Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26543.t1 | XP_003608033.1 | 94.2 | 360 | 21 | 0 | 1 | 360 | 1 | 360 | 9.30E-194 | 686 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26543.t1 | Q9C566 | 74.2 | 360 | 93 | 0 | 1 | 360 | 1 | 360 | 6.0e-157 | 555.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26543.t1 | G7JMH6 | 94.2 | 360 | 21 | 0 | 1 | 360 | 1 | 360 | 6.7e-194 | 686.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene26543 | MS.gene20783 | PPI |
MS.gene26543 | MS.gene60613 | PPI |
MS.gene26543 | MS.gene62607 | PPI |
MS.gene26543 | MS.gene061126 | PPI |
MS.gene26543 | MS.gene006231 | PPI |
MS.gene26543 | MS.gene07262 | PPI |
MS.gene26543 | MS.gene49154 | PPI |
MS.gene26543 | MS.gene30654 | PPI |
MS.gene26543 | MS.gene20834 | PPI |
MS.gene26543 | MS.gene040499 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26543.t1 | MTR_4g086760 | 97.230 | 361 | 10 | 0 | 1 | 361 | 1 | 361 | 0.0 | 727 |
MS.gene26543.t1 | MTR_4g086760 | 96.988 | 332 | 10 | 0 | 1 | 332 | 1 | 332 | 0.0 | 671 |
MS.gene26543.t1 | MTR_4g086760 | 95.223 | 314 | 15 | 0 | 1 | 314 | 1 | 314 | 0.0 | 625 |
MS.gene26543.t1 | MTR_8g079690 | 74.238 | 361 | 92 | 1 | 1 | 361 | 1 | 360 | 0.0 | 570 |
MS.gene26543.t1 | MTR_7g095750 | 63.905 | 169 | 58 | 3 | 6 | 173 | 9 | 175 | 6.97e-70 | 231 |
MS.gene26543.t1 | MTR_4g075290 | 58.286 | 175 | 67 | 3 | 1 | 173 | 1 | 171 | 3.34e-65 | 204 |
MS.gene26543.t1 | MTR_7g116340 | 59.538 | 173 | 68 | 2 | 1 | 173 | 1 | 171 | 5.37e-65 | 204 |
MS.gene26543.t1 | MTR_3g117750 | 58.382 | 173 | 66 | 3 | 5 | 175 | 13 | 181 | 3.16e-64 | 202 |
MS.gene26543.t1 | MTR_3g463900 | 57.895 | 171 | 68 | 3 | 5 | 174 | 35 | 202 | 3.68e-62 | 198 |
MS.gene26543.t1 | MTR_7g110980 | 55.556 | 171 | 68 | 1 | 4 | 174 | 96 | 258 | 1.66e-60 | 196 |
MS.gene26543.t1 | MTR_4g073650 | 56.571 | 175 | 75 | 1 | 5 | 179 | 47 | 220 | 3.77e-60 | 193 |
MS.gene26543.t1 | MTR_3g070500 | 57.059 | 170 | 69 | 3 | 5 | 173 | 65 | 231 | 1.40e-59 | 192 |
MS.gene26543.t1 | MTR_1g085560 | 56.395 | 172 | 66 | 2 | 4 | 174 | 85 | 248 | 2.29e-59 | 192 |
MS.gene26543.t1 | MTR_1g117010 | 54.335 | 173 | 68 | 2 | 5 | 174 | 78 | 242 | 9.59e-58 | 188 |
MS.gene26543.t1 | MTR_1g117010 | 54.335 | 173 | 68 | 2 | 5 | 174 | 78 | 242 | 9.59e-58 | 188 |
MS.gene26543.t1 | MTR_8g040180 | 55.357 | 168 | 71 | 2 | 7 | 173 | 21 | 185 | 1.08e-57 | 186 |
MS.gene26543.t1 | MTR_3g107660 | 50.820 | 183 | 87 | 2 | 6 | 188 | 12 | 191 | 8.02e-51 | 182 |
MS.gene26543.t1 | MTR_1g011980 | 52.096 | 167 | 78 | 2 | 6 | 172 | 9 | 173 | 3.64e-49 | 176 |
MS.gene26543.t1 | MTR_3g070500 | 58.871 | 124 | 50 | 1 | 5 | 128 | 65 | 187 | 1.53e-46 | 157 |
MS.gene26543.t1 | MTR_8g036015 | 48.344 | 151 | 65 | 3 | 18 | 167 | 10 | 148 | 7.43e-39 | 136 |
MS.gene26543.t1 | MTR_2g085075 | 48.701 | 154 | 66 | 3 | 18 | 170 | 471 | 612 | 1.33e-37 | 142 |
MS.gene26543.t1 | MTR_7g105220 | 47.368 | 152 | 67 | 4 | 18 | 168 | 19 | 158 | 3.10e-37 | 132 |
MS.gene26543.t1 | MTR_3g070500 | 58.333 | 96 | 39 | 1 | 5 | 100 | 65 | 159 | 1.75e-33 | 122 |
MS.gene26543.t1 | MTR_3g070500 | 57.000 | 100 | 42 | 1 | 5 | 104 | 65 | 163 | 2.70e-33 | 122 |
MS.gene26543.t1 | MTR_5g015500 | 43.791 | 153 | 73 | 4 | 17 | 168 | 313 | 453 | 2.32e-32 | 127 |
MS.gene26543.t1 | MTR_5g015500 | 43.791 | 153 | 73 | 4 | 17 | 168 | 353 | 493 | 3.18e-32 | 127 |
MS.gene26543.t1 | MTR_3g085705 | 45.833 | 96 | 48 | 2 | 56 | 151 | 24 | 115 | 9.51e-20 | 84.3 |
MS.gene26543.t1 | MTR_2g023120 | 35.870 | 184 | 95 | 6 | 18 | 190 | 22 | 193 | 1.06e-18 | 87.8 |
MS.gene26543.t1 | MTR_1g094065 | 36.129 | 155 | 80 | 7 | 17 | 170 | 88 | 224 | 1.35e-16 | 78.6 |
MS.gene26543.t1 | MTR_6g084140 | 30.189 | 159 | 90 | 4 | 18 | 167 | 27 | 173 | 1.81e-16 | 81.3 |
MS.gene26543.t1 | MTR_6g084140 | 30.189 | 159 | 90 | 4 | 18 | 167 | 10 | 156 | 1.95e-16 | 80.9 |
MS.gene26543.t1 | MTR_8g442420 | 29.560 | 159 | 91 | 4 | 18 | 167 | 10 | 156 | 2.83e-15 | 77.4 |
MS.gene26543.t1 | MTR_8g012340 | 33.566 | 143 | 92 | 2 | 219 | 361 | 409 | 548 | 1.15e-14 | 75.5 |
MS.gene26543.t1 | MTR_1g035360 | 32.468 | 154 | 88 | 4 | 17 | 170 | 87 | 224 | 1.92e-14 | 72.4 |
MS.gene26543.t1 | MTR_8g080980 | 30.435 | 161 | 103 | 3 | 207 | 361 | 387 | 544 | 7.63e-13 | 70.1 |
MS.gene26543.t1 | MTR_7g053470 | 33.113 | 151 | 84 | 5 | 219 | 362 | 401 | 541 | 2.73e-12 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26543.t1 | AT2G15790 | 77.500 | 360 | 81 | 0 | 1 | 360 | 1 | 360 | 0.0 | 593 |
MS.gene26543.t1 | AT3G63400 | 64.706 | 170 | 59 | 1 | 6 | 175 | 9 | 177 | 2.70e-73 | 233 |
MS.gene26543.t1 | AT3G63400 | 65.476 | 168 | 57 | 1 | 6 | 173 | 9 | 175 | 1.17e-71 | 233 |
MS.gene26543.t1 | AT3G63400 | 65.476 | 168 | 57 | 1 | 6 | 173 | 9 | 175 | 1.17e-71 | 233 |
MS.gene26543.t1 | AT3G63400 | 65.476 | 168 | 57 | 1 | 6 | 173 | 9 | 175 | 1.17e-71 | 233 |
MS.gene26543.t1 | AT2G21130 | 60.947 | 169 | 64 | 2 | 5 | 173 | 6 | 172 | 1.82e-67 | 210 |
MS.gene26543.t1 | AT4G38740 | 58.960 | 173 | 69 | 2 | 1 | 173 | 1 | 171 | 8.36e-67 | 209 |
MS.gene26543.t1 | AT3G56070 | 60.116 | 173 | 67 | 2 | 1 | 173 | 1 | 171 | 2.22e-66 | 207 |
MS.gene26543.t1 | AT3G56070 | 60.116 | 173 | 67 | 2 | 1 | 173 | 1 | 171 | 2.22e-66 | 207 |
MS.gene26543.t1 | AT4G34870 | 59.538 | 173 | 68 | 2 | 1 | 173 | 1 | 171 | 2.17e-65 | 205 |
MS.gene26543.t1 | AT2G16600 | 59.649 | 171 | 63 | 3 | 5 | 173 | 6 | 172 | 2.27e-65 | 205 |
MS.gene26543.t1 | AT3G55920 | 60.000 | 170 | 64 | 3 | 5 | 173 | 60 | 226 | 2.63e-63 | 202 |
MS.gene26543.t1 | AT3G62030 | 56.471 | 170 | 66 | 1 | 5 | 174 | 96 | 257 | 2.99e-61 | 197 |
MS.gene26543.t1 | AT3G62030 | 56.471 | 170 | 66 | 1 | 5 | 174 | 95 | 256 | 3.37e-61 | 197 |
MS.gene26543.t1 | AT2G29960 | 57.310 | 171 | 69 | 3 | 5 | 174 | 33 | 200 | 4.98e-61 | 195 |
MS.gene26543.t1 | AT2G29960 | 57.310 | 171 | 69 | 3 | 5 | 174 | 33 | 200 | 4.98e-61 | 195 |
MS.gene26543.t1 | AT5G13120 | 54.545 | 176 | 69 | 2 | 5 | 177 | 91 | 258 | 5.19e-61 | 197 |
MS.gene26543.t1 | AT5G13120 | 54.545 | 176 | 69 | 2 | 5 | 177 | 87 | 254 | 6.49e-61 | 196 |
MS.gene26543.t1 | AT3G62030 | 56.471 | 170 | 66 | 1 | 5 | 174 | 149 | 310 | 1.09e-60 | 198 |
MS.gene26543.t1 | AT5G58710 | 57.310 | 171 | 69 | 3 | 5 | 174 | 36 | 203 | 6.34e-60 | 192 |
MS.gene26543.t1 | AT4G34960 | 54.971 | 171 | 76 | 1 | 5 | 175 | 48 | 217 | 8.86e-59 | 190 |
MS.gene26543.t1 | AT2G29960 | 54.971 | 171 | 63 | 4 | 5 | 174 | 33 | 190 | 8.29e-56 | 181 |
MS.gene26543.t1 | AT2G38730 | 54.167 | 168 | 73 | 2 | 7 | 173 | 35 | 199 | 2.58e-53 | 175 |
MS.gene26543.t1 | AT2G16600 | 52.632 | 171 | 53 | 3 | 5 | 173 | 6 | 150 | 1.32e-51 | 169 |
MS.gene26543.t1 | AT4G34960 | 58.065 | 124 | 51 | 1 | 5 | 128 | 48 | 170 | 3.40e-46 | 155 |
MS.gene26543.t1 | AT4G32420 | 48.810 | 168 | 83 | 2 | 6 | 172 | 9 | 174 | 4.36e-46 | 168 |
MS.gene26543.t1 | AT4G32420 | 48.810 | 168 | 83 | 2 | 6 | 172 | 9 | 174 | 4.36e-46 | 168 |
MS.gene26543.t1 | AT4G32420 | 48.810 | 168 | 83 | 2 | 6 | 172 | 9 | 174 | 4.36e-46 | 168 |
MS.gene26543.t1 | AT4G32420 | 48.810 | 168 | 83 | 2 | 6 | 172 | 9 | 174 | 4.36e-46 | 168 |
MS.gene26543.t1 | AT4G32420 | 48.052 | 154 | 78 | 1 | 6 | 159 | 9 | 160 | 4.82e-41 | 154 |
MS.gene26543.t1 | AT1G01940 | 47.020 | 151 | 67 | 3 | 18 | 167 | 10 | 148 | 1.80e-38 | 135 |
MS.gene26543.t1 | AT3G44600 | 50.000 | 154 | 64 | 3 | 18 | 170 | 485 | 626 | 1.90e-38 | 145 |
MS.gene26543.t1 | AT2G36130 | 48.026 | 152 | 66 | 4 | 18 | 168 | 19 | 158 | 2.04e-37 | 132 |
MS.gene26543.t1 | AT3G22920 | 43.182 | 176 | 88 | 6 | 1 | 173 | 1 | 167 | 1.94e-33 | 124 |
MS.gene26543.t1 | AT5G67530 | 41.139 | 158 | 80 | 4 | 14 | 170 | 349 | 494 | 6.25e-33 | 129 |
MS.gene26543.t1 | AT4G33060 | 37.838 | 148 | 77 | 5 | 18 | 162 | 22 | 157 | 3.78e-22 | 97.8 |
MS.gene26543.t1 | AT1G53720 | 29.560 | 159 | 91 | 4 | 18 | 167 | 10 | 156 | 1.11e-17 | 83.6 |
MS.gene26543.t1 | AT1G53720 | 29.560 | 159 | 91 | 4 | 18 | 167 | 10 | 156 | 1.17e-16 | 81.6 |
MS.gene26543.t1 | AT3G25230 | 29.714 | 175 | 113 | 2 | 194 | 361 | 375 | 546 | 1.42e-14 | 75.5 |
MS.gene26543.t1 | AT3G25230 | 29.714 | 175 | 113 | 2 | 194 | 361 | 375 | 546 | 1.51e-14 | 75.1 |
MS.gene26543.t1 | AT2G47320 | 29.221 | 154 | 94 | 4 | 17 | 170 | 86 | 224 | 3.61e-13 | 68.9 |
MS.gene26543.t1 | AT5G48570 | 29.371 | 143 | 98 | 1 | 219 | 361 | 417 | 556 | 2.51e-12 | 68.6 |
MS.gene26543.t1 | AT1G58450 | 33.333 | 156 | 78 | 7 | 219 | 363 | 17 | 157 | 5.11e-11 | 61.2 |
Find 82 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTTTCATCGTATTGTTAA+AGG | 0.122276 | 4.1:+23125233 | MS.gene26543:CDS |
GATGGTAAGCATGTTGTATT+TGG | 0.164027 | 4.1:+23125446 | MS.gene26543:CDS |
CAGGCTTGTAAATTGAAAAT+AGG | 0.228821 | 4.1:+23126172 | MS.gene26543:intron |
GTTGACTCAATCAAAGCTTT+TGG | 0.281914 | 4.1:+23125689 | MS.gene26543:CDS |
AAAGGCATTGCTCCCAATAC+TGG | 0.290483 | 4.1:+23123837 | MS.gene26543:CDS |
GCTTTATGTACTGGTGAAAA+AGG | 0.323112 | 4.1:+23123819 | MS.gene26543:CDS |
GTATTTGGGAAAGTAGTTAA+AGG | 0.327975 | 4.1:+23125461 | MS.gene26543:CDS |
AACTGAGAACCATTTGTATT+AGG | 0.329429 | 4.1:-23125392 | None:intergenic |
AAGATTACAAAATGGCTCTA+AGG | 0.372932 | 4.1:+23125820 | MS.gene26543:CDS |
ATGCCATCATCTTCTCCTTC+GGG | 0.380950 | 4.1:-23125575 | None:intergenic |
GGGTTTGCAGAGAAAAGTTC+AGG | 0.381476 | 4.1:+23126011 | MS.gene26543:intron |
TATGCCATCATCTTCTCCTT+CGG | 0.385372 | 4.1:-23125576 | None:intergenic |
ACTGGAGGAGAATCTATATA+TGG | 0.394055 | 4.1:+23125296 | MS.gene26543:CDS |
GGCAAGGTCTGCAGGCCAAT+CGG | 0.395413 | 4.1:-23125630 | None:intergenic |
CCTTCTCCCAACAAATATCT+AGG | 0.395609 | 4.1:-23125866 | None:intergenic |
TACGTTACCTAGATATTTGT+TGG | 0.398707 | 4.1:+23125859 | MS.gene26543:CDS |
TTGAAAATAGGAGATGTTAA+AGG | 0.404212 | 4.1:+23126184 | MS.gene26543:CDS |
CATAACAACTAACCATCATT+TGG | 0.407057 | 4.1:-23126485 | None:intergenic |
ACAGAAACAAGATTACAAAA+TGG | 0.408202 | 4.1:+23125812 | MS.gene26543:intron |
TGGAGGGGTACCCCAGTATT+GGG | 0.413728 | 4.1:-23123849 | None:intergenic |
GGGATCTCGGCAAGGTCTGC+AGG | 0.419859 | 4.1:-23125638 | None:intergenic |
GTTTGTTGCAGATATCTGAT+AGG | 0.423253 | 4.1:+23126880 | MS.gene26543:intron |
AGATGCACTCACCTTCTTCC+TGG | 0.426622 | 4.1:-23126804 | None:intergenic |
AATTTCAGAGCTTTATGTAC+TGG | 0.442340 | 4.1:+23123810 | MS.gene26543:CDS |
AACAGGACGGTCTTCGTCTC+CGG | 0.443387 | 4.1:-23125519 | None:intergenic |
ATGGTAAGCATGTTGTATTT+GGG | 0.444699 | 4.1:+23125447 | MS.gene26543:CDS |
CTTTAAGAAGGCACTGACCT+TGG | 0.457066 | 4.1:+23126460 | MS.gene26543:CDS |
ACACGAACTGCTCATCTAGA+TGG | 0.458834 | 4.1:+23125428 | MS.gene26543:CDS |
TCCATTTCACTAGGCATACA+TGG | 0.468241 | 4.1:+23126406 | MS.gene26543:intron |
ATGGAGGGGTACCCCAGTAT+TGG | 0.470580 | 4.1:-23123850 | None:intergenic |
CAACCACCAGTCAAGTTCAC+TGG | 0.471787 | 4.1:-23125660 | None:intergenic |
ATATCTGCTGGAGATGGTAC+TGG | 0.476194 | 4.1:+23125278 | MS.gene26543:CDS |
AGCTTTGTTTCGCCAAGGAC+AGG | 0.477436 | 4.1:+23126258 | MS.gene26543:CDS |
GTCAAGTTCACTGGGGATCT+CGG | 0.478450 | 4.1:-23125651 | None:intergenic |
GTTAAAGGCGCTATGATTGA+AGG | 0.480916 | 4.1:+23125248 | MS.gene26543:CDS |
ACGTTACCTAGATATTTGTT+GGG | 0.481777 | 4.1:+23125860 | MS.gene26543:CDS |
GGGAAAGTAGTTAAAGGAAT+GGG | 0.490146 | 4.1:+23125467 | MS.gene26543:CDS |
TCAATTGAGCACGTTGCGAC+CGG | 0.496798 | 4.1:+23125500 | MS.gene26543:CDS |
AAATGAAGCATGAAAGGAAA+GGG | 0.497023 | 4.1:+23125345 | MS.gene26543:CDS |
CCTAGATATTTGTTGGGAGA+AGG | 0.500762 | 4.1:+23125866 | MS.gene26543:CDS |
AAGGCATTGCTCCCAATACT+GGG | 0.502453 | 4.1:+23123838 | MS.gene26543:CDS |
GCAAGGTCTGCAGGCCAATC+GGG | 0.505929 | 4.1:-23125629 | None:intergenic |
AGAACTAGAAGGACGAATAT+TGG | 0.506131 | 4.1:+23123749 | MS.gene26543:CDS |
TGCAGTTGAAAGCTTTAAGA+AGG | 0.510440 | 4.1:+23126448 | MS.gene26543:CDS |
TGTTGTTGATGTTAAAATTG+TGG | 0.512036 | 4.1:+23125538 | MS.gene26543:CDS |
ACTAGCTGCGGCCAGGAAGA+AGG | 0.516262 | 4.1:+23126793 | MS.gene26543:CDS |
AACACCGGTCCTAATACAAA+TGG | 0.522911 | 4.1:+23125383 | MS.gene26543:CDS |
TAGCCATACCAACCTGTCCT+TGG | 0.523129 | 4.1:-23126270 | None:intergenic |
AAAAGGAACTAGCTGCGGCC+AGG | 0.525433 | 4.1:+23126786 | MS.gene26543:CDS |
ATATTTGTTGGGAGAAGGAA+GGG | 0.525523 | 4.1:+23125871 | MS.gene26543:CDS |
TGGGAAAGTAGTTAAAGGAA+TGG | 0.530752 | 4.1:+23125466 | MS.gene26543:CDS |
AGCATAGGTGAAGAACTAGA+AGG | 0.535250 | 4.1:+23123738 | MS.gene26543:CDS |
AACCACCAGTCAAGTTCACT+GGG | 0.537285 | 4.1:-23125659 | None:intergenic |
GAAGGAGGTGATATATCTGC+TGG | 0.541862 | 4.1:+23125266 | MS.gene26543:CDS |
CTAACCATCATTTGGCTCCA+AGG | 0.542156 | 4.1:-23126477 | None:intergenic |
AGAGAGTACCTTAAAATGGA+GGG | 0.554528 | 4.1:-23123865 | None:intergenic |
CTGACCTTGGAGCCAAATGA+TGG | 0.557339 | 4.1:+23126473 | MS.gene26543:CDS |
AGATCCCCAGTGAACTTGAC+TGG | 0.557403 | 4.1:+23125654 | MS.gene26543:CDS |
GAAATGAAGCATGAAAGGAA+AGG | 0.564179 | 4.1:+23125344 | MS.gene26543:CDS |
GCAAAAGCTTTGTTTCGCCA+AGG | 0.564247 | 4.1:+23126253 | MS.gene26543:CDS |
GATATTTGTTGGGAGAAGGA+AGG | 0.565739 | 4.1:+23125870 | MS.gene26543:CDS |
GAGAAGGAAGGGATTGATGA+AGG | 0.568956 | 4.1:+23125882 | MS.gene26543:CDS |
AAGGAAAGGGATGCTATCAA+TGG | 0.570871 | 4.1:+23125358 | MS.gene26543:CDS |
AGAACCATTTGTATTAGGAC+CGG | 0.574306 | 4.1:-23125387 | None:intergenic |
GGTGATATATCTGCTGGAGA+TGG | 0.574675 | 4.1:+23125272 | MS.gene26543:CDS |
AAGAGAGTACCTTAAAATGG+AGG | 0.574768 | 4.1:-23123866 | None:intergenic |
GGCTCTAAGGAAGTATCGAA+AGG | 0.578118 | 4.1:+23125833 | MS.gene26543:CDS |
ATGGTGATACTTATCCCGAT+TGG | 0.587040 | 4.1:+23125615 | MS.gene26543:CDS |
GATGTTAAAATTGTGGATTG+TGG | 0.596237 | 4.1:+23125545 | MS.gene26543:CDS |
ATTCCCGAAGGAGAAGATGA+TGG | 0.607865 | 4.1:+23125572 | MS.gene26543:CDS |
GTTCACTGGGGATCTCGGCA+AGG | 0.615156 | 4.1:-23125646 | None:intergenic |
TCGCAACGTGCTCAATTGAA+CGG | 0.615313 | 4.1:-23125496 | None:intergenic |
ACAGAATTTGCAATGCGTGA+AGG | 0.618981 | 4.1:+23126220 | MS.gene26543:CDS |
TGCTTCTTAGACATTAGCAT+AGG | 0.626297 | 4.1:+23123723 | MS.gene26543:CDS |
TCTGCTGGAGATGGTACTGG+AGG | 0.662046 | 4.1:+23125281 | MS.gene26543:CDS |
GAGAGTACCTTAAAATGGAG+GGG | 0.666958 | 4.1:-23123864 | None:intergenic |
ATGCTATCAATGGCAAACAC+CGG | 0.676783 | 4.1:+23125368 | MS.gene26543:CDS |
AAAGGCGCTATGATTGAAGG+AGG | 0.683125 | 4.1:+23125251 | MS.gene26543:CDS |
TCCCCAGTGAACTTGACTGG+TGG | 0.698905 | 4.1:+23125657 | MS.gene26543:CDS |
GATTGTGGAGAAATTCCCGA+AGG | 0.703557 | 4.1:+23125560 | MS.gene26543:CDS |
AGGCATTGCTCCCAATACTG+GGG | 0.727328 | 4.1:+23123839 | MS.gene26543:CDS |
ACCACCAGTCAAGTTCACTG+GGG | 0.804679 | 4.1:-23125658 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGTAACATAATTTATATAA+TGG | - | chr4.1:23124919-23124938 | None:intergenic | 10.0% |
!! | TTAAAAATAAAGATATGAAA+CGG | - | chr4.1:23124840-23124859 | None:intergenic | 10.0% |
!! | TTGATTATATTAATTAGTAA+AGG | - | chr4.1:23124178-23124197 | None:intergenic | 10.0% |
!!! | TTTATATATATTTTGTTTGA+TGG | - | chr4.1:23124981-23125000 | None:intergenic | 10.0% |
!! | AAATGATGTAATCTAAAAAT+TGG | + | chr4.1:23126672-23126691 | MS.gene26543:intron | 15.0% |
!! | TAAAAATAAAGATATGAAAC+GGG | - | chr4.1:23124839-23124858 | None:intergenic | 15.0% |
!! | TAAACATTTAATTCATATCT+CGG | - | chr4.1:23125776-23125795 | None:intergenic | 15.0% |
!! | TATTGTAACTCAAATATATT+TGG | + | chr4.1:23125012-23125031 | MS.gene26543:intron | 15.0% |
!!! | AAAAGTATATACTTTTGATA+TGG | + | chr4.1:23124663-23124682 | MS.gene26543:intron | 15.0% |
!!! | AATTTTTAGATTACATCATT+TGG | - | chr4.1:23126673-23126692 | None:intergenic | 15.0% |
!!! | TACTGATTTTATTTTTTTAC+AGG | + | chr4.1:23126153-23126172 | MS.gene26543:intron | 15.0% |
!!! | TTTGTTGTAATCTAAAAAAA+GGG | + | chr4.1:23124014-23124033 | MS.gene26543:intron | 15.0% |
!! | AATCATCAAAGAATGAATAA+AGG | - | chr4.1:23124344-23124363 | None:intergenic | 20.0% |
!! | AATTGAATAAAAAACGATGA+TGG | - | chr4.1:23123904-23123923 | None:intergenic | 20.0% |
!! | ACAAATGTTAGATATTTATG+TGG | + | chr4.1:23124799-23124818 | MS.gene26543:intron | 20.0% |
!! | ACTGTTCAGATAAATTTAAA+GGG | + | chr4.1:23126096-23126115 | MS.gene26543:intron | 20.0% |
!! | ATTGAATAAAAAACGATGAT+GGG | - | chr4.1:23123903-23123922 | None:intergenic | 20.0% |
!! | TAGAGCTAATTTCATATATT+AGG | - | chr4.1:23125746-23125765 | None:intergenic | 20.0% |
!! | TCTAAAAGTTTCTTCTTTAT+TGG | + | chr4.1:23124117-23124136 | MS.gene26543:intron | 20.0% |
!! | TGTTACTATATATCTATACA+TGG | + | chr4.1:23124931-23124950 | MS.gene26543:intron | 20.0% |
!!! | AATTTTTATGCACTTGTATA+TGG | + | chr4.1:23126712-23126731 | MS.gene26543:intron | 20.0% |
!!! | ACATTTAGGATATATTTACA+AGG | + | chr4.1:23124640-23124659 | MS.gene26543:intron | 20.0% |
!!! | ATAACAAACTTTTTCAAAGA+TGG | + | chr4.1:23125596-23125615 | MS.gene26543:CDS | 20.0% |
!!! | ATGATAAGTAGGTTTATTTT+TGG | + | chr4.1:23125990-23126009 | MS.gene26543:intron | 20.0% |
!!! | CTTTGTTGTAATCTAAAAAA+AGG | + | chr4.1:23124013-23124032 | MS.gene26543:intron | 20.0% |
!!! | GCTAATTTAAAAGTTTTGAT+TGG | + | chr4.1:23124208-23124227 | MS.gene26543:intron | 20.0% |
!!! | TCTTTAGAAAAAACACAATA+TGG | - | chr4.1:23125121-23125140 | None:intergenic | 20.0% |
!!! | TGATAAGTAGGTTTATTTTT+GGG | + | chr4.1:23125991-23126010 | MS.gene26543:intron | 20.0% |
!!! | TTGTTATGAACATACTATTT+TGG | + | chr4.1:23126500-23126519 | MS.gene26543:intron | 20.0% |
! | AAAAGTTTCTTCTTTATTGG+TGG | + | chr4.1:23124120-23124139 | MS.gene26543:intron | 25.0% |
! | AATCAAAACAGAACAAACAA+AGG | - | chr4.1:23123961-23123980 | None:intergenic | 25.0% |
! | ACAGAAACAAGATTACAAAA+TGG | + | chr4.1:23125812-23125831 | MS.gene26543:intron | 25.0% |
! | ACAGCAATCAAAAGAATAAA+GGG | - | chr4.1:23124083-23124102 | None:intergenic | 25.0% |
! | ACATCAAAGTCAGTTAATAT+AGG | - | chr4.1:23126124-23126143 | None:intergenic | 25.0% |
! | ATCAGAGAAAAAAAAAAAGC+AGG | - | chr4.1:23126374-23126393 | None:intergenic | 25.0% |
! | ATGTTTAGCTGGAATAAAAA+AGG | + | chr4.1:23126769-23126788 | MS.gene26543:intron | 25.0% |
! | ATTGACATTTGAGCTAATAT+AGG | - | chr4.1:23125171-23125190 | None:intergenic | 25.0% |
! | CAACAAAATGTTATAAGGTT+CGG | - | chr4.1:23126747-23126766 | None:intergenic | 25.0% |
! | CACTGTTCAGATAAATTTAA+AGG | + | chr4.1:23126095-23126114 | MS.gene26543:intron | 25.0% |
! | CATTGCAACAAAATGTTATA+AGG | - | chr4.1:23126752-23126771 | None:intergenic | 25.0% |
! | GTGAAATAAATAGTAGCAAA+AGG | - | chr4.1:23125915-23125934 | None:intergenic | 25.0% |
! | TGTTGTTGATGTTAAAATTG+TGG | + | chr4.1:23125538-23125557 | MS.gene26543:CDS | 25.0% |
! | TTCATATCATGAACAAACTT+AGG | - | chr4.1:23125096-23125115 | None:intergenic | 25.0% |
! | TTGAAAATAGGAGATGTTAA+AGG | + | chr4.1:23126184-23126203 | MS.gene26543:CDS | 25.0% |
!! | AAAGGGAATAATCATCTTTT+CGG | - | chr4.1:23124066-23124085 | None:intergenic | 25.0% |
!! | ATTCATTCTTTGATGATTCA+AGG | + | chr4.1:23124346-23124365 | MS.gene26543:intron | 25.0% |
!!! | AAAAAGAGAGTACCTTAAAA+TGG | - | chr4.1:23123872-23123891 | None:intergenic | 25.0% |
!!! | AAAGTTTTGATTGGTACATT+TGG | + | chr4.1:23124217-23124236 | MS.gene26543:intron | 25.0% |
!!! | AAGTTTTGATTGGTACATTT+GGG | + | chr4.1:23124218-23124237 | MS.gene26543:intron | 25.0% |
!!! | ACAATTTTAACATCAACAAC+AGG | - | chr4.1:23125539-23125558 | None:intergenic | 25.0% |
!!! | ATATGCTGTTGTTATTTTCA+GGG | + | chr4.1:23125206-23125225 | MS.gene26543:intron | 25.0% |
!!! | ATTTTGAAATGAAGCATGAA+AGG | + | chr4.1:23125339-23125358 | MS.gene26543:CDS | 25.0% |
!!! | TATATGCTGTTGTTATTTTC+AGG | + | chr4.1:23125205-23125224 | MS.gene26543:intron | 25.0% |
AAAAGGGTTGAACTTGAATT+TGG | + | chr4.1:23124030-23124049 | MS.gene26543:intron | 30.0% | |
AAATGAAGCATGAAAGGAAA+GGG | + | chr4.1:23125345-23125364 | MS.gene26543:CDS | 30.0% | |
AACTGAGAACCATTTGTATT+AGG | - | chr4.1:23125395-23125414 | None:intergenic | 30.0% | |
AAGCATTATGTATACTTCTC+TGG | + | chr4.1:23126842-23126861 | MS.gene26543:intron | 30.0% | |
AATAAAAAAGGAACTAGCTG+CGG | + | chr4.1:23126781-23126800 | MS.gene26543:CDS | 30.0% | |
ACGTTACCTAGATATTTGTT+GGG | + | chr4.1:23125860-23125879 | MS.gene26543:CDS | 30.0% | |
ATGGTAAGCATGTTGTATTT+GGG | + | chr4.1:23125447-23125466 | MS.gene26543:CDS | 30.0% | |
CACAGCAATCAAAAGAATAA+AGG | - | chr4.1:23124084-23124103 | None:intergenic | 30.0% | |
CAGGCTTGTAAATTGAAAAT+AGG | + | chr4.1:23126172-23126191 | MS.gene26543:intron | 30.0% | |
CATAACAACTAACCATCATT+TGG | - | chr4.1:23126488-23126507 | None:intergenic | 30.0% | |
CATGAACAAACTTAGGAATT+TGG | - | chr4.1:23125089-23125108 | None:intergenic | 30.0% | |
CGAAAAAAAGAGTCTTTGAT+AGG | - | chr4.1:23123938-23123957 | None:intergenic | 30.0% | |
GAAGATGGAATCGTTAAAAT+TGG | + | chr4.1:23124512-23124531 | MS.gene26543:intron | 30.0% | |
GTAAACGATACATTTGATGA+TGG | + | chr4.1:23124403-23124422 | MS.gene26543:intron | 30.0% | |
GTATTTGGGAAAGTAGTTAA+AGG | + | chr4.1:23125461-23125480 | MS.gene26543:CDS | 30.0% | |
TACGTTACCTAGATATTTGT+TGG | + | chr4.1:23125859-23125878 | MS.gene26543:CDS | 30.0% | |
TATCTTACTTCCATTTCACT+AGG | + | chr4.1:23126397-23126416 | MS.gene26543:intron | 30.0% | |
TGCTTTCATCGTATTGTTAA+AGG | + | chr4.1:23125233-23125252 | MS.gene26543:CDS | 30.0% | |
TGGATGATAGAATGAGAAAT+GGG | + | chr4.1:23124490-23124509 | MS.gene26543:intron | 30.0% | |
TTAGCTCAAATGTCAATCAT+TGG | + | chr4.1:23125174-23125193 | MS.gene26543:intron | 30.0% | |
TTGGGGAAAAAAACACATTT+AGG | + | chr4.1:23124626-23124645 | MS.gene26543:intron | 30.0% | |
! | AAGATTACAAAATGGCTCTA+AGG | + | chr4.1:23125820-23125839 | MS.gene26543:CDS | 30.0% |
! | AATCATCTTTTCGGAATTGA+TGG | - | chr4.1:23124057-23124076 | None:intergenic | 30.0% |
! | AATTTCAGAGCTTTATGTAC+TGG | + | chr4.1:23123810-23123829 | MS.gene26543:CDS | 30.0% |
! | ACAAAGCTTTTGCATTGTTA+TGG | - | chr4.1:23126246-23126265 | None:intergenic | 30.0% |
! | ATTTTGTTGCAATGTTTAGC+TGG | + | chr4.1:23126758-23126777 | MS.gene26543:intron | 30.0% |
! | CTGAAATTTTCAGCAGTTTT+GGG | - | chr4.1:23123798-23123817 | None:intergenic | 30.0% |
! | GATGTTAAAATTGTGGATTG+TGG | + | chr4.1:23125545-23125564 | MS.gene26543:CDS | 30.0% |
! | TTTTAACATCAACAACAGGA+CGG | - | chr4.1:23125535-23125554 | None:intergenic | 30.0% |
!! | AAGAGCTTTGAATCATCATA+TGG | + | chr4.1:23126296-23126315 | MS.gene26543:intron | 30.0% |
!! | ACATTTTGACATTCATTGGT+TGG | + | chr4.1:23124607-23124626 | MS.gene26543:intron | 30.0% |
!! | ATTTTGACATTCATTGGTTG+GGG | + | chr4.1:23124609-23124628 | MS.gene26543:intron | 30.0% |
!! | CATTTTGACATTCATTGGTT+GGG | + | chr4.1:23124608-23124627 | MS.gene26543:intron | 30.0% |
!! | TATTTTGGATCAAACCTTTG+CGG | + | chr4.1:23126515-23126534 | MS.gene26543:intron | 30.0% |
!! | TCTGAAATTTTCAGCAGTTT+TGG | - | chr4.1:23123799-23123818 | None:intergenic | 30.0% |
!! | TGTGACATTTTGACATTCAT+TGG | + | chr4.1:23124603-23124622 | MS.gene26543:intron | 30.0% |
!! | TTTGTAATCTTGTTTCTGTC+AGG | - | chr4.1:23125811-23125830 | None:intergenic | 30.0% |
AACCTACTTATCATGTGCAA+AGG | - | chr4.1:23125984-23126003 | None:intergenic | 35.0% | |
ACAAGTTTGCGAGATATTAG+TGG | + | chr4.1:23124376-23124395 | MS.gene26543:intron | 35.0% | |
ACTGGAGGAGAATCTATATA+TGG | + | chr4.1:23125296-23125315 | MS.gene26543:CDS | 35.0% | |
AGAACCATTTGTATTAGGAC+CGG | - | chr4.1:23125390-23125409 | None:intergenic | 35.0% | |
AGAACTAGAAGGACGAATAT+TGG | + | chr4.1:23123749-23123768 | MS.gene26543:CDS | 35.0% | |
ATCCTTTGCACATGATAAGT+AGG | + | chr4.1:23125979-23125998 | MS.gene26543:intron | 35.0% | |
CAATTAGACAGAAGCTATGT+TGG | + | chr4.1:23124465-23124484 | MS.gene26543:intron | 35.0% | |
GAAATGAAGCATGAAAGGAA+AGG | + | chr4.1:23125344-23125363 | MS.gene26543:CDS | 35.0% | |
GATGGTAAGCATGTTGTATT+TGG | + | chr4.1:23125446-23125465 | MS.gene26543:CDS | 35.0% | |
GGGAAAGTAGTTAAAGGAAT+GGG | + | chr4.1:23125467-23125486 | MS.gene26543:CDS | 35.0% | |
GTAAGCAATTGACATAGTCA+AGG | + | chr4.1:23124552-23124571 | MS.gene26543:intron | 35.0% | |
GTGGATGATAGAATGAGAAA+TGG | + | chr4.1:23124489-23124508 | MS.gene26543:intron | 35.0% | |
TAGAAGCCTGACATAGTAAA+GGG | - | chr4.1:23126331-23126350 | None:intergenic | 35.0% | |
TAGAATGAGAAATGGGAAGA+TGG | + | chr4.1:23124497-23124516 | MS.gene26543:intron | 35.0% | |
TGCTCATAACATGAAGAACA+AGG | - | chr4.1:23124304-23124323 | None:intergenic | 35.0% | |
TGCTTCTTAGACATTAGCAT+AGG | + | chr4.1:23123723-23123742 | MS.gene26543:CDS | 35.0% | |
TGGGAAAGTAGTTAAAGGAA+TGG | + | chr4.1:23125466-23125485 | MS.gene26543:CDS | 35.0% | |
TTACAAACAGCTCAGTAAGT+TGG | + | chr4.1:23126060-23126079 | MS.gene26543:intron | 35.0% | |
! | ATATTTGTTGGGAGAAGGAA+GGG | + | chr4.1:23125871-23125890 | MS.gene26543:CDS | 35.0% |
! | GCTTTATGTACTGGTGAAAA+AGG | + | chr4.1:23123819-23123838 | MS.gene26543:CDS | 35.0% |
! | GGATACCTTTTGGATACTTT+GGG | + | chr4.1:23124239-23124258 | MS.gene26543:intron | 35.0% |
! | GTTTGTTGCAGATATCTGAT+AGG | + | chr4.1:23126880-23126899 | MS.gene26543:intron | 35.0% |
! | TGTATCCCAAAGTATCCAAA+AGG | - | chr4.1:23124247-23124266 | None:intergenic | 35.0% |
! | TTTTGGCAATGAGTGTTACA+AGG | + | chr4.1:23125706-23125725 | MS.gene26543:CDS | 35.0% |
!! | AACGATACATTTGATGATGG+CGG | + | chr4.1:23124406-23124425 | MS.gene26543:intron | 35.0% |
!! | AAGAGAGTACCTTAAAATGG+AGG | - | chr4.1:23123869-23123888 | None:intergenic | 35.0% |
!! | AGAGAGTACCTTAAAATGGA+GGG | - | chr4.1:23123868-23123887 | None:intergenic | 35.0% |
!! | GTTATAAGGTTCGGTGTAAA+TGG | - | chr4.1:23126738-23126757 | None:intergenic | 35.0% |
!! | GTTGACTCAATCAAAGCTTT+TGG | + | chr4.1:23125689-23125708 | MS.gene26543:CDS | 35.0% |
!! | TGCAGTTGAAAGCTTTAAGA+AGG | + | chr4.1:23126448-23126467 | MS.gene26543:CDS | 35.0% |
AACACCGGTCCTAATACAAA+TGG | + | chr4.1:23125383-23125402 | MS.gene26543:CDS | 40.0% | |
AAGGAAAGGGATGCTATCAA+TGG | + | chr4.1:23125358-23125377 | MS.gene26543:CDS | 40.0% | |
ACAGAATTTGCAATGCGTGA+AGG | + | chr4.1:23126220-23126239 | MS.gene26543:CDS | 40.0% | |
ACCATGTATGCCTAGTGAAA+TGG | - | chr4.1:23126410-23126429 | None:intergenic | 40.0% | |
AGCATAGGTGAAGAACTAGA+AGG | + | chr4.1:23123738-23123757 | MS.gene26543:CDS | 40.0% | |
ATGCTATCAATGGCAAACAC+CGG | + | chr4.1:23125368-23125387 | MS.gene26543:CDS | 40.0% | |
ATGGTGATACTTATCCCGAT+TGG | + | chr4.1:23125615-23125634 | MS.gene26543:CDS | 40.0% | |
CCTTCTCCCAACAAATATCT+AGG | - | chr4.1:23125869-23125888 | None:intergenic | 40.0% | |
CGGTGATGCATTTCTTGAAT+TGG | + | chr4.1:23124426-23124445 | MS.gene26543:intron | 40.0% | |
CTAGAAGCCTGACATAGTAA+AGG | - | chr4.1:23126332-23126351 | None:intergenic | 40.0% | |
TATGCCATCATCTTCTCCTT+CGG | - | chr4.1:23125579-23125598 | None:intergenic | 40.0% | |
TCCATTTCACTAGGCATACA+TGG | + | chr4.1:23126406-23126425 | MS.gene26543:intron | 40.0% | |
TTGTCACCCTTTACTATGTC+AGG | + | chr4.1:23126322-23126341 | MS.gene26543:intron | 40.0% | |
! | CCTAGATATTTGTTGGGAGA+AGG | + | chr4.1:23125866-23125885 | MS.gene26543:CDS | 40.0% |
! | GATATTTGTTGGGAGAAGGA+AGG | + | chr4.1:23125870-23125889 | MS.gene26543:CDS | 40.0% |
! | GGGATACCTTTTGGATACTT+TGG | + | chr4.1:23124238-23124257 | MS.gene26543:intron | 40.0% |
! | TGCTGCTTGTACAGTTGTAA+GGG | + | chr4.1:23125039-23125058 | MS.gene26543:intron | 40.0% |
!! | GAGAGTACCTTAAAATGGAG+GGG | - | chr4.1:23123867-23123886 | None:intergenic | 40.0% |
!! | GGTACATTTGGGATACCTTT+TGG | + | chr4.1:23124229-23124248 | MS.gene26543:intron | 40.0% |
!! | GTTAAAGGCGCTATGATTGA+AGG | + | chr4.1:23125248-23125267 | MS.gene26543:CDS | 40.0% |
!! | TATGTCAGGCTTCTAGTTTC+AGG | + | chr4.1:23126336-23126355 | MS.gene26543:intron | 40.0% |
AACCACCAGTCAAGTTCACT+GGG | - | chr4.1:23125662-23125681 | None:intergenic | 45.0% | |
ACACGAACTGCTCATCTAGA+TGG | + | chr4.1:23125428-23125447 | MS.gene26543:CDS | 45.0% | |
AGACAGAAGCTATGTTGGTG+TGG | + | chr4.1:23124470-23124489 | MS.gene26543:intron | 45.0% | |
ATATCTGCTGGAGATGGTAC+TGG | + | chr4.1:23125278-23125297 | MS.gene26543:CDS | 45.0% | |
ATGCCATCATCTTCTCCTTC+GGG | - | chr4.1:23125578-23125597 | None:intergenic | 45.0% | |
ATTCCCGAAGGAGAAGATGA+TGG | + | chr4.1:23125572-23125591 | MS.gene26543:CDS | 45.0% | |
GAAGGAGGTGATATATCTGC+TGG | + | chr4.1:23125266-23125285 | MS.gene26543:CDS | 45.0% | |
GAGAAGGAAGGGATTGATGA+AGG | + | chr4.1:23125882-23125901 | MS.gene26543:CDS | 45.0% | |
GATTGTGGAGAAATTCCCGA+AGG | + | chr4.1:23125560-23125579 | MS.gene26543:CDS | 45.0% | |
GCTGCTTGTACAGTTGTAAG+GGG | + | chr4.1:23125040-23125059 | MS.gene26543:intron | 45.0% | |
GGGTTTGCAGAGAAAAGTTC+AGG | + | chr4.1:23126011-23126030 | MS.gene26543:intron | 45.0% | |
GGTGATATATCTGCTGGAGA+TGG | + | chr4.1:23125272-23125291 | MS.gene26543:CDS | 45.0% | |
TCGCAACGTGCTCAATTGAA+CGG | - | chr4.1:23125499-23125518 | None:intergenic | 45.0% | |
! | CACAGAAAAGTACACCGCAA+AGG | - | chr4.1:23126532-23126551 | None:intergenic | 45.0% |
! | CTAACCATCATTTGGCTCCA+AGG | - | chr4.1:23126480-23126499 | None:intergenic | 45.0% |
!! | AAAGGCATTGCTCCCAATAC+TGG | + | chr4.1:23123837-23123856 | MS.gene26543:CDS | 45.0% |
!! | AAAGGCGCTATGATTGAAGG+AGG | + | chr4.1:23125251-23125270 | MS.gene26543:CDS | 45.0% |
!! | AAGGCATTGCTCCCAATACT+GGG | + | chr4.1:23123838-23123857 | MS.gene26543:CDS | 45.0% |
!! | CTTTAAGAAGGCACTGACCT+TGG | + | chr4.1:23126460-23126479 | MS.gene26543:CDS | 45.0% |
!! | GCAAAAGCTTTGTTTCGCCA+AGG | + | chr4.1:23126253-23126272 | MS.gene26543:CDS | 45.0% |
!! | GGCTCTAAGGAAGTATCGAA+AGG | + | chr4.1:23125833-23125852 | MS.gene26543:CDS | 45.0% |
!! | GTGCTGCTTGTACAGTTGTA+AGG | + | chr4.1:23125038-23125057 | MS.gene26543:intron | 45.0% |
ACCACCAGTCAAGTTCACTG+GGG | - | chr4.1:23125661-23125680 | None:intergenic | 50.0% | |
AGATCCCCAGTGAACTTGAC+TGG | + | chr4.1:23125654-23125673 | MS.gene26543:CDS | 50.0% | |
AGATGCACTCACCTTCTTCC+TGG | - | chr4.1:23126807-23126826 | None:intergenic | 50.0% | |
CAACCACCAGTCAAGTTCAC+TGG | - | chr4.1:23125663-23125682 | None:intergenic | 50.0% | |
CTGACCTTGGAGCCAAATGA+TGG | + | chr4.1:23126473-23126492 | MS.gene26543:CDS | 50.0% | |
GTCAAGTTCACTGGGGATCT+CGG | - | chr4.1:23125654-23125673 | None:intergenic | 50.0% | |
TAGCCATACCAACCTGTCCT+TGG | - | chr4.1:23126273-23126292 | None:intergenic | 50.0% | |
TCAATTGAGCACGTTGCGAC+CGG | + | chr4.1:23125500-23125519 | MS.gene26543:CDS | 50.0% | |
TTGTTTCGCCAAGGACAGGT+TGG | + | chr4.1:23126262-23126281 | MS.gene26543:intron | 50.0% | |
! | AGGCATTGCTCCCAATACTG+GGG | + | chr4.1:23123839-23123858 | MS.gene26543:CDS | 50.0% |
!! | AGCTTTGTTTCGCCAAGGAC+AGG | + | chr4.1:23126258-23126277 | MS.gene26543:CDS | 50.0% |
!! | TGGGGTACCCCTCCATTTTA+AGG | + | chr4.1:23123857-23123876 | MS.gene26543:CDS | 50.0% |
AAAAGGAACTAGCTGCGGCC+AGG | + | chr4.1:23126786-23126805 | MS.gene26543:CDS | 55.0% | |
AACAGGACGGTCTTCGTCTC+CGG | - | chr4.1:23125522-23125541 | None:intergenic | 55.0% | |
TCCCCAGTGAACTTGACTGG+TGG | + | chr4.1:23125657-23125676 | MS.gene26543:CDS | 55.0% | |
! | TCTGCTGGAGATGGTACTGG+AGG | + | chr4.1:23125281-23125300 | MS.gene26543:CDS | 55.0% |
!! | ATGGAGGGGTACCCCAGTAT+TGG | - | chr4.1:23123853-23123872 | None:intergenic | 55.0% |
!! | TCGCCAAGGACAGGTTGGTA+TGG | + | chr4.1:23126267-23126286 | MS.gene26543:intron | 55.0% |
!! | TGGAGGGGTACCCCAGTATT+GGG | - | chr4.1:23123852-23123871 | None:intergenic | 55.0% |
ACTAGCTGCGGCCAGGAAGA+AGG | + | chr4.1:23126793-23126812 | MS.gene26543:CDS | 60.0% | |
GCAAGGTCTGCAGGCCAATC+GGG | - | chr4.1:23125632-23125651 | None:intergenic | 60.0% | |
GGCAAGGTCTGCAGGCCAAT+CGG | - | chr4.1:23125633-23125652 | None:intergenic | 60.0% | |
GTTCACTGGGGATCTCGGCA+AGG | - | chr4.1:23125649-23125668 | None:intergenic | 60.0% | |
GGGATCTCGGCAAGGTCTGC+AGG | - | chr4.1:23125641-23125660 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 23123708 | 23126950 | 23123708 | ID=MS.gene26543 |
chr4.1 | mRNA | 23123708 | 23126950 | 23123708 | ID=MS.gene26543.t1;Parent=MS.gene26543 |
chr4.1 | exon | 23123708 | 23123878 | 23123708 | ID=MS.gene26543.t1.exon1;Parent=MS.gene26543.t1 |
chr4.1 | CDS | 23123708 | 23123878 | 23123708 | ID=cds.MS.gene26543.t1;Parent=MS.gene26543.t1 |
chr4.1 | exon | 23125227 | 23125727 | 23125227 | ID=MS.gene26543.t1.exon2;Parent=MS.gene26543.t1 |
chr4.1 | CDS | 23125227 | 23125727 | 23125227 | ID=cds.MS.gene26543.t1;Parent=MS.gene26543.t1 |
chr4.1 | exon | 23125816 | 23125903 | 23125816 | ID=MS.gene26543.t1.exon3;Parent=MS.gene26543.t1 |
chr4.1 | CDS | 23125816 | 23125903 | 23125816 | ID=cds.MS.gene26543.t1;Parent=MS.gene26543.t1 |
chr4.1 | exon | 23126021 | 23126073 | 23126021 | ID=MS.gene26543.t1.exon4;Parent=MS.gene26543.t1 |
chr4.1 | CDS | 23126021 | 23126073 | 23126021 | ID=cds.MS.gene26543.t1;Parent=MS.gene26543.t1 |
chr4.1 | exon | 23126175 | 23126279 | 23126175 | ID=MS.gene26543.t1.exon5;Parent=MS.gene26543.t1 |
chr4.1 | CDS | 23126175 | 23126279 | 23126175 | ID=cds.MS.gene26543.t1;Parent=MS.gene26543.t1 |
chr4.1 | exon | 23126419 | 23126494 | 23126419 | ID=MS.gene26543.t1.exon6;Parent=MS.gene26543.t1 |
chr4.1 | CDS | 23126419 | 23126494 | 23126419 | ID=cds.MS.gene26543.t1;Parent=MS.gene26543.t1 |
chr4.1 | exon | 23126777 | 23126814 | 23126777 | ID=MS.gene26543.t1.exon7;Parent=MS.gene26543.t1 |
chr4.1 | CDS | 23126777 | 23126814 | 23126777 | ID=cds.MS.gene26543.t1;Parent=MS.gene26543.t1 |
chr4.1 | exon | 23126891 | 23126950 | 23126891 | ID=MS.gene26543.t1.exon8;Parent=MS.gene26543.t1 |
chr4.1 | CDS | 23126891 | 23126950 | 23126891 | ID=cds.MS.gene26543.t1;Parent=MS.gene26543.t1 |
Gene Sequence |
Protein sequence |