Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25915.t1 | XP_013461053.1 | 99 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 3.30E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25915.t1 | Q86HG0 | 46.5 | 413 | 206 | 3 | 10 | 415 | 8 | 412 | 4.4e-87 | 323.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25915.t1 | A0A072UZU5 | 99.0 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 2.4e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25915 | MS.gene62173 | PPI |
| MS.gene50130 | MS.gene25915 | PPI |
| MS.gene63503 | MS.gene25915 | PPI |
| MS.gene25915 | MS.gene29519 | PPI |
| MS.gene008143 | MS.gene25915 | PPI |
| MS.gene63291 | MS.gene25915 | PPI |
| MS.gene25915 | MS.gene32515 | PPI |
| MS.gene25915 | MS.gene29520 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25915.t1 | MTR_3g078570 | 99.036 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 0.0 | 848 |
| MS.gene25915.t1 | MTR_3g078570 | 98.645 | 369 | 5 | 0 | 1 | 369 | 1 | 369 | 0.0 | 758 |
| MS.gene25915.t1 | MTR_6g008840 | 82.039 | 412 | 74 | 0 | 4 | 415 | 3 | 414 | 0.0 | 719 |
| MS.gene25915.t1 | MTR_4g071670 | 72.881 | 236 | 46 | 1 | 180 | 415 | 3 | 220 | 1.18e-122 | 355 |
| MS.gene25915.t1 | MTR_3g069070 | 31.750 | 400 | 225 | 7 | 10 | 409 | 3 | 354 | 2.25e-61 | 202 |
| MS.gene25915.t1 | MTR_5g080770 | 31.500 | 400 | 226 | 7 | 10 | 409 | 3 | 354 | 2.76e-61 | 202 |
| MS.gene25915.t1 | MTR_3g069070 | 30.564 | 337 | 189 | 5 | 73 | 409 | 4 | 295 | 7.80e-48 | 166 |
| MS.gene25915.t1 | MTR_4g133690 | 29.969 | 327 | 167 | 5 | 80 | 406 | 30 | 294 | 1.35e-42 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25915.t1 | AT1G74910 | 80.779 | 411 | 78 | 1 | 5 | 415 | 6 | 415 | 0.0 | 711 |
| MS.gene25915.t1 | AT1G74910 | 80.779 | 411 | 78 | 1 | 5 | 415 | 6 | 415 | 0.0 | 711 |
| MS.gene25915.t1 | AT2G04650 | 75.604 | 414 | 92 | 2 | 3 | 415 | 1 | 406 | 0.0 | 662 |
| MS.gene25915.t1 | AT1G74910 | 80.822 | 365 | 69 | 1 | 5 | 369 | 6 | 369 | 0.0 | 640 |
| MS.gene25915.t1 | AT2G04650 | 75.315 | 397 | 89 | 2 | 20 | 415 | 6 | 394 | 0.0 | 632 |
| MS.gene25915.t1 | AT2G39770 | 30.227 | 397 | 229 | 7 | 10 | 406 | 3 | 351 | 2.10e-57 | 192 |
| MS.gene25915.t1 | AT2G39770 | 30.227 | 397 | 229 | 7 | 10 | 406 | 3 | 351 | 2.10e-57 | 192 |
| MS.gene25915.t1 | AT2G39770 | 30.227 | 397 | 229 | 7 | 10 | 406 | 3 | 351 | 2.10e-57 | 192 |
| MS.gene25915.t1 | AT4G30570 | 31.300 | 377 | 212 | 7 | 30 | 405 | 1 | 331 | 4.10e-56 | 188 |
| MS.gene25915.t1 | AT3G55590 | 31.250 | 400 | 222 | 9 | 10 | 405 | 3 | 353 | 5.77e-55 | 186 |
Find 117 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTCTCAGATTCCTAATT+TGG | 0.142450 | 3.2:+69334832 | MS.gene25915:intron |
| CCGGAGTCAGCCAGCGAATT+TGG | 0.144526 | 3.2:+69336048 | MS.gene25915:CDS |
| TCAACCTAACAGGGAGTTTA+AGG | 0.207561 | 3.2:-69334925 | None:intergenic |
| ATCTTGAACGCCGACATTTA+AGG | 0.216010 | 3.2:-69339545 | None:intergenic |
| CAGAAACATACAAAAGTTTC+AGG | 0.229413 | 3.2:-69336123 | None:intergenic |
| AGGTAAATCCGAGCCAAATT+AGG | 0.278075 | 3.2:-69334845 | None:intergenic |
| TTGGCTCGGATTTACCTTAT+TGG | 0.285002 | 3.2:+69334851 | MS.gene25915:CDS |
| TACCATCTCCATTTGCTAAT+AGG | 0.285546 | 3.2:-69337703 | None:intergenic |
| CGGAGTCAGCCAGCGAATTT+GGG | 0.286759 | 3.2:+69336049 | MS.gene25915:CDS |
| GGAGATTACAATGCAAAGTT+TGG | 0.293510 | 3.2:+69339088 | MS.gene25915:CDS |
| GGTCAGTATTTCAACCTAAC+AGG | 0.314409 | 3.2:-69334935 | None:intergenic |
| GCTAATGGAAAGAGTGGTTT+AGG | 0.338257 | 3.2:-69334688 | None:intergenic |
| TTAGGAATGTTGAATGATAA+TGG | 0.346235 | 3.2:-69334670 | None:intergenic |
| GATATCCTCTCACCTCTTGC+AGG | 0.350385 | 3.2:+69337483 | MS.gene25915:CDS |
| AGCCAGCGAATTTGGGGAAT+TGG | 0.355166 | 3.2:+69336056 | MS.gene25915:CDS |
| TATACACACCACAGTTTATA+AGG | 0.358814 | 3.2:-69336260 | None:intergenic |
| GAGATTACAATGCAAAGTTT+GGG | 0.364683 | 3.2:+69339089 | MS.gene25915:CDS |
| GTTGTTCTTCATGCAATTGT+TGG | 0.365369 | 3.2:+69338882 | MS.gene25915:CDS |
| TCAATGGCAGTAAAGATATC+TGG | 0.400157 | 3.2:-69336291 | None:intergenic |
| ACGACCTTAAACTCCCTGTT+AGG | 0.403314 | 3.2:+69334921 | MS.gene25915:CDS |
| AAACCACTCTTTCCATTAGC+TGG | 0.410401 | 3.2:+69334691 | MS.gene25915:CDS |
| AAGAAATTACCCAGCATTTG+TGG | 0.416326 | 3.2:-69335735 | None:intergenic |
| GGGAACAATACTGGTTGTTA+AGG | 0.416574 | 3.2:+69335932 | MS.gene25915:CDS |
| TGGACGGAATCGAGTGCCTT+TGG | 0.418152 | 3.2:-69334650 | None:intergenic |
| TGGGAACAAATCAAAACTCC+TGG | 0.423593 | 3.2:+69337543 | MS.gene25915:CDS |
| TGGACGATGGGCACGTGTCC+AGG | 0.425264 | 3.2:+69338920 | MS.gene25915:CDS |
| GTTCTTCATAGAAACCAATA+AGG | 0.428291 | 3.2:-69334865 | None:intergenic |
| ACCATGGGTTGTCCAGCTAA+TGG | 0.441231 | 3.2:-69334703 | None:intergenic |
| ATTAAGAAAGCATGCATCAT+TGG | 0.441599 | 3.2:+69337725 | MS.gene25915:CDS |
| ATATCTGCAAATGCTCGTAT+AGG | 0.449953 | 3.2:+69338722 | MS.gene25915:CDS |
| CCTTGATTTCAACATCATCA+AGG | 0.452782 | 3.2:-69338775 | None:intergenic |
| GAGTTTAAGGTCGTTGGAGA+TGG | 0.461406 | 3.2:-69334912 | None:intergenic |
| TGGTGGCATGGGAACAATAC+TGG | 0.463716 | 3.2:+69335923 | MS.gene25915:CDS |
| CCTTGATGATGTTGAAATCA+AGG | 0.464913 | 3.2:+69338775 | MS.gene25915:CDS |
| GAGAGTTGTGGCGGTTATCA+TGG | 0.469516 | 3.2:+69334615 | MS.gene25915:CDS |
| GCGAAATTGCGAAAGATACA+AGG | 0.470146 | 3.2:-69337666 | None:intergenic |
| CAGAATGTCCATAAAATGTT+CGG | 0.473623 | 3.2:+69337643 | MS.gene25915:intron |
| CTCAGATTCCTAATTTGGCT+CGG | 0.478871 | 3.2:+69334837 | MS.gene25915:intron |
| AACAGGGAGTTTAAGGTCGT+TGG | 0.480946 | 3.2:-69334918 | None:intergenic |
| CTGCTGCATTGCTTCAAAGC+TGG | 0.482375 | 3.2:-69336538 | None:intergenic |
| AAGTTTGGGGTCACTATACT+TGG | 0.483146 | 3.2:+69339103 | MS.gene25915:CDS |
| AGATATCTTTACTGCCATTG+AGG | 0.489647 | 3.2:+69336293 | MS.gene25915:CDS |
| TGTCATCATGGAGGAGGATC+CGG | 0.492171 | 3.2:+69335569 | MS.gene25915:CDS |
| GATATCTTTACTGCCATTGA+GGG | 0.493889 | 3.2:+69336294 | MS.gene25915:CDS |
| CGGAATCGAGTGCCTTTGGT+GGG | 0.495390 | 3.2:-69334646 | None:intergenic |
| ATGATATATCAGATACTTGA+AGG | 0.496190 | 3.2:+69335500 | MS.gene25915:intron |
| CCAAATTCGCTGGCTGACTC+CGG | 0.503001 | 3.2:-69336048 | None:intergenic |
| TCCCCTCACCTATTAGCAAA+TGG | 0.503778 | 3.2:+69337695 | MS.gene25915:CDS |
| CTGAGAAGAAACACCCTCAA+TGG | 0.504733 | 3.2:-69336307 | None:intergenic |
| GTTGTGGCGGTTATCATGGT+TGG | 0.505551 | 3.2:+69334619 | MS.gene25915:CDS |
| TCCATTAGCTGGACAACCCA+TGG | 0.516294 | 3.2:+69334702 | MS.gene25915:CDS |
| CATTTAAGGTCTTGTGTGGA+AGG | 0.516494 | 3.2:-69339531 | None:intergenic |
| ATCTGTTGCCGTTGAGGATG+AGG | 0.520316 | 3.2:+69339486 | MS.gene25915:CDS |
| GACAAGCCTCATGGTTCTGC+CGG | 0.520726 | 3.2:+69335525 | MS.gene25915:CDS |
| ACGGAATCGAGTGCCTTTGG+TGG | 0.521109 | 3.2:-69334647 | None:intergenic |
| TTCTTCATGCAATTGTTGGA+TGG | 0.524578 | 3.2:+69338886 | MS.gene25915:CDS |
| AACTGTTTCTTCCCTGCAAG+AGG | 0.524841 | 3.2:-69337495 | None:intergenic |
| GAAATCCTCCATTGGACGAT+GGG | 0.528328 | 3.2:+69338908 | MS.gene25915:CDS |
| TAACTTCAAAGATGTCATCA+TGG | 0.529752 | 3.2:+69335557 | MS.gene25915:CDS |
| TTACCCAGCATTTGTGGCAG+AGG | 0.533855 | 3.2:-69335729 | None:intergenic |
| CAGCTTTGAAGCAATGCAGC+AGG | 0.535500 | 3.2:+69336539 | MS.gene25915:CDS |
| TTTCCTCTGCCACAAATGCT+GGG | 0.535993 | 3.2:+69335726 | MS.gene25915:CDS |
| GTGGCGGTTATCATGGTTGG+AGG | 0.543279 | 3.2:+69334622 | MS.gene25915:CDS |
| TACCAATTCCCCAAATTCGC+TGG | 0.543401 | 3.2:-69336058 | None:intergenic |
| TATAAACTAATTCAGGGTCG+TGG | 0.543960 | 3.2:+69339067 | MS.gene25915:intron |
| CTCCATTTGCTAATAGGTGA+GGG | 0.546056 | 3.2:-69337697 | None:intergenic |
| GCAAATGCTCGTATAGGAGC+TGG | 0.550558 | 3.2:+69338728 | MS.gene25915:CDS |
| AAGCCTCATGGTTCTGCCGG+TGG | 0.551198 | 3.2:+69335528 | MS.gene25915:CDS |
| CTCGTATAGGAGCTGGTGCA+AGG | 0.551410 | 3.2:+69338735 | MS.gene25915:CDS |
| TGCAAGAGTTCATTGCTGAC+AGG | 0.554241 | 3.2:-69336087 | None:intergenic |
| TGCCGTTGAGGATGAGGTAG+TGG | 0.555931 | 3.2:+69339492 | MS.gene25915:CDS |
| GACGGATGCACCTTTGCTGA+TGG | 0.556393 | 3.2:-69337764 | None:intergenic |
| GTTGGATGGAAATCCTCCAT+TGG | 0.560456 | 3.2:+69338900 | MS.gene25915:CDS |
| TTTGCAGATATTGATACGCC+AGG | 0.561974 | 3.2:-69338710 | None:intergenic |
| ACCGGCGAATTATGTCAGAT+TGG | 0.563640 | 3.2:+69337455 | MS.gene25915:CDS |
| GACACGTGCCCATCGTCCAA+TGG | 0.566978 | 3.2:-69338916 | None:intergenic |
| GTGGTTGAACAGATTGGTCC+TGG | 0.568136 | 3.2:+69338692 | MS.gene25915:intron |
| CAAAGATGTCATCATGGAGG+AGG | 0.569219 | 3.2:+69335563 | MS.gene25915:CDS |
| GGGAACAAATCAAAACTCCT+GGG | 0.579375 | 3.2:+69337544 | MS.gene25915:CDS |
| GTTCTTCTGTAGGAGTCTAC+CGG | 0.579815 | 3.2:+69337437 | MS.gene25915:intron |
| AAGCAATGCAGCAGGACACA+AGG | 0.584010 | 3.2:+69336547 | MS.gene25915:CDS |
| ATGGTTGGAGGCCCCACCAA+AGG | 0.585366 | 3.2:+69334634 | MS.gene25915:CDS |
| GAATGTTGAATGATAATGGA+CGG | 0.587591 | 3.2:-69334666 | None:intergenic |
| AGGTGAATCTGTTGCCGTTG+AGG | 0.589560 | 3.2:+69339480 | MS.gene25915:intron |
| CACCTATTAGCAAATGGAGA+TGG | 0.589767 | 3.2:+69337701 | MS.gene25915:CDS |
| TTTGAAGTTATAAAGACCAC+CGG | 0.589860 | 3.2:-69335544 | None:intergenic |
| TCTCCATTTGCTAATAGGTG+AGG | 0.592639 | 3.2:-69337698 | None:intergenic |
| GGAAATCCTCCATTGGACGA+TGG | 0.596829 | 3.2:+69338907 | MS.gene25915:CDS |
| CCGACATTTAAGGTCTTGTG+TGG | 0.598385 | 3.2:-69339535 | None:intergenic |
| GGAATCGAGTGCCTTTGGTG+GGG | 0.604355 | 3.2:-69334645 | None:intergenic |
| AAAGGTGCATCCGTCTGCAA+AGG | 0.606718 | 3.2:+69337772 | MS.gene25915:CDS |
| TGTCCAGCTAATGGAAAGAG+TGG | 0.609015 | 3.2:-69334694 | None:intergenic |
| ATATCCTCTCACCTCTTGCA+GGG | 0.611025 | 3.2:+69337484 | MS.gene25915:CDS |
| TTGAAGGAGGACAAGCCTCA+TGG | 0.616152 | 3.2:+69335516 | MS.gene25915:CDS |
| TCCAATCTGACATAATTCGC+CGG | 0.617056 | 3.2:-69337456 | None:intergenic |
| TCTTCCCTGCAAGAGGTGAG+AGG | 0.617718 | 3.2:-69337488 | None:intergenic |
| TGAATATTAACCTTTGCAGA+CGG | 0.619087 | 3.2:-69337782 | None:intergenic |
| AACCACTACCTCATCCTCAA+CGG | 0.619133 | 3.2:-69339494 | None:intergenic |
| GTTGTATATATATGAAACCA+TGG | 0.622029 | 3.2:+69337515 | MS.gene25915:CDS |
| AGAGATTGGATGATGAACCA+TGG | 0.625691 | 3.2:-69334719 | None:intergenic |
| TGCAGAAGAGAGAGTTGTGG+CGG | 0.627371 | 3.2:+69334606 | MS.gene25915:CDS |
| TTATATTCATCCATCAGCAA+AGG | 0.630315 | 3.2:+69337754 | MS.gene25915:CDS |
| GAGATTGGATGATGAACCAT+GGG | 0.630585 | 3.2:-69334718 | None:intergenic |
| TTGAGGGTGTTTCTTCTCAG+CGG | 0.638549 | 3.2:+69336310 | MS.gene25915:CDS |
| CCACACAAGACCTTAAATGT+CGG | 0.639985 | 3.2:+69339535 | MS.gene25915:CDS |
| AGATTACAATGCAAAGTTTG+GGG | 0.643007 | 3.2:+69339090 | MS.gene25915:CDS |
| TCTTCTCAGCGGAAAGACAG+AGG | 0.647631 | 3.2:+69336321 | MS.gene25915:CDS |
| ACGTGCCCATCGTCCAATGG+AGG | 0.649101 | 3.2:-69338913 | None:intergenic |
| TCCATTTGCTAATAGGTGAG+GGG | 0.656945 | 3.2:-69337696 | None:intergenic |
| GGAGTCAGCCAGCGAATTTG+GGG | 0.671049 | 3.2:+69336050 | MS.gene25915:CDS |
| GTCAGTATTTCAACCTAACA+GGG | 0.681516 | 3.2:-69334934 | None:intergenic |
| CTAATAGGTGAGGGGATGTG+TGG | 0.681648 | 3.2:-69337688 | None:intergenic |
| GTTAGTGACCTTATAAACTG+TGG | 0.686135 | 3.2:+69336252 | MS.gene25915:CDS |
| ATATATCAGATACTTGAAGG+AGG | 0.711744 | 3.2:+69335503 | MS.gene25915:intron |
| CTTCAAAGATGTCATCATGG+AGG | 0.716377 | 3.2:+69335560 | MS.gene25915:CDS |
| AATTGCAGAAGAGAGAGTTG+TGG | 0.716827 | 3.2:+69334603 | MS.gene25915:CDS |
| AGACCACCGGCAGAACCATG+AGG | 0.719747 | 3.2:-69335531 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAGATATAAAATAATTA+TGG | - | chr3.2:69339280-69339299 | None:intergenic | 10.0% |
| !! | ACAAGATATAAAATAATTAT+GGG | - | chr3.2:69339279-69339298 | None:intergenic | 10.0% |
| !! | TAAAATGATTATATAATAAC+CGG | - | chr3.2:69335591-69335610 | None:intergenic | 10.0% |
| !!! | ATGTAATTTTATAATTTAAG+TGG | - | chr3.2:69338141-69338160 | None:intergenic | 10.0% |
| !!! | ATTAACTAAGAATAATTTTT+GGG | + | chr3.2:69336481-69336500 | MS.gene25915:intron | 10.0% |
| !!! | TATTAACTAAGAATAATTTT+TGG | + | chr3.2:69336480-69336499 | MS.gene25915:intron | 10.0% |
| !!! | TATTTGGAATAAAATATTTA+GGG | + | chr3.2:69337058-69337077 | MS.gene25915:intron | 10.0% |
| !!! | TGTAATTTTATAATTTAAGT+GGG | - | chr3.2:69338140-69338159 | None:intergenic | 10.0% |
| !! | GTTAAGATGTTATTATATTT+AGG | - | chr3.2:69339186-69339205 | None:intergenic | 15.0% |
| !!! | AAATGTGTTTTTATTTTACT+CGG | + | chr3.2:69338491-69338510 | MS.gene25915:intron | 15.0% |
| !!! | ATTCAGTATTGAAATAATTA+AGG | - | chr3.2:69339254-69339273 | None:intergenic | 15.0% |
| !!! | GTAATTTTATAATTTAAGTG+GGG | - | chr3.2:69338139-69338158 | None:intergenic | 15.0% |
| !!! | GTATTTGGAATAAAATATTT+AGG | + | chr3.2:69337057-69337076 | MS.gene25915:intron | 15.0% |
| !!! | TAATTTTATAATTTAAGTGG+GGG | - | chr3.2:69338138-69338157 | None:intergenic | 15.0% |
| !!! | TCATATTTTGTATAATTGTA+TGG | + | chr3.2:69335661-69335680 | MS.gene25915:intron | 15.0% |
| !!! | TTATTTTCTACATTTACTTT+TGG | + | chr3.2:69336802-69336821 | MS.gene25915:intron | 15.0% |
| !!! | TTTTAAATATTTCATCTTAC+AGG | + | chr3.2:69338851-69338870 | MS.gene25915:intron | 15.0% |
| !! | AATAAAAGGAATGTAAAGAT+AGG | - | chr3.2:69339026-69339045 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | - | chr3.2:69338405-69338424 | None:intergenic | 20.0% |
| !! | AATAAAATTTCAGAAAGTTC+TGG | - | chr3.2:69336622-69336641 | None:intergenic | 20.0% |
| !! | AGATGTTATTATATTTAGGA+CGG | - | chr3.2:69339182-69339201 | None:intergenic | 20.0% |
| !! | ATTCTTAGTTAATATACATG+AGG | - | chr3.2:69336474-69336493 | None:intergenic | 20.0% |
| !! | CATTAATTTATGAATGTTAG+TGG | - | chr3.2:69338981-69339000 | None:intergenic | 20.0% |
| !! | GAAAATAAGGATAGTTTATA+TGG | + | chr3.2:69337390-69337409 | MS.gene25915:intron | 20.0% |
| !! | GAAATGTATAAACTAATTCA+GGG | + | chr3.2:69339061-69339080 | MS.gene25915:intron | 20.0% |
| !! | TAAGTGATTATACAAATTGA+TGG | - | chr3.2:69338251-69338270 | None:intergenic | 20.0% |
| !! | TATATGATTGTCAACAATAT+TGG | + | chr3.2:69336862-69336881 | MS.gene25915:intron | 20.0% |
| !! | TGAAATGTATAAACTAATTC+AGG | + | chr3.2:69339060-69339079 | MS.gene25915:intron | 20.0% |
| !! | TGAGTTTATATATTTAGAGA+CGG | + | chr3.2:69339381-69339400 | MS.gene25915:intron | 20.0% |
| !! | TGTTATGAGTAAGAAATATT+AGG | - | chr3.2:69337887-69337906 | None:intergenic | 20.0% |
| !!! | AAAAATAAAGCATTTAAGCA+TGG | + | chr3.2:69336916-69336935 | MS.gene25915:intron | 20.0% |
| !!! | AATGTGTTTTTATTTTACTC+GGG | + | chr3.2:69338492-69338511 | MS.gene25915:intron | 20.0% |
| !!! | ATTTTATATGCTATTAGTAC+TGG | + | chr3.2:69335621-69335640 | MS.gene25915:intron | 20.0% |
| !!! | CATTTAGATTTTCTTTTTCT+CGG | - | chr3.2:69338638-69338657 | None:intergenic | 20.0% |
| !!! | TTCGGTTCTATTTTTAAAAT+AGG | - | chr3.2:69338518-69338537 | None:intergenic | 20.0% |
| !!! | TTGAAATGCATAAACATTTT+TGG | + | chr3.2:69338820-69338839 | MS.gene25915:intron | 20.0% |
| ! | AAGAAGAGTAGAAAAATAGT+AGG | - | chr3.2:69335428-69335447 | None:intergenic | 25.0% |
| ! | ACTTAATCAGTCAATTTGAA+AGG | + | chr3.2:69338266-69338285 | MS.gene25915:intron | 25.0% |
| ! | AGCCAATAAGAAAATAAGAT+CGG | + | chr3.2:69336978-69336997 | MS.gene25915:intron | 25.0% |
| ! | ATGATATATCAGATACTTGA+AGG | + | chr3.2:69335500-69335519 | MS.gene25915:intron | 25.0% |
| ! | CTCACTCAAAAAGATAATAT+AGG | - | chr3.2:69338611-69338630 | None:intergenic | 25.0% |
| ! | GTCACTATTAAAAAACAATG+TGG | - | chr3.2:69335970-69335989 | None:intergenic | 25.0% |
| ! | GTTGTATATATATGAAACCA+TGG | + | chr3.2:69337515-69337534 | MS.gene25915:CDS | 25.0% |
| ! | TAATTTCTGCTGGATATATA+AGG | + | chr3.2:69336425-69336444 | MS.gene25915:intron | 25.0% |
| ! | TATAAGGAATTGTAGATAAC+TGG | + | chr3.2:69336441-69336460 | MS.gene25915:intron | 25.0% |
| ! | TATGAAGATAACAGTAAGAA+AGG | - | chr3.2:69339131-69339150 | None:intergenic | 25.0% |
| ! | TCATAACAACTTAATGTTAC+TGG | + | chr3.2:69337899-69337918 | MS.gene25915:intron | 25.0% |
| ! | TTAAATAAGTCAATCCAAAC+AGG | - | chr3.2:69334959-69334978 | None:intergenic | 25.0% |
| ! | TTAATTGATGCATATCATCA+GGG | + | chr3.2:69338033-69338052 | MS.gene25915:intron | 25.0% |
| ! | TTAGGAATGTTGAATGATAA+TGG | - | chr3.2:69334673-69334692 | None:intergenic | 25.0% |
| ! | TTCAAGTATCTGATATATCA+TGG | - | chr3.2:69335501-69335520 | None:intergenic | 25.0% |
| ! | TTCCTTAATAGTGCTTATAT+GGG | - | chr3.2:69337161-69337180 | None:intergenic | 25.0% |
| ! | TTTAATTGATGCATATCATC+AGG | + | chr3.2:69338032-69338051 | MS.gene25915:intron | 25.0% |
| !! | AAATTAGTCGTCTTTTCTAT+AGG | + | chr3.2:69339207-69339226 | MS.gene25915:intron | 25.0% |
| !! | ATATGAAACCATGGATTTTT+GGG | + | chr3.2:69337524-69337543 | MS.gene25915:CDS | 25.0% |
| !! | ATGTTCAATTTAATTTCTGC+TGG | + | chr3.2:69336415-69336434 | MS.gene25915:intron | 25.0% |
| !! | GAGGTAATATTGTTATTATG+GGG | + | chr3.2:69339403-69339422 | MS.gene25915:intron | 25.0% |
| !! | GGAGGTAATATTGTTATTAT+GGG | + | chr3.2:69339402-69339421 | MS.gene25915:intron | 25.0% |
| !! | TAATATTGTTATTATGGGGA+AGG | + | chr3.2:69339407-69339426 | MS.gene25915:intron | 25.0% |
| !! | TATATGAAACCATGGATTTT+TGG | + | chr3.2:69337523-69337542 | MS.gene25915:CDS | 25.0% |
| !! | TCTATCAACTTTTCTATAAC+AGG | - | chr3.2:69337101-69337120 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTATGAGACTGTT+TGG | + | chr3.2:69335247-69335266 | MS.gene25915:intron | 25.0% |
| !!! | CGGGTATTATAATTTTTTTG+AGG | - | chr3.2:69338115-69338134 | None:intergenic | 25.0% |
| !!! | GGCTTTTAACTAATCATTTT+GGG | - | chr3.2:69336962-69336981 | None:intergenic | 25.0% |
| !!! | TAAGTTTTATGAGACTGTTT+GGG | + | chr3.2:69335248-69335267 | MS.gene25915:intron | 25.0% |
| !!! | TCAGCTAAATTTTGAAAAAC+AGG | - | chr3.2:69336599-69336618 | None:intergenic | 25.0% |
| !!! | TGGCTTTTAACTAATCATTT+TGG | - | chr3.2:69336963-69336982 | None:intergenic | 25.0% |
| AAAGATAATATAGGTCCTCA+CGG | - | chr3.2:69338602-69338621 | None:intergenic | 30.0% | |
| AACCCATATAAGCACTATTA+AGG | + | chr3.2:69337156-69337175 | MS.gene25915:intron | 30.0% | |
| ACACAAGAATAGATGGTATT+TGG | + | chr3.2:69337042-69337061 | MS.gene25915:intron | 30.0% | |
| ACAGATGCTCACAAAAAATA+TGG | + | chr3.2:69335903-69335922 | MS.gene25915:intron | 30.0% | |
| ACTATTAAGGAAGGATAGAA+TGG | + | chr3.2:69337169-69337188 | MS.gene25915:intron | 30.0% | |
| AGATTACAATGCAAAGTTTG+GGG | + | chr3.2:69339090-69339109 | MS.gene25915:CDS | 30.0% | |
| ATATATCAGATACTTGAAGG+AGG | + | chr3.2:69335503-69335522 | MS.gene25915:intron | 30.0% | |
| ATTCAAGACATAACATAAGC+AGG | - | chr3.2:69336151-69336170 | None:intergenic | 30.0% | |
| CAGAAACATACAAAAGTTTC+AGG | - | chr3.2:69336126-69336145 | None:intergenic | 30.0% | |
| CAGAATGTCCATAAAATGTT+CGG | + | chr3.2:69337643-69337662 | MS.gene25915:intron | 30.0% | |
| CATATAAGCACTATTAAGGA+AGG | + | chr3.2:69337160-69337179 | MS.gene25915:intron | 30.0% | |
| CTTCCTTAATAGTGCTTATA+TGG | - | chr3.2:69337162-69337181 | None:intergenic | 30.0% | |
| GAGAAAAGGATCAAACAAAT+TGG | - | chr3.2:69336010-69336029 | None:intergenic | 30.0% | |
| GAGATTACAATGCAAAGTTT+GGG | + | chr3.2:69339089-69339108 | MS.gene25915:CDS | 30.0% | |
| GCAAACAAATTGCGAATAAA+AGG | - | chr3.2:69339040-69339059 | None:intergenic | 30.0% | |
| GGTTGTTAAGGTTAGAAATT+GGG | + | chr3.2:69335944-69335963 | MS.gene25915:intron | 30.0% | |
| GTGATTATACAAATTGATGG+TGG | - | chr3.2:69338248-69338267 | None:intergenic | 30.0% | |
| GTTCTTCATAGAAACCAATA+AGG | - | chr3.2:69334868-69334887 | None:intergenic | 30.0% | |
| GTTTACATAAGTGTTTGTCA+TGG | + | chr3.2:69335150-69335169 | MS.gene25915:intron | 30.0% | |
| GTTTATATATTTAGAGACGG+AGG | + | chr3.2:69339384-69339403 | MS.gene25915:intron | 30.0% | |
| TAACTTCAAAGATGTCATCA+TGG | + | chr3.2:69335557-69335576 | MS.gene25915:CDS | 30.0% | |
| TATACACACCACAGTTTATA+AGG | - | chr3.2:69336263-69336282 | None:intergenic | 30.0% | |
| TATGTAATTGGAAAAGACTC+TGG | + | chr3.2:69337335-69337354 | MS.gene25915:intron | 30.0% | |
| TGAATATTAACCTTTGCAGA+CGG | - | chr3.2:69337785-69337804 | None:intergenic | 30.0% | |
| TGGTTGTTAAGGTTAGAAAT+TGG | + | chr3.2:69335943-69335962 | MS.gene25915:intron | 30.0% | |
| TTAAAATTACCAAACTTGCC+TGG | - | chr3.2:69338941-69338960 | None:intergenic | 30.0% | |
| TTATATTCATCCATCAGCAA+AGG | + | chr3.2:69337754-69337773 | MS.gene25915:CDS | 30.0% | |
| TTTGTCTCAGATTCCTAATT+TGG | + | chr3.2:69334832-69334851 | MS.gene25915:intron | 30.0% | |
| ! | ACTTAGAATTGATTCATAGC+AGG | + | chr3.2:69337254-69337273 | MS.gene25915:intron | 30.0% |
| ! | ATTAAGAAAGCATGCATCAT+TGG | + | chr3.2:69337725-69337744 | MS.gene25915:CDS | 30.0% |
| ! | CGGAGGTAATATTGTTATTA+TGG | + | chr3.2:69339401-69339420 | MS.gene25915:intron | 30.0% |
| ! | TGCTGTTTGATCTATGTAAT+TGG | + | chr3.2:69337323-69337342 | MS.gene25915:intron | 30.0% |
| ! | TGTTATTATATTTAGGACGG+AGG | - | chr3.2:69339179-69339198 | None:intergenic | 30.0% |
| ! | TTTGAAGTTATAAAGACCAC+CGG | - | chr3.2:69335547-69335566 | None:intergenic | 30.0% |
| ! | TTTTATAATTTAAGTGGGGG+CGG | - | chr3.2:69338135-69338154 | None:intergenic | 30.0% |
| !! | GAATGTTGAATGATAATGGA+CGG | - | chr3.2:69334669-69334688 | None:intergenic | 30.0% |
| !! | TATTAGTACTGGTATGTTGA+TGG | + | chr3.2:69335632-69335651 | MS.gene25915:intron | 30.0% |
| !! | TCAAATAAGTTGATCCAAAC+CGG | - | chr3.2:69335221-69335240 | None:intergenic | 30.0% |
| !!! | CACCGATCTTATTTTCTTAT+TGG | - | chr3.2:69336983-69337002 | None:intergenic | 30.0% |
| AAAATAAGTGCGTGCATACA+TGG | - | chr3.2:69336789-69336808 | None:intergenic | 35.0% | |
| AACCTCCTATTTCATAGGAA+CGG | + | chr3.2:69338536-69338555 | MS.gene25915:intron | 35.0% | |
| AAGAAATTACCCAGCATTTG+TGG | - | chr3.2:69335738-69335757 | None:intergenic | 35.0% | |
| AAGATAATATAGGTCCTCAC+GGG | - | chr3.2:69338601-69338620 | None:intergenic | 35.0% | |
| AATACGACAATCACACATGA+AGG | - | chr3.2:69337607-69337626 | None:intergenic | 35.0% | |
| ACATAAGTTTGTGAGACTCT+CGG | + | chr3.2:69334991-69335010 | MS.gene25915:intron | 35.0% | |
| ACCTTCAAAAAGAGGAGAAA+AGG | - | chr3.2:69336024-69336043 | None:intergenic | 35.0% | |
| AGAGTAGAAAAATAGTAGGC+CGG | - | chr3.2:69335424-69335443 | None:intergenic | 35.0% | |
| AGATATCTTTACTGCCATTG+AGG | + | chr3.2:69336293-69336312 | MS.gene25915:CDS | 35.0% | |
| AGATGATGAGAATGCTATGA+TGG | + | chr3.2:69337009-69337028 | MS.gene25915:intron | 35.0% | |
| AGGCAAGTCTACACATTAAT+TGG | + | chr3.2:69338795-69338814 | MS.gene25915:intron | 35.0% | |
| AGGCATATCAAGACTGAAAT+AGG | - | chr3.2:69337867-69337886 | None:intergenic | 35.0% | |
| ATATCTGCAAATGCTCGTAT+AGG | + | chr3.2:69338722-69338741 | MS.gene25915:CDS | 35.0% | |
| ATTTAAACTCCCTGTTAGGT+TGG | + | chr3.2:69335187-69335206 | MS.gene25915:intron | 35.0% | |
| CACAAAAAATATGGTGGCAT+GGG | + | chr3.2:69335912-69335931 | MS.gene25915:CDS | 35.0% | |
| CAGATATGAACAATCGAGAT+CGG | - | chr3.2:69336753-69336772 | None:intergenic | 35.0% | |
| CCTTGATTTCAACATCATCA+AGG | - | chr3.2:69338778-69338797 | None:intergenic | 35.0% | |
| CGCTATACAGTGTGAAAATA+AGG | + | chr3.2:69337377-69337396 | MS.gene25915:intron | 35.0% | |
| GAAGATAATACATCAGTGAG+AGG | + | chr3.2:69337203-69337222 | MS.gene25915:intron | 35.0% | |
| GAGAGGTGAAATTTACCTAA+CGG | - | chr3.2:69338388-69338407 | None:intergenic | 35.0% | |
| GATAATATTCAAGCTTACCC+AGG | - | chr3.2:69337564-69337583 | None:intergenic | 35.0% | |
| GATAGAATCTTGCCTTAAGT+GGG | + | chr3.2:69337115-69337134 | MS.gene25915:intron | 35.0% | |
| GATATCTTTACTGCCATTGA+GGG | + | chr3.2:69336294-69336313 | MS.gene25915:CDS | 35.0% | |
| GATGCTCACAAAAAATATGG+TGG | + | chr3.2:69335906-69335925 | MS.gene25915:intron | 35.0% | |
| GGAGATTACAATGCAAAGTT+TGG | + | chr3.2:69339088-69339107 | MS.gene25915:CDS | 35.0% | |
| GGATAGAATGGTAGATAGAA+TGG | + | chr3.2:69337181-69337200 | MS.gene25915:intron | 35.0% | |
| GGCATATCAAGACTGAAATA+GGG | - | chr3.2:69337866-69337885 | None:intergenic | 35.0% | |
| GTCAGTATTTCAACCTAACA+GGG | - | chr3.2:69334937-69334956 | None:intergenic | 35.0% | |
| GTTAGTGACCTTATAAACTG+TGG | + | chr3.2:69336252-69336271 | MS.gene25915:CDS | 35.0% | |
| GTTGTTCTTCATGCAATTGT+TGG | + | chr3.2:69338882-69338901 | MS.gene25915:CDS | 35.0% | |
| TAAGCGTTTATCGATGTTTG+TGG | + | chr3.2:69335366-69335385 | MS.gene25915:intron | 35.0% | |
| TATAAACTAATTCAGGGTCG+TGG | + | chr3.2:69339067-69339086 | MS.gene25915:intron | 35.0% | |
| TCAATGGCAGTAAAGATATC+TGG | - | chr3.2:69336294-69336313 | None:intergenic | 35.0% | |
| TCACAAAAAATATGGTGGCA+TGG | + | chr3.2:69335911-69335930 | MS.gene25915:CDS | 35.0% | |
| TGAGATTTAAACTCCCTGTT+AGG | + | chr3.2:69335183-69335202 | MS.gene25915:intron | 35.0% | |
| TGATAGAATCTTGCCTTAAG+TGG | + | chr3.2:69337114-69337133 | MS.gene25915:intron | 35.0% | |
| TGTTGTCACACAAGAATAGA+TGG | + | chr3.2:69337035-69337054 | MS.gene25915:intron | 35.0% | |
| TTCCTATGAAATAGGAGGTT+CGG | - | chr3.2:69338536-69338555 | None:intergenic | 35.0% | |
| TTCTTCATGCAATTGTTGGA+TGG | + | chr3.2:69338886-69338905 | MS.gene25915:CDS | 35.0% | |
| TTTATAATTTAAGTGGGGGC+GGG | - | chr3.2:69338134-69338153 | None:intergenic | 35.0% | |
| ! | AATGTTACTGGTTGTACTTC+TGG | + | chr3.2:69337911-69337930 | MS.gene25915:intron | 35.0% |
| ! | ATACAAGGCCGAACATTTTA+TGG | - | chr3.2:69337654-69337673 | None:intergenic | 35.0% |
| ! | ATATGTTGTTTATCCGAACC+CGG | + | chr3.2:69335402-69335421 | MS.gene25915:intron | 35.0% |
| ! | ATTATATTTAGGACGGAGGT+AGG | - | chr3.2:69339175-69339194 | None:intergenic | 35.0% |
| ! | ATTCTGAAGAGTTCTTCTGT+AGG | + | chr3.2:69337427-69337446 | MS.gene25915:intron | 35.0% |
| ! | CAACTTGACTTTTGCTAATG+TGG | + | chr3.2:69338673-69338692 | MS.gene25915:intron | 35.0% |
| ! | GATTTGTTCCCAAAAATCCA+TGG | - | chr3.2:69337535-69337554 | None:intergenic | 35.0% |
| ! | TACCATCTCCATTTGCTAAT+AGG | - | chr3.2:69337706-69337725 | None:intergenic | 35.0% |
| ! | TCCTTTTCTCCTCTTTTTGA+AGG | + | chr3.2:69336020-69336039 | MS.gene25915:intron | 35.0% |
| !! | ATTTACCTAACGGTGTCATT+TGG | - | chr3.2:69338378-69338397 | None:intergenic | 35.0% |
| !! | CCTTGATGATGTTGAAATCA+AGG | + | chr3.2:69338775-69338794 | MS.gene25915:CDS | 35.0% |
| !! | TAGACTCTAGTTCTACTTTC+TGG | + | chr3.2:69338200-69338219 | MS.gene25915:intron | 35.0% |
| AAACCACTCTTTCCATTAGC+TGG | + | chr3.2:69334691-69334710 | MS.gene25915:CDS | 40.0% | |
| AACCGAACCTCCTATTTCAT+AGG | + | chr3.2:69338531-69338550 | MS.gene25915:intron | 40.0% | |
| AATTGCAGAAGAGAGAGTTG+TGG | + | chr3.2:69334603-69334622 | MS.gene25915:CDS | 40.0% | |
| ACATTCCAAATGACACCGTT+AGG | + | chr3.2:69338370-69338389 | MS.gene25915:intron | 40.0% | |
| AGAGATTGGATGATGAACCA+TGG | - | chr3.2:69334722-69334741 | None:intergenic | 40.0% | |
| AGGTAAATCCGAGCCAAATT+AGG | - | chr3.2:69334848-69334867 | None:intergenic | 40.0% | |
| ATAAGACAGTAAACAGCAGC+AGG | - | chr3.2:69336209-69336228 | None:intergenic | 40.0% | |
| ATAAGTTTGTGAGACTCTCG+GGG | + | chr3.2:69334993-69335012 | MS.gene25915:intron | 40.0% | |
| ATACATCAGTGAGAGGTAGA+AGG | + | chr3.2:69337210-69337229 | MS.gene25915:intron | 40.0% | |
| ATCTTGAACGCCGACATTTA+AGG | - | chr3.2:69339548-69339567 | None:intergenic | 40.0% | |
| CAATCGAGATCGGATTAAGA+AGG | - | chr3.2:69336743-69336762 | None:intergenic | 40.0% | |
| CACCTATTAGCAAATGGAGA+TGG | + | chr3.2:69337701-69337720 | MS.gene25915:CDS | 40.0% | |
| CATAAGTTTGTGAGACTCTC+GGG | + | chr3.2:69334992-69335011 | MS.gene25915:intron | 40.0% | |
| CCACACAAGACCTTAAATGT+CGG | + | chr3.2:69339535-69339554 | MS.gene25915:CDS | 40.0% | |
| CTCAGATTCCTAATTTGGCT+CGG | + | chr3.2:69334837-69334856 | MS.gene25915:intron | 40.0% | |
| CTCTCATAACACAGATCAAG+TGG | - | chr3.2:69337998-69338017 | None:intergenic | 40.0% | |
| CTTCAAAGATGTCATCATGG+AGG | + | chr3.2:69335560-69335579 | MS.gene25915:CDS | 40.0% | |
| GAGAACCTACATGATATGCA+GGG | - | chr3.2:69338562-69338581 | None:intergenic | 40.0% | |
| GAGATTGGATGATGAACCAT+GGG | - | chr3.2:69334721-69334740 | None:intergenic | 40.0% | |
| GAGTAGAAAAATAGTAGGCC+GGG | - | chr3.2:69335423-69335442 | None:intergenic | 40.0% | |
| GCCATTAATCCAACCTAACA+GGG | - | chr3.2:69335199-69335218 | None:intergenic | 40.0% | |
| GCGAAATTGCGAAAGATACA+AGG | - | chr3.2:69337669-69337688 | None:intergenic | 40.0% | |
| GCTAATGGAAAGAGTGGTTT+AGG | - | chr3.2:69334691-69334710 | None:intergenic | 40.0% | |
| GCTAATGTGGTTGAACAGAT+TGG | + | chr3.2:69338686-69338705 | MS.gene25915:intron | 40.0% | |
| GGGAACAAATCAAAACTCCT+GGG | + | chr3.2:69337544-69337563 | MS.gene25915:CDS | 40.0% | |
| GGTCAGTATTTCAACCTAAC+AGG | - | chr3.2:69334938-69334957 | None:intergenic | 40.0% | |
| GGTTGAAATACTGACCTGTT+TGG | + | chr3.2:69334942-69334961 | MS.gene25915:intron | 40.0% | |
| GTAATTGGAAAAGACTCTGG+TGG | + | chr3.2:69337338-69337357 | MS.gene25915:intron | 40.0% | |
| TAAGACAGTAAACAGCAGCA+GGG | - | chr3.2:69336208-69336227 | None:intergenic | 40.0% | |
| TAAGATGACTGTGAAAGCCT+CGG | - | chr3.2:69337839-69337858 | None:intergenic | 40.0% | |
| TCAACCTAACAGGGAGTTTA+AGG | - | chr3.2:69334928-69334947 | None:intergenic | 40.0% | |
| TCACATGTACTACCCACTTA+AGG | - | chr3.2:69337130-69337149 | None:intergenic | 40.0% | |
| TCCAATCTGACATAATTCGC+CGG | - | chr3.2:69337459-69337478 | None:intergenic | 40.0% | |
| TGAACAAGACAAGTGAGGAA+GGG | - | chr3.2:69335478-69335497 | None:intergenic | 40.0% | |
| TGATTCATAGCAGGAGACTA+TGG | + | chr3.2:69337263-69337282 | MS.gene25915:intron | 40.0% | |
| TGGGAACAAATCAAAACTCC+TGG | + | chr3.2:69337543-69337562 | MS.gene25915:CDS | 40.0% | |
| TTAAGTGGGTAGTACATGTG+AGG | + | chr3.2:69337129-69337148 | MS.gene25915:intron | 40.0% | |
| TTTGCAGATATTGATACGCC+AGG | - | chr3.2:69338713-69338732 | None:intergenic | 40.0% | |
| ! | AAGTTTGGGGTCACTATACT+TGG | + | chr3.2:69339103-69339122 | MS.gene25915:CDS | 40.0% |
| ! | ACTTTTCGACAAGCAGAGAT+TGG | - | chr3.2:69334736-69334755 | None:intergenic | 40.0% |
| ! | CATTTAAGGTCTTGTGTGGA+AGG | - | chr3.2:69339534-69339553 | None:intergenic | 40.0% |
| ! | CTCCATTTGCTAATAGGTGA+GGG | - | chr3.2:69337700-69337719 | None:intergenic | 40.0% |
| ! | GGGAACAATACTGGTTGTTA+AGG | + | chr3.2:69335932-69335951 | MS.gene25915:CDS | 40.0% |
| ! | TCCATTTGCTAATAGGTGAG+GGG | - | chr3.2:69337699-69337718 | None:intergenic | 40.0% |
| ! | TCTCCATTTGCTAATAGGTG+AGG | - | chr3.2:69337701-69337720 | None:intergenic | 40.0% |
| !! | CCTCTTTTTGAAGGTTTCTC+CGG | + | chr3.2:69336029-69336048 | MS.gene25915:intron | 40.0% |
| !! | TATGGCCTTGTTTCATAGCA+GGG | + | chr3.2:69337281-69337300 | MS.gene25915:intron | 40.0% |
| !! | TCCCTGTTAGGTTGGATTAA+TGG | + | chr3.2:69335195-69335214 | MS.gene25915:intron | 40.0% |
| !! | TGTTAGGTTGGATTAATGGC+CGG | + | chr3.2:69335199-69335218 | MS.gene25915:intron | 40.0% |
| !! | TTGGCTCGGATTTACCTTAT+TGG | + | chr3.2:69334851-69334870 | MS.gene25915:CDS | 40.0% |
| !!! | TTTTTGAGGCCCATCGTTTT+TGG | - | chr3.2:69338101-69338120 | None:intergenic | 40.0% |
| AACCACTACCTCATCCTCAA+CGG | - | chr3.2:69339497-69339516 | None:intergenic | 45.0% | |
| AAGATGACTGTGAAAGCCTC+GGG | - | chr3.2:69337838-69337857 | None:intergenic | 45.0% | |
| AAGGTCACTAACCTGCAATC+AGG | - | chr3.2:69336244-69336263 | None:intergenic | 45.0% | |
| ACCGGCGAATTATGTCAGAT+TGG | + | chr3.2:69337455-69337474 | MS.gene25915:CDS | 45.0% | |
| ACGACCTTAAACTCCCTGTT+AGG | + | chr3.2:69334921-69334940 | MS.gene25915:CDS | 45.0% | |
| ATATCCTCTCACCTCTTGCA+GGG | + | chr3.2:69337484-69337503 | MS.gene25915:CDS | 45.0% | |
| CAAAGATGTCATCATGGAGG+AGG | + | chr3.2:69335563-69335582 | MS.gene25915:CDS | 45.0% | |
| CAATGCCCTGCTATGAAACA+AGG | - | chr3.2:69337289-69337308 | None:intergenic | 45.0% | |
| CATGGTGAACAAGACAAGTG+AGG | - | chr3.2:69335483-69335502 | None:intergenic | 45.0% | |
| CCGGAGAAACCTTCAAAAAG+AGG | - | chr3.2:69336032-69336051 | None:intergenic | 45.0% | |
| CTGAGAAGAAACACCCTCAA+TGG | - | chr3.2:69336310-69336329 | None:intergenic | 45.0% | |
| GAAAAATAGTAGGCCGGGTT+CGG | - | chr3.2:69335418-69335437 | None:intergenic | 45.0% | |
| GAAATCCTCCATTGGACGAT+GGG | + | chr3.2:69338908-69338927 | MS.gene25915:CDS | 45.0% | |
| GAACAAGACAAGTGAGGAAG+GGG | - | chr3.2:69335477-69335496 | None:intergenic | 45.0% | |
| GGAGAACCTACATGATATGC+AGG | - | chr3.2:69338563-69338582 | None:intergenic | 45.0% | |
| GGCCATTAATCCAACCTAAC+AGG | - | chr3.2:69335200-69335219 | None:intergenic | 45.0% | |
| GTGAACAAGACAAGTGAGGA+AGG | - | chr3.2:69335479-69335498 | None:intergenic | 45.0% | |
| GTTCTTCTGTAGGAGTCTAC+CGG | + | chr3.2:69337437-69337456 | MS.gene25915:intron | 45.0% | |
| GTTGGATGGAAATCCTCCAT+TGG | + | chr3.2:69338900-69338919 | MS.gene25915:CDS | 45.0% | |
| TACCAATTCCCCAAATTCGC+TGG | - | chr3.2:69336061-69336080 | None:intergenic | 45.0% | |
| TCCCCTCACCTATTAGCAAA+TGG | + | chr3.2:69337695-69337714 | MS.gene25915:CDS | 45.0% | |
| TGCAAGAGTTCATTGCTGAC+AGG | - | chr3.2:69336090-69336109 | None:intergenic | 45.0% | |
| TGTCCAGCTAATGGAAAGAG+TGG | - | chr3.2:69334697-69334716 | None:intergenic | 45.0% | |
| TTGATGCATATCATCAGGGC+CGG | + | chr3.2:69338037-69338056 | MS.gene25915:intron | 45.0% | |
| TTTCCTCTGCCACAAATGCT+GGG | + | chr3.2:69335726-69335745 | MS.gene25915:CDS | 45.0% | |
| ! | AACAGGGAGTTTAAGGTCGT+TGG | - | chr3.2:69334921-69334940 | None:intergenic | 45.0% |
| ! | AACTGTTTCTTCCCTGCAAG+AGG | - | chr3.2:69337498-69337517 | None:intergenic | 45.0% |
| ! | CCGACATTTAAGGTCTTGTG+TGG | - | chr3.2:69339538-69339557 | None:intergenic | 45.0% |
| ! | GAGTTTAAGGTCGTTGGAGA+TGG | - | chr3.2:69334915-69334934 | None:intergenic | 45.0% |
| ! | TTTTCCTCTGCCACAAATGC+TGG | + | chr3.2:69335725-69335744 | MS.gene25915:CDS | 45.0% |
| !! | CTATGGCCTTGTTTCATAGC+AGG | + | chr3.2:69337280-69337299 | MS.gene25915:intron | 45.0% |
| !! | TTGAGGGTGTTTCTTCTCAG+CGG | + | chr3.2:69336310-69336329 | MS.gene25915:CDS | 45.0% |
| AACCGAGCCTCCAAAAACGA+TGG | + | chr3.2:69338088-69338107 | MS.gene25915:intron | 50.0% | |
| AACGGCCCTGCATATCATGT+AGG | + | chr3.2:69338554-69338573 | MS.gene25915:intron | 50.0% | |
| AAGCAATGCAGCAGGACACA+AGG | + | chr3.2:69336547-69336566 | MS.gene25915:CDS | 50.0% | |
| ACCGAGCCTCCAAAAACGAT+GGG | + | chr3.2:69338089-69338108 | MS.gene25915:intron | 50.0% | |
| ACTCCTACGTCGTAGGAAAG+GGG | - | chr3.2:69338349-69338368 | None:intergenic | 50.0% | |
| AGATGACTGTGAAAGCCTCG+GGG | - | chr3.2:69337837-69337856 | None:intergenic | 50.0% | |
| AGCCAGCGAATTTGGGGAAT+TGG | + | chr3.2:69336056-69336075 | MS.gene25915:CDS | 50.0% | |
| AGGTGAATCTGTTGCCGTTG+AGG | + | chr3.2:69339480-69339499 | MS.gene25915:intron | 50.0% | |
| ATCTGTTGCCGTTGAGGATG+AGG | + | chr3.2:69339486-69339505 | MS.gene25915:CDS | 50.0% | |
| CACTCCTACGTCGTAGGAAA+GGG | - | chr3.2:69338350-69338369 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | - | chr3.2:69338544-69338563 | None:intergenic | 50.0% | |
| CTAATAGGTGAGGGGATGTG+TGG | - | chr3.2:69337691-69337710 | None:intergenic | 50.0% | |
| CTGCAAGCTTACCTGATTGC+AGG | + | chr3.2:69336230-69336249 | MS.gene25915:intron | 50.0% | |
| CTGCTGCATTGCTTCAAAGC+TGG | - | chr3.2:69336541-69336560 | None:intergenic | 50.0% | |
| GAATGTCACTCCTACGTCGT+AGG | - | chr3.2:69338356-69338375 | None:intergenic | 50.0% | |
| GAGAGTTGTGGCGGTTATCA+TGG | + | chr3.2:69334615-69334634 | MS.gene25915:CDS | 50.0% | |
| GATATCCTCTCACCTCTTGC+AGG | + | chr3.2:69337483-69337502 | MS.gene25915:CDS | 50.0% | |
| GCAAATGCTCGTATAGGAGC+TGG | + | chr3.2:69338728-69338747 | MS.gene25915:CDS | 50.0% | |
| GCAACAGATTCACCTGGTCA+CGG | - | chr3.2:69339475-69339494 | None:intergenic | 50.0% | |
| GGAAATCCTCCATTGGACGA+TGG | + | chr3.2:69338907-69338926 | MS.gene25915:CDS | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | chr3.2:69338541-69338560 | None:intergenic | 50.0% | |
| GGTTGGATTAATGGCCGGTT+TGG | + | chr3.2:69335204-69335223 | MS.gene25915:intron | 50.0% | |
| GTTGTGGCGGTTATCATGGT+TGG | + | chr3.2:69334619-69334638 | MS.gene25915:CDS | 50.0% | |
| TCAACGGCAACAGATTCACC+TGG | - | chr3.2:69339481-69339500 | None:intergenic | 50.0% | |
| TCACTCCTACGTCGTAGGAA+AGG | - | chr3.2:69338351-69338370 | None:intergenic | 50.0% | |
| TCCATTAGCTGGACAACCCA+TGG | + | chr3.2:69334702-69334721 | MS.gene25915:CDS | 50.0% | |
| TCTTCTCAGCGGAAAGACAG+AGG | + | chr3.2:69336321-69336340 | MS.gene25915:CDS | 50.0% | |
| TGCAGAAGAGAGAGTTGTGG+CGG | + | chr3.2:69334606-69334625 | MS.gene25915:CDS | 50.0% | |
| TGGTGGCATGGGAACAATAC+TGG | + | chr3.2:69335923-69335942 | MS.gene25915:CDS | 50.0% | |
| TGTCATCATGGAGGAGGATC+CGG | + | chr3.2:69335569-69335588 | MS.gene25915:CDS | 50.0% | |
| TTACCCAGCATTTGTGGCAG+AGG | - | chr3.2:69335732-69335751 | None:intergenic | 50.0% | |
| TTGAAGGAGGACAAGCCTCA+TGG | + | chr3.2:69335516-69335535 | MS.gene25915:CDS | 50.0% | |
| TTTCCCCTTTCCTACGACGT+AGG | + | chr3.2:69338343-69338362 | MS.gene25915:intron | 50.0% | |
| ! | AAAGGTGCATCCGTCTGCAA+AGG | + | chr3.2:69337772-69337791 | MS.gene25915:CDS | 50.0% |
| ! | ACCATGGGTTGTCCAGCTAA+TGG | - | chr3.2:69334706-69334725 | None:intergenic | 50.0% |
| ! | GTGGTTGAACAGATTGGTCC+TGG | + | chr3.2:69338692-69338711 | MS.gene25915:intron | 50.0% |
| !! | ACATCTAGTTCTCTACCCCG+AGG | + | chr3.2:69337819-69337838 | MS.gene25915:intron | 50.0% |
| !! | CAGCTTTGAAGCAATGCAGC+AGG | + | chr3.2:69336539-69336558 | MS.gene25915:CDS | 50.0% |
| !! | TTGAGGCCCATCGTTTTTGG+AGG | - | chr3.2:69338098-69338117 | None:intergenic | 50.0% |
| ACGGAATCGAGTGCCTTTGG+TGG | - | chr3.2:69334650-69334669 | None:intergenic | 55.0% | |
| AGAACCTCTTGCACTCCCCA+GGG | - | chr3.2:69338064-69338083 | None:intergenic | 55.0% | |
| CAGCAGCAGGGAAGAGAGAA+AGG | - | chr3.2:69336196-69336215 | None:intergenic | 55.0% | |
| CGGAATCGAGTGCCTTTGGT+GGG | - | chr3.2:69334649-69334668 | None:intergenic | 55.0% | |
| CGGAGTCAGCCAGCGAATTT+GGG | + | chr3.2:69336049-69336068 | MS.gene25915:CDS | 55.0% | |
| CTCGTATAGGAGCTGGTGCA+AGG | + | chr3.2:69338735-69338754 | MS.gene25915:CDS | 55.0% | |
| GACGGATGCACCTTTGCTGA+TGG | - | chr3.2:69337767-69337786 | None:intergenic | 55.0% | |
| GGAATCGAGTGCCTTTGGTG+GGG | - | chr3.2:69334648-69334667 | None:intergenic | 55.0% | |
| GGAGTCAGCCAGCGAATTTG+GGG | + | chr3.2:69336050-69336069 | MS.gene25915:CDS | 55.0% | |
| GTGGCGGTTATCATGGTTGG+AGG | + | chr3.2:69334622-69334641 | MS.gene25915:CDS | 55.0% | |
| TAGAACCTCTTGCACTCCCC+AGG | - | chr3.2:69338065-69338084 | None:intergenic | 55.0% | |
| TCTTCCCTGCAAGAGGTGAG+AGG | - | chr3.2:69337491-69337510 | None:intergenic | 55.0% | |
| TGCCGTTGAGGATGAGGTAG+TGG | + | chr3.2:69339492-69339511 | MS.gene25915:CDS | 55.0% | |
| TGGACGGAATCGAGTGCCTT+TGG | - | chr3.2:69334653-69334672 | None:intergenic | 55.0% | |
| ! | CCAAATTCGCTGGCTGACTC+CGG | - | chr3.2:69336051-69336070 | None:intergenic | 55.0% |
| ! | GACAAGCCTCATGGTTCTGC+CGG | + | chr3.2:69335525-69335544 | MS.gene25915:CDS | 55.0% |
| !! | GCCCATCGTTTTTGGAGGCT+CGG | - | chr3.2:69338093-69338112 | None:intergenic | 55.0% |
| ACGTGCCCATCGTCCAATGG+AGG | - | chr3.2:69338916-69338935 | None:intergenic | 60.0% | |
| AGACCACCGGCAGAACCATG+AGG | - | chr3.2:69335534-69335553 | None:intergenic | 60.0% | |
| ATATCATCAGGGCCGGACCC+TGG | + | chr3.2:69338044-69338063 | MS.gene25915:intron | 60.0% | |
| ATGGTTGGAGGCCCCACCAA+AGG | + | chr3.2:69334634-69334653 | MS.gene25915:CDS | 60.0% | |
| CCGGAGTCAGCCAGCGAATT+TGG | + | chr3.2:69336048-69336067 | MS.gene25915:CDS | 60.0% | |
| CTTGTTCTCGTGCCGTGACC+AGG | + | chr3.2:69339460-69339479 | MS.gene25915:intron | 60.0% | |
| GACACGTGCCCATCGTCCAA+TGG | - | chr3.2:69338919-69338938 | None:intergenic | 60.0% | |
| GGCACGTGTCCAGGCAAGTT+TGG | + | chr3.2:69338929-69338948 | MS.gene25915:intron | 60.0% | |
| TATCATCAGGGCCGGACCCT+GGG | + | chr3.2:69338045-69338064 | MS.gene25915:intron | 60.0% | |
| ! | AAGCCTCATGGTTCTGCCGG+TGG | + | chr3.2:69335528-69335547 | MS.gene25915:CDS | 60.0% |
| ATCATCAGGGCCGGACCCTG+GGG | + | chr3.2:69338046-69338065 | MS.gene25915:intron | 65.0% | |
| CTCTTGCACTCCCCAGGGTC+CGG | - | chr3.2:69338059-69338078 | None:intergenic | 65.0% | |
| TGGACGATGGGCACGTGTCC+AGG | + | chr3.2:69338920-69338939 | MS.gene25915:CDS | 65.0% | |
| ! | CGGACCCTGGGGAGTGCAAG+AGG | + | chr3.2:69338057-69338076 | MS.gene25915:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69334598 | 69339582 | 69334598 | ID=MS.gene25915 |
| chr3.2 | mRNA | 69334598 | 69339582 | 69334598 | ID=MS.gene25915.t1;Parent=MS.gene25915 |
| chr3.2 | exon | 69334598 | 69334753 | 69334598 | ID=MS.gene25915.t1.exon1;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69334598 | 69334753 | 69334598 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69334842 | 69334942 | 69334842 | ID=MS.gene25915.t1.exon2;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69334842 | 69334942 | 69334842 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69335512 | 69335590 | 69335512 | ID=MS.gene25915.t1.exon3;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69335512 | 69335590 | 69335512 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69335687 | 69335747 | 69335687 | ID=MS.gene25915.t1.exon4;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69335687 | 69335747 | 69335687 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69335907 | 69335953 | 69335907 | ID=MS.gene25915.t1.exon5;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69335907 | 69335953 | 69335907 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69336042 | 69336134 | 69336042 | ID=MS.gene25915.t1.exon6;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69336042 | 69336134 | 69336042 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69336252 | 69336342 | 69336252 | ID=MS.gene25915.t1.exon7;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69336252 | 69336342 | 69336252 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69336520 | 69336568 | 69336520 | ID=MS.gene25915.t1.exon8;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69336520 | 69336568 | 69336520 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69337449 | 69337565 | 69337449 | ID=MS.gene25915.t1.exon9;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69337449 | 69337565 | 69337449 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69337646 | 69337793 | 69337646 | ID=MS.gene25915.t1.exon10;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69337646 | 69337793 | 69337646 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69338704 | 69338796 | 69338704 | ID=MS.gene25915.t1.exon11;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69338704 | 69338796 | 69338704 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69338873 | 69338941 | 69338873 | ID=MS.gene25915.t1.exon12;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69338873 | 69338941 | 69338873 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69339082 | 69339124 | 69339082 | ID=MS.gene25915.t1.exon13;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69339082 | 69339124 | 69339082 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| chr3.2 | exon | 69339482 | 69339582 | 69339482 | ID=MS.gene25915.t1.exon14;Parent=MS.gene25915.t1 |
| chr3.2 | CDS | 69339482 | 69339582 | 69339482 | ID=cds.MS.gene25915.t1;Parent=MS.gene25915.t1 |
| Gene Sequence |
| Protein sequence |
