Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26910.t1 | TKY51141.1 | 78.4 | 208 | 34 | 1 | 1 | 197 | 1 | 208 | 3.90E-85 | 324.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26910.t1 | P32869 | 75.0 | 208 | 40 | 2 | 1 | 197 | 1 | 207 | 3.4e-82 | 305.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26910.t1 | T2DMR3 | 78.8 | 208 | 32 | 2 | 1 | 197 | 1 | 207 | 4.7e-85 | 323.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050581 | MS.gene26910 | 0.838915 | 2.17E-57 | -1.69E-46 |
MS.gene050767 | MS.gene26910 | 0.83611 | 1.13E-56 | -1.69E-46 |
MS.gene050770 | MS.gene26910 | 0.832656 | 8.35E-56 | -1.69E-46 |
MS.gene052271 | MS.gene26910 | 0.841518 | 4.53E-58 | -1.69E-46 |
MS.gene053322 | MS.gene26910 | 0.819034 | 1.44E-52 | -1.69E-46 |
MS.gene053813 | MS.gene26910 | 0.828204 | 1.02E-54 | -1.69E-46 |
MS.gene054376 | MS.gene26910 | 0.824142 | 9.47E-54 | -1.69E-46 |
MS.gene055499 | MS.gene26910 | 0.827066 | 1.92E-54 | -1.69E-46 |
MS.gene055647 | MS.gene26910 | 0.828523 | 8.57E-55 | -1.69E-46 |
MS.gene056374 | MS.gene26910 | 0.814057 | 1.87E-51 | -1.69E-46 |
MS.gene056942 | MS.gene26910 | 0.840626 | 7.76E-58 | -1.69E-46 |
MS.gene057129 | MS.gene26910 | 0.803568 | 3.28E-49 | -1.69E-46 |
MS.gene058903 | MS.gene26910 | 0.828112 | 1.08E-54 | -1.69E-46 |
MS.gene059536 | MS.gene26910 | 0.80694 | 6.45E-50 | -1.69E-46 |
MS.gene059711 | MS.gene26910 | 0.80808 | 3.69E-50 | -1.69E-46 |
MS.gene060356 | MS.gene26910 | 0.831402 | 1.70E-55 | -1.69E-46 |
MS.gene061134 | MS.gene26910 | 0.824459 | 7.98E-54 | -1.69E-46 |
MS.gene061200 | MS.gene26910 | 0.843761 | 1.15E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26910.t1 | MTR_1g104630 | 79.899 | 199 | 32 | 3 | 1 | 197 | 1 | 193 | 1.65e-109 | 311 |
MS.gene26910.t1 | MTR_5g006130 | 70.833 | 216 | 37 | 3 | 1 | 197 | 1 | 209 | 1.18e-102 | 295 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26910.t1 | AT1G03130 | 75.145 | 173 | 30 | 2 | 38 | 197 | 32 | 204 | 2.77e-88 | 258 |
MS.gene26910.t1 | AT4G02770 | 73.864 | 176 | 30 | 2 | 38 | 197 | 33 | 208 | 5.39e-87 | 255 |
Find 74 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACTTGGGCTTTGCGTAAA+AGG | 0.172350 | 1.2:-77737691 | None:intergenic |
CGACCCGGGTTCACTTTCTC+TGG | 0.253150 | 1.2:-77737944 | None:intergenic |
AAGGGGTTGGTCAGAACTTT+AGG | 0.293589 | 1.2:+77737969 | MS.gene26910:CDS |
ATTTCAAAGATTTGTTCTTT+TGG | 0.302487 | 1.2:-77737743 | None:intergenic |
CCTTGCTAACTTGAGAAGAT+TGG | 0.306141 | 1.2:-77737801 | None:intergenic |
GGTCAGAACTTTAGGTCTAT+TGG | 0.344103 | 1.2:+77737977 | MS.gene26910:CDS |
AGCCTAAGACTGAGAGGGTT+TGG | 0.354319 | 1.2:-77737542 | None:intergenic |
AGAGATACGGTCATTAGGTT+TGG | 0.376453 | 1.2:-77737480 | None:intergenic |
CTCTTCACCCCTCCTCTCTC+TGG | 0.385923 | 1.2:+77737455 | MS.gene26910:CDS |
AAAGAACAATGTTTGGCTCT+TGG | 0.389124 | 1.2:+77737824 | MS.gene26910:CDS |
GGTACAGAGATACGGTCATT+AGG | 0.394276 | 1.2:-77737485 | None:intergenic |
AGCAAGGAAAGAACAATGTT+TGG | 0.394375 | 1.2:+77737817 | MS.gene26910:CDS |
CTTGCTAACTTGAGAAGATT+GGG | 0.409133 | 1.2:-77737800 | None:intergenic |
TGGGAAACACTCTATAGAAT+TGG | 0.417334 | 1.2:-77737880 | None:intergenic |
CCACTGAACTTAACCTCTAT+AGG | 0.417689 | 1.2:-77738013 | None:intergenic |
GAGATACGGTCATTAGGTTT+GGG | 0.426468 | 1.2:-77737479 | None:intergenic |
TCTGGGTACACACCATCCTT+AGG | 0.434810 | 1.2:-77737926 | None:intergenic |
TGACCAACCCCTTGGCGACC+CGG | 0.439253 | 1.2:-77737959 | None:intergenic |
TCTATAGAGTGTTTCCCAAT+GGG | 0.441504 | 1.2:+77737885 | MS.gene26910:CDS |
AGAGAGAGGAGGGGTGAAGA+GGG | 0.442080 | 1.2:-77737453 | None:intergenic |
ATCCAAACCCTCTCAGTCTT+AGG | 0.461548 | 1.2:+77737540 | MS.gene26910:CDS |
AAGTATTGAACTTCCCCATT+GGG | 0.462594 | 1.2:-77737899 | None:intergenic |
TACATAAAATTCCTCAACTT+GGG | 0.465412 | 1.2:-77737705 | None:intergenic |
TAAGAATGTTAGTCCTATAG+AGG | 0.473752 | 1.2:+77738000 | MS.gene26910:CDS |
GTTTGGGACCAGAGAGAGGA+GGG | 0.477785 | 1.2:-77737463 | None:intergenic |
CAGAGAGAGGAGGGGTGAAG+AGG | 0.479426 | 1.2:-77737454 | None:intergenic |
CAAATCTTTGAAATGCCTAC+TGG | 0.482126 | 1.2:+77737752 | MS.gene26910:CDS |
ATGTTTGTGTCTTACTCAGG+TGG | 0.482467 | 1.2:-77737635 | None:intergenic |
GACCCGGGTTCACTTTCTCT+GGG | 0.486087 | 1.2:-77737943 | None:intergenic |
GAGAGGAGGGGTGAAGAGGG+AGG | 0.499448 | 1.2:-77737450 | None:intergenic |
AAAGTGAACCCGGGTCGCCA+AGG | 0.500800 | 1.2:+77737950 | MS.gene26910:CDS |
TTACATAAAATTCCTCAACT+TGG | 0.508639 | 1.2:-77737706 | None:intergenic |
TCAGGTGGGGTGAAGCCAAT+TGG | 0.510396 | 1.2:-77737620 | None:intergenic |
GAAGCAACAGAGGCACCAAT+TGG | 0.510520 | 1.2:+77737605 | MS.gene26910:CDS |
AACCCGGGTCGCCAAGGGGT+TGG | 0.516971 | 1.2:+77737956 | MS.gene26910:CDS |
GACCAACCCCTTGGCGACCC+GGG | 0.524362 | 1.2:-77737958 | None:intergenic |
AATGTGGGTGATTGTTTCCA+TGG | 0.524862 | 1.2:-77737506 | None:intergenic |
TTCTATAGAGTGTTTCCCAA+TGG | 0.534519 | 1.2:+77737884 | MS.gene26910:CDS |
CAAGTATTGAACTTCCCCAT+TGG | 0.539423 | 1.2:-77737900 | None:intergenic |
TGTTTGTGTCTTACTCAGGT+GGG | 0.540009 | 1.2:-77737634 | None:intergenic |
TGGATTGGTGAAGGACAATG+TGG | 0.545639 | 1.2:-77737522 | None:intergenic |
TGGCTCTTGGAACTACATTG+AGG | 0.549525 | 1.2:+77737837 | MS.gene26910:CDS |
AAGTGAACCCGGGTCGCCAA+GGG | 0.549528 | 1.2:+77737951 | MS.gene26910:CDS |
GTTTCCATGGTACAGAGATA+CGG | 0.551001 | 1.2:-77737493 | None:intergenic |
GGTTTGGGACCAGAGAGAGG+AGG | 0.559759 | 1.2:-77737464 | None:intergenic |
ATTGGGACCTTCCCTCATGA+TGG | 0.564788 | 1.2:-77737783 | None:intergenic |
GTACCCAGAGAAAGTGAACC+CGG | 0.564935 | 1.2:+77737940 | MS.gene26910:CDS |
GAGAGGGTTTGGATTGGTGA+AGG | 0.565450 | 1.2:-77737531 | None:intergenic |
CAAAACAACAACTGTTACTG+AGG | 0.567600 | 1.2:+77737583 | MS.gene26910:CDS |
TAAAGTTCTGACCAACCCCT+TGG | 0.570035 | 1.2:-77737967 | None:intergenic |
AGTTCAATACTTGCATCCTA+AGG | 0.578655 | 1.2:+77737910 | MS.gene26910:CDS |
GTTTGTGTCTTACTCAGGTG+GGG | 0.582440 | 1.2:-77737633 | None:intergenic |
CCAATCTTCTCAAGTTAGCA+AGG | 0.583877 | 1.2:+77737801 | MS.gene26910:CDS |
CAATACTTGCATCCTAAGGA+TGG | 0.585635 | 1.2:+77737914 | MS.gene26910:CDS |
AAGACTGAGAGGGTTTGGAT+TGG | 0.585730 | 1.2:-77737537 | None:intergenic |
CTGGTGGTGCAGCCATCATG+AGG | 0.591206 | 1.2:+77737771 | MS.gene26910:CDS |
GAGGGAGGTTTGAGTTGCCG+TGG | 0.592804 | 1.2:-77737435 | None:intergenic |
CCTATAGAGGTTAAGTTCAG+TGG | 0.595489 | 1.2:+77738013 | MS.gene26910:CDS |
AAACCACCTCACAATGGCCA+CGG | 0.601200 | 1.2:+77737418 | None:intergenic |
TTAGGTTTGGGACCAGAGAG+AGG | 0.606251 | 1.2:-77737467 | None:intergenic |
TTTGGGACCAGAGAGAGGAG+GGG | 0.614499 | 1.2:-77737462 | None:intergenic |
GGTGCAGCCATCATGAGGGA+AGG | 0.635464 | 1.2:+77737776 | MS.gene26910:CDS |
TTGTGAGCCTAAGACTGAGA+GGG | 0.636675 | 1.2:-77737547 | None:intergenic |
ATGATGGCTGCACCACCAGT+AGG | 0.647307 | 1.2:-77737767 | None:intergenic |
TTTACGCAAAGCCCAAGTTG+AGG | 0.649694 | 1.2:+77737694 | MS.gene26910:CDS |
CTATAGAGTGTTTCCCAATG+GGG | 0.656977 | 1.2:+77737886 | MS.gene26910:CDS |
AGTGAACCCGGGTCGCCAAG+GGG | 0.658596 | 1.2:+77737952 | MS.gene26910:CDS |
ATCTTTGAAATGCCTACTGG+TGG | 0.664160 | 1.2:+77737755 | MS.gene26910:CDS |
TGTTACTGAGGAAGCAACAG+AGG | 0.671184 | 1.2:+77737595 | MS.gene26910:CDS |
TGGTGGTGCAGCCATCATGA+GGG | 0.675901 | 1.2:+77737772 | MS.gene26910:CDS |
ATTGTGAGCCTAAGACTGAG+AGG | 0.683773 | 1.2:-77737548 | None:intergenic |
TACCCAGAGAAAGTGAACCC+GGG | 0.686978 | 1.2:+77737941 | MS.gene26910:CDS |
ATGACCGTATCTCTGTACCA+TGG | 0.695290 | 1.2:+77737489 | MS.gene26910:CDS |
GGATTGGTGAAGGACAATGT+GGG | 0.717553 | 1.2:-77737521 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTCAAAGATTTGTTCTTT+TGG | - | chr1.2:77737746-77737765 | None:intergenic | 20.0% |
! | TACATAAAATTCCTCAACTT+GGG | - | chr1.2:77737708-77737727 | None:intergenic | 25.0% |
! | TTACATAAAATTCCTCAACT+TGG | - | chr1.2:77737709-77737728 | None:intergenic | 25.0% |
!! | AGGAATTTTATGTAATCACA+TGG | + | chr1.2:77737714-77737733 | MS.gene26910:CDS | 25.0% |
!! | GGAATTTTATGTAATCACAT+GGG | + | chr1.2:77737715-77737734 | MS.gene26910:CDS | 25.0% |
TAAGAATGTTAGTCCTATAG+AGG | + | chr1.2:77738000-77738019 | MS.gene26910:CDS | 30.0% | |
AGCAAGGAAAGAACAATGTT+TGG | + | chr1.2:77737817-77737836 | MS.gene26910:CDS | 35.0% | |
AGTTCAATACTTGCATCCTA+AGG | + | chr1.2:77737910-77737929 | MS.gene26910:CDS | 35.0% | |
CAAAACAACAACTGTTACTG+AGG | + | chr1.2:77737583-77737602 | MS.gene26910:CDS | 35.0% | |
CTTGCTAACTTGAGAAGATT+GGG | - | chr1.2:77737803-77737822 | None:intergenic | 35.0% | |
TGGGAAACACTCTATAGAAT+TGG | - | chr1.2:77737883-77737902 | None:intergenic | 35.0% | |
! | TCTATAGAGTGTTTCCCAAT+GGG | + | chr1.2:77737885-77737904 | MS.gene26910:CDS | 35.0% |
! | TTCTATAGAGTGTTTCCCAA+TGG | + | chr1.2:77737884-77737903 | MS.gene26910:CDS | 35.0% |
!! | AAAGAACAATGTTTGGCTCT+TGG | + | chr1.2:77737824-77737843 | MS.gene26910:CDS | 35.0% |
!! | AAGTATTGAACTTCCCCATT+GGG | - | chr1.2:77737902-77737921 | None:intergenic | 35.0% |
!! | CAAATCTTTGAAATGCCTAC+TGG | + | chr1.2:77737752-77737771 | MS.gene26910:CDS | 35.0% |
AATGTGGGTGATTGTTTCCA+TGG | - | chr1.2:77737509-77737528 | None:intergenic | 40.0% | |
AGAGATACGGTCATTAGGTT+TGG | - | chr1.2:77737483-77737502 | None:intergenic | 40.0% | |
AGTACTGCCACTGAAAATTG+GGG | - | chr1.2:77737666-77737685 | None:intergenic | 40.0% | |
ATGTTTGTGTCTTACTCAGG+TGG | - | chr1.2:77737638-77737657 | None:intergenic | 40.0% | |
CAATACTTGCATCCTAAGGA+TGG | + | chr1.2:77737914-77737933 | MS.gene26910:CDS | 40.0% | |
CAGTACTGCCACTGAAAATT+GGG | - | chr1.2:77737667-77737686 | None:intergenic | 40.0% | |
CCAATCTTCTCAAGTTAGCA+AGG | + | chr1.2:77737801-77737820 | MS.gene26910:CDS | 40.0% | |
CCACTGAACTTAACCTCTAT+AGG | - | chr1.2:77738016-77738035 | None:intergenic | 40.0% | |
CCTATAGAGGTTAAGTTCAG+TGG | + | chr1.2:77738013-77738032 | MS.gene26910:CDS | 40.0% | |
CCTTGCTAACTTGAGAAGAT+TGG | - | chr1.2:77737804-77737823 | None:intergenic | 40.0% | |
GAGATACGGTCATTAGGTTT+GGG | - | chr1.2:77737482-77737501 | None:intergenic | 40.0% | |
GGAATGTTTGTGTCTTACTC+AGG | - | chr1.2:77737641-77737660 | None:intergenic | 40.0% | |
GGTCAGAACTTTAGGTCTAT+TGG | + | chr1.2:77737977-77737996 | MS.gene26910:CDS | 40.0% | |
GTTTCCATGGTACAGAGATA+CGG | - | chr1.2:77737496-77737515 | None:intergenic | 40.0% | |
TGTTTGTGTCTTACTCAGGT+GGG | - | chr1.2:77737637-77737656 | None:intergenic | 40.0% | |
! | CTATAGAGTGTTTCCCAATG+GGG | + | chr1.2:77737886-77737905 | MS.gene26910:CDS | 40.0% |
!! | ATCTTTGAAATGCCTACTGG+TGG | + | chr1.2:77737755-77737774 | MS.gene26910:CDS | 40.0% |
!! | CAAGTATTGAACTTCCCCAT+TGG | - | chr1.2:77737903-77737922 | None:intergenic | 40.0% |
AAGACTGAGAGGGTTTGGAT+TGG | - | chr1.2:77737540-77737559 | None:intergenic | 45.0% | |
ATCCAAACCCTCTCAGTCTT+AGG | + | chr1.2:77737540-77737559 | MS.gene26910:CDS | 45.0% | |
ATGACCGTATCTCTGTACCA+TGG | + | chr1.2:77737489-77737508 | MS.gene26910:CDS | 45.0% | |
ATTGTGAGCCTAAGACTGAG+AGG | - | chr1.2:77737551-77737570 | None:intergenic | 45.0% | |
CAACTTGGGCTTTGCGTAAA+AGG | - | chr1.2:77737694-77737713 | None:intergenic | 45.0% | |
CCAGTACTGCCACTGAAAAT+TGG | - | chr1.2:77737668-77737687 | None:intergenic | 45.0% | |
GGTACAGAGATACGGTCATT+AGG | - | chr1.2:77737488-77737507 | None:intergenic | 45.0% | |
GTTTGTGTCTTACTCAGGTG+GGG | - | chr1.2:77737636-77737655 | None:intergenic | 45.0% | |
TGGCTCTTGGAACTACATTG+AGG | + | chr1.2:77737837-77737856 | MS.gene26910:CDS | 45.0% | |
TGTTACTGAGGAAGCAACAG+AGG | + | chr1.2:77737595-77737614 | MS.gene26910:CDS | 45.0% | |
TTGTGAGCCTAAGACTGAGA+GGG | - | chr1.2:77737550-77737569 | None:intergenic | 45.0% | |
TTTACGCAAAGCCCAAGTTG+AGG | + | chr1.2:77737694-77737713 | MS.gene26910:CDS | 45.0% | |
! | ATTCCCTCCCCAATTTTCAG+TGG | + | chr1.2:77737656-77737675 | MS.gene26910:intron | 45.0% |
! | CCAATTTTCAGTGGCAGTAC+TGG | + | chr1.2:77737665-77737684 | MS.gene26910:intron | 45.0% |
! | GGATTGGTGAAGGACAATGT+GGG | - | chr1.2:77737524-77737543 | None:intergenic | 45.0% |
! | TAAAGTTCTGACCAACCCCT+TGG | - | chr1.2:77737970-77737989 | None:intergenic | 45.0% |
!! | AAGGGGTTGGTCAGAACTTT+AGG | + | chr1.2:77737969-77737988 | MS.gene26910:CDS | 45.0% |
!! | ATTTTCAGTGGCAGTACTGG+AGG | + | chr1.2:77737668-77737687 | MS.gene26910:intron | 45.0% |
!! | TGGATTGGTGAAGGACAATG+TGG | - | chr1.2:77737525-77737544 | None:intergenic | 45.0% |
ACTGCCACTGAAAATTGGGG+AGG | - | chr1.2:77737663-77737682 | None:intergenic | 50.0% | |
AGCCTAAGACTGAGAGGGTT+TGG | - | chr1.2:77737545-77737564 | None:intergenic | 50.0% | |
ATTGGGACCTTCCCTCATGA+TGG | - | chr1.2:77737786-77737805 | None:intergenic | 50.0% | |
CTGCCACTGAAAATTGGGGA+GGG | - | chr1.2:77737662-77737681 | None:intergenic | 50.0% | |
GTACCCAGAGAAAGTGAACC+CGG | + | chr1.2:77737940-77737959 | MS.gene26910:CDS | 50.0% | |
TACCCAGAGAAAGTGAACCC+GGG | + | chr1.2:77737941-77737960 | MS.gene26910:CDS | 50.0% | |
TCTGGGTACACACCATCCTT+AGG | - | chr1.2:77737929-77737948 | None:intergenic | 50.0% | |
! | TTAGGTTTGGGACCAGAGAG+AGG | - | chr1.2:77737470-77737489 | None:intergenic | 50.0% |
!! | GAAGCAACAGAGGCACCAAT+TGG | + | chr1.2:77737605-77737624 | MS.gene26910:CDS | 50.0% |
!! | GAGAGGGTTTGGATTGGTGA+AGG | - | chr1.2:77737534-77737553 | None:intergenic | 50.0% |
AGAGAGAGGAGGGGTGAAGA+GGG | - | chr1.2:77737456-77737475 | None:intergenic | 55.0% | |
ATGATGGCTGCACCACCAGT+AGG | - | chr1.2:77737770-77737789 | None:intergenic | 55.0% | |
GACCCGGGTTCACTTTCTCT+GGG | - | chr1.2:77737946-77737965 | None:intergenic | 55.0% | |
TCAGGTGGGGTGAAGCCAAT+TGG | - | chr1.2:77737623-77737642 | None:intergenic | 55.0% | |
! | GTTTGGGACCAGAGAGAGGA+GGG | - | chr1.2:77737466-77737485 | None:intergenic | 55.0% |
! | TGGTGGTGCAGCCATCATGA+GGG | + | chr1.2:77737772-77737791 | MS.gene26910:CDS | 55.0% |
! | TTTGGGACCAGAGAGAGGAG+GGG | - | chr1.2:77737465-77737484 | None:intergenic | 55.0% |
AAAGTGAACCCGGGTCGCCA+AGG | + | chr1.2:77737950-77737969 | MS.gene26910:CDS | 60.0% | |
AAGTGAACCCGGGTCGCCAA+GGG | + | chr1.2:77737951-77737970 | MS.gene26910:CDS | 60.0% | |
CAGAGAGAGGAGGGGTGAAG+AGG | - | chr1.2:77737457-77737476 | None:intergenic | 60.0% | |
CGACCCGGGTTCACTTTCTC+TGG | - | chr1.2:77737947-77737966 | None:intergenic | 60.0% | |
CTCTTCACCCCTCCTCTCTC+TGG | + | chr1.2:77737455-77737474 | MS.gene26910:CDS | 60.0% | |
GGTGCAGCCATCATGAGGGA+AGG | + | chr1.2:77737776-77737795 | MS.gene26910:CDS | 60.0% | |
! | CTGGTGGTGCAGCCATCATG+AGG | + | chr1.2:77737771-77737790 | MS.gene26910:CDS | 60.0% |
! | GGTTTGGGACCAGAGAGAGG+AGG | - | chr1.2:77737467-77737486 | None:intergenic | 60.0% |
!! | GAGGGAGGTTTGAGTTGCCG+TGG | - | chr1.2:77737438-77737457 | None:intergenic | 60.0% |
AGTGAACCCGGGTCGCCAAG+GGG | + | chr1.2:77737952-77737971 | MS.gene26910:CDS | 65.0% | |
GAGAGGAGGGGTGAAGAGGG+AGG | - | chr1.2:77737453-77737472 | None:intergenic | 65.0% | |
TGACCAACCCCTTGGCGACC+CGG | - | chr1.2:77737962-77737981 | None:intergenic | 65.0% | |
AACCCGGGTCGCCAAGGGGT+TGG | + | chr1.2:77737956-77737975 | MS.gene26910:CDS | 70.0% | |
GACCAACCCCTTGGCGACCC+GGG | - | chr1.2:77737961-77737980 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 77737431 | 77738057 | 77737431 | ID=MS.gene26910 |
chr1.2 | mRNA | 77737431 | 77738057 | 77737431 | ID=MS.gene26910.t1;Parent=MS.gene26910 |
chr1.2 | exon | 77737431 | 77737642 | 77737431 | ID=MS.gene26910.t1.exon1;Parent=MS.gene26910.t1 |
chr1.2 | CDS | 77737431 | 77737642 | 77737431 | ID=cds.MS.gene26910.t1;Parent=MS.gene26910.t1 |
chr1.2 | exon | 77737676 | 77738057 | 77737676 | ID=MS.gene26910.t1.exon2;Parent=MS.gene26910.t1 |
chr1.2 | CDS | 77737676 | 77738057 | 77737676 | ID=cds.MS.gene26910.t1;Parent=MS.gene26910.t1 |
Gene Sequence |
Protein sequence |