Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25274.t1 | XP_003628621.2 | 95.1 | 123 | 6 | 0 | 1 | 123 | 559 | 681 | 2.10E-59 | 238.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25274.t1 | O48686 | 74.8 | 123 | 31 | 0 | 1 | 123 | 497 | 619 | 1.0e-49 | 198.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25274.t1 | G7LEQ2 | 95.1 | 123 | 6 | 0 | 1 | 123 | 559 | 681 | 1.5e-59 | 238.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene25274 | 0.802653 | 5.07E-49 | -1.69E-46 |
| MS.gene049382 | MS.gene25274 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene25274 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene25274 | 0.830414 | 2.98E-55 | -1.69E-46 |
| MS.gene051102 | MS.gene25274 | 0.813856 | 2.07E-51 | -1.69E-46 |
| MS.gene051180 | MS.gene25274 | 0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene25274 | 0.827857 | 1.24E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene25274 | 0.828038 | 1.12E-54 | -1.69E-46 |
| MS.gene053565 | MS.gene25274 | 0.816164 | 6.37E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene25274 | 0.806839 | 6.77E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene25274 | 0.801683 | 8.02E-49 | -1.69E-46 |
| MS.gene056643 | MS.gene25274 | 0.820625 | 6.21E-53 | -1.69E-46 |
| MS.gene056760 | MS.gene25274 | 0.810683 | 1.02E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene25274 | 0.838138 | 3.44E-57 | -1.69E-46 |
| MS.gene059335 | MS.gene25274 | 0.800806 | 1.21E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene25274 | 0.832186 | 1.09E-55 | -1.69E-46 |
| MS.gene059725 | MS.gene25274 | 0.808897 | 2.47E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene25274 | 0.807356 | 5.26E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25274.t1 | MTR_8g062700 | 95.122 | 123 | 6 | 0 | 1 | 123 | 558 | 680 | 2.40e-76 | 249 |
| MS.gene25274.t1 | MTR_8g062700 | 95.122 | 123 | 6 | 0 | 1 | 123 | 559 | 681 | 2.41e-76 | 249 |
| MS.gene25274.t1 | MTR_5g036670 | 74.797 | 123 | 31 | 0 | 1 | 123 | 555 | 677 | 1.71e-60 | 204 |
| MS.gene25274.t1 | MTR_6g008970 | 64.228 | 123 | 44 | 0 | 1 | 123 | 541 | 663 | 3.38e-52 | 180 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25274.t1 | AT1G24190 | 74.797 | 123 | 31 | 0 | 1 | 123 | 497 | 619 | 3.29e-61 | 206 |
| MS.gene25274.t1 | AT1G24190 | 74.797 | 123 | 31 | 0 | 1 | 123 | 493 | 615 | 3.50e-61 | 206 |
| MS.gene25274.t1 | AT1G24190 | 74.797 | 123 | 31 | 0 | 1 | 123 | 493 | 615 | 3.77e-61 | 206 |
| MS.gene25274.t1 | AT1G70060 | 73.171 | 123 | 33 | 0 | 1 | 123 | 511 | 633 | 3.52e-59 | 200 |
| MS.gene25274.t1 | AT1G70060 | 73.171 | 123 | 33 | 0 | 1 | 123 | 511 | 633 | 3.52e-59 | 200 |
| MS.gene25274.t1 | AT1G59890 | 73.984 | 123 | 32 | 0 | 1 | 123 | 386 | 508 | 2.19e-58 | 197 |
| MS.gene25274.t1 | AT1G59890 | 73.984 | 123 | 32 | 0 | 1 | 123 | 382 | 504 | 2.34e-58 | 197 |
| MS.gene25274.t1 | AT1G59890 | 73.984 | 123 | 32 | 0 | 1 | 123 | 391 | 513 | 2.47e-58 | 197 |
| MS.gene25274.t1 | AT1G59890 | 73.984 | 123 | 32 | 0 | 1 | 123 | 386 | 508 | 2.54e-58 | 197 |
| MS.gene25274.t1 | AT1G10450 | 70.732 | 123 | 36 | 0 | 1 | 123 | 369 | 491 | 2.32e-54 | 186 |
| MS.gene25274.t1 | AT1G10450 | 70.732 | 123 | 36 | 0 | 1 | 123 | 369 | 491 | 2.32e-54 | 186 |
| MS.gene25274.t1 | AT1G10450 | 70.732 | 123 | 36 | 0 | 1 | 123 | 420 | 542 | 2.69e-54 | 186 |
| MS.gene25274.t1 | AT5G15020 | 65.041 | 123 | 43 | 0 | 1 | 123 | 533 | 655 | 4.25e-52 | 179 |
| MS.gene25274.t1 | AT5G15020 | 65.041 | 123 | 43 | 0 | 1 | 123 | 533 | 655 | 4.50e-52 | 179 |
| MS.gene25274.t1 | AT3G01320 | 61.789 | 123 | 47 | 0 | 1 | 123 | 538 | 660 | 1.31e-48 | 169 |
| MS.gene25274.t1 | AT3G01320 | 61.789 | 123 | 47 | 0 | 1 | 123 | 526 | 648 | 1.39e-48 | 169 |
Find 49 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTATTGAGGAGCATTTATC+AGG | 0.277753 | 8.3:+39902986 | MS.gene25274:CDS |
| GTGCAGAGTTTAATATAGTT+TGG | 0.279806 | 8.3:+39903267 | MS.gene25274:CDS |
| GAATGCATCTCTAGCCTTGC+CGG | 0.346779 | 8.3:+39903196 | MS.gene25274:CDS |
| TGCAGAGTTTAATATAGTTT+GGG | 0.348281 | 8.3:+39903268 | MS.gene25274:CDS |
| ACTCCTCCTGTTTCTGCTTC+AGG | 0.353246 | 8.3:-39903232 | None:intergenic |
| GTTAATGATGATGTAATTCC+AGG | 0.355314 | 8.3:+39902950 | MS.gene25274:CDS |
| GGATGGTGCTGTTACTGTTC+AGG | 0.386199 | 8.3:+39903925 | MS.gene25274:CDS |
| AAATGCTCCTCAATACGAAT+TGG | 0.386991 | 8.3:-39902980 | None:intergenic |
| GAGCAGGCTGTCGACGGGAC+TGG | 0.402053 | 8.3:+39903963 | MS.gene25274:CDS |
| AACCCGCCTGAAGCAGAAAC+AGG | 0.442327 | 8.3:+39903226 | MS.gene25274:CDS |
| AGGTGCATTGAACGACTATA+CGG | 0.453204 | 8.3:+39903137 | MS.gene25274:CDS |
| ATACGAATTGGAATATCTCC+TGG | 0.466439 | 8.3:-39902968 | None:intergenic |
| AGATATTCCAATTCGTATTG+AGG | 0.495294 | 8.3:+39902973 | MS.gene25274:CDS |
| GAGAAAAGACATTATTTCAA+AGG | 0.496041 | 8.3:+39903904 | MS.gene25274:CDS |
| AAAGACATTATTTCAAAGGA+TGG | 0.504914 | 8.3:+39903908 | MS.gene25274:CDS |
| CGGGACTGGAGCGGAGATTG+TGG | 0.507792 | 8.3:+39903977 | MS.gene25274:CDS |
| CTCCTGTTTCTGCTTCAGGC+GGG | 0.509322 | 8.3:-39903228 | None:intergenic |
| AGTTACACCGGCGGGATCAC+TGG | 0.518021 | 8.3:-39903867 | None:intergenic |
| CAAATACTTGGCTGAAGTGA+AGG | 0.518215 | 8.3:+39903817 | MS.gene25274:CDS |
| TTCAGGCGGGTTAATATCAC+CGG | 0.529652 | 8.3:-39903215 | None:intergenic |
| CCTCCTGTTTCTGCTTCAGG+CGG | 0.534175 | 8.3:-39903229 | None:intergenic |
| GAAGGTGAGGAAGGCAGCCG+AGG | 0.543484 | 8.3:+39903835 | MS.gene25274:CDS |
| TTCTGAGAGAAACAAATACT+TGG | 0.543933 | 8.3:+39903805 | MS.gene25274:CDS |
| TGACCATGGGCTTGATGTGA+TGG | 0.544947 | 8.3:+39903160 | MS.gene25274:CDS |
| AGCTTCGAGCAGGCTGTCGA+CGG | 0.546334 | 8.3:+39903957 | MS.gene25274:CDS |
| GCTTCGAGCAGGCTGTCGAC+GGG | 0.549946 | 8.3:+39903958 | MS.gene25274:CDS |
| GTTGATACGGAGCTTCGAGC+AGG | 0.550606 | 8.3:+39903947 | MS.gene25274:CDS |
| GAACGACTATACGGTGACCA+TGG | 0.550770 | 8.3:+39903146 | MS.gene25274:CDS |
| TGTTACTGTTCAGGTTGATA+CGG | 0.551073 | 8.3:+39903934 | MS.gene25274:CDS |
| GGCTGAAGTGAAGGTGAGGA+AGG | 0.554813 | 8.3:+39903826 | MS.gene25274:CDS |
| GAAGTCGTCATGGGCAACAT+TGG | 0.556203 | 8.3:-39903785 | None:intergenic |
| AACGACTATACGGTGACCAT+GGG | 0.556588 | 8.3:+39903147 | MS.gene25274:CDS |
| TTTCTCTCAGAAGTCGTCAT+GGG | 0.563812 | 8.3:-39903794 | None:intergenic |
| GAAGCAGAAACAGGAGGAGT+GGG | 0.580158 | 8.3:+39903235 | MS.gene25274:CDS |
| GTTTCTCTCAGAAGTCGTCA+TGG | 0.580421 | 8.3:-39903795 | None:intergenic |
| AAACTATATTAAACTCTGCA+CGG | 0.581815 | 8.3:-39903265 | None:intergenic |
| TGAAGCAGAAACAGGAGGAG+TGG | 0.583162 | 8.3:+39903234 | MS.gene25274:CDS |
| GGCTGTCGACGGGACTGGAG+CGG | 0.601171 | 8.3:+39903968 | MS.gene25274:CDS |
| AAGGTGAGGAAGGCAGCCGA+GGG | 0.608404 | 8.3:+39903836 | MS.gene25274:CDS |
| TGCAACAAGTAAGAAAGTTG+AGG | 0.611189 | 8.3:+39902913 | MS.gene25274:CDS |
| TTACGATGAGTTACACCGGC+GGG | 0.613809 | 8.3:-39903875 | None:intergenic |
| ATCACTGGTAGCATATCCCT+CGG | 0.627935 | 8.3:-39903852 | None:intergenic |
| TGCTTTACGATGAGTTACAC+CGG | 0.645166 | 8.3:-39903879 | None:intergenic |
| CTTCCATCACATCAAGCCCA+TGG | 0.664006 | 8.3:-39903163 | None:intergenic |
| ACTTGGCTGAAGTGAAGGTG+AGG | 0.666702 | 8.3:+39903822 | MS.gene25274:CDS |
| GCGGGTTAATATCACCGGCA+AGG | 0.668769 | 8.3:-39903210 | None:intergenic |
| TATGCTACCAGTGATCCCGC+CGG | 0.678025 | 8.3:+39903860 | MS.gene25274:CDS |
| CCGCCTGAAGCAGAAACAGG+AGG | 0.700575 | 8.3:+39903229 | MS.gene25274:CDS |
| TTTACGATGAGTTACACCGG+CGG | 0.801865 | 8.3:-39903876 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTCTTAACTATATTAAA+AGG | - | chr8.3:39903507-39903526 | None:intergenic | 10.0% |
| !! | TTAAATAACTTACTATTTAA+AGG | - | chr8.3:39903454-39903473 | None:intergenic | 10.0% |
| !!! | GAAATATTTAAAATTAGTTT+AGG | + | chr8.3:39903521-39903540 | MS.gene25274:intron | 10.0% |
| !! | AATTTATCATAGCATATAAA+TGG | + | chr8.3:39903036-39903055 | MS.gene25274:intron | 15.0% |
| !!! | AATCAAATATTTTCTTTCAA+TGG | - | chr8.3:39903480-39903499 | None:intergenic | 15.0% |
| !! | TATTTAAAGGTTGTTAAAGA+GGG | - | chr8.3:39903441-39903460 | None:intergenic | 20.0% |
| !!! | CAATTCTTGATTCTTTTTAA+CGG | + | chr8.3:39903410-39903429 | MS.gene25274:intron | 20.0% |
| ! | AAACTATATTAAACTCTGCA+CGG | - | chr8.3:39903268-39903287 | None:intergenic | 25.0% |
| ! | AAAGACATTATTTCAAAGGA+TGG | + | chr8.3:39903908-39903927 | MS.gene25274:CDS | 25.0% |
| ! | AGAATCAAGAATTGTGTTAT+TGG | - | chr8.3:39903404-39903423 | None:intergenic | 25.0% |
| ! | ATAAACTCTTGAATAAGGAA+GGG | + | chr8.3:39903653-39903672 | MS.gene25274:intron | 25.0% |
| ! | ATTCAAGAGTTTATGGATAT+CGG | - | chr8.3:39903647-39903666 | None:intergenic | 25.0% |
| ! | CTATTTAAAGGTTGTTAAAG+AGG | - | chr8.3:39903442-39903461 | None:intergenic | 25.0% |
| ! | GAGAAAAGACATTATTTCAA+AGG | + | chr8.3:39903904-39903923 | MS.gene25274:CDS | 25.0% |
| ! | TATCCATAAACTCTTGAATA+AGG | + | chr8.3:39903648-39903667 | MS.gene25274:intron | 25.0% |
| ! | TGCAGAGTTTAATATAGTTT+GGG | + | chr8.3:39903268-39903287 | MS.gene25274:CDS | 25.0% |
| ! | TGTCAACAAATAATGAAAAG+AGG | - | chr8.3:39903746-39903765 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGCTCTAAATCTT+AGG | + | chr8.3:39903117-39903136 | MS.gene25274:intron | 25.0% |
| AGAACAGAACACAAAATATC+AGG | - | chr8.3:39903077-39903096 | None:intergenic | 30.0% | |
| AGATATTCCAATTCGTATTG+AGG | + | chr8.3:39902973-39902992 | MS.gene25274:CDS | 30.0% | |
| CATAAACTCTTGAATAAGGA+AGG | + | chr8.3:39903652-39903671 | MS.gene25274:intron | 30.0% | |
| CTTCCTTATTCAAGAGTTTA+TGG | - | chr8.3:39903654-39903673 | None:intergenic | 30.0% | |
| GTGCAGAGTTTAATATAGTT+TGG | + | chr8.3:39903267-39903286 | MS.gene25274:CDS | 30.0% | |
| TAAACTCTTGAATAAGGAAG+GGG | + | chr8.3:39903654-39903673 | MS.gene25274:intron | 30.0% | |
| ! | CTTGATTCTTTTTAACGGTA+TGG | + | chr8.3:39903415-39903434 | MS.gene25274:intron | 30.0% |
| ! | GTTAATGATGATGTAATTCC+AGG | + | chr8.3:39902950-39902969 | MS.gene25274:CDS | 30.0% |
| ! | TTCTGAGAGAAACAAATACT+TGG | + | chr8.3:39903805-39903824 | MS.gene25274:CDS | 30.0% |
| AAATGCTCCTCAATACGAAT+TGG | - | chr8.3:39902983-39903002 | None:intergenic | 35.0% | |
| ACAAAAAGCTTGAGCACTAA+AGG | + | chr8.3:39903359-39903378 | MS.gene25274:CDS | 35.0% | |
| ATACGAATTGGAATATCTCC+TGG | - | chr8.3:39902971-39902990 | None:intergenic | 35.0% | |
| CTGTTCTGATACTATCTTCT+TGG | + | chr8.3:39903090-39903109 | MS.gene25274:intron | 35.0% | |
| TGCAACAAGTAAGAAAGTTG+AGG | + | chr8.3:39902913-39902932 | MS.gene25274:CDS | 35.0% | |
| ! | AAGCTTTTACTTTAAGCAGC+AGG | + | chr8.3:39903334-39903353 | MS.gene25274:CDS | 35.0% |
| !! | TGTTACTGTTCAGGTTGATA+CGG | + | chr8.3:39903934-39903953 | MS.gene25274:CDS | 35.0% |
| AGCCCAAACCAATATTAGCA+GGG | + | chr8.3:39903589-39903608 | MS.gene25274:intron | 40.0% | |
| AGGTGCATTGAACGACTATA+CGG | + | chr8.3:39903137-39903156 | MS.gene25274:CDS | 40.0% | |
| CAAATACTTGGCTGAAGTGA+AGG | + | chr8.3:39903817-39903836 | MS.gene25274:CDS | 40.0% | |
| CTTGAATAAGGAAGGGGATA+CGG | + | chr8.3:39903660-39903679 | MS.gene25274:intron | 40.0% | |
| TGCTTTACGATGAGTTACAC+CGG | - | chr8.3:39903882-39903901 | None:intergenic | 40.0% | |
| TTTCTCTCAGAAGTCGTCAT+GGG | - | chr8.3:39903797-39903816 | None:intergenic | 40.0% | |
| !! | CGTATTGAGGAGCATTTATC+AGG | + | chr8.3:39902986-39903005 | MS.gene25274:CDS | 40.0% |
| AAACCAATATTAGCAGGGCG+TGG | + | chr8.3:39903594-39903613 | MS.gene25274:intron | 45.0% | |
| AACGACTATACGGTGACCAT+GGG | + | chr8.3:39903147-39903166 | MS.gene25274:CDS | 45.0% | |
| ATCACTGGTAGCATATCCCT+CGG | - | chr8.3:39903855-39903874 | None:intergenic | 45.0% | |
| CAGCCCAAACCAATATTAGC+AGG | + | chr8.3:39903588-39903607 | MS.gene25274:intron | 45.0% | |
| GTTTCTCTCAGAAGTCGTCA+TGG | - | chr8.3:39903798-39903817 | None:intergenic | 45.0% | |
| TTTACGATGAGTTACACCGG+CGG | - | chr8.3:39903879-39903898 | None:intergenic | 45.0% | |
| ! | ACGCCCTGCTAATATTGGTT+TGG | - | chr8.3:39903595-39903614 | None:intergenic | 45.0% |
| !! | CGCCCTGCTAATATTGGTTT+GGG | - | chr8.3:39903594-39903613 | None:intergenic | 45.0% |
| !! | TTCAGGCGGGTTAATATCAC+CGG | - | chr8.3:39903218-39903237 | None:intergenic | 45.0% |
| !!! | AAATATTTAAAATTAGTTTA+GGG | + | chr8.3:39903522-39903541 | MS.gene25274:intron | 5.0% |
| ACTTGGCTGAAGTGAAGGTG+AGG | + | chr8.3:39903822-39903841 | MS.gene25274:CDS | 50.0% | |
| CAATATTAGCAGGGCGTGGT+GGG | + | chr8.3:39903598-39903617 | MS.gene25274:intron | 50.0% | |
| CTTCCATCACATCAAGCCCA+TGG | - | chr8.3:39903166-39903185 | None:intergenic | 50.0% | |
| GAACGACTATACGGTGACCA+TGG | + | chr8.3:39903146-39903165 | MS.gene25274:CDS | 50.0% | |
| GAAGCAGAAACAGGAGGAGT+GGG | + | chr8.3:39903235-39903254 | MS.gene25274:CDS | 50.0% | |
| GAAGTCGTCATGGGCAACAT+TGG | - | chr8.3:39903788-39903807 | None:intergenic | 50.0% | |
| GAATAAGGAAGGGGATACGG+AGG | + | chr8.3:39903663-39903682 | MS.gene25274:intron | 50.0% | |
| TGAAGCAGAAACAGGAGGAG+TGG | + | chr8.3:39903234-39903253 | MS.gene25274:CDS | 50.0% | |
| TGACCATGGGCTTGATGTGA+TGG | + | chr8.3:39903160-39903179 | MS.gene25274:CDS | 50.0% | |
| TTACGATGAGTTACACCGGC+GGG | - | chr8.3:39903878-39903897 | None:intergenic | 50.0% | |
| !! | ACTCCTCCTGTTTCTGCTTC+AGG | - | chr8.3:39903235-39903254 | None:intergenic | 50.0% |
| !! | GAATGCATCTCTAGCCTTGC+CGG | + | chr8.3:39903196-39903215 | MS.gene25274:CDS | 50.0% |
| !! | GGATGGTGCTGTTACTGTTC+AGG | + | chr8.3:39903925-39903944 | MS.gene25274:CDS | 50.0% |
| AACCCGCCTGAAGCAGAAAC+AGG | + | chr8.3:39903226-39903245 | MS.gene25274:CDS | 55.0% | |
| CCAATATTAGCAGGGCGTGG+TGG | + | chr8.3:39903597-39903616 | MS.gene25274:intron | 55.0% | |
| CCACCACGCCCTGCTAATAT+TGG | - | chr8.3:39903600-39903619 | None:intergenic | 55.0% | |
| GGCTGAAGTGAAGGTGAGGA+AGG | + | chr8.3:39903826-39903845 | MS.gene25274:CDS | 55.0% | |
| GTTGATACGGAGCTTCGAGC+AGG | + | chr8.3:39903947-39903966 | MS.gene25274:CDS | 55.0% | |
| TATGCTACCAGTGATCCCGC+CGG | + | chr8.3:39903860-39903879 | MS.gene25274:CDS | 55.0% | |
| ! | GCGGGTTAATATCACCGGCA+AGG | - | chr8.3:39903213-39903232 | None:intergenic | 55.0% |
| !! | CCTCCTGTTTCTGCTTCAGG+CGG | - | chr8.3:39903232-39903251 | None:intergenic | 55.0% |
| !! | CTCCTGTTTCTGCTTCAGGC+GGG | - | chr8.3:39903231-39903250 | None:intergenic | 55.0% |
| AAGGTGAGGAAGGCAGCCGA+GGG | + | chr8.3:39903836-39903855 | MS.gene25274:CDS | 60.0% | |
| AGCTTCGAGCAGGCTGTCGA+CGG | + | chr8.3:39903957-39903976 | MS.gene25274:CDS | 60.0% | |
| AGTTACACCGGCGGGATCAC+TGG | - | chr8.3:39903870-39903889 | None:intergenic | 60.0% | |
| CCGCCTGAAGCAGAAACAGG+AGG | + | chr8.3:39903229-39903248 | MS.gene25274:CDS | 60.0% | |
| CGGGACTGGAGCGGAGATTG+TGG | + | chr8.3:39903977-39903996 | MS.gene25274:CDS | 65.0% | |
| GAAGGTGAGGAAGGCAGCCG+AGG | + | chr8.3:39903835-39903854 | MS.gene25274:CDS | 65.0% | |
| GCTTCGAGCAGGCTGTCGAC+GGG | + | chr8.3:39903958-39903977 | MS.gene25274:CDS | 65.0% | |
| GAGCAGGCTGTCGACGGGAC+TGG | + | chr8.3:39903963-39903982 | MS.gene25274:CDS | 70.0% | |
| GGCTGTCGACGGGACTGGAG+CGG | + | chr8.3:39903968-39903987 | MS.gene25274:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 39902893 | 39904009 | 39902893 | ID=MS.gene25274 |
| chr8.3 | mRNA | 39902893 | 39904009 | 39902893 | ID=MS.gene25274.t1;Parent=MS.gene25274 |
| chr8.3 | exon | 39902893 | 39903007 | 39902893 | ID=MS.gene25274.t1.exon1;Parent=MS.gene25274.t1 |
| chr8.3 | CDS | 39902893 | 39903007 | 39902893 | ID=cds.MS.gene25274.t1;Parent=MS.gene25274.t1 |
| chr8.3 | exon | 39903126 | 39903380 | 39903126 | ID=MS.gene25274.t1.exon2;Parent=MS.gene25274.t1 |
| chr8.3 | CDS | 39903126 | 39903380 | 39903126 | ID=cds.MS.gene25274.t1;Parent=MS.gene25274.t1 |
| chr8.3 | exon | 39903783 | 39904009 | 39903783 | ID=MS.gene25274.t1.exon3;Parent=MS.gene25274.t1 |
| chr8.3 | CDS | 39903783 | 39904009 | 39903783 | ID=cds.MS.gene25274.t1;Parent=MS.gene25274.t1 |
| Gene Sequence |
| Protein sequence |
