Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27776.t1 | XP_024625873.1 | 94.8 | 330 | 17 | 0 | 1 | 330 | 1 | 330 | 1.70E-181 | 645.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27776.t1 | Q40316 | 66.7 | 330 | 106 | 2 | 1 | 330 | 1 | 326 | 2.4e-128 | 459.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27776.t1 | A0A396H223 | 94.8 | 330 | 17 | 0 | 1 | 330 | 1 | 330 | 1.2e-181 | 645.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051568 | MS.gene27776 | 0.809013 | 2.33E-50 | -1.69E-46 |
MS.gene058738 | MS.gene27776 | 0.804558 | 2.04E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene27776 | MS.gene40148 | PPI |
MS.gene27776 | MS.gene071398 | PPI |
MS.gene27776 | MS.gene56554 | PPI |
MS.gene27776 | MS.gene006771 | PPI |
MS.gene071401 | MS.gene27776 | PPI |
MS.gene27776 | MS.gene96808 | PPI |
MS.gene27776 | MS.gene40154 | PPI |
MS.gene028567 | MS.gene27776 | PPI |
MS.gene27776 | MS.gene031525 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27776.t1 | MTR_7g074850 | 94.545 | 330 | 17 | 1 | 1 | 330 | 1 | 329 | 0.0 | 647 |
MS.gene27776.t1 | MTR_7g074820 | 89.091 | 330 | 35 | 1 | 1 | 330 | 1 | 329 | 0.0 | 602 |
MS.gene27776.t1 | MTR_7g074730 | 85.152 | 330 | 47 | 2 | 1 | 330 | 1 | 328 | 0.0 | 580 |
MS.gene27776.t1 | MTR_7g074880 | 75.152 | 330 | 78 | 2 | 1 | 330 | 1 | 326 | 0.0 | 523 |
MS.gene27776.t1 | MTR_7g074710 | 66.364 | 330 | 107 | 2 | 1 | 330 | 1 | 326 | 8.68e-166 | 464 |
MS.gene27776.t1 | MTR_7g074870 | 71.875 | 288 | 78 | 1 | 43 | 330 | 4 | 288 | 1.42e-154 | 435 |
MS.gene27776.t1 | MTR_4g023730 | 50.755 | 331 | 160 | 2 | 1 | 330 | 1 | 329 | 1.67e-109 | 322 |
MS.gene27776.t1 | MTR_1g022440 | 47.368 | 323 | 165 | 4 | 8 | 330 | 8 | 325 | 5.32e-101 | 301 |
MS.gene27776.t1 | MTR_1g022445 | 47.059 | 323 | 166 | 4 | 8 | 330 | 8 | 325 | 1.13e-98 | 295 |
MS.gene27776.t1 | MTR_4g092080 | 40.179 | 336 | 187 | 5 | 1 | 328 | 7 | 336 | 2.14e-78 | 243 |
MS.gene27776.t1 | MTR_4g081440 | 37.537 | 341 | 189 | 9 | 6 | 330 | 22 | 354 | 4.40e-72 | 227 |
MS.gene27776.t1 | MTR_4g081440 | 37.537 | 341 | 188 | 10 | 6 | 330 | 18 | 349 | 1.10e-70 | 224 |
MS.gene27776.t1 | MTR_2g101330 | 37.920 | 327 | 189 | 9 | 7 | 330 | 4 | 319 | 1.71e-64 | 207 |
MS.gene27776.t1 | MTR_3g005210 | 35.061 | 328 | 195 | 8 | 8 | 330 | 6 | 320 | 2.24e-58 | 191 |
MS.gene27776.t1 | MTR_2g013230 | 34.971 | 346 | 203 | 8 | 1 | 330 | 1 | 340 | 1.81e-57 | 189 |
MS.gene27776.t1 | MTR_4g077130 | 35.821 | 335 | 196 | 12 | 1 | 329 | 1 | 322 | 9.51e-57 | 187 |
MS.gene27776.t1 | MTR_8g062110 | 36.145 | 332 | 193 | 9 | 1 | 327 | 2 | 319 | 1.78e-56 | 186 |
MS.gene27776.t1 | MTR_8g062110 | 35.843 | 332 | 194 | 8 | 1 | 327 | 11 | 328 | 1.83e-56 | 186 |
MS.gene27776.t1 | MTR_5g056600 | 35.583 | 326 | 195 | 9 | 9 | 330 | 5 | 319 | 3.39e-56 | 185 |
MS.gene27776.t1 | MTR_8g062440 | 35.821 | 335 | 197 | 8 | 1 | 330 | 1 | 322 | 9.25e-56 | 184 |
MS.gene27776.t1 | MTR_8g062110 | 37.456 | 283 | 164 | 5 | 1 | 280 | 2 | 274 | 1.24e-53 | 177 |
MS.gene27776.t1 | MTR_8g062110 | 37.456 | 283 | 164 | 5 | 1 | 280 | 2 | 274 | 1.50e-53 | 177 |
MS.gene27776.t1 | MTR_8g062440 | 35.522 | 335 | 197 | 9 | 1 | 330 | 1 | 321 | 1.99e-53 | 178 |
MS.gene27776.t1 | MTR_3g005170 | 34.251 | 327 | 197 | 9 | 8 | 329 | 10 | 323 | 2.02e-53 | 178 |
MS.gene27776.t1 | MTR_3g031650 | 35.241 | 332 | 189 | 11 | 8 | 330 | 5 | 319 | 4.40e-53 | 177 |
MS.gene27776.t1 | MTR_2g013250 | 33.724 | 341 | 206 | 8 | 3 | 328 | 2 | 337 | 5.15e-52 | 175 |
MS.gene27776.t1 | MTR_3g005170 | 36.462 | 277 | 164 | 6 | 8 | 281 | 10 | 277 | 7.92e-52 | 172 |
MS.gene27776.t1 | MTR_4g077100 | 36.140 | 285 | 169 | 7 | 1 | 281 | 3 | 278 | 8.76e-51 | 170 |
MS.gene27776.t1 | MTR_8g062440 | 37.809 | 283 | 163 | 6 | 1 | 280 | 1 | 273 | 1.70e-50 | 171 |
MS.gene27776.t1 | MTR_4g077100 | 36.491 | 285 | 168 | 8 | 1 | 281 | 3 | 278 | 2.61e-50 | 170 |
MS.gene27776.t1 | MTR_5g072620 | 35.843 | 332 | 187 | 11 | 8 | 330 | 5 | 319 | 1.83e-49 | 168 |
MS.gene27776.t1 | MTR_2g013260 | 35.174 | 344 | 201 | 9 | 1 | 328 | 1 | 338 | 2.83e-48 | 166 |
MS.gene27776.t1 | MTR_3g031650 | 36.201 | 279 | 160 | 8 | 8 | 280 | 5 | 271 | 5.83e-47 | 160 |
MS.gene27776.t1 | MTR_4g009040 | 33.945 | 327 | 198 | 9 | 7 | 330 | 12 | 323 | 7.14e-47 | 161 |
MS.gene27776.t1 | MTR_4g009040 | 33.434 | 332 | 197 | 10 | 7 | 330 | 12 | 327 | 2.06e-45 | 157 |
MS.gene27776.t1 | MTR_7g117190 | 33.333 | 345 | 207 | 11 | 3 | 330 | 2 | 340 | 6.29e-45 | 156 |
MS.gene27776.t1 | MTR_2g104960 | 34.557 | 327 | 193 | 13 | 8 | 330 | 20 | 329 | 2.04e-44 | 155 |
MS.gene27776.t1 | MTR_4g006940 | 33.333 | 327 | 197 | 11 | 8 | 330 | 17 | 326 | 2.79e-44 | 155 |
MS.gene27776.t1 | MTR_2g028620 | 33.043 | 345 | 193 | 13 | 2 | 330 | 4 | 326 | 4.34e-42 | 149 |
MS.gene27776.t1 | MTR_2g013260 | 34.915 | 295 | 175 | 6 | 1 | 280 | 1 | 293 | 4.80e-42 | 148 |
MS.gene27776.t1 | MTR_4g006940 | 35.018 | 277 | 164 | 8 | 8 | 282 | 17 | 279 | 1.25e-40 | 144 |
MS.gene27776.t1 | MTR_4g006940 | 35.018 | 277 | 164 | 8 | 8 | 282 | 17 | 279 | 1.25e-40 | 144 |
MS.gene27776.t1 | MTR_4g009690 | 32.416 | 327 | 202 | 9 | 7 | 330 | 12 | 322 | 2.82e-40 | 144 |
MS.gene27776.t1 | MTR_2g028620 | 35.106 | 282 | 163 | 9 | 2 | 275 | 4 | 273 | 2.64e-39 | 141 |
MS.gene27776.t1 | MTR_4g009690 | 31.902 | 326 | 206 | 8 | 7 | 330 | 12 | 323 | 3.79e-39 | 141 |
MS.gene27776.t1 | MTR_7g117190 | 34.014 | 294 | 176 | 9 | 3 | 280 | 2 | 293 | 2.04e-38 | 139 |
MS.gene27776.t1 | MTR_3g005170 | 30.581 | 327 | 178 | 10 | 8 | 329 | 10 | 292 | 7.83e-38 | 137 |
MS.gene27776.t1 | MTR_2g013230 | 31.707 | 246 | 148 | 7 | 101 | 330 | 9 | 250 | 1.05e-28 | 111 |
MS.gene27776.t1 | MTR_8g062110 | 31.718 | 227 | 138 | 7 | 106 | 327 | 19 | 233 | 2.08e-25 | 102 |
MS.gene27776.t1 | MTR_5g029990 | 29.964 | 277 | 161 | 13 | 8 | 276 | 12 | 263 | 1.59e-24 | 101 |
MS.gene27776.t1 | MTR_0164s0070 | 38.760 | 129 | 76 | 2 | 7 | 134 | 4 | 130 | 1.53e-23 | 96.7 |
MS.gene27776.t1 | MTR_8g062110 | 32.584 | 178 | 109 | 3 | 106 | 280 | 19 | 188 | 1.40e-22 | 93.6 |
MS.gene27776.t1 | MTR_7g117190 | 31.466 | 232 | 138 | 9 | 116 | 330 | 3 | 230 | 1.38e-20 | 89.4 |
MS.gene27776.t1 | MTR_6g406250 | 28.352 | 261 | 167 | 9 | 5 | 257 | 52 | 300 | 1.91e-20 | 90.9 |
MS.gene27776.t1 | MTR_2g013260 | 31.765 | 255 | 150 | 9 | 90 | 328 | 21 | 267 | 1.95e-19 | 87.0 |
MS.gene27776.t1 | MTR_7g074865 | 85.366 | 41 | 6 | 0 | 1 | 41 | 1 | 41 | 3.36e-19 | 80.9 |
MS.gene27776.t1 | MTR_6g406250 | 27.232 | 224 | 146 | 7 | 2 | 217 | 47 | 261 | 3.41e-17 | 80.5 |
MS.gene27776.t1 | MTR_3g101500 | 27.473 | 273 | 163 | 7 | 7 | 272 | 3 | 247 | 4.07e-14 | 72.0 |
MS.gene27776.t1 | MTR_3g101500 | 27.473 | 273 | 163 | 7 | 7 | 272 | 3 | 247 | 4.22e-14 | 72.4 |
MS.gene27776.t1 | MTR_0685s0030 | 31.624 | 117 | 76 | 1 | 165 | 281 | 3 | 115 | 1.05e-13 | 67.0 |
MS.gene27776.t1 | MTR_0685s0030 | 31.624 | 117 | 76 | 1 | 165 | 281 | 3 | 115 | 3.02e-13 | 67.0 |
MS.gene27776.t1 | MTR_3g101500 | 30.208 | 192 | 113 | 5 | 7 | 198 | 3 | 173 | 8.90e-13 | 67.0 |
MS.gene27776.t1 | MTR_3g011130 | 33.913 | 115 | 69 | 3 | 106 | 216 | 35 | 146 | 8.12e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27776.t1 | AT2G45400 | 51.051 | 333 | 155 | 4 | 3 | 330 | 35 | 364 | 9.72e-109 | 321 |
MS.gene27776.t1 | AT5G42800 | 47.734 | 331 | 166 | 5 | 1 | 330 | 1 | 325 | 6.78e-99 | 297 |
MS.gene27776.t1 | AT2G45400 | 51.379 | 290 | 134 | 3 | 3 | 287 | 35 | 322 | 4.89e-96 | 288 |
MS.gene27776.t1 | AT2G45400 | 50.340 | 294 | 138 | 4 | 42 | 330 | 17 | 307 | 7.97e-90 | 271 |
MS.gene27776.t1 | AT4G35420 | 41.964 | 336 | 174 | 9 | 1 | 330 | 1 | 321 | 1.68e-81 | 251 |
MS.gene27776.t1 | AT2G45400 | 54.091 | 220 | 96 | 2 | 3 | 217 | 35 | 254 | 3.06e-74 | 229 |
MS.gene27776.t1 | AT1G61720 | 39.458 | 332 | 187 | 8 | 7 | 330 | 12 | 337 | 1.28e-72 | 228 |
MS.gene27776.t1 | AT1G68540 | 39.571 | 326 | 182 | 10 | 10 | 330 | 6 | 321 | 1.15e-60 | 197 |
MS.gene27776.t1 | AT2G02400 | 37.092 | 337 | 180 | 12 | 5 | 330 | 3 | 318 | 2.50e-57 | 188 |
MS.gene27776.t1 | AT5G58490 | 37.464 | 347 | 175 | 12 | 1 | 330 | 2 | 323 | 2.86e-57 | 188 |
MS.gene27776.t1 | AT5G19440 | 37.003 | 327 | 188 | 9 | 8 | 329 | 10 | 323 | 1.92e-56 | 186 |
MS.gene27776.t1 | AT1G09480 | 36.503 | 326 | 193 | 7 | 8 | 330 | 8 | 322 | 3.39e-56 | 185 |
MS.gene27776.t1 | AT1G09480 | 36.503 | 326 | 193 | 7 | 8 | 330 | 55 | 369 | 7.98e-56 | 186 |
MS.gene27776.t1 | AT4G27250 | 32.938 | 337 | 205 | 7 | 2 | 322 | 7 | 338 | 1.36e-55 | 185 |
MS.gene27776.t1 | AT1G25460 | 36.615 | 325 | 191 | 8 | 10 | 330 | 6 | 319 | 3.99e-55 | 182 |
MS.gene27776.t1 | AT1G51410 | 34.535 | 333 | 200 | 9 | 3 | 330 | 4 | 323 | 9.61e-55 | 182 |
MS.gene27776.t1 | AT1G09490 | 35.276 | 326 | 197 | 8 | 8 | 330 | 8 | 322 | 3.34e-54 | 180 |
MS.gene27776.t1 | AT4G27250 | 31.928 | 332 | 205 | 6 | 2 | 322 | 7 | 328 | 1.71e-53 | 179 |
MS.gene27776.t1 | AT1G66800 | 34.848 | 330 | 203 | 8 | 1 | 330 | 1 | 318 | 4.51e-53 | 177 |
MS.gene27776.t1 | AT1G09510 | 36.533 | 323 | 191 | 8 | 8 | 327 | 8 | 319 | 7.25e-53 | 177 |
MS.gene27776.t1 | AT1G76470 | 36.991 | 319 | 190 | 7 | 5 | 321 | 4 | 313 | 1.44e-51 | 173 |
MS.gene27776.t1 | AT1G15950 | 35.692 | 325 | 192 | 9 | 8 | 330 | 13 | 322 | 2.80e-47 | 163 |
MS.gene27776.t1 | AT1G15950 | 35.692 | 325 | 192 | 9 | 8 | 330 | 13 | 322 | 2.80e-47 | 163 |
MS.gene27776.t1 | AT1G09500 | 35.636 | 275 | 164 | 6 | 8 | 278 | 8 | 273 | 1.47e-46 | 159 |
MS.gene27776.t1 | AT1G09500 | 35.563 | 284 | 170 | 7 | 8 | 287 | 8 | 282 | 2.66e-46 | 160 |
MS.gene27776.t1 | AT1G15950 | 35.144 | 313 | 187 | 7 | 8 | 318 | 13 | 311 | 9.37e-45 | 156 |
MS.gene27776.t1 | AT2G33590 | 33.841 | 328 | 186 | 11 | 5 | 322 | 6 | 312 | 2.11e-44 | 155 |
MS.gene27776.t1 | AT1G15950 | 37.906 | 277 | 156 | 8 | 8 | 282 | 13 | 275 | 3.27e-43 | 150 |
MS.gene27776.t1 | AT1G80820 | 35.152 | 330 | 187 | 12 | 8 | 330 | 8 | 317 | 3.73e-43 | 152 |
MS.gene27776.t1 | AT1G15950 | 37.770 | 278 | 157 | 8 | 8 | 283 | 13 | 276 | 4.35e-43 | 150 |
MS.gene27776.t1 | AT1G15950 | 37.410 | 278 | 158 | 7 | 8 | 283 | 13 | 276 | 5.75e-43 | 150 |
MS.gene27776.t1 | AT2G33600 | 35.890 | 326 | 184 | 12 | 4 | 322 | 5 | 312 | 2.56e-42 | 149 |
MS.gene27776.t1 | AT1G09490 | 32.180 | 289 | 184 | 6 | 45 | 330 | 12 | 291 | 1.68e-39 | 141 |
MS.gene27776.t1 | AT1G80820 | 36.786 | 280 | 155 | 9 | 8 | 282 | 8 | 270 | 3.08e-39 | 140 |
MS.gene27776.t1 | AT1G68540 | 36.486 | 222 | 129 | 7 | 113 | 330 | 1 | 214 | 1.42e-33 | 123 |
MS.gene27776.t1 | AT1G09500 | 32.389 | 247 | 156 | 5 | 45 | 287 | 9 | 248 | 5.69e-32 | 121 |
MS.gene27776.t1 | AT2G23910 | 26.452 | 310 | 199 | 11 | 9 | 307 | 11 | 302 | 1.13e-26 | 107 |
MS.gene27776.t1 | AT2G23910 | 26.027 | 292 | 189 | 10 | 1 | 283 | 1 | 274 | 5.78e-25 | 102 |
MS.gene27776.t1 | AT2G23910 | 25.862 | 290 | 188 | 10 | 1 | 281 | 1 | 272 | 1.27e-24 | 101 |
MS.gene27776.t1 | AT4G30470 | 25.490 | 306 | 204 | 10 | 9 | 306 | 11 | 300 | 4.09e-23 | 97.8 |
MS.gene27776.t1 | AT1G15950 | 31.878 | 229 | 142 | 8 | 106 | 330 | 6 | 224 | 4.27e-22 | 93.6 |
MS.gene27776.t1 | AT5G14700 | 27.586 | 319 | 191 | 10 | 8 | 304 | 55 | 355 | 1.85e-21 | 94.0 |
MS.gene27776.t1 | AT4G33360 | 26.056 | 284 | 185 | 6 | 2 | 281 | 9 | 271 | 5.18e-18 | 83.6 |
MS.gene27776.t1 | AT2G23910 | 26.054 | 261 | 166 | 10 | 58 | 307 | 24 | 268 | 6.68e-18 | 82.4 |
MS.gene27776.t1 | AT4G33360 | 26.056 | 284 | 185 | 6 | 2 | 281 | 9 | 271 | 8.25e-18 | 83.6 |
MS.gene27776.t1 | AT5G14700 | 28.632 | 234 | 136 | 7 | 8 | 225 | 55 | 273 | 1.64e-17 | 82.0 |
MS.gene27776.t1 | AT4G33360 | 25.806 | 279 | 182 | 6 | 7 | 281 | 2 | 259 | 3.44e-17 | 81.3 |
Find 65 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGAAATCTGTTCTTGAATT+TGG | 0.142678 | 7.3:-30572795 | MS.gene27776:CDS |
AGTTTACTAGCTTTCTTATT+TGG | 0.183198 | 7.3:-30572684 | MS.gene27776:intron |
CATTGAAAATATTTAGCTTT+TGG | 0.214602 | 7.3:+30573141 | None:intergenic |
GAGCAATTATATCTCCCTTT+TGG | 0.266827 | 7.3:+30572469 | None:intergenic |
AGAGAGCTTATCGGAGTTAA+AGG | 0.285396 | 7.3:-30572258 | MS.gene27776:CDS |
ACTGGAGGTACAGGGTTTAT+TGG | 0.300052 | 7.3:-30575370 | MS.gene27776:CDS |
ATACAATGGATGAAAGTTAT+TGG | 0.306077 | 7.3:-30572887 | MS.gene27776:CDS |
AGAACCATTGATGGAGCATT+AGG | 0.319772 | 7.3:-30573002 | MS.gene27776:CDS |
GATGTTGGCATTTGAAGTTC+AGG | 0.343651 | 7.3:+30572394 | None:intergenic |
CATTTGAAGTTCAGGGTACT+TGG | 0.365683 | 7.3:+30572402 | None:intergenic |
AATTGAATGTTGCAAGGAAA+AGG | 0.371801 | 7.3:-30572148 | MS.gene27776:CDS |
AGCATCCATGAGTTTCTTAG+AGG | 0.383422 | 7.3:+30572215 | None:intergenic |
TCATCTTCTAGAGAGCTTAT+CGG | 0.385289 | 7.3:-30572267 | MS.gene27776:intron |
AAAGGAAGAGTTTGTGTGAC+TGG | 0.394367 | 7.3:-30575388 | MS.gene27776:CDS |
GTACAGGGTTTATTGGTTCA+TGG | 0.397157 | 7.3:-30575363 | MS.gene27776:CDS |
ATTGCTGCATTAAAACTCTC+AGG | 0.400078 | 7.3:+30573104 | None:intergenic |
TCTTTCAGTTCAAAATCAAC+TGG | 0.415670 | 7.3:+30573047 | None:intergenic |
GAGGTTAATTGCGGAAGCTT+AGG | 0.430315 | 7.3:+30572234 | None:intergenic |
GGTACGAGATACAAGCAATA+AGG | 0.431637 | 7.3:+30572552 | None:intergenic |
TCTTCAATAGTTGCAATGAA+TGG | 0.434791 | 7.3:+30572445 | None:intergenic |
CTTGAACATCCTAATCCAAA+AGG | 0.439060 | 7.3:-30572484 | MS.gene27776:CDS |
GTTTGTGTGACTGGAGGTAC+AGG | 0.443705 | 7.3:-30575379 | MS.gene27776:CDS |
AATTCCTAATGCTCCATCAA+TGG | 0.462695 | 7.3:+30572998 | None:intergenic |
ATTAAGAGACTCCTTGAAGA+TGG | 0.464111 | 7.3:-30575337 | MS.gene27776:CDS |
TTCATTTGTCCTAAGCTACC+TGG | 0.469552 | 7.3:-30572717 | MS.gene27776:CDS |
ATGAAAGGTCCTACAACAAA+AGG | 0.476037 | 7.3:+30572735 | None:intergenic |
TAACAACGTAACCATCTTCA+AGG | 0.476578 | 7.3:+30575326 | None:intergenic |
TAGCCTTGACGAAATGTTTG+AGG | 0.478982 | 7.3:-30572175 | MS.gene27776:CDS |
ATTTGGAGAACAACATGGGT+TGG | 0.487832 | 7.3:-30572778 | MS.gene27776:CDS |
CTTGAATTTGGAGAACAACA+TGG | 0.492029 | 7.3:-30572783 | MS.gene27776:CDS |
ATTGAATGTTGCAAGGAAAA+GGG | 0.495429 | 7.3:-30572147 | MS.gene27776:CDS |
AAGAACAGATTTCTCAGCTA+GGG | 0.495734 | 7.3:+30572803 | None:intergenic |
TCTAAGAAACTCATGGATGC+TGG | 0.498821 | 7.3:-30572213 | MS.gene27776:CDS |
TTATTGCTTGTATCTCGTAC+CGG | 0.499138 | 7.3:-30572550 | MS.gene27776:CDS |
GCAGCAATTGAAGGGTGCAT+TGG | 0.503156 | 7.3:-30573089 | MS.gene27776:CDS |
TGAACAGATCCAGGTAGCTT+AGG | 0.503818 | 7.3:+30572708 | None:intergenic |
CAAGAACAGATTTCTCAGCT+AGG | 0.509193 | 7.3:+30572802 | None:intergenic |
ATGTTGGCATTTGAAGTTCA+GGG | 0.512887 | 7.3:+30572395 | None:intergenic |
GTAGTAATGGAAGAAGAGAA+AGG | 0.514620 | 7.3:-30575406 | None:intergenic |
ATTAACCTCTAAGAAACTCA+TGG | 0.523086 | 7.3:-30572220 | MS.gene27776:CDS |
ACACCATACGACCAAGCAAA+AGG | 0.525769 | 7.3:+30572834 | None:intergenic |
GCTTGTATCTCGTACCGGTA+TGG | 0.528101 | 7.3:-30572545 | MS.gene27776:CDS |
AGTAAACTATGAACAGATCC+AGG | 0.532869 | 7.3:+30572699 | None:intergenic |
GCATGTTGATGATGTGGCTA+GGG | 0.545455 | 7.3:-30572521 | MS.gene27776:CDS |
TGTAGAACTCACTTGGATGT+TGG | 0.557000 | 7.3:+30572379 | None:intergenic |
ATCATCAACATGCACCATAC+CGG | 0.559899 | 7.3:+30572531 | None:intergenic |
ACCACTGTTAGAGCTGATCC+AGG | 0.562994 | 7.3:-30575301 | MS.gene27776:intron |
TTGAACATCCTAATCCAAAA+GGG | 0.565903 | 7.3:-30572483 | MS.gene27776:CDS |
TTGAATTTGGAGAACAACAT+GGG | 0.580887 | 7.3:-30572782 | MS.gene27776:CDS |
AGACAAAGAAGAAGATACAA+TGG | 0.599895 | 7.3:-30572901 | MS.gene27776:CDS |
TTGCTGCATTAAAACTCTCA+GGG | 0.608456 | 7.3:+30573105 | None:intergenic |
GGACGCAATTGAATGTTGCA+AGG | 0.609289 | 7.3:-30572154 | MS.gene27776:CDS |
CAGGGTACTTGGAAGAAACA+AGG | 0.616116 | 7.3:+30572413 | None:intergenic |
CGTCCTCAAACATTTCGTCA+AGG | 0.621284 | 7.3:+30572172 | None:intergenic |
TTTGTGTGACTGGAGGTACA+GGG | 0.633409 | 7.3:-30575378 | MS.gene27776:CDS |
ATACACAGCAGAAGCACTTG+AGG | 0.642464 | 7.3:+30572929 | None:intergenic |
TATGGTGCATGTTGATGATG+TGG | 0.643007 | 7.3:-30572527 | MS.gene27776:CDS |
AGTTTCTTAGAGGTTAATTG+CGG | 0.647629 | 7.3:+30572225 | None:intergenic |
TGCATGTTGATGATGTGGCT+AGG | 0.650912 | 7.3:-30572522 | MS.gene27776:CDS |
AAAGGTCCTACAACAAAAGG+TGG | 0.652252 | 7.3:+30572738 | None:intergenic |
ACCTGGATCAGCTCTAACAG+TGG | 0.657128 | 7.3:+30575300 | None:intergenic |
CTGCATTTGGAAGATTTGTG+AGG | 0.662737 | 7.3:+30573165 | None:intergenic |
AATCAACTGGAGTAGCTGTG+TGG | 0.675600 | 7.3:+30573060 | None:intergenic |
GGTAGCTTAGGACAAATGAA+AGG | 0.676303 | 7.3:+30572720 | None:intergenic |
GGAAGAGTTTGTGTGACTGG+AGG | 0.702220 | 7.3:-30575385 | MS.gene27776:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATAAATTAATAATATAT+AGG | + | chr7.3:30573794-30573813 | None:intergenic | 0.0% |
!! | AAAATAATTTAGAAATTTGA+AGG | + | chr7.3:30572780-30572799 | None:intergenic | 10.0% |
!! | AATTATTAGAAAAATTTGAA+TGG | - | chr7.3:30572961-30572980 | MS.gene27776:CDS | 10.0% |
!! | ATAGATATAAAAAATGTTAT+TGG | - | chr7.3:30572919-30572938 | MS.gene27776:CDS | 10.0% |
!! | TAAATTATAAAAATTTCTCT+TGG | - | chr7.3:30572816-30572835 | MS.gene27776:CDS | 10.0% |
!!! | ATAAGATTTAAATAAGTTTT+TGG | - | chr7.3:30572583-30572602 | MS.gene27776:intron | 10.0% |
!!! | ATTTAACTTTTTTTTTAAGA+AGG | + | chr7.3:30572459-30572478 | None:intergenic | 10.0% |
!!! | TTTATTCTATTTTTTTATCT+TGG | + | chr7.3:30572550-30572569 | None:intergenic | 10.0% |
!! | AAAAAAAAAGTTAAATTACC+CGG | - | chr7.3:30572463-30572482 | MS.gene27776:CDS | 15.0% |
!! | AATAAACTACATATTGTTAT+TGG | - | chr7.3:30572293-30572312 | MS.gene27776:intron | 15.0% |
!! | AATAGATGAAAATTAACAAA+TGG | - | chr7.3:30574931-30574950 | MS.gene27776:intron | 15.0% |
!! | AATTAATAATATATAGGTAG+TGG | + | chr7.3:30573788-30573807 | None:intergenic | 15.0% |
!! | TAAAAATGAAACACATTTAT+AGG | - | chr7.3:30573011-30573030 | MS.gene27776:CDS | 15.0% |
!!! | AGTTTTTTTTACTTTCAAAA+AGG | + | chr7.3:30572266-30572285 | None:intergenic | 15.0% |
!!! | ATTGAAAATATTTAGCTTTT+GGG | + | chr7.3:30574398-30574417 | None:intergenic | 15.0% |
!!! | ATTTTGAAGAAAAATTTAGA+CGG | + | chr7.3:30572663-30572682 | None:intergenic | 15.0% |
!!! | CTTTAATTTATCTATTTTGA+AGG | + | chr7.3:30572754-30572773 | None:intergenic | 15.0% |
!!! | GTTTTTTTTACTTTCAAAAA+GGG | + | chr7.3:30572265-30572284 | None:intergenic | 15.0% |
!!! | TTAAATTTTTCTATAGTAGA+TGG | + | chr7.3:30573929-30573948 | None:intergenic | 15.0% |
!!! | TTGGAAAACTTTTTTTTTAA+AGG | - | chr7.3:30572938-30572957 | MS.gene27776:CDS | 15.0% |
!!! | TTTTTTATCTCTATTTTTTC+CGG | + | chr7.3:30572485-30572504 | None:intergenic | 15.0% |
!! | AACATTGTATAATTAGATCA+TGG | + | chr7.3:30573185-30573204 | None:intergenic | 20.0% |
!! | ACATTGTATAATTAGATCAT+GGG | + | chr7.3:30573184-30573203 | None:intergenic | 20.0% |
!! | ATTGTTTGAGAAAAAAATGA+GGG | - | chr7.3:30572986-30573005 | MS.gene27776:CDS | 20.0% |
!! | TATTGTTTGAGAAAAAAATG+AGG | - | chr7.3:30572985-30573004 | MS.gene27776:CDS | 20.0% |
!! | TTAAACAACCTAAGAATATA+TGG | + | chr7.3:30574228-30574247 | None:intergenic | 20.0% |
!!! | AAACCTAAGTATTTTTTAGA+AGG | + | chr7.3:30573544-30573563 | None:intergenic | 20.0% |
!!! | ACTTTTTTACTTTAACACTT+TGG | + | chr7.3:30574113-30574132 | None:intergenic | 20.0% |
!!! | CATTGAAAATATTTAGCTTT+TGG | + | chr7.3:30574399-30574418 | None:intergenic | 20.0% |
!!! | CTTCATCTTTTAAATGTTTT+CGG | - | chr7.3:30572687-30572706 | MS.gene27776:CDS | 20.0% |
!!! | TTTCCTTCTAAAAAATACTT+AGG | - | chr7.3:30573538-30573557 | MS.gene27776:intron | 20.0% |
!!! | TTTTAGTCAAGTTATTAACA+TGG | + | chr7.3:30575204-30575223 | None:intergenic | 20.0% |
!!! | TTTTTATCTCTATTTTTTCC+GGG | + | chr7.3:30572484-30572503 | None:intergenic | 20.0% |
! | AGAAATATGGCTAAAAAGAA+GGG | + | chr7.3:30573317-30573336 | None:intergenic | 25.0% |
! | ATACAATGGATGAAAGTTAT+TGG | - | chr7.3:30574650-30574669 | MS.gene27776:intron | 25.0% |
! | ATATCGTTAGATTCATTACA+TGG | + | chr7.3:30574301-30574320 | None:intergenic | 25.0% |
! | ATCTTTAACTCTTGAATCTA+CGG | - | chr7.3:30574008-30574027 | MS.gene27776:intron | 25.0% |
! | ATTAATATGTAGAACTCACT+TGG | + | chr7.3:30575168-30575187 | None:intergenic | 25.0% |
! | GCTTCATAACTAATAGTATA+GGG | + | chr7.3:30573683-30573702 | None:intergenic | 25.0% |
! | TAGAAATATGGCTAAAAAGA+AGG | + | chr7.3:30573318-30573337 | None:intergenic | 25.0% |
! | TGAGAAATATTTATCAAGGA+GGG | + | chr7.3:30573985-30574004 | None:intergenic | 25.0% |
! | TGCTTCATAACTAATAGTAT+AGG | + | chr7.3:30573684-30573703 | None:intergenic | 25.0% |
! | TGTGTGAGAAATATTTATCA+AGG | + | chr7.3:30573989-30574008 | None:intergenic | 25.0% |
! | TTCTTAGATACAATGAAGTT+TGG | + | chr7.3:30573291-30573310 | None:intergenic | 25.0% |
!! | GTAATTCAAATGTCTTTTAG+TGG | + | chr7.3:30572514-30572533 | None:intergenic | 25.0% |
!! | GTTTAATCAAGTGTGAATTT+TGG | - | chr7.3:30574242-30574261 | MS.gene27776:intron | 25.0% |
!!! | AGTTTACTAGCTTTCTTATT+TGG | - | chr7.3:30574853-30574872 | MS.gene27776:intron | 25.0% |
!!! | CATTGCTCTTTTTAGAAATA+TGG | + | chr7.3:30573330-30573349 | None:intergenic | 25.0% |
AATTGAATGTTGCAAGGAAA+AGG | - | chr7.3:30575389-30575408 | MS.gene27776:CDS | 30.0% | |
ACCACTAATGTAAACAACAT+AGG | - | chr7.3:30573753-30573772 | MS.gene27776:intron | 30.0% | |
ACCTAAGAATATATGGTCTA+TGG | + | chr7.3:30574221-30574240 | None:intergenic | 30.0% | |
ACTGTTTCATCTAAAAAGAC+TGG | + | chr7.3:30573131-30573150 | None:intergenic | 30.0% | |
AGACAAAGAAGAAGATACAA+TGG | - | chr7.3:30574636-30574655 | MS.gene27776:intron | 30.0% | |
AGATACAATGAAGTTTGGTT+GGG | + | chr7.3:30573286-30573305 | None:intergenic | 30.0% | |
AGCGAAATTATGTAAATAGC+AGG | - | chr7.3:30574328-30574347 | MS.gene27776:intron | 30.0% | |
AGTTTCTTAGAGGTTAATTG+CGG | + | chr7.3:30575315-30575334 | None:intergenic | 30.0% | |
ATATAATAGACCCTATCGTT+TGG | - | chr7.3:30573612-30573631 | MS.gene27776:intron | 30.0% | |
ATTATCCAACCAAACTTCAA+GGG | + | chr7.3:30573158-30573177 | None:intergenic | 30.0% | |
ATTGAATGTTGCAAGGAAAA+GGG | - | chr7.3:30575390-30575409 | MS.gene27776:CDS | 30.0% | |
GAGAAATATTTATCAAGGAG+GGG | + | chr7.3:30573984-30574003 | None:intergenic | 30.0% | |
GAGAAATCTGTTCTTGAATT+TGG | - | chr7.3:30574742-30574761 | MS.gene27776:intron | 30.0% | |
GCGAAATTATGTAAATAGCA+GGG | - | chr7.3:30574329-30574348 | MS.gene27776:intron | 30.0% | |
GTGAGAAATATTTATCAAGG+AGG | + | chr7.3:30573986-30574005 | None:intergenic | 30.0% | |
TAGATACAATGAAGTTTGGT+TGG | + | chr7.3:30573287-30573306 | None:intergenic | 30.0% | |
TCAAGTTATTAACATGGAGA+AGG | + | chr7.3:30575198-30575217 | None:intergenic | 30.0% | |
TCCATAGACCATATATTCTT+AGG | - | chr7.3:30574217-30574236 | MS.gene27776:intron | 30.0% | |
TCTTCAATAGTTGCAATGAA+TGG | + | chr7.3:30575095-30575114 | None:intergenic | 30.0% | |
TCTTTCAGTTCAAAATCAAC+TGG | + | chr7.3:30574493-30574512 | None:intergenic | 30.0% | |
TTGAACATCCTAATCCAAAA+GGG | - | chr7.3:30575054-30575073 | MS.gene27776:intron | 30.0% | |
TTGAATTTGGAGAACAACAT+GGG | - | chr7.3:30574755-30574774 | MS.gene27776:intron | 30.0% | |
TTTACTTTAACACTTTGGAC+CGG | + | chr7.3:30574108-30574127 | None:intergenic | 30.0% | |
! | AGTCTTTTTAGATGAAACAG+TGG | - | chr7.3:30573130-30573149 | MS.gene27776:CDS | 30.0% |
! | ATTAACCTCTAAGAAACTCA+TGG | - | chr7.3:30575317-30575336 | MS.gene27776:CDS | 30.0% |
! | TCCTATGTTGTTTACATTAG+TGG | + | chr7.3:30573757-30573776 | None:intergenic | 30.0% |
! | TTATATCTCCCTTTTGGATT+AGG | + | chr7.3:30575065-30575084 | None:intergenic | 30.0% |
!! | AGTTTTAATGCAGCAATTGA+AGG | - | chr7.3:30574439-30574458 | MS.gene27776:intron | 30.0% |
!! | GTTTTAATGCAGCAATTGAA+GGG | - | chr7.3:30574440-30574459 | MS.gene27776:intron | 30.0% |
!!! | AGAATTTTTCAAGACACAGT+TGG | + | chr7.3:30573490-30573509 | None:intergenic | 30.0% |
AAATGAGTTATGCATGCATG+TGG | - | chr7.3:30573250-30573269 | MS.gene27776:intron | 35.0% | |
AACAAATGGAAGTTGCATTC+AGG | - | chr7.3:30574945-30574964 | MS.gene27776:intron | 35.0% | |
AAGAACAGATTTCTCAGCTA+GGG | + | chr7.3:30574737-30574756 | None:intergenic | 35.0% | |
AATATATGGTCTATGGAGCA+CGG | + | chr7.3:30574214-30574233 | None:intergenic | 35.0% | |
AATATGTTCGACCAAACGAT+AGG | + | chr7.3:30573626-30573645 | None:intergenic | 35.0% | |
AATGAGTTATGCATGCATGT+GGG | - | chr7.3:30573251-30573270 | MS.gene27776:intron | 35.0% | |
AATTCCTAATGCTCCATCAA+TGG | + | chr7.3:30574542-30574561 | None:intergenic | 35.0% | |
ACACCTATATAACACTTCGT+TGG | + | chr7.3:30574079-30574098 | None:intergenic | 35.0% | |
AGTAAACTATGAACAGATCC+AGG | + | chr7.3:30574841-30574860 | None:intergenic | 35.0% | |
ATAATCCAAGAACGTACCAA+TGG | + | chr7.3:30574893-30574912 | None:intergenic | 35.0% | |
ATATGTTCGACCAAACGATA+GGG | + | chr7.3:30573625-30573644 | None:intergenic | 35.0% | |
ATGAAAGGTCCTACAACAAA+AGG | + | chr7.3:30574805-30574824 | None:intergenic | 35.0% | |
ATTAAGAGACTCCTTGAAGA+TGG | - | chr7.3:30572200-30572219 | MS.gene27776:CDS | 35.0% | |
ATTGCTGCATTAAAACTCTC+AGG | + | chr7.3:30574436-30574455 | None:intergenic | 35.0% | |
CATTATCCAACCAAACTTCA+AGG | + | chr7.3:30573159-30573178 | None:intergenic | 35.0% | |
CTTGAACATCCTAATCCAAA+AGG | - | chr7.3:30575053-30575072 | MS.gene27776:intron | 35.0% | |
CTTGAATTTGGAGAACAACA+TGG | - | chr7.3:30574754-30574773 | MS.gene27776:intron | 35.0% | |
GTGACAAAAAGAACCATTGA+TGG | - | chr7.3:30574526-30574545 | MS.gene27776:intron | 35.0% | |
TAACAACGTAACCATCTTCA+AGG | + | chr7.3:30572214-30572233 | None:intergenic | 35.0% | |
TAATCCAAGAACGTACCAAT+GGG | + | chr7.3:30574892-30574911 | None:intergenic | 35.0% | |
TACTTTCAAAAAGGGTTACC+TGG | + | chr7.3:30572257-30572276 | None:intergenic | 35.0% | |
TTATTGCTTGTATCTCGTAC+CGG | - | chr7.3:30574987-30575006 | MS.gene27776:intron | 35.0% | |
TTGCTGCATTAAAACTCTCA+GGG | + | chr7.3:30574435-30574454 | None:intergenic | 35.0% | |
! | ACGAAGTGTTATATAGGTGT+CGG | - | chr7.3:30574079-30574098 | MS.gene27776:intron | 35.0% |
! | ATGTTGGCATTTGAAGTTCA+GGG | + | chr7.3:30575145-30575164 | None:intergenic | 35.0% |
! | CTTTTTGTCACTATTTCCTC+TGG | + | chr7.3:30574517-30574536 | None:intergenic | 35.0% |
! | GAGCAATTATATCTCCCTTT+TGG | + | chr7.3:30575071-30575090 | None:intergenic | 35.0% |
! | TCATCTTCTAGAGAGCTTAT+CGG | - | chr7.3:30575270-30575289 | MS.gene27776:intron | 35.0% |
! | TGTCCAACGAAGTGTTATAT+AGG | - | chr7.3:30574073-30574092 | MS.gene27776:intron | 35.0% |
! | TTTTGAACTGAAAGAACCAG+AGG | - | chr7.3:30574498-30574517 | MS.gene27776:intron | 35.0% |
AAAGGAAGAGTTTGTGTGAC+TGG | - | chr7.3:30572149-30572168 | MS.gene27776:CDS | 40.0% | |
AAAGGTCCTACAACAAAAGG+TGG | + | chr7.3:30574802-30574821 | None:intergenic | 40.0% | |
AGAGAGCTTATCGGAGTTAA+AGG | - | chr7.3:30575279-30575298 | MS.gene27776:intron | 40.0% | |
AGCATCCATGAGTTTCTTAG+AGG | + | chr7.3:30575325-30575344 | None:intergenic | 40.0% | |
ATCATCAACATGCACCATAC+CGG | + | chr7.3:30575009-30575028 | None:intergenic | 40.0% | |
ATGAGTTATGCATGCATGTG+GGG | - | chr7.3:30573252-30573271 | MS.gene27776:intron | 40.0% | |
ATTTGGAGAACAACATGGGT+TGG | - | chr7.3:30574759-30574778 | MS.gene27776:intron | 40.0% | |
CAAGAACAGATTTCTCAGCT+AGG | + | chr7.3:30574738-30574757 | None:intergenic | 40.0% | |
CATATCGTACGAGTGTCATA+TGG | - | chr7.3:30574152-30574171 | MS.gene27776:intron | 40.0% | |
CTATTTGCCACAATTCAAGG+AGG | - | chr7.3:30573414-30573433 | MS.gene27776:intron | 40.0% | |
CTGCATTTGGAAGATTTGTG+AGG | + | chr7.3:30574375-30574394 | None:intergenic | 40.0% | |
GCACTATTTGCCACAATTCA+AGG | - | chr7.3:30573411-30573430 | MS.gene27776:intron | 40.0% | |
GGCAAATAGTGCATTGTGAT+TGG | + | chr7.3:30573403-30573422 | None:intergenic | 40.0% | |
GGTAAGTGAAAGTTTCCCAT+TGG | - | chr7.3:30574874-30574893 | MS.gene27776:intron | 40.0% | |
GGTACGAGATACAAGCAATA+AGG | + | chr7.3:30574988-30575007 | None:intergenic | 40.0% | |
GGTAGCTTAGGACAAATGAA+AGG | + | chr7.3:30574820-30574839 | None:intergenic | 40.0% | |
TCTAAGAAACTCATGGATGC+TGG | - | chr7.3:30575324-30575343 | MS.gene27776:CDS | 40.0% | |
TGTAGAACTCACTTGGATGT+TGG | + | chr7.3:30575161-30575180 | None:intergenic | 40.0% | |
TGTGGCTGAAAAATAGGAAG+TGG | - | chr7.3:30573437-30573456 | MS.gene27776:intron | 40.0% | |
TTCATTTGTCCTAAGCTACC+TGG | - | chr7.3:30574820-30574839 | MS.gene27776:intron | 40.0% | |
! | AGAACCATTGATGGAGCATT+AGG | - | chr7.3:30574535-30574554 | MS.gene27776:intron | 40.0% |
! | CATTTGAAGTTCAGGGTACT+TGG | + | chr7.3:30575138-30575157 | None:intergenic | 40.0% |
! | GATGTTGGCATTTGAAGTTC+AGG | + | chr7.3:30575146-30575165 | None:intergenic | 40.0% |
! | TAGCCTTGACGAAATGTTTG+AGG | - | chr7.3:30575362-30575381 | MS.gene27776:CDS | 40.0% |
!! | CTTGTACCACCTTTTGTTGT+AGG | - | chr7.3:30574793-30574812 | MS.gene27776:intron | 40.0% |
!! | GTACAGGGTTTATTGGTTCA+TGG | - | chr7.3:30572174-30572193 | MS.gene27776:CDS | 40.0% |
!! | TATGGTGCATGTTGATGATG+TGG | - | chr7.3:30575010-30575029 | MS.gene27776:intron | 40.0% |
!!! | GAACTTTGAAGCCTTTTGCT+TGG | - | chr7.3:30574692-30574711 | MS.gene27776:intron | 40.0% |
!!! | TTTAGCTTTTGGGCTGCATT+TGG | + | chr7.3:30574388-30574407 | None:intergenic | 40.0% |
AATCAACTGGAGTAGCTGTG+TGG | + | chr7.3:30574480-30574499 | None:intergenic | 45.0% | |
ACACCATACGACCAAGCAAA+AGG | + | chr7.3:30574706-30574725 | None:intergenic | 45.0% | |
ACAGTGGTACCCTTGAAGTT+TGG | - | chr7.3:30573146-30573165 | MS.gene27776:CDS | 45.0% | |
ACTCTTGAATCTACGGTGTG+TGG | - | chr7.3:30574015-30574034 | MS.gene27776:intron | 45.0% | |
CGTCCTCAAACATTTCGTCA+AGG | + | chr7.3:30575368-30575387 | None:intergenic | 45.0% | |
GAGGTTAATTGCGGAAGCTT+AGG | + | chr7.3:30575306-30575325 | None:intergenic | 45.0% | |
GGACGCAATTGAATGTTGCA+AGG | - | chr7.3:30575383-30575402 | MS.gene27776:CDS | 45.0% | |
GTTTCCCATTGGTACGTTCT+TGG | - | chr7.3:30574885-30574904 | MS.gene27776:intron | 45.0% | |
TACGAGTGTCATATGGTGTC+AGG | - | chr7.3:30574159-30574178 | MS.gene27776:intron | 45.0% | |
TGAACAGATCCAGGTAGCTT+AGG | + | chr7.3:30574832-30574851 | None:intergenic | 45.0% | |
TGGTACCCTTGAAGTTTGGT+TGG | - | chr7.3:30573150-30573169 | MS.gene27776:CDS | 45.0% | |
! | AAGCCTTTTGCTTGGTCGTA+TGG | - | chr7.3:30574700-30574719 | MS.gene27776:intron | 45.0% |
! | ACTGGAGGTACAGGGTTTAT+TGG | - | chr7.3:30572167-30572186 | MS.gene27776:CDS | 45.0% |
! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr7.3:30573431-30573450 | MS.gene27776:intron | 45.0% |
! | CAGGGTACTTGGAAGAAACA+AGG | + | chr7.3:30575127-30575146 | None:intergenic | 45.0% |
! | TTTGTGTGACTGGAGGTACA+GGG | - | chr7.3:30572159-30572178 | MS.gene27776:CDS | 45.0% |
!! | ATACACAGCAGAAGCACTTG+AGG | + | chr7.3:30574611-30574630 | None:intergenic | 45.0% |
!! | GCATGTTGATGATGTGGCTA+GGG | - | chr7.3:30575016-30575035 | MS.gene27776:intron | 45.0% |
!! | GTTATATAGGTGTCGGACAC+CGG | - | chr7.3:30574086-30574105 | MS.gene27776:intron | 45.0% |
!! | TGCATGTTGATGATGTGGCT+AGG | - | chr7.3:30575015-30575034 | MS.gene27776:intron | 45.0% |
!! | ATATTTCTTAAAAAATATAT+TGG | + | chr7.3:30573654-30573673 | None:intergenic | 5.0% |
!! | TATTTCTTAAAAAATATATT+GGG | + | chr7.3:30573653-30573672 | None:intergenic | 5.0% |
ACCACTGTTAGAGCTGATCC+AGG | - | chr7.3:30572236-30572255 | MS.gene27776:CDS | 50.0% | |
AGCCACACCTCCTTGAATTG+TGG | + | chr7.3:30573424-30573443 | None:intergenic | 50.0% | |
GGAAGAGTTTGTGTGACTGG+AGG | - | chr7.3:30572152-30572171 | MS.gene27776:CDS | 50.0% | |
GTCATGTCAGGTGTCTACGT+CGG | + | chr7.3:30573713-30573732 | None:intergenic | 50.0% | |
TATGGAGCACGGACATCTCT+AGG | + | chr7.3:30574203-30574222 | None:intergenic | 50.0% | |
TGCCACAATTCAAGGAGGTG+TGG | - | chr7.3:30573419-30573438 | MS.gene27776:intron | 50.0% | |
! | ACCTGGATCAGCTCTAACAG+TGG | + | chr7.3:30572240-30572259 | None:intergenic | 50.0% |
! | GCAGCAATTGAAGGGTGCAT+TGG | - | chr7.3:30574448-30574467 | MS.gene27776:intron | 50.0% |
! | GCTTGTATCTCGTACCGGTA+TGG | - | chr7.3:30574992-30575011 | MS.gene27776:intron | 50.0% |
! | GTTTGTGTGACTGGAGGTAC+AGG | - | chr7.3:30572158-30572177 | MS.gene27776:CDS | 50.0% |
! | TGGTGTCAACGTGTCTGTGT+CGG | + | chr7.3:30573737-30573756 | None:intergenic | 50.0% |
!! | CTCTAGGATTACACGTGTCG+CGG | + | chr7.3:30574187-30574206 | None:intergenic | 50.0% |
!! | GTCTGTGTCGGTGTCATGTC+AGG | + | chr7.3:30573725-30573744 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 30572137 | 30575422 | 30572137 | ID=MS.gene27776 |
chr7.3 | mRNA | 30572137 | 30575422 | 30572137 | ID=MS.gene27776.t1;Parent=MS.gene27776 |
chr7.3 | exon | 30575302 | 30575422 | 30575302 | ID=MS.gene27776.t1.exon1;Parent=MS.gene27776.t1 |
chr7.3 | CDS | 30575302 | 30575422 | 30575302 | ID=cds.MS.gene27776.t1;Parent=MS.gene27776.t1 |
chr7.3 | exon | 30572685 | 30573212 | 30572685 | ID=MS.gene27776.t1.exon2;Parent=MS.gene27776.t1 |
chr7.3 | CDS | 30572685 | 30573212 | 30572685 | ID=cds.MS.gene27776.t1;Parent=MS.gene27776.t1 |
chr7.3 | exon | 30572391 | 30572592 | 30572391 | ID=MS.gene27776.t1.exon3;Parent=MS.gene27776.t1 |
chr7.3 | CDS | 30572391 | 30572592 | 30572391 | ID=cds.MS.gene27776.t1;Parent=MS.gene27776.t1 |
chr7.3 | exon | 30572137 | 30572278 | 30572137 | ID=MS.gene27776.t1.exon4;Parent=MS.gene27776.t1 |
chr7.3 | CDS | 30572137 | 30572278 | 30572137 | ID=cds.MS.gene27776.t1;Parent=MS.gene27776.t1 |
Gene Sequence |
Protein sequence |