Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26447.t1 | XP_003607957.1 | 93.8 | 452 | 27 | 1 | 1 | 452 | 1 | 451 | 2.20E-221 | 778.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26447.t1 | Q8VY09 | 63.2 | 386 | 140 | 2 | 68 | 452 | 88 | 472 | 5.0e-137 | 489.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26447.t1 | G7JL67 | 93.8 | 452 | 27 | 1 | 1 | 452 | 1 | 451 | 1.6e-221 | 778.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049285 | MS.gene26447 | 0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene26447 | 0.805857 | 1.09E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene26447 | 0.848296 | 6.71E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene26447 | 0.865434 | 5.92E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene26447 | 0.832659 | 8.33E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene26447 | 0.802959 | 4.38E-49 | -1.69E-46 |
| MS.gene05087 | MS.gene26447 | 0.829945 | 3.88E-55 | -1.69E-46 |
| MS.gene05100 | MS.gene26447 | 0.801713 | 7.91E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene26447 | 0.806304 | 8.78E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene26447 | 0.818989 | 1.47E-52 | -1.69E-46 |
| MS.gene059079 | MS.gene26447 | 0.843062 | 1.77E-58 | -1.69E-46 |
| MS.gene059102 | MS.gene26447 | -0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene26447 | 0.816886 | 4.39E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene26447 | 0.81597 | 7.04E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene26447 | 0.803763 | 2.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26447.t1 | MTR_4g085900 | 94.912 | 452 | 22 | 1 | 1 | 452 | 1 | 451 | 0.0 | 830 |
| MS.gene26447.t1 | MTR_4g085900 | 95.238 | 336 | 15 | 1 | 1 | 336 | 1 | 335 | 0.0 | 608 |
| MS.gene26447.t1 | MTR_4g085900 | 43.017 | 179 | 101 | 1 | 270 | 447 | 65 | 243 | 1.76e-33 | 129 |
| MS.gene26447.t1 | MTR_2g078060 | 46.682 | 437 | 227 | 5 | 17 | 450 | 7 | 440 | 1.93e-112 | 338 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26447.t1 | AT4G34020 | 60.094 | 426 | 159 | 4 | 29 | 452 | 56 | 472 | 0.0 | 524 |
| MS.gene26447.t1 | AT4G34020 | 61.453 | 358 | 136 | 2 | 96 | 452 | 81 | 437 | 1.43e-163 | 468 |
| MS.gene26447.t1 | AT4G34020 | 37.222 | 180 | 111 | 2 | 65 | 243 | 253 | 431 | 1.29e-28 | 117 |
| MS.gene26447.t1 | AT4G34020 | 62.696 | 319 | 117 | 2 | 135 | 452 | 1 | 318 | 1.83e-146 | 420 |
| MS.gene26447.t1 | AT4G34020 | 37.222 | 180 | 111 | 2 | 65 | 243 | 134 | 312 | 3.51e-29 | 117 |
| MS.gene26447.t1 | AT4G34020 | 62.696 | 319 | 117 | 2 | 135 | 452 | 1 | 318 | 1.83e-146 | 420 |
| MS.gene26447.t1 | AT4G34020 | 37.222 | 180 | 111 | 2 | 65 | 243 | 134 | 312 | 3.51e-29 | 117 |
| MS.gene26447.t1 | AT1G53280 | 47.105 | 380 | 197 | 4 | 58 | 434 | 47 | 425 | 9.24e-111 | 334 |
| MS.gene26447.t1 | AT1G53280 | 42.714 | 199 | 111 | 3 | 251 | 447 | 37 | 234 | 3.61e-41 | 152 |
| MS.gene26447.t1 | AT3G14990 | 47.757 | 379 | 193 | 4 | 64 | 438 | 6 | 383 | 4.88e-104 | 315 |
| MS.gene26447.t1 | AT3G14990 | 43.956 | 182 | 99 | 2 | 269 | 447 | 7 | 188 | 1.04e-40 | 150 |
| MS.gene26447.t1 | AT3G14990 | 36.199 | 221 | 129 | 2 | 25 | 244 | 183 | 392 | 6.39e-30 | 120 |
| MS.gene26447.t1 | AT3G14990 | 47.091 | 361 | 186 | 4 | 82 | 438 | 1 | 360 | 1.16e-96 | 295 |
| MS.gene26447.t1 | AT3G14990 | 41.818 | 165 | 93 | 2 | 286 | 447 | 1 | 165 | 9.92e-33 | 127 |
| MS.gene26447.t1 | AT3G14990 | 36.199 | 221 | 129 | 2 | 25 | 244 | 160 | 369 | 3.90e-30 | 120 |
| MS.gene26447.t1 | AT3G14990 | 47.091 | 361 | 186 | 4 | 82 | 438 | 1 | 360 | 1.16e-96 | 295 |
| MS.gene26447.t1 | AT3G14990 | 41.818 | 165 | 93 | 2 | 286 | 447 | 1 | 165 | 9.92e-33 | 127 |
| MS.gene26447.t1 | AT3G14990 | 36.199 | 221 | 129 | 2 | 25 | 244 | 160 | 369 | 3.90e-30 | 120 |
| MS.gene26447.t1 | AT1G53280 | 47.826 | 322 | 164 | 4 | 64 | 382 | 53 | 373 | 4.76e-96 | 294 |
| MS.gene26447.t1 | AT1G53280 | 42.714 | 199 | 111 | 3 | 251 | 447 | 37 | 234 | 9.06e-42 | 152 |
Find 121 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGAGGAAAATAGGTTATT+TGG | 0.191615 | 4.1:-23751962 | MS.gene26447:CDS |
| TCCACAAGCTTCCAACGTTT+TGG | 0.207481 | 4.1:-23751644 | MS.gene26447:CDS |
| TAATTTATCAGCAACAATTT+TGG | 0.218461 | 4.1:+23750273 | None:intergenic |
| CCTTGGCTGAGCAGCTGTTT+GGG | 0.241099 | 4.1:-23751542 | MS.gene26447:CDS |
| GGTGCATTTGTGGGTGGTGG+TGG | 0.264016 | 4.1:+23752265 | None:intergenic |
| GCTATTGTGAGCAAGTTATT+TGG | 0.265797 | 4.1:-23749257 | MS.gene26447:CDS |
| GGCTGTTAAGTCCAACATTC+AGG | 0.274367 | 4.1:-23751622 | MS.gene26447:CDS |
| GCATTTGTGGGTGGTGGTGG+TGG | 0.281616 | 4.1:+23752268 | None:intergenic |
| ATGGGAAGAAGGACTTTCTT+TGG | 0.285513 | 4.1:+23752238 | None:intergenic |
| GTAAACAAGCTGAGGAAAAT+AGG | 0.293312 | 4.1:-23751970 | MS.gene26447:CDS |
| GTCCTTCTTCCCATCGGTTT+CGG | 0.296223 | 4.1:-23752229 | MS.gene26447:CDS |
| ACCTTGGCTGAGCAGCTGTT+TGG | 0.305489 | 4.1:-23751543 | MS.gene26447:CDS |
| AAGGGAGGTTGCTGAATTCT+TGG | 0.306017 | 4.1:-23751508 | MS.gene26447:intron |
| GAAATGGAGAGGGTGGAGTT+TGG | 0.339859 | 4.1:+23752298 | None:intergenic |
| TTACATGTTTGCTTTAACCT+TGG | 0.343551 | 4.1:-23751559 | MS.gene26447:CDS |
| CGGTTTCGGCACCGAGGAAA+TGG | 0.360850 | 4.1:-23752215 | MS.gene26447:CDS |
| AATTCAGCTGGAAGAATATA+CGG | 0.369869 | 4.1:-23749543 | MS.gene26447:CDS |
| TGGTGGTGGAGAGGTGGAAA+TGG | 0.376467 | 4.1:+23752282 | None:intergenic |
| TTTAAGATTGTCCATGGAAG+AGG | 0.381844 | 4.1:+23749367 | None:intergenic |
| TGGAGGTGAAAGGGTGGGTG+AGG | 0.391211 | 4.1:+23752330 | None:intergenic |
| TGAGAAAACTCTTGGAGTCT+TGG | 0.397662 | 4.1:-23750308 | MS.gene26447:CDS |
| AGGAGTTCAATGAAATTGAT+TGG | 0.403621 | 4.1:-23750543 | MS.gene26447:CDS |
| GTGGAGGTGGGGATGGTGAA+TGG | 0.413705 | 4.1:+23752367 | None:intergenic |
| GCTTTACCTGGAGGAATGCC+TGG | 0.415338 | 4.1:-23752037 | MS.gene26447:CDS |
| CAGCTTCAAGTTGTAGCTGC+TGG | 0.418300 | 4.1:-23752124 | MS.gene26447:CDS |
| TCTTCAGAACCATGCGCGAT+TGG | 0.430665 | 4.1:+23750397 | None:intergenic |
| TGACACTGATAGATATTCTA+AGG | 0.431244 | 4.1:-23750363 | MS.gene26447:CDS |
| TTTAGGGTGAGAGTGGAGGT+GGG | 0.434902 | 4.1:+23752355 | None:intergenic |
| GCTTCTGTTGAGAAAACTCT+TGG | 0.435054 | 4.1:-23750316 | MS.gene26447:CDS |
| GCAAACATGTAAGCAGTTCC+CGG | 0.440613 | 4.1:+23751570 | None:intergenic |
| GTGAGCAAGTTATTTGGTAA+TGG | 0.442489 | 4.1:-23749251 | MS.gene26447:CDS |
| CTTCAGAACCATGCGCGATT+GGG | 0.443538 | 4.1:+23750398 | None:intergenic |
| ACATGATTTGATTATTCTCC+CGG | 0.445948 | 4.1:-23750227 | MS.gene26447:intron |
| GGGTGGTGGTGGTGGAGAGG+TGG | 0.448522 | 4.1:+23752276 | None:intergenic |
| TCCAACATTCAGGTTTCAAA+CGG | 0.449865 | 4.1:-23751612 | MS.gene26447:CDS |
| GCTTACAACAAGCCGTGGCC+CGG | 0.454304 | 4.1:-23751589 | MS.gene26447:CDS |
| GGTGAGAGTGGAGGTGGGGA+TGG | 0.456834 | 4.1:+23752360 | None:intergenic |
| CTCAAAGAACAAAATTCAGC+TGG | 0.460880 | 4.1:-23749555 | MS.gene26447:CDS |
| ATCCACGTCCTCCGTCGTGC+TGG | 0.464137 | 4.1:-23752178 | MS.gene26447:CDS |
| GTGGAGTTTGGAGTGGAGCG+TGG | 0.464947 | 4.1:+23752310 | None:intergenic |
| CACCAGCACGACGGAGGACG+TGG | 0.465570 | 4.1:+23752176 | None:intergenic |
| CCTTGTTTGTGTAGAATAGC+AGG | 0.466355 | 4.1:+23749504 | None:intergenic |
| TTTGATCTTATTGCTTTACC+TGG | 0.471486 | 4.1:-23752049 | MS.gene26447:CDS |
| AAATTTCAGGGAGGAACTGC+TGG | 0.472046 | 4.1:-23749618 | MS.gene26447:intron |
| CACTGTAACGGAGTTTGCAT+TGG | 0.475926 | 4.1:-23749279 | MS.gene26447:CDS |
| CTTGGCTGAGCAGCTGTTTG+GGG | 0.476503 | 4.1:-23751541 | MS.gene26447:CDS |
| GAGTGGAGCGTGGAGGTGAA+AGG | 0.477114 | 4.1:+23752320 | None:intergenic |
| AATGAAATTGATTGGTCTGT+TGG | 0.480796 | 4.1:-23750535 | MS.gene26447:CDS |
| CCAACATTCAGGTTTCAAAC+GGG | 0.482053 | 4.1:-23751611 | MS.gene26447:CDS |
| TGTGGGTGGTGGTGGTGGAG+AGG | 0.482543 | 4.1:+23752273 | None:intergenic |
| CAAGGCAAAAGAGTAACAGC+AGG | 0.482628 | 4.1:+23751923 | None:intergenic |
| TTAGGGTGAGAGTGGAGGTG+GGG | 0.485692 | 4.1:+23752356 | None:intergenic |
| GATAACTGCTTCCATTTCCT+CGG | 0.488668 | 4.1:+23752204 | None:intergenic |
| GATGCCGTAGTAGTTATTGA+TGG | 0.498779 | 4.1:-23749329 | MS.gene26447:CDS |
| TGTAAGCAGTTCCCGGGCCA+CGG | 0.500404 | 4.1:+23751577 | None:intergenic |
| AGTGGAGCGTGGAGGTGAAA+GGG | 0.500650 | 4.1:+23752321 | None:intergenic |
| TGGGGAGTCTGTTGCAAGGG+AGG | 0.503381 | 4.1:-23751523 | MS.gene26447:CDS |
| GGAGCGTGGAGGTGAAAGGG+TGG | 0.504772 | 4.1:+23752324 | None:intergenic |
| CTTGGAGTCTTGGCTTCTCA+AGG | 0.507724 | 4.1:-23750298 | MS.gene26447:CDS |
| ACACAAACAAGGTTTACTAA+AGG | 0.507836 | 4.1:-23749493 | MS.gene26447:intron |
| TGCCGAAACCGATGGGAAGA+AGG | 0.513668 | 4.1:+23752227 | None:intergenic |
| CCCGTTTGAAACCTGAATGT+TGG | 0.515692 | 4.1:+23751611 | None:intergenic |
| TCCTCGGTGCCGAAACCGAT+GGG | 0.516608 | 4.1:+23752220 | None:intergenic |
| GCTCTAGTAGTCTATTTCCT+AGG | 0.517668 | 4.1:+23749188 | None:intergenic |
| TCTCTCAATCTTGCTGAACC+AGG | 0.519163 | 4.1:+23752019 | None:intergenic |
| AGAGGTGGAAATGGAGAGGG+TGG | 0.521499 | 4.1:+23752291 | None:intergenic |
| AAGAAGGACTTTCTTTGGAG+GGG | 0.524408 | 4.1:+23752243 | None:intergenic |
| AATAGCAGGTGAGGAGCAGA+CGG | 0.534057 | 4.1:+23749518 | None:intergenic |
| GGAGGTGAAAGGGTGGGTGA+GGG | 0.535310 | 4.1:+23752331 | None:intergenic |
| CTTACAACAAGCCGTGGCCC+GGG | 0.537057 | 4.1:-23751588 | MS.gene26447:CDS |
| GTTTGGGGAGTCTGTTGCAA+GGG | 0.539143 | 4.1:-23751526 | MS.gene26447:CDS |
| CTGAGGCTCAACGGAAGCTA+CGG | 0.539984 | 4.1:+23752144 | None:intergenic |
| GCTGAACCAGGCATTCCTCC+AGG | 0.543196 | 4.1:+23752031 | None:intergenic |
| GACTTAACAGCCCAAAACGT+TGG | 0.549971 | 4.1:+23751633 | None:intergenic |
| CCCAAAACGTTGGAAGCTTG+TGG | 0.552798 | 4.1:+23751643 | None:intergenic |
| AAGAAGTAGCAGCAACGACA+TGG | 0.554515 | 4.1:+23752426 | None:intergenic |
| AGAAGGACTTTCTTTGGAGG+GGG | 0.554848 | 4.1:+23752244 | None:intergenic |
| GGAGAGGGTGGAGTTTGGAG+TGG | 0.556260 | 4.1:+23752303 | None:intergenic |
| AGTCTTGTTGTGGCGGTGGA+AGG | 0.558922 | 4.1:+23752394 | None:intergenic |
| CCCAAACAGCTGCTCAGCCA+AGG | 0.560232 | 4.1:+23751542 | None:intergenic |
| GAGGAACTGCTGGCGCTCAA+AGG | 0.560324 | 4.1:-23749608 | MS.gene26447:CDS |
| TTCCTCGGTGCCGAAACCGA+TGG | 0.562069 | 4.1:+23752219 | None:intergenic |
| AAGAAAGTCCTTCTTCCCAT+CGG | 0.565062 | 4.1:-23752235 | MS.gene26447:CDS |
| TGATGATAATGTATCTAAGA+AGG | 0.567147 | 4.1:-23750563 | MS.gene26447:CDS |
| TGTTTGGGGAGTCTGTTGCA+AGG | 0.568984 | 4.1:-23751527 | MS.gene26447:CDS |
| AGAGAGTCTTGTTGTGGCGG+TGG | 0.569839 | 4.1:+23752390 | None:intergenic |
| AACTTGAAGCTGAGGCTCAA+CGG | 0.571880 | 4.1:+23752135 | None:intergenic |
| TTTCTCTTCAAAAGACCCCA+AGG | 0.575881 | 4.1:+23751905 | None:intergenic |
| CCTGCTATTCTACACAAACA+AGG | 0.583795 | 4.1:-23749504 | MS.gene26447:CDS |
| TTTGCCATCAATAACTACTA+CGG | 0.585134 | 4.1:+23749325 | None:intergenic |
| TTAAGATTGTCCATGGAAGA+GGG | 0.586260 | 4.1:+23749368 | None:intergenic |
| GGAAGAAGGACTTTCTTTGG+AGG | 0.590110 | 4.1:+23752241 | None:intergenic |
| TGAGGGACTTGCCACTGTAA+CGG | 0.595366 | 4.1:-23749291 | MS.gene26447:CDS |
| GAGCGTGGAGGTGAAAGGGT+GGG | 0.595390 | 4.1:+23752325 | None:intergenic |
| CAAACATGTAAGCAGTTCCC+GGG | 0.595831 | 4.1:+23751571 | None:intergenic |
| GTTCTCATCCCAATCGCGCA+TGG | 0.596389 | 4.1:-23750406 | MS.gene26447:CDS |
| TACAGCTCATCCCTCTTCCA+TGG | 0.598748 | 4.1:-23749378 | MS.gene26447:CDS |
| GATCTTATTGCTTTACCTGG+AGG | 0.601166 | 4.1:-23752046 | MS.gene26447:CDS |
| TCCGTCTTTAAGATTGTCCA+TGG | 0.601178 | 4.1:+23749361 | None:intergenic |
| CTTCAAGTTGTAGCTGCTGG+AGG | 0.607280 | 4.1:-23752121 | MS.gene26447:CDS |
| TGGAGAGGTGGAAATGGAGA+GGG | 0.610101 | 4.1:+23752288 | None:intergenic |
| GTTGTGGCGGTGGAAGGTTG+AGG | 0.612790 | 4.1:+23752400 | None:intergenic |
| GTGGAGAGGTGGAAATGGAG+AGG | 0.615310 | 4.1:+23752287 | None:intergenic |
| AGAGCAAGAAGTGTAGCAGA+AGG | 0.616554 | 4.1:-23749227 | MS.gene26447:CDS |
| TCCATGGACAATCTTAAAGA+CGG | 0.618927 | 4.1:-23749362 | MS.gene26447:CDS |
| GCAGCTACAACTTGAAGCTG+AGG | 0.621580 | 4.1:+23752127 | None:intergenic |
| GAAGAAGGACTTTCTTTGGA+GGG | 0.623385 | 4.1:+23752242 | None:intergenic |
| AATCACATGTAAACAAGCTG+AGG | 0.624888 | 4.1:-23751978 | MS.gene26447:CDS |
| AACGGGCTTACAACAAGCCG+TGG | 0.632694 | 4.1:-23751594 | MS.gene26447:CDS |
| GGCAAAGTGATCACTTGTGA+GGG | 0.639904 | 4.1:-23749308 | MS.gene26447:CDS |
| GAGTTTGGAGTGGAGCGTGG+AGG | 0.641201 | 4.1:+23752313 | None:intergenic |
| TTTGTGTAGAATAGCAGGTG+AGG | 0.652165 | 4.1:+23749509 | None:intergenic |
| GAATGGAGAGAGTCTTGTTG+TGG | 0.655286 | 4.1:+23752384 | None:intergenic |
| TGGAGAGAGTCTTGTTGTGG+CGG | 0.659112 | 4.1:+23752387 | None:intergenic |
| CAATGCAAACTCCGTTACAG+TGG | 0.660685 | 4.1:+23749280 | None:intergenic |
| AAGACAGTAACCTACACTGG+GGG | 0.666507 | 4.1:+23750504 | None:intergenic |
| TCCCATCGGTTTCGGCACCG+AGG | 0.680821 | 4.1:-23752221 | MS.gene26447:CDS |
| CATGAGCACCAGCACGACGG+AGG | 0.694711 | 4.1:+23752170 | None:intergenic |
| TGGCAAAGTGATCACTTGTG+AGG | 0.698032 | 4.1:-23749309 | MS.gene26447:CDS |
| AGACAGTAACCTACACTGGG+GGG | 0.717258 | 4.1:+23750505 | None:intergenic |
| TGACATGAGCACCAGCACGA+CGG | 0.727381 | 4.1:+23752167 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTGTTTGTTTATTATTT+TGG | - | chr4.1:23749894-23749913 | MS.gene26447:intron | 10.0% |
| !!! | CTCTATATTATTTATTTTTA+AGG | + | chr4.1:23751720-23751739 | None:intergenic | 10.0% |
| !! | AAATGTTATTAAAAGTAAAC+AGG | + | chr4.1:23750472-23750491 | None:intergenic | 15.0% |
| !! | ACCTATAAACTTATATTTAT+GGG | - | chr4.1:23751895-23751914 | MS.gene26447:intron | 15.0% |
| !! | ATTTCAAAAAACAATGAAAA+CGG | - | chr4.1:23750599-23750618 | MS.gene26447:intron | 15.0% |
| !! | TAAATAATATAGAGCATATA+TGG | - | chr4.1:23751726-23751745 | MS.gene26447:intron | 15.0% |
| !!! | TTGTTTATTATTTTGGTATT+TGG | - | chr4.1:23749901-23749920 | MS.gene26447:intron | 15.0% |
| !! | ATCTTCAATGTTCAAAATTT+AGG | - | chr4.1:23750748-23750767 | MS.gene26447:intron | 20.0% |
| !! | CACCTATAAACTTATATTTA+TGG | - | chr4.1:23751894-23751913 | MS.gene26447:intron | 20.0% |
| !! | CCTATAAACTTATATTTATG+GGG | - | chr4.1:23751896-23751915 | MS.gene26447:intron | 20.0% |
| !!! | ATCTGTTCATTTTAAATTAG+TGG | - | chr4.1:23750505-23750524 | MS.gene26447:intron | 20.0% |
| !!! | TAATTTATCAGCAACAATTT+TGG | + | chr4.1:23751353-23751372 | None:intergenic | 20.0% |
| !!! | TTTTCATGAATTCATATTAC+CGG | + | chr4.1:23751418-23751437 | None:intergenic | 20.0% |
| ! | AACTATCATAAAAGAAGGAA+GGG | + | chr4.1:23751028-23751047 | None:intergenic | 25.0% |
| ! | AAGATTGTCATGAAATTTCA+GGG | - | chr4.1:23751993-23752012 | MS.gene26447:CDS | 25.0% |
| ! | ATCCAGATTTCAAAATTTCA+GGG | + | chr4.1:23750896-23750915 | None:intergenic | 25.0% |
| ! | ATCGTTTAATTCTTCAGATA+AGG | + | chr4.1:23751938-23751957 | None:intergenic | 25.0% |
| ! | ATTTCTCATCAAACATTTGT+AGG | - | chr4.1:23751753-23751772 | MS.gene26447:intron | 25.0% |
| ! | CCCCATAAATATAAGTTTAT+AGG | + | chr4.1:23751899-23751918 | None:intergenic | 25.0% |
| ! | GAAAATGAAAACAGGAAATA+TGG | - | chr4.1:23750858-23750877 | MS.gene26447:intron | 25.0% |
| ! | GTTGAAATGAAAATGAAAAC+AGG | - | chr4.1:23750850-23750869 | MS.gene26447:intron | 25.0% |
| ! | TAAGATTGTCATGAAATTTC+AGG | - | chr4.1:23751992-23752011 | MS.gene26447:CDS | 25.0% |
| ! | TAGGGAAGAAATGAATATTT+AGG | - | chr4.1:23750180-23750199 | MS.gene26447:intron | 25.0% |
| ! | TCAGAAACTGTAAAAGAAAA+TGG | - | chr4.1:23750789-23750808 | MS.gene26447:intron | 25.0% |
| ! | TCATCAACTATCATAAAAGA+AGG | + | chr4.1:23751033-23751052 | None:intergenic | 25.0% |
| ! | TGTATTGCTAAATATTCATG+TGG | - | chr4.1:23750249-23750268 | MS.gene26447:CDS | 25.0% |
| ! | TTCTTATCCTTTAACAGAAA+AGG | + | chr4.1:23752222-23752241 | None:intergenic | 25.0% |
| ! | TTTCATGAATTCATATTACC+GGG | + | chr4.1:23751417-23751436 | None:intergenic | 25.0% |
| ! | TTTGAACATTGAAGATGTAT+TGG | + | chr4.1:23750744-23750763 | None:intergenic | 25.0% |
| !! | AATTTTGCTTGGAATCTAAA+AGG | - | chr4.1:23750446-23750465 | MS.gene26447:intron | 25.0% |
| !! | CTAAAATCCTTTTCTGTTAA+AGG | - | chr4.1:23752212-23752231 | MS.gene26447:CDS | 25.0% |
| !! | TGACATTTTCACTGTTAAAT+GGG | - | chr4.1:23750627-23750646 | MS.gene26447:intron | 25.0% |
| !! | TGATGATAATGTATCTAAGA+AGG | - | chr4.1:23751060-23751079 | MS.gene26447:intron | 25.0% |
| !! | TTCATTTTAAATTAGTGGCA+AGG | - | chr4.1:23750510-23750529 | MS.gene26447:intron | 25.0% |
| !! | TTGACATTTTCACTGTTAAA+TGG | - | chr4.1:23750626-23750645 | MS.gene26447:intron | 25.0% |
| !! | TTTTCTGTTAAAGGATAAGA+AGG | - | chr4.1:23752221-23752240 | MS.gene26447:CDS | 25.0% |
| !!! | AACAGAAAAGGATTTTAGTA+AGG | + | chr4.1:23752210-23752229 | None:intergenic | 25.0% |
| !!! | ATTATTTTGGTATTTGGATG+AGG | - | chr4.1:23749907-23749926 | MS.gene26447:intron | 25.0% |
| AACTGTAAAAGAAAATGGTG+CGG | - | chr4.1:23750794-23750813 | MS.gene26447:intron | 30.0% | |
| AATCATATACTTCTGCAATG+TGG | + | chr4.1:23751664-23751683 | None:intergenic | 30.0% | |
| AATTCAGCTGGAAGAATATA+CGG | - | chr4.1:23752080-23752099 | MS.gene26447:CDS | 30.0% | |
| AATTGGATCAAGAATCACAA+TGG | + | chr4.1:23752176-23752195 | None:intergenic | 30.0% | |
| ACACAAACAAGGTTTACTAA+AGG | - | chr4.1:23752130-23752149 | MS.gene26447:CDS | 30.0% | |
| ACATACTGAATTAGTTGAAC+TGG | - | chr4.1:23750370-23750389 | MS.gene26447:CDS | 30.0% | |
| ACATGATTTGATTATTCTCC+CGG | - | chr4.1:23751396-23751415 | MS.gene26447:intron | 30.0% | |
| ACATTATACATCTAACAGCT+TGG | - | chr4.1:23750697-23750716 | MS.gene26447:intron | 30.0% | |
| AGAATCACAATGGTAACAAA+AGG | + | chr4.1:23752166-23752185 | None:intergenic | 30.0% | |
| AGATAAGGACTACAATTTGA+AGG | + | chr4.1:23751923-23751942 | None:intergenic | 30.0% | |
| AGGAGTTCAATGAAATTGAT+TGG | - | chr4.1:23751080-23751099 | MS.gene26447:intron | 30.0% | |
| ATAATTGTGTTCGAGAGAAA+TGG | - | chr4.1:23750555-23750574 | MS.gene26447:CDS | 30.0% | |
| CAACTATCATAAAAGAAGGA+AGG | + | chr4.1:23751029-23751048 | None:intergenic | 30.0% | |
| CATTATACATCTAACAGCTT+GGG | - | chr4.1:23750698-23750717 | MS.gene26447:intron | 30.0% | |
| CTTGAAGTCAACATTATAAC+TGG | - | chr4.1:23750208-23750227 | MS.gene26447:intron | 30.0% | |
| GAATCACAATGGTAACAAAA+GGG | + | chr4.1:23752165-23752184 | None:intergenic | 30.0% | |
| GATAAGGACTACAATTTGAA+GGG | + | chr4.1:23751922-23751941 | None:intergenic | 30.0% | |
| GATCCAGATTTCAAAATTTC+AGG | + | chr4.1:23750897-23750916 | None:intergenic | 30.0% | |
| TGACACTGATAGATATTCTA+AGG | - | chr4.1:23751260-23751279 | MS.gene26447:intron | 30.0% | |
| TTACATGTTTGCTTTAACCT+TGG | - | chr4.1:23750064-23750083 | MS.gene26447:intron | 30.0% | |
| TTTATGCATTGTTGCGATTA+GGG | - | chr4.1:23750162-23750181 | MS.gene26447:intron | 30.0% | |
| TTTGATCTTATTGCTTTACC+TGG | - | chr4.1:23749574-23749593 | MS.gene26447:CDS | 30.0% | |
| TTTGCCATCAATAACTACTA+CGG | + | chr4.1:23752301-23752320 | None:intergenic | 30.0% | |
| ! | ATCATTTTGCATCAATCCTT+TGG | + | chr4.1:23750425-23750444 | None:intergenic | 30.0% |
| ! | ATTGTGATTTTGTTGAAGCT+CGG | - | chr4.1:23749809-23749828 | MS.gene26447:intron | 30.0% |
| ! | GCAAAATGATGAATTTTGCT+TGG | - | chr4.1:23750435-23750454 | MS.gene26447:intron | 30.0% |
| ! | TTTTATGCATTGTTGCGATT+AGG | - | chr4.1:23750161-23750180 | MS.gene26447:intron | 30.0% |
| ! | TTTTCACTGTTAAATGGGAT+TGG | - | chr4.1:23750632-23750651 | MS.gene26447:intron | 30.0% |
| !! | AATGAAATTGATTGGTCTGT+TGG | - | chr4.1:23751088-23751107 | MS.gene26447:intron | 30.0% |
| !!! | AAATTTTGAAATCTGGATCC+TGG | - | chr4.1:23750898-23750917 | MS.gene26447:intron | 30.0% |
| !!! | AATTTTGAAATCTGGATCCT+GGG | - | chr4.1:23750899-23750918 | MS.gene26447:intron | 30.0% |
| !!! | ATGAGAACTGACTTTTTTGA+TGG | + | chr4.1:23751514-23751533 | None:intergenic | 30.0% |
| AATCACATGTAAACAAGCTG+AGG | - | chr4.1:23749645-23749664 | MS.gene26447:intron | 35.0% | |
| ACATGTATGTTATGCTAACC+AGG | - | chr4.1:23751195-23751214 | MS.gene26447:intron | 35.0% | |
| ACTGTAAAAGAAAATGGTGC+GGG | - | chr4.1:23750795-23750814 | MS.gene26447:intron | 35.0% | |
| ATAAATCAACACCAAAACCC+AGG | + | chr4.1:23750919-23750938 | None:intergenic | 35.0% | |
| ATAAGACAGTAACCTACACT+GGG | + | chr4.1:23751124-23751143 | None:intergenic | 35.0% | |
| ATCTTAGCAACAAAGAACGA+TGG | + | chr4.1:23751978-23751997 | None:intergenic | 35.0% | |
| ATTGGAATCCCATATTGATC+AGG | + | chr4.1:23750726-23750745 | None:intergenic | 35.0% | |
| ATTGTCATGAAATTTCAGGG+AGG | - | chr4.1:23751996-23752015 | MS.gene26447:CDS | 35.0% | |
| CAAACAATATAGCGAGTGTT+TGG | + | chr4.1:23749884-23749903 | None:intergenic | 35.0% | |
| CAAACATGCACGAAACAAAA+AGG | + | chr4.1:23749756-23749775 | None:intergenic | 35.0% | |
| CTCAAAGAACAAAATTCAGC+TGG | - | chr4.1:23752068-23752087 | MS.gene26447:CDS | 35.0% | |
| GCATCAGATATCACAAAGAA+TGG | + | chr4.1:23750966-23750985 | None:intergenic | 35.0% | |
| GCTATTGTGAGCAAGTTATT+TGG | - | chr4.1:23752366-23752385 | MS.gene26447:CDS | 35.0% | |
| GCTGAGGAAAATAGGTTATT+TGG | - | chr4.1:23749661-23749680 | MS.gene26447:intron | 35.0% | |
| GGTGGAAAACAAAAATCCAA+AGG | - | chr4.1:23750406-23750425 | MS.gene26447:CDS | 35.0% | |
| GTAAACAAGCTGAGGAAAAT+AGG | - | chr4.1:23749653-23749672 | MS.gene26447:intron | 35.0% | |
| GTAAGGCTTCACTAAAGAAT+TGG | + | chr4.1:23752193-23752212 | None:intergenic | 35.0% | |
| GTGAGCAAGTTATTTGGTAA+TGG | - | chr4.1:23752372-23752391 | MS.gene26447:CDS | 35.0% | |
| GTTTATAGGTGCTTATGAAG+AGG | + | chr4.1:23751885-23751904 | None:intergenic | 35.0% | |
| TAAGTTTGTCAGAATCACAG+TGG | + | chr4.1:23749853-23749872 | None:intergenic | 35.0% | |
| TATAAGACAGTAACCTACAC+TGG | + | chr4.1:23751125-23751144 | None:intergenic | 35.0% | |
| TCAATTTGTAAGCCCTGAAT+TGG | - | chr4.1:23750272-23750291 | MS.gene26447:CDS | 35.0% | |
| TCCATGGACAATCTTAAAGA+CGG | - | chr4.1:23752261-23752280 | MS.gene26447:CDS | 35.0% | |
| TCCTAGGATACTCAAAAACA+AGG | + | chr4.1:23752422-23752441 | None:intergenic | 35.0% | |
| TCTTAGCAACAAAGAACGAT+GGG | + | chr4.1:23751977-23751996 | None:intergenic | 35.0% | |
| TGTTATCTTGCAAGACAAAC+TGG | + | chr4.1:23749943-23749962 | None:intergenic | 35.0% | |
| TTAAGATTGTCCATGGAAGA+GGG | + | chr4.1:23752258-23752277 | None:intergenic | 35.0% | |
| TTGTGATATCTGATGCATGT+TGG | - | chr4.1:23750970-23750989 | MS.gene26447:intron | 35.0% | |
| ! | TCCAACATTCAGGTTTCAAA+CGG | - | chr4.1:23750011-23750030 | MS.gene26447:intron | 35.0% |
| ! | TTTAAGATTGTCCATGGAAG+AGG | + | chr4.1:23752259-23752278 | None:intergenic | 35.0% |
| !!! | GACCCTGAAATTTTGAAATC+TGG | - | chr4.1:23750891-23750910 | MS.gene26447:intron | 35.0% |
| !!! | GCTGCATTTTTTTTTGTCTG+TGG | - | chr4.1:23751448-23751467 | MS.gene26447:intron | 35.0% |
| !!! | TCATTCTTTGAGCTAGCTTT+TGG | + | chr4.1:23750665-23750684 | None:intergenic | 35.0% |
| AAGAAAGTCCTTCTTCCCAT+CGG | - | chr4.1:23749388-23749407 | MS.gene26447:CDS | 40.0% | |
| ATGCGTTATCACACCAATTC+AGG | + | chr4.1:23750288-23750307 | None:intergenic | 40.0% | |
| ATGGGAAGAAGGACTTTCTT+TGG | + | chr4.1:23749388-23749407 | None:intergenic | 40.0% | |
| CCTGCTATTCTACACAAACA+AGG | - | chr4.1:23752119-23752138 | MS.gene26447:CDS | 40.0% | |
| CTTGGGAACCTGATCAATAT+GGG | - | chr4.1:23750715-23750734 | MS.gene26447:intron | 40.0% | |
| GAAAATGGTGCGGGAAAAAT+TGG | - | chr4.1:23750804-23750823 | MS.gene26447:intron | 40.0% | |
| GAAGAAGGACTTTCTTTGGA+GGG | + | chr4.1:23749384-23749403 | None:intergenic | 40.0% | |
| GAAGCTTGTGGAAAAATGCA+GGG | + | chr4.1:23749971-23749990 | None:intergenic | 40.0% | |
| GATAACTGCTTCCATTTCCT+CGG | + | chr4.1:23749422-23749441 | None:intergenic | 40.0% | |
| GATCTTATTGCTTTACCTGG+AGG | - | chr4.1:23749577-23749596 | MS.gene26447:CDS | 40.0% | |
| GATGCCGTAGTAGTTATTGA+TGG | - | chr4.1:23752294-23752313 | MS.gene26447:CDS | 40.0% | |
| GCTTCTGTTGAGAAAACTCT+TGG | - | chr4.1:23751307-23751326 | MS.gene26447:intron | 40.0% | |
| TAAGACAGTAACCTACACTG+GGG | + | chr4.1:23751123-23751142 | None:intergenic | 40.0% | |
| TGAACTGGAGAGTTTACGAA+GGG | - | chr4.1:23750385-23750404 | MS.gene26447:CDS | 40.0% | |
| TGAGAAAACTCTTGGAGTCT+TGG | - | chr4.1:23751315-23751334 | MS.gene26447:intron | 40.0% | |
| TGCGTTATCACACCAATTCA+GGG | + | chr4.1:23750287-23750306 | None:intergenic | 40.0% | |
| TTGAACTGGAGAGTTTACGA+AGG | - | chr4.1:23750384-23750403 | MS.gene26447:CDS | 40.0% | |
| TTGTGTTCGAGAGAAATGGA+AGG | - | chr4.1:23750559-23750578 | MS.gene26447:CDS | 40.0% | |
| TTTCTCTTCAAAAGACCCCA+AGG | + | chr4.1:23749721-23749740 | None:intergenic | 40.0% | |
| TTTGTGTAGAATAGCAGGTG+AGG | + | chr4.1:23752117-23752136 | None:intergenic | 40.0% | |
| ! | AAGAAGGACTTTCTTTGGAG+GGG | + | chr4.1:23749383-23749402 | None:intergenic | 40.0% |
| ! | CCAACATTCAGGTTTCAAAC+GGG | - | chr4.1:23750012-23750031 | MS.gene26447:intron | 40.0% |
| ! | CCTTGTTTGTGTAGAATAGC+AGG | + | chr4.1:23752122-23752141 | None:intergenic | 40.0% |
| ! | TGCTGTTACTCTTTTGCCTT+GGG | - | chr4.1:23749702-23749721 | MS.gene26447:intron | 40.0% |
| ! | TGGTGTGATAACGCATAAAC+CGG | - | chr4.1:23750292-23750311 | MS.gene26447:CDS | 40.0% |
| !! | GGGTCTTTTGAAGAGAAAGA+AGG | - | chr4.1:23749723-23749742 | MS.gene26447:intron | 40.0% |
| !! | TCCGTCTTTAAGATTGTCCA+TGG | + | chr4.1:23752265-23752284 | None:intergenic | 40.0% |
| !!! | CTTTGAGCTAGCTTTTGGAT+GGG | + | chr4.1:23750660-23750679 | None:intergenic | 40.0% |
| !!! | GCCTTGTTTTTGAGTATCCT+AGG | - | chr4.1:23752418-23752437 | MS.gene26447:CDS | 40.0% |
| !!! | TCTTTGAGCTAGCTTTTGGA+TGG | + | chr4.1:23750661-23750680 | None:intergenic | 40.0% |
| AAATTTCAGGGAGGAACTGC+TGG | - | chr4.1:23752005-23752024 | MS.gene26447:CDS | 45.0% | |
| AACTTGAAGCTGAGGCTCAA+CGG | + | chr4.1:23749491-23749510 | None:intergenic | 45.0% | |
| AAGACAGTAACCTACACTGG+GGG | + | chr4.1:23751122-23751141 | None:intergenic | 45.0% | |
| AAGGGAGGTTGCTGAATTCT+TGG | - | chr4.1:23750115-23750134 | MS.gene26447:intron | 45.0% | |
| AGAGAAATGGAAGGCAGGTT+AGG | - | chr4.1:23750568-23750587 | MS.gene26447:CDS | 45.0% | |
| CAAACATGTAAGCAGTTCCC+GGG | + | chr4.1:23750055-23750074 | None:intergenic | 45.0% | |
| CAAGGCAAAAGAGTAACAGC+AGG | + | chr4.1:23749703-23749722 | None:intergenic | 45.0% | |
| CAATGCAAACTCCGTTACAG+TGG | + | chr4.1:23752346-23752365 | None:intergenic | 45.0% | |
| CTGTTTGACCAGCTAGACTA+TGG | + | chr4.1:23750321-23750340 | None:intergenic | 45.0% | |
| GACTTAACAGCCCAAAACGT+TGG | + | chr4.1:23749993-23750012 | None:intergenic | 45.0% | |
| GCAAACATGTAAGCAGTTCC+CGG | + | chr4.1:23750056-23750075 | None:intergenic | 45.0% | |
| GCTTGGGAACCTGATCAATA+TGG | - | chr4.1:23750714-23750733 | MS.gene26447:intron | 45.0% | |
| GGAAGAAGGACTTTCTTTGG+AGG | + | chr4.1:23749385-23749404 | None:intergenic | 45.0% | |
| GGAAGCTTGTGGAAAAATGC+AGG | + | chr4.1:23749972-23749991 | None:intergenic | 45.0% | |
| GGCAAAGTGATCACTTGTGA+GGG | - | chr4.1:23752315-23752334 | MS.gene26447:CDS | 45.0% | |
| GGCTGTTAAGTCCAACATTC+AGG | - | chr4.1:23750001-23750020 | MS.gene26447:intron | 45.0% | |
| GTGGCTTCAAACATGAGAGT+TGG | + | chr4.1:23751645-23751664 | None:intergenic | 45.0% | |
| TAGCAACAAAGAACGATGGG+TGG | + | chr4.1:23751974-23751993 | None:intergenic | 45.0% | |
| TCTCTCAATCTTGCTGAACC+AGG | + | chr4.1:23749607-23749626 | None:intergenic | 45.0% | |
| TGGCAAAGTGATCACTTGTG+AGG | - | chr4.1:23752314-23752333 | MS.gene26447:CDS | 45.0% | |
| ! | AGAAGGACTTTCTTTGGAGG+GGG | + | chr4.1:23749382-23749401 | None:intergenic | 45.0% |
| ! | AGAGCAAGAAGTGTAGCAGA+AGG | - | chr4.1:23752396-23752415 | MS.gene26447:CDS | 45.0% |
| ! | CACTGTAACGGAGTTTGCAT+TGG | - | chr4.1:23752344-23752363 | MS.gene26447:CDS | 45.0% |
| ! | CCACAAGCTTCCAACGTTTT+GGG | - | chr4.1:23749980-23749999 | MS.gene26447:intron | 45.0% |
| ! | CCCGTTTGAAACCTGAATGT+TGG | + | chr4.1:23750015-23750034 | None:intergenic | 45.0% |
| ! | CTGCTGTTACTCTTTTGCCT+TGG | - | chr4.1:23749701-23749720 | MS.gene26447:intron | 45.0% |
| ! | GAAATCTGGATCCTGGGTTT+TGG | - | chr4.1:23750905-23750924 | MS.gene26447:intron | 45.0% |
| ! | GCTGTTACTCTTTTGCCTTG+GGG | - | chr4.1:23749703-23749722 | MS.gene26447:intron | 45.0% |
| ! | TCCACAAGCTTCCAACGTTT+TGG | - | chr4.1:23749979-23749998 | MS.gene26447:intron | 45.0% |
| !! | GAATGGAGAGAGTCTTGTTG+TGG | + | chr4.1:23749242-23749261 | None:intergenic | 45.0% |
| AATAGCAGGTGAGGAGCAGA+CGG | + | chr4.1:23752108-23752127 | None:intergenic | 50.0% | |
| ACCAGCTAGACTATGGCTTC+CGG | + | chr4.1:23750314-23750333 | None:intergenic | 50.0% | |
| ACTGGAGAGTTTACGAAGGG+TGG | - | chr4.1:23750388-23750407 | MS.gene26447:CDS | 50.0% | |
| AGACAGTAACCTACACTGGG+GGG | + | chr4.1:23751121-23751140 | None:intergenic | 50.0% | |
| AGATCCTCGTTGCAGAAGCA+TGG | + | chr4.1:23751174-23751193 | None:intergenic | 50.0% | |
| CAAGCTGCTGCATTTCTGTG+TGG | - | chr4.1:23751552-23751571 | MS.gene26447:CDS | 50.0% | |
| CCCAAAACGTTGGAAGCTTG+TGG | + | chr4.1:23749983-23750002 | None:intergenic | 50.0% | |
| CTTCAGAACCATGCGCGATT+GGG | + | chr4.1:23751228-23751247 | None:intergenic | 50.0% | |
| CTTGGAGTCTTGGCTTCTCA+AGG | - | chr4.1:23751325-23751344 | MS.gene26447:intron | 50.0% | |
| GAAATGGAGAGGGTGGAGTT+TGG | + | chr4.1:23749328-23749347 | None:intergenic | 50.0% | |
| GCAGCTACAACTTGAAGCTG+AGG | + | chr4.1:23749499-23749518 | None:intergenic | 50.0% | |
| GCTTGTGGAAAAATGCAGGG+TGG | + | chr4.1:23749968-23749987 | None:intergenic | 50.0% | |
| GTTCGAGAGAAATGGAAGGC+AGG | - | chr4.1:23750563-23750582 | MS.gene26447:CDS | 50.0% | |
| GTTTGGGGAGTCTGTTGCAA+GGG | - | chr4.1:23750097-23750116 | MS.gene26447:intron | 50.0% | |
| TACAGCTCATCCCTCTTCCA+TGG | - | chr4.1:23752245-23752264 | MS.gene26447:CDS | 50.0% | |
| TCTTCAGAACCATGCGCGAT+TGG | + | chr4.1:23751229-23751248 | None:intergenic | 50.0% | |
| TGAGGGACTTGCCACTGTAA+CGG | - | chr4.1:23752332-23752351 | MS.gene26447:CDS | 50.0% | |
| TGGAGAGGTGGAAATGGAGA+GGG | + | chr4.1:23749338-23749357 | None:intergenic | 50.0% | |
| TGTTTGGGGAGTCTGTTGCA+AGG | - | chr4.1:23750096-23750115 | MS.gene26447:intron | 50.0% | |
| TTGTCCATGCTTCTGCAACG+AGG | - | chr4.1:23751167-23751186 | MS.gene26447:intron | 50.0% | |
| ! | AAAGGGTGGGTGAGGGTTTT+AGG | + | chr4.1:23749288-23749307 | None:intergenic | 50.0% |
| ! | AAGGGTGGGTGAGGGTTTTA+GGG | + | chr4.1:23749287-23749306 | None:intergenic | 50.0% |
| ! | GAAGCTCGGAAGTACACTTG+CGG | - | chr4.1:23749823-23749842 | MS.gene26447:intron | 50.0% |
| ! | TTTAGGGTGAGAGTGGAGGT+GGG | + | chr4.1:23749271-23749290 | None:intergenic | 50.0% |
| ! | TTTGGAGGGGGTGCATTTGT+GGG | + | chr4.1:23749370-23749389 | None:intergenic | 50.0% |
| !! | CAGCTTCAAGTTGTAGCTGC+TGG | - | chr4.1:23749499-23749518 | MS.gene26447:CDS | 50.0% |
| !! | CTTCAAGTTGTAGCTGCTGG+AGG | - | chr4.1:23749502-23749521 | MS.gene26447:CDS | 50.0% |
| !! | GTCCTTCTTCCCATCGGTTT+CGG | - | chr4.1:23749394-23749413 | MS.gene26447:intron | 50.0% |
| !! | TGGAGAGAGTCTTGTTGTGG+CGG | + | chr4.1:23749239-23749258 | None:intergenic | 50.0% |
| !!! | TGAGGGTTTTAGGGTGAGAG+TGG | + | chr4.1:23749278-23749297 | None:intergenic | 50.0% |
| !!! | TTTTAGGGTGAGAGTGGAGG+TGG | + | chr4.1:23749272-23749291 | None:intergenic | 50.0% |
| ACCGGAAGCCATAGTCTAGC+TGG | - | chr4.1:23750310-23750329 | MS.gene26447:CDS | 55.0% | |
| ACCTTGGCTGAGCAGCTGTT+TGG | - | chr4.1:23750080-23750099 | MS.gene26447:intron | 55.0% | |
| AGAGGTGGAAATGGAGAGGG+TGG | + | chr4.1:23749335-23749354 | None:intergenic | 55.0% | |
| AGTAACCTACACTGGGGGGA+TGG | + | chr4.1:23751117-23751136 | None:intergenic | 55.0% | |
| AGTGGAGCGTGGAGGTGAAA+GGG | + | chr4.1:23749305-23749324 | None:intergenic | 55.0% | |
| CCTTGGCTGAGCAGCTGTTT+GGG | - | chr4.1:23750081-23750100 | MS.gene26447:intron | 55.0% | |
| CTGAGGCTCAACGGAAGCTA+CGG | + | chr4.1:23749482-23749501 | None:intergenic | 55.0% | |
| CTTGGCTGAGCAGCTGTTTG+GGG | - | chr4.1:23750082-23750101 | MS.gene26447:intron | 55.0% | |
| GCTTTACCTGGAGGAATGCC+TGG | - | chr4.1:23749586-23749605 | MS.gene26447:CDS | 55.0% | |
| GTGGAGAGGTGGAAATGGAG+AGG | + | chr4.1:23749339-23749358 | None:intergenic | 55.0% | |
| GTTCTCATCCCAATCGCGCA+TGG | - | chr4.1:23751217-23751236 | MS.gene26447:intron | 55.0% | |
| TGACATGAGCACCAGCACGA+CGG | + | chr4.1:23749459-23749478 | None:intergenic | 55.0% | |
| TGCCGAAACCGATGGGAAGA+AGG | + | chr4.1:23749399-23749418 | None:intergenic | 55.0% | |
| TTAGGGTGAGAGTGGAGGTG+GGG | + | chr4.1:23749270-23749289 | None:intergenic | 55.0% | |
| ! | AACGGGCTTACAACAAGCCG+TGG | - | chr4.1:23750029-23750048 | MS.gene26447:intron | 55.0% |
| ! | CTTTGGAGGGGGTGCATTTG+TGG | + | chr4.1:23749371-23749390 | None:intergenic | 55.0% |
| !! | AGAGAGTCTTGTTGTGGCGG+TGG | + | chr4.1:23749236-23749255 | None:intergenic | 55.0% |
| !! | AGTCTTGTTGTGGCGGTGGA+AGG | + | chr4.1:23749232-23749251 | None:intergenic | 55.0% |
| !! | TGGTGGTGGAGAGGTGGAAA+TGG | + | chr4.1:23749344-23749363 | None:intergenic | 55.0% |
| !!! | GGGTTTTAGGGTGAGAGTGG+AGG | + | chr4.1:23749275-23749294 | None:intergenic | 55.0% |
| AACCTACACTGGGGGGATGG+TGG | + | chr4.1:23751114-23751133 | None:intergenic | 60.0% | |
| CCCAAACAGCTGCTCAGCCA+AGG | + | chr4.1:23750084-23750103 | None:intergenic | 60.0% | |
| CTTACAACAAGCCGTGGCCC+GGG | - | chr4.1:23750035-23750054 | MS.gene26447:intron | 60.0% | |
| GAGCGTGGAGGTGAAAGGGT+GGG | + | chr4.1:23749301-23749320 | None:intergenic | 60.0% | |
| GAGGAACTGCTGGCGCTCAA+AGG | - | chr4.1:23752015-23752034 | MS.gene26447:CDS | 60.0% | |
| GAGTGGAGCGTGGAGGTGAA+AGG | + | chr4.1:23749306-23749325 | None:intergenic | 60.0% | |
| GCGCGATTGGGATGAGAACC+TGG | + | chr4.1:23751216-23751235 | None:intergenic | 60.0% | |
| GCTGAACCAGGCATTCCTCC+AGG | + | chr4.1:23749595-23749614 | None:intergenic | 60.0% | |
| GCTTACAACAAGCCGTGGCC+CGG | - | chr4.1:23750034-23750053 | MS.gene26447:intron | 60.0% | |
| GGAGAGGGTGGAGTTTGGAG+TGG | + | chr4.1:23749323-23749342 | None:intergenic | 60.0% | |
| GGAGGTGAAAGGGTGGGTGA+GGG | + | chr4.1:23749295-23749314 | None:intergenic | 60.0% | |
| GTGGAGGTGGGGATGGTGAA+TGG | + | chr4.1:23749259-23749278 | None:intergenic | 60.0% | |
| GTTGTGGCGGTGGAAGGTTG+AGG | + | chr4.1:23749226-23749245 | None:intergenic | 60.0% | |
| TGGAGGTGAAAGGGTGGGTG+AGG | + | chr4.1:23749296-23749315 | None:intergenic | 60.0% | |
| TGGGGAGTCTGTTGCAAGGG+AGG | - | chr4.1:23750100-23750119 | MS.gene26447:intron | 60.0% | |
| TGTAAGCAGTTCCCGGGCCA+CGG | + | chr4.1:23750049-23750068 | None:intergenic | 60.0% | |
| ! | CGGTTTCGGCACCGAGGAAA+TGG | - | chr4.1:23749408-23749427 | MS.gene26447:intron | 60.0% |
| ! | GAGTTTGGAGTGGAGCGTGG+AGG | + | chr4.1:23749313-23749332 | None:intergenic | 60.0% |
| ! | GCTCGGAAGTACACTTGCGG+TGG | - | chr4.1:23749826-23749845 | MS.gene26447:intron | 60.0% |
| ! | GGTGCATTTGTGGGTGGTGG+TGG | + | chr4.1:23749361-23749380 | None:intergenic | 60.0% |
| ! | GTGGAGTTTGGAGTGGAGCG+TGG | + | chr4.1:23749316-23749335 | None:intergenic | 60.0% |
| !! | GCATTTGTGGGTGGTGGTGG+TGG | + | chr4.1:23749358-23749377 | None:intergenic | 60.0% |
| !! | TCCTCGGTGCCGAAACCGAT+GGG | + | chr4.1:23749406-23749425 | None:intergenic | 60.0% |
| !! | TTCCTCGGTGCCGAAACCGA+TGG | + | chr4.1:23749407-23749426 | None:intergenic | 60.0% |
| ATCCACGTCCTCCGTCGTGC+TGG | - | chr4.1:23749445-23749464 | MS.gene26447:intron | 65.0% | |
| CATGAGCACCAGCACGACGG+AGG | + | chr4.1:23749456-23749475 | None:intergenic | 65.0% | |
| GGAGCGTGGAGGTGAAAGGG+TGG | + | chr4.1:23749302-23749321 | None:intergenic | 65.0% | |
| GGTGAGAGTGGAGGTGGGGA+TGG | + | chr4.1:23749266-23749285 | None:intergenic | 65.0% | |
| ! | GGAGGGGGTGCATTTGTGGG+TGG | + | chr4.1:23749367-23749386 | None:intergenic | 65.0% |
| ! | GGGGGTGCATTTGTGGGTGG+TGG | + | chr4.1:23749364-23749383 | None:intergenic | 65.0% |
| !! | TCCCATCGGTTTCGGCACCG+AGG | - | chr4.1:23749402-23749421 | MS.gene26447:intron | 65.0% |
| !! | TGTGGGTGGTGGTGGTGGAG+AGG | + | chr4.1:23749353-23749372 | None:intergenic | 65.0% |
| CACCAGCACGACGGAGGACG+TGG | + | chr4.1:23749450-23749469 | None:intergenic | 70.0% | |
| GGCCACCATCCCCCCAGTGT+AGG | - | chr4.1:23751109-23751128 | MS.gene26447:intron | 70.0% | |
| !! | GGGTGGTGGTGGTGGAGAGG+TGG | + | chr4.1:23749350-23749369 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 23749199 | 23752446 | 23749199 | ID=MS.gene26447 |
| chr4.1 | mRNA | 23749199 | 23752446 | 23749199 | ID=MS.gene26447.t1;Parent=MS.gene26447 |
| chr4.1 | exon | 23751901 | 23752446 | 23751901 | ID=MS.gene26447.t1.exon1;Parent=MS.gene26447.t1 |
| chr4.1 | CDS | 23751901 | 23752446 | 23751901 | ID=cds.MS.gene26447.t1;Parent=MS.gene26447.t1 |
| chr4.1 | exon | 23751509 | 23751688 | 23751509 | ID=MS.gene26447.t1.exon2;Parent=MS.gene26447.t1 |
| chr4.1 | CDS | 23751509 | 23751688 | 23751509 | ID=cds.MS.gene26447.t1;Parent=MS.gene26447.t1 |
| chr4.1 | exon | 23750519 | 23750599 | 23750519 | ID=MS.gene26447.t1.exon3;Parent=MS.gene26447.t1 |
| chr4.1 | CDS | 23750519 | 23750599 | 23750519 | ID=cds.MS.gene26447.t1;Parent=MS.gene26447.t1 |
| chr4.1 | exon | 23750228 | 23750428 | 23750228 | ID=MS.gene26447.t1.exon4;Parent=MS.gene26447.t1 |
| chr4.1 | CDS | 23750228 | 23750428 | 23750228 | ID=cds.MS.gene26447.t1;Parent=MS.gene26447.t1 |
| chr4.1 | exon | 23749494 | 23749631 | 23749494 | ID=MS.gene26447.t1.exon5;Parent=MS.gene26447.t1 |
| chr4.1 | CDS | 23749494 | 23749631 | 23749494 | ID=cds.MS.gene26447.t1;Parent=MS.gene26447.t1 |
| chr4.1 | exon | 23749199 | 23749411 | 23749199 | ID=MS.gene26447.t1.exon6;Parent=MS.gene26447.t1 |
| chr4.1 | CDS | 23749199 | 23749411 | 23749199 | ID=cds.MS.gene26447.t1;Parent=MS.gene26447.t1 |
| Gene Sequence |
| Protein sequence |
