT+CGG | + | chr7.3:9531904-9531923 | None:intergenic | 35.0% | |
| GATTGAATCATATTCTCGGA+AGG | + | chr7.3:9531703-9531722 | None:intergenic | 35.0% | |
| ! | ATCATTCTGGAAGATGAAAC+GGG | + | chr7.3:9531658-9531677 | None:intergenic | 35.0% |
| ! | CTGAAGCTGAACTTTTTAAC+TGG | - | chr7.3:9531467-9531486 | MS.gene24710:CDS | 35.0% |
| !! | GAAGAATTTTCTAGTAGGCA+TGG | + | chr7.3:9531725-9531744 | None:intergenic | 35.0% |
| AACTCCTTCCAAAACCGAAA+AGG | + | chr7.3:9531914-9531933 | None:intergenic | 40.0% | |
| ATCATATTCTCGGAAGGTCT+TGG | + | chr7.3:9531697-9531716 | None:intergenic | 40.0% | |
| ATTCTTCCAACAATCTGCTC+CGG | - | chr7.3:9531738-9531757 | MS.gene24710:CDS | 40.0% | |
| CTTGAGATAGATCGAAACTC+CGG | + | chr7.3:9531561-9531580 | None:intergenic | 40.0% | |
| GAGTTGGAAGAACTCTCAAA+GGG | - | chr7.3:9531929-9531948 | MS.gene24710:CDS | 40.0% | |
| TTCGATCTATCTCAAGACTC+CGG | - | chr7.3:9531565-9531584 | MS.gene24710:CDS | 40.0% | |
| ! | ATTTTCAGATTCGGAGCTGT+CGG | + | chr7.3:9531497-9531516 | None:intergenic | 40.0% |
| ! | GAGAACTACCTTTTCGGTTT+TGG | - | chr7.3:9531903-9531922 | MS.gene24710:CDS | 40.0% |
| ! | TCATTCTGGAAGATGAAACG+GGG | + | chr7.3:9531657-9531676 | None:intergenic | 40.0% |
| !!! | ACTACCTTTTCGGTTTTGGA+AGG | - | chr7.3:9531907-9531926 | MS.gene24710:CDS | 40.0% |
| !!! | TTTTCGGTTTTGGAAGGAGT+TGG | - | chr7.3:9531913-9531932 | MS.gene24710:CDS | 40.0% |
| ATGAAACGGGGGATTTACCA+CGG | + | chr7.3:9531645-9531664 | None:intergenic | 45.0% | |
| CGGAAACGAAGGAATCATTC+TGG | + | chr7.3:9531671-9531690 | None:intergenic | 45.0% | |
| GGAGTTGGAAGAACTCTCAA+AGG | - | chr7.3:9531928-9531947 | MS.gene24710:CDS | 45.0% | |
| TGATAGGACAGCAAGTATGC+CGG | + | chr7.3:9531587-9531606 | None:intergenic | 45.0% | |
| ! | CATTCTGGAAGATGAAACGG+GGG | + | chr7.3:9531656-9531675 | None:intergenic | 45.0% |
| ! | TAGGGATGTTGATGAGCTTG+CGG | - | chr7.3:9531801-9531820 | MS.gene24710:CDS | 45.0% |
| ! | TTCGCCGAGAACTACCTTTT+CGG | - | chr7.3:9531897-9531916 | MS.gene24710:CDS | 45.0% |
| ! | TTGGATGATGATGACGACGA+CGG | - | chr7.3:9531826-9531845 | MS.gene24710:CDS | 45.0% |
| CAAAGGGAGAGATCTTCGTC+AGG | - | chr7.3:9531945-9531964 | MS.gene24710:CDS | 50.0% | |
| CCTCATGAGATTGTTGCGAG+AGG | - | chr7.3:9531865-9531884 | MS.gene24710:CDS | 50.0% | |
| CCTCTCGCAACAATCTCATG+AGG | + | chr7.3:9531868-9531887 | None:intergenic | 50.0% | |
| CTCGCAACAATCTCATGAGG+CGG | + | chr7.3:9531865-9531884 | None:intergenic | 50.0% | |
| GGCATAATCGGAACCTTCAC+CGG | + | chr7.3:9531760-9531779 | None:intergenic | 50.0% | |
| TCATCAACATCCCTACGCCT+CGG | + | chr7.3:9531796-9531815 | None:intergenic | 50.0% | |
| TTCTCGGAAGGTCTTGGTCT+CGG | + | chr7.3:9531691-9531710 | None:intergenic | 50.0% | |
| ! | TGTTGATGAGCTTGCGGTGT+TGG | - | chr7.3:9531807-9531826 | MS.gene24710:CDS | 50.0% |
| !! | AATCGACTCGGCGGCATAAT+CGG | + | chr7.3:9531772-9531791 | None:intergenic | 50.0% |
| !! | GGCATACTTGCTGTCCTATC+AGG | - | chr7.3:9531586-9531605 | MS.gene24710:CDS | 50.0% |
| AACGCTGTTCTGCGCCAAAC+CGG | - | chr7.3:9531973-9531992 | MS.gene24710:CDS | 55.0% | |
| AGCTTCAGTGAGCTCATCGC+CGG | + | chr7.3:9531455-9531474 | None:intergenic | 55.0% | |
| CATCAACATCCCTACGCCTC+GGG | + | chr7.3:9531795-9531814 | None:intergenic | 55.0% | |
| CCAACAATCTGCTCCGGTGA+AGG | - | chr7.3:9531744-9531763 | MS.gene24710:CDS | 55.0% | |
| CCTTCACCGGAGCAGATTGT+TGG | + | chr7.3:9531747-9531766 | None:intergenic | 55.0% | |
| CGAAGGAGCTAACTCGTCAC+CGG | - | chr7.3:9531539-9531558 | MS.gene24710:CDS | 55.0% | |
| CGAGTTAGCTCCTTCGGTTG+AGG | + | chr7.3:9531535-9531554 | None:intergenic | 55.0% | |
| CGGTGACGAGTTAGCTCCTT+CGG | + | chr7.3:9531541-9531560 | None:intergenic | 55.0% | |
| GAGATTGTTGCGAGAGGCTC+TGG | - | chr7.3:9531871-9531890 | MS.gene24710:CDS | 55.0% | |
| GGGGATTTACCACGGAACAC+CGG | + | chr7.3:9531637-9531656 | None:intergenic | 55.0% | |
| GGTCTTGGTCTCGGAAACGA+AGG | + | chr7.3:9531682-9531701 | None:intergenic | 55.0% | |
| GGTGGAAGGGGAGAAGTTGA+AGG | + | chr7.3:9531422-9531441 | None:intergenic | 55.0% | |
| GTTAGCTCCTTCGGTTGAGG+TGG | + | chr7.3:9531532-9531551 | None:intergenic | 55.0% | |
| TTCAGATTCGGAGCTGTCGG+AGG | + | chr7.3:9531494-9531513 | None:intergenic | 55.0% | |
| ! | TGATGATGACGACGACGGCA+AGG | - | chr7.3:9531831-9531850 | MS.gene24710:CDS | 55.0% |
| ACGTCCACCACCTCAACCGA+AGG | - | chr7.3:9531522-9531541 | MS.gene24710:CDS | 60.0% | |
| AGCTCCTTCGGTTGAGGTGG+TGG | + | chr7.3:9531529-9531548 | None:intergenic | 60.0% | |
| CTACGCCTCGGGAATCGACT+CGG | + | chr7.3:9531784-9531803 | None:intergenic | 60.0% | |
| GGGAATCGGCGGTGATAGGA+AGG | + | chr7.3:9531373-9531392 | None:intergenic | 60.0% | |
| TCGGCGGTGATAGGAAGGTG+TGG | + | chr7.3:9531368-9531387 | None:intergenic | 60.0% | |
| TTCAGTGAGCTCATCGCCGG+CGG | + | chr7.3:9531452-9531471 | None:intergenic | 60.0% | |
| ! | CGGCGGTGATAGGAAGGTGT+GGG | + | chr7.3:9531367-9531386 | None:intergenic | 60.0% |
| ! | GAGTCGATTCCCGAGGCGTA+GGG | - | chr7.3:9531783-9531802 | MS.gene24710:CDS | 60.0% |
| ! | GGCGGTGATAGGAAGGTGTG+GGG | + | chr7.3:9531366-9531385 | None:intergenic | 60.0% |
| !! | AGAAGTTGAAGGCGCCGAGG+AGG | + | chr7.3:9531411-9531430 | None:intergenic | 60.0% |
| CGATTCACCGCGGCGGTTGT+CGG | + | chr7.3:9531614-9531633 | None:intergenic | 65.0% | |
| GGAACACCGGCGATTCACCG+CGG | + | chr7.3:9531624-9531643 | None:intergenic | 65.0% | |
| GGAGGGGAATCGGCGGTGAT+AGG | + | chr7.3:9531377-9531396 | None:intergenic | 65.0% | |
| GGCGGTTGTCGGAGCCTGAT+AGG | + | chr7.3:9531603-9531622 | None:intergenic | 65.0% | |
| GGTCGGAGGAGGAGGGGAAT+CGG | + | chr7.3:9531387-9531406 | None:intergenic | 65.0% | |
| GGTGAATCGCCGGTGTTCCG+TGG | - | chr7.3:9531625-9531644 | MS.gene24710:CDS | 65.0% | |
| ! | CGAGTCGATTCCCGAGGCGT+AGG | - | chr7.3:9531782-9531801 | MS.gene24710:CDS | 65.0% |
| !! | AGTTGAAGGCGCCGAGGAGG+CGG | + | chr7.3:9531408-9531427 | None:intergenic | 65.0% |
| !! | GGGAGAAGTTGAAGGCGCCG+AGG | + | chr7.3:9531414-9531433 | None:intergenic | 65.0% |
| ACACCGGCGATTCACCGCGG+CGG | + | chr7.3:9531621-9531640 | None:intergenic | 70.0% | |
| AGGAGGCGGTCGGAGGAGGA+GGG | + | chr7.3:9531394-9531413 | None:intergenic | 70.0% | |
| AGTGAGCTCATCGCCGGCGG+CGG | + | chr7.3:9531449-9531468 | None:intergenic | 70.0% | |
| CAACCGCCGCGGTGAATCGC+CGG | - | chr7.3:9531615-9531634 | MS.gene24710:CDS | 70.0% | |
| CGGAGGAGGAGGGGAATCGG+CGG | + | chr7.3:9531384-9531403 | None:intergenic | 70.0% | |
| TCAGGCTCCGACAACCGCCG+CGG | - | chr7.3:9531604-9531623 | MS.gene24710:CDS | 70.0% | |
| TCCTCCTCCGACCGCCTCCT+CGG | - | chr7.3:9531394-9531413 | MS.gene24710:CDS | 70.0% | |
| ! | TGCCGCCGAGTCGATTCCCG+AGG | - | chr7.3:9531776-9531795 | MS.gene24710:CDS | 70.0% |
| !! | CGCCTCGGGAATCGACTCGG+CGG | + | chr7.3:9531781-9531800 | None:intergenic | 70.0% |
| CCTTCCACCACCTCCGCCGC+CGG | - | chr7.3:9531433-9531452 | MS.gene24710:CDS | 75.0% | |
| GAGGAGGCGGTCGGAGGAGG+AGG | + | chr7.3:9531395-9531414 | None:intergenic | 75.0% | |
| GGAGGCGGTCGGAGGAGGAG+GGG | + | chr7.3:9531393-9531412 | None:intergenic | 75.0% | |
| !! | CGGCGGCGGAGGTGGTGGAA+GGG | + | chr7.3:9531435-9531454 | None:intergenic | 75.0% |
| !! | GAAGGCGCCGAGGAGGCGGT+CGG | + | chr7.3:9531404-9531423 | None:intergenic | 75.0% |
| !! | GGCGGCGGAGGTGGTGGAAG+GGG | + | chr7.3:9531434-9531453 | None:intergenic | 75.0% |
| ! | ATCGCCGGCGGCGGAGGTGG+TGG | + | chr7.3:9531440-9531459 | None:intergenic | 80.0% |
| ! | CTCATCGCCGGCGGCGGAGG+TGG | + | chr7.3:9531443-9531462 | None:intergenic | 80.0% |
| ! | GAGCTCATCGCCGGCGGCGG+AGG | + | chr7.3:9531446-9531465 | None:intergenic | 80.0% |
| ! | GCCGAGGAGGCGGTCGGAGG+AGG | + | chr7.3:9531398-9531417 | None:intergenic | 80.0% |
| !!! | CCGGCGGCGGAGGTGGTGGA+AGG | + | chr7.3:9531436-9531455 | None:intergenic | 80.0% |
| !! | GGCGCCGAGGAGGCGGTCGG+AGG | + | chr7.3:9531401-9531420 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 9531358 | 9532008 | 9531358 | ID=MS.gene24710 |
| chr7.3 | mRNA | 9531358 | 9532008 | 9531358 | ID=MS.gene24710.t1;Parent=MS.gene24710 |
| chr7.3 | exon | 9531358 | 9532008 | 9531358 | ID=MS.gene24710.t1.exon1;Parent=MS.gene24710.t1 |
| chr7.3 | CDS | 9531358 | 9532008 | 9531358 | ID=cds.MS.gene24710.t1;Parent=MS.gene24710.t1 |
| Gene Sequence |
| Protein sequence |
