Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28507.t1 | XP_003629519.1 | 97.4 | 535 | 10 | 1 | 1 | 535 | 1 | 531 | 2.50E-264 | 921 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28507.t1 | Q8W4F0 | 71.7 | 562 | 123 | 5 | 1 | 535 | 1 | 553 | 3.0e-197 | 689.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28507.t1 | G7LFK8 | 97.4 | 535 | 10 | 1 | 1 | 535 | 1 | 531 | 1.8e-264 | 921.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene28507.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051525 | MS.gene28507 | 0.825186 | 5.38E-54 | -1.69E-46 |
| MS.gene051568 | MS.gene28507 | 0.833175 | 6.20E-56 | -1.69E-46 |
| MS.gene051588 | MS.gene28507 | 0.831638 | 1.49E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene28507 | -0.811302 | 7.49E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene28507 | 0.815618 | 8.43E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene28507 | 0.808402 | 3.15E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene28507 | 0.830614 | 2.66E-55 | -1.69E-46 |
| MS.gene054920 | MS.gene28507 | 0.850891 | 1.27E-60 | -1.69E-46 |
| MS.gene057476 | MS.gene28507 | 0.801792 | 7.62E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene28507 | 0.80962 | 1.73E-50 | -1.69E-46 |
| MS.gene058935 | MS.gene28507 | 0.807844 | 4.14E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene28507 | 0.812503 | 4.10E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene28507 | 0.800722 | 1.26E-48 | -1.69E-46 |
| MS.gene059958 | MS.gene28507 | 0.821124 | 4.77E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28507.t1 | MTR_8g078410 | 96.449 | 535 | 15 | 1 | 1 | 535 | 1 | 531 | 0.0 | 1070 |
| MS.gene28507.t1 | MTR_5g018900 | 75.933 | 536 | 116 | 5 | 1 | 535 | 1 | 524 | 0.0 | 808 |
| MS.gene28507.t1 | MTR_1g021835 | 57.836 | 536 | 157 | 9 | 1 | 535 | 1 | 468 | 0.0 | 582 |
| MS.gene28507.t1 | MTR_5g081160 | 65.416 | 373 | 119 | 3 | 163 | 535 | 141 | 503 | 3.43e-175 | 504 |
| MS.gene28507.t1 | MTR_3g069410 | 57.047 | 447 | 172 | 6 | 105 | 535 | 70 | 512 | 7.65e-166 | 480 |
| MS.gene28507.t1 | MTR_1g021835 | 56.941 | 425 | 122 | 8 | 1 | 424 | 1 | 365 | 6.72e-159 | 459 |
| MS.gene28507.t1 | MTR_1g021835 | 54.133 | 375 | 112 | 7 | 1 | 371 | 1 | 319 | 1.09e-129 | 381 |
| MS.gene28507.t1 | MTR_5g018910 | 63.441 | 93 | 33 | 1 | 156 | 247 | 488 | 580 | 1.46e-34 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28507.t1 | AT4G36860 | 67.972 | 562 | 144 | 5 | 1 | 535 | 1 | 553 | 0.0 | 733 |
| MS.gene28507.t1 | AT4G36860 | 65.299 | 585 | 145 | 5 | 1 | 535 | 1 | 577 | 0.0 | 724 |
| MS.gene28507.t1 | AT4G36860 | 66.519 | 451 | 121 | 4 | 1 | 424 | 1 | 448 | 0.0 | 585 |
| MS.gene28507.t1 | AT1G19270 | 53.097 | 565 | 201 | 8 | 1 | 535 | 1 | 531 | 0.0 | 572 |
| MS.gene28507.t1 | AT1G19270 | 53.097 | 565 | 201 | 8 | 1 | 535 | 1 | 531 | 0.0 | 572 |
| MS.gene28507.t1 | AT2G39830 | 59.020 | 449 | 155 | 7 | 111 | 535 | 75 | 518 | 0.0 | 522 |
| MS.gene28507.t1 | AT2G39830 | 66.220 | 373 | 121 | 3 | 163 | 535 | 160 | 527 | 1.83e-179 | 516 |
| MS.gene28507.t1 | AT2G39830 | 65.691 | 376 | 121 | 4 | 163 | 535 | 160 | 530 | 2.71e-177 | 510 |
| MS.gene28507.t1 | AT5G66610 | 44.444 | 513 | 248 | 11 | 28 | 529 | 65 | 551 | 3.97e-134 | 401 |
| MS.gene28507.t1 | AT2G39830 | 65.233 | 279 | 94 | 3 | 163 | 440 | 160 | 436 | 5.15e-133 | 394 |
| MS.gene28507.t1 | AT5G66610 | 48.826 | 426 | 196 | 8 | 111 | 529 | 14 | 424 | 8.49e-131 | 388 |
| MS.gene28507.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 170 | 640 | 7.65e-129 | 390 |
| MS.gene28507.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 161 | 631 | 8.88e-129 | 390 |
| MS.gene28507.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 161 | 631 | 8.88e-129 | 390 |
| MS.gene28507.t1 | AT5G66610 | 42.222 | 540 | 248 | 12 | 28 | 529 | 65 | 578 | 2.94e-128 | 387 |
| MS.gene28507.t1 | AT5G17890 | 51.309 | 382 | 174 | 6 | 159 | 535 | 1234 | 1608 | 1.83e-112 | 366 |
| MS.gene28507.t1 | AT5G66630 | 47.989 | 373 | 176 | 7 | 159 | 528 | 341 | 698 | 5.23e-109 | 340 |
| MS.gene28507.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 89 | 438 | 1.63e-100 | 311 |
| MS.gene28507.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 89 | 438 | 1.63e-100 | 311 |
| MS.gene28507.t1 | AT5G66640 | 45.063 | 395 | 180 | 10 | 141 | 528 | 106 | 470 | 3.09e-100 | 311 |
| MS.gene28507.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 120 | 469 | 4.33e-100 | 311 |
| MS.gene28507.t1 | AT5G66640 | 49.691 | 324 | 154 | 7 | 212 | 528 | 10 | 331 | 5.79e-96 | 295 |
| MS.gene28507.t1 | AT5G66640 | 43.220 | 354 | 186 | 9 | 182 | 528 | 121 | 466 | 4.21e-83 | 266 |
| MS.gene28507.t1 | AT5G66640 | 43.220 | 354 | 186 | 9 | 182 | 528 | 120 | 465 | 5.02e-83 | 266 |
| MS.gene28507.t1 | AT5G66620 | 38.810 | 353 | 191 | 10 | 44 | 390 | 161 | 494 | 1.22e-72 | 240 |
Find 118 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCTTATAGCATAATTTA+TGG | 0.189171 | 8.4:-28265554 | None:intergenic |
| AGTATAGAGCACATCCTTTC+TGG | 0.193526 | 8.4:+28266083 | MS.gene28507:CDS |
| ATCCTCGTCCTGAATGTTTA+TGG | 0.214368 | 8.4:-28264159 | None:intergenic |
| CATGCTTGGCTTAGACTTAA+AGG | 0.236159 | 8.4:+28267226 | MS.gene28507:CDS |
| GTGTCTCGATTCGGCTATTA+TGG | 0.241072 | 8.4:+28266351 | MS.gene28507:CDS |
| AACCAGGCAGTGCTCAAGTA+TGG | 0.287660 | 8.4:+28267604 | MS.gene28507:CDS |
| CATATTCCTTCTTCAACTTC+AGG | 0.292654 | 8.4:-28267355 | None:intergenic |
| CATCGACGTATCAGCCTAAA+AGG | 0.297552 | 8.4:-28266855 | None:intergenic |
| CATTCAGGACGAGGATATAC+TGG | 0.299155 | 8.4:+28264166 | MS.gene28507:CDS |
| CGAGGATATACTGGGAAATA+TGG | 0.301890 | 8.4:+28264175 | MS.gene28507:CDS |
| GTCCTCTGGTTTCAGGTAAA+TGG | 0.302701 | 8.4:-28266648 | None:intergenic |
| AAGCAAAGTCCTCTGGTTTC+AGG | 0.302816 | 8.4:-28266655 | None:intergenic |
| GCAGCAAATTCCTATGCTTT+TGG | 0.308444 | 8.4:+28266444 | MS.gene28507:CDS |
| AACTTCCGGTCATTCGGATA+TGG | 0.336770 | 8.4:-28267645 | None:intergenic |
| TCATTACAGTATTCCATGTC+TGG | 0.337779 | 8.4:+28265519 | MS.gene28507:intron |
| GGCGAAAAGAGGTTTGTAAA+AGG | 0.349058 | 8.4:-28264949 | None:intergenic |
| ACCAAGTTCCTTCTCAAAAT+CGG | 0.357058 | 8.4:-28267515 | None:intergenic |
| TGATGATGCTTCTTCACTTC+CGG | 0.357113 | 8.4:-28267425 | None:intergenic |
| TTACCATAAATTATGCTATA+AGG | 0.387755 | 8.4:+28265551 | MS.gene28507:CDS |
| GTTCGAACCCTTTAGAAACT+TGG | 0.408812 | 8.4:-28264137 | None:intergenic |
| TGCTTCTTCACTTCCGGAGC+CGG | 0.411249 | 8.4:-28267419 | None:intergenic |
| TTAGATTCAGAGATCTATTC+CGG | 0.411303 | 8.4:+28267400 | MS.gene28507:CDS |
| GGTTCGAACCATAAACATTC+AGG | 0.417018 | 8.4:+28264151 | MS.gene28507:CDS |
| CTGGCTTACCAAGTTTCTAA+AGG | 0.419265 | 8.4:+28264129 | MS.gene28507:CDS |
| GTTACAGAGGAAGATCATAA+AGG | 0.421978 | 8.4:+28264408 | MS.gene28507:CDS |
| GTGAGCTATCTGTCTCAATC+TGG | 0.433359 | 8.4:-28267552 | None:intergenic |
| ATGGAAAACTTCCGGTCATT+CGG | 0.433899 | 8.4:-28267651 | None:intergenic |
| TCGCATAGTTACCTGTATAC+AGG | 0.438440 | 8.4:-28264970 | None:intergenic |
| GCTGGCTGCAATGCCGAGAT+TGG | 0.442433 | 8.4:+28265250 | MS.gene28507:CDS |
| TTCTGACAAGCAAAGTCCTC+TGG | 0.446916 | 8.4:-28266662 | None:intergenic |
| TGGCTTACCAAGTTTCTAAA+GGG | 0.451933 | 8.4:+28264130 | MS.gene28507:CDS |
| TTACAGAGGAAGATCATAAA+GGG | 0.469977 | 8.4:+28264409 | MS.gene28507:CDS |
| GAAAATAAGATTGTATGGGC+TGG | 0.473993 | 8.4:+28264110 | None:intergenic |
| ATTTCATTATGGAAAACTTC+CGG | 0.475409 | 8.4:-28267659 | None:intergenic |
| TTCCTCTACATCTTCAAAGA+AGG | 0.477132 | 8.4:+28267483 | MS.gene28507:CDS |
| CGAACCTCGTAATCAGTGAT+TGG | 0.478079 | 8.4:-28265346 | None:intergenic |
| CATCTTCAAAGAAGGGTAAA+CGG | 0.478692 | 8.4:+28267491 | MS.gene28507:CDS |
| AAGGCCATACAAAACAAGTA+TGG | 0.479856 | 8.4:-28266889 | None:intergenic |
| AGGAAGATGAACAACTTGCC+AGG | 0.481242 | 8.4:+28264863 | MS.gene28507:CDS |
| CTCATGAAATGATGCATGCT+TGG | 0.482818 | 8.4:+28267212 | MS.gene28507:CDS |
| TGATTGGAAGTTTGCAAGCA+TGG | 0.482821 | 8.4:-28265330 | None:intergenic |
| CAAACTTTCTTGAATTGCCC+TGG | 0.485539 | 8.4:-28264881 | None:intergenic |
| CCATGTTGCTAAAATTCAAC+AGG | 0.488050 | 8.4:+28264807 | MS.gene28507:CDS |
| CGGTAGCCTGCTCCTATACT+TGG | 0.493239 | 8.4:-28266810 | None:intergenic |
| GTATTTCAAGATAGAGAGGT+TGG | 0.497395 | 8.4:-28266387 | None:intergenic |
| TCAGAGATCTATTCCGGCTC+CGG | 0.497689 | 8.4:+28267406 | MS.gene28507:CDS |
| TGAGTTGCATGGGAGCTGTA+TGG | 0.499390 | 8.4:+28265287 | MS.gene28507:CDS |
| TTATAGCATAATTTATGGTA+AGG | 0.500224 | 8.4:-28265549 | None:intergenic |
| GTGCCATCGCGCTCGTGTGA+TGG | 0.502362 | 8.4:-28266121 | None:intergenic |
| GTGTCTTGAGTGTCTCGATT+CGG | 0.506058 | 8.4:+28266342 | MS.gene28507:CDS |
| ACAGATAGCTCACCAGCCTA+TGG | 0.509351 | 8.4:+28267562 | MS.gene28507:CDS |
| GCCCATACTTGAGCACTGCC+TGG | 0.512523 | 8.4:-28267606 | None:intergenic |
| ATATGGACACGACAGAGATT+CGG | 0.513953 | 8.4:+28264192 | MS.gene28507:CDS |
| TATATTTATAGGTTACTGAC+AGG | 0.516589 | 8.4:+28267178 | MS.gene28507:intron |
| TGGATTTAGAGAGGGTAACC+AGG | 0.516593 | 8.4:+28267588 | MS.gene28507:CDS |
| CAGATCCCACAAAATTCAGC+TGG | 0.520653 | 8.4:+28266052 | MS.gene28507:intron |
| TTGTTGTAGCTGTCAAAGAA+TGG | 0.521248 | 8.4:+28266150 | MS.gene28507:CDS |
| CATTACAGTATTCCATGTCT+GGG | 0.527623 | 8.4:+28265520 | MS.gene28507:intron |
| AAACCTTCCATGGCCAATCT+CGG | 0.530954 | 8.4:-28265263 | None:intergenic |
| AGGAGACCAAGTATAGGAGC+AGG | 0.531668 | 8.4:+28266804 | MS.gene28507:CDS |
| CTAAATCCATCTCCATAGGC+TGG | 0.535720 | 8.4:-28267574 | None:intergenic |
| AGCTCACCAGCCTATGGAGA+TGG | 0.537937 | 8.4:+28267568 | MS.gene28507:CDS |
| CTGAGGCCTGAAGTTGAAGA+AGG | 0.538408 | 8.4:+28267349 | MS.gene28507:CDS |
| CATGCATCATTTCATGAGCT+AGG | 0.540468 | 8.4:-28267207 | None:intergenic |
| ACCTGTATACAGGCGAAAAG+AGG | 0.540632 | 8.4:-28264960 | None:intergenic |
| TCTTGCAAACATCACACCTT+GGG | 0.542837 | 8.4:-28265584 | None:intergenic |
| TGCTCAAGTATGGGCTTAGA+CGG | 0.544906 | 8.4:+28267614 | MS.gene28507:CDS |
| AGAAGGAATATGCCAAGTCT+TGG | 0.551472 | 8.4:+28267366 | MS.gene28507:CDS |
| ACCACATATGAGCCAAGACT+TGG | 0.555232 | 8.4:-28267378 | None:intergenic |
| GCTGATGTTGAACAAAATGA+AGG | 0.556484 | 8.4:+28264781 | MS.gene28507:CDS |
| ATGCCGAGATTGGCCATGGA+AGG | 0.556967 | 8.4:+28265260 | MS.gene28507:CDS |
| ACCAGGCAGTGCTCAAGTAT+GGG | 0.557753 | 8.4:+28267605 | MS.gene28507:CDS |
| ACCCTTCTTTGAAGATGTAG+AGG | 0.559513 | 8.4:-28267485 | None:intergenic |
| TCCTCTACATCTTCAAAGAA+GGG | 0.564606 | 8.4:+28267484 | MS.gene28507:CDS |
| GCCAAGTCTTGGCTCATATG+TGG | 0.565359 | 8.4:+28267377 | MS.gene28507:CDS |
| CTTGACCATATCCGAATGAC+CGG | 0.569122 | 8.4:+28267640 | MS.gene28507:CDS |
| TGTGCTTGCAGAATCTGTGC+TGG | 0.570167 | 8.4:+28265232 | MS.gene28507:intron |
| CTCTCTAAATCCATCTCCAT+AGG | 0.573587 | 8.4:-28267578 | None:intergenic |
| ATCTTGCAAACATCACACCT+TGG | 0.577586 | 8.4:-28265585 | None:intergenic |
| TTCTTTGAAGATGTAGAGGA+AGG | 0.578442 | 8.4:-28267481 | None:intergenic |
| TCTTTCAGAGGTTACAGAGG+AGG | 0.581657 | 8.4:+28264386 | MS.gene28507:CDS |
| AAGTATCTGTTGCTTGATGA+CGG | 0.585206 | 8.4:+28266310 | MS.gene28507:CDS |
| TCTTGTATTTCAAGATAGAG+AGG | 0.585747 | 8.4:-28266391 | None:intergenic |
| ATTCAAGAAAGTTTGAGCGT+TGG | 0.587908 | 8.4:+28264889 | MS.gene28507:CDS |
| TGCAATGCCGAGATTGGCCA+TGG | 0.592397 | 8.4:+28265256 | MS.gene28507:CDS |
| GAATCAGTTTGAGACGGAGG+AGG | 0.593085 | 8.4:-28264916 | None:intergenic |
| AATTGCGATCTCTCTTTCAG+AGG | 0.593587 | 8.4:+28264374 | MS.gene28507:CDS |
| TGTCTCTCAACCAAAAGCAT+AGG | 0.601813 | 8.4:-28266454 | None:intergenic |
| ACAAGCACTAAATGAAGCCA+TGG | 0.603423 | 8.4:+28266474 | MS.gene28507:CDS |
| CTCTCTTTCAGAGGTTACAG+AGG | 0.604714 | 8.4:+28264383 | MS.gene28507:CDS |
| AATATAGAATCAGTTTGAGA+CGG | 0.606429 | 8.4:-28264922 | None:intergenic |
| CGACAGGCTATGGGAATCTG+AGG | 0.609358 | 8.4:+28267332 | MS.gene28507:intron |
| AGATTCTGAATCTGAAGATG+AGG | 0.610392 | 8.4:+28264720 | MS.gene28507:CDS |
| TCATCTTCCTCGTCATCAAG+TGG | 0.612402 | 8.4:-28264751 | None:intergenic |
| ATAAGGAGCTGCATCACCCA+AGG | 0.612966 | 8.4:+28265568 | MS.gene28507:CDS |
| CTATGGAGATGGATTTAGAG+AGG | 0.615579 | 8.4:+28267579 | MS.gene28507:CDS |
| CTGATGTTGAACAAAATGAA+GGG | 0.615941 | 8.4:+28264782 | MS.gene28507:CDS |
| GTAAGGACGATTCCCAGACA+TGG | 0.624532 | 8.4:-28265532 | None:intergenic |
| GGAAGATGAACAACTTGCCA+GGG | 0.625754 | 8.4:+28264864 | MS.gene28507:CDS |
| CAGTTATCATATCGATGACA+CGG | 0.628026 | 8.4:-28266830 | None:intergenic |
| AACCATAAACATTCAGGACG+AGG | 0.628809 | 8.4:+28264157 | MS.gene28507:CDS |
| ATTCAGGACGAGGATATACT+GGG | 0.630545 | 8.4:+28264167 | MS.gene28507:CDS |
| TGTTGACGAAGTTCAACTTG+AGG | 0.636560 | 8.4:+28264843 | MS.gene28507:CDS |
| TATGGAGATGGATTTAGAGA+GGG | 0.638780 | 8.4:+28267580 | MS.gene28507:CDS |
| TATCAGAAGGATACCTAGGA+AGG | 0.638978 | 8.4:-28266908 | None:intergenic |
| GGTTACAGAGGAGGTTACAG+AGG | 0.639025 | 8.4:+28264395 | MS.gene28507:CDS |
| GATGTGCTCTATACTCAATG+AGG | 0.649586 | 8.4:-28266075 | None:intergenic |
| ATAGAATCAGTTTGAGACGG+AGG | 0.651123 | 8.4:-28264919 | None:intergenic |
| ACTTCCAATCACTGATTACG+AGG | 0.658587 | 8.4:+28265342 | MS.gene28507:CDS |
| GCACTAAATGAAGCCATGGA+GGG | 0.659884 | 8.4:+28266478 | MS.gene28507:CDS |
| TGTCCATCACACGAGCGCGA+TGG | 0.661781 | 8.4:+28266118 | MS.gene28507:CDS |
| AGCACTAAATGAAGCCATGG+AGG | 0.665183 | 8.4:+28266477 | MS.gene28507:CDS |
| TTGTAGCTGTCAAAGAATGG+AGG | 0.683641 | 8.4:+28266153 | MS.gene28507:CDS |
| GTTGTGTCCACTTGATGACG+AGG | 0.696227 | 8.4:+28264744 | MS.gene28507:CDS |
| CACCATTTACCTGAAACCAG+AGG | 0.704277 | 8.4:+28266646 | MS.gene28507:CDS |
| TGATGTTGAACAAAATGAAG+GGG | 0.704807 | 8.4:+28264783 | MS.gene28507:CDS |
| CTTTGACAGCTACAACAACG+AGG | 0.719508 | 8.4:-28266145 | None:intergenic |
| GGATAATCATGATAATACCG+CGG | 0.766773 | 8.4:+28264213 | MS.gene28507:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATATATTATATAAA+GGG | - | chr8.4:28266014-28266033 | None:intergenic | 0.0% |
| !! | AGTATTATTTACAATAATAT+TGG | - | chr8.4:28265488-28265507 | None:intergenic | 10.0% |
| !! | ATATTATTGTAAATAATACT+TGG | + | chr8.4:28265488-28265507 | MS.gene28507:intron | 10.0% |
| !! | CTAATCAAATATTTATAAAA+TGG | - | chr8.4:28264617-28264636 | None:intergenic | 10.0% |
| !! | TATAAATATTTGATTAGAAA+AGG | + | chr8.4:28264620-28264639 | MS.gene28507:intron | 10.0% |
| !! | AAAGTTTAAATAAGTAGATA+TGG | - | chr8.4:28265412-28265431 | None:intergenic | 15.0% |
| !! | AAGTTTAAATAAGTAGATAT+GGG | - | chr8.4:28265411-28265430 | None:intergenic | 15.0% |
| !! | ATTTCATATCAATTAATGAA+AGG | - | chr8.4:28266262-28266281 | None:intergenic | 15.0% |
| !! | TACTTATTTAAACTTTCTTT+AGG | + | chr8.4:28265416-28265435 | MS.gene28507:intron | 15.0% |
| !!! | ATGTTGAAAATTTTATATTC+CGG | + | chr8.4:28267277-28267296 | MS.gene28507:intron | 15.0% |
| !!! | ATTTTTTCAATATTGATTGT+AGG | + | chr8.4:28266615-28266634 | MS.gene28507:intron | 15.0% |
| !!! | TTCAAGGATTTTATATTTAT+AGG | + | chr8.4:28267167-28267186 | MS.gene28507:intron | 15.0% |
| !!! | TTTTCATAATTACTTTTAGA+AGG | + | chr8.4:28265763-28265782 | MS.gene28507:intron | 15.0% |
| !!! | TTTTTTCAATATTGATTGTA+GGG | + | chr8.4:28266616-28266635 | MS.gene28507:intron | 15.0% |
| !! | ATACATTGAAGAGAAATAAA+AGG | - | chr8.4:28266553-28266572 | None:intergenic | 20.0% |
| !! | TAAGACAAGAAAGAAAAAAA+TGG | - | chr8.4:28266934-28266953 | None:intergenic | 20.0% |
| !! | TCAATATTGAAAAAATCCAA+AGG | - | chr8.4:28266611-28266630 | None:intergenic | 20.0% |
| !! | TTACCATAAATTATGCTATA+AGG | + | chr8.4:28265551-28265570 | MS.gene28507:CDS | 20.0% |
| !! | TTATAGCATAATTTATGGTA+AGG | - | chr8.4:28265552-28265571 | None:intergenic | 20.0% |
| !!! | TTGCTTAGAACATATATTTT+AGG | - | chr8.4:28264538-28264557 | None:intergenic | 20.0% |
| !!! | TTTCTACGATTTTACATATT+AGG | - | chr8.4:28265090-28265109 | None:intergenic | 20.0% |
| !!! | TTTTGTAATTCCAGATTTTA+AGG | + | chr8.4:28266784-28266803 | MS.gene28507:intron | 20.0% |
| ! | AACAGGTATTAGTATGTATT+AGG | + | chr8.4:28265871-28265890 | MS.gene28507:intron | 25.0% |
| ! | AACATGATTGCAATAATCAT+TGG | - | chr8.4:28267020-28267039 | None:intergenic | 25.0% |
| ! | AAGAAAAAAATGGTATCAGA+AGG | - | chr8.4:28266924-28266943 | None:intergenic | 25.0% |
| ! | AATATAGAATCAGTTTGAGA+CGG | - | chr8.4:28264925-28264944 | None:intergenic | 25.0% |
| ! | ATCACTGCATATGATAAAAA+GGG | + | chr8.4:28265053-28265072 | MS.gene28507:intron | 25.0% |
| ! | CATAAAGGGAAAAAAGTTAT+CGG | + | chr8.4:28264423-28264442 | MS.gene28507:CDS | 25.0% |
| ! | GAATTTCACTATTTGTTCAA+TGG | - | chr8.4:28264595-28264614 | None:intergenic | 25.0% |
| ! | TATAGAAATAACCAGTTCTT+AGG | + | chr8.4:28265972-28265991 | MS.gene28507:intron | 25.0% |
| ! | TATATTTATAGGTTACTGAC+AGG | + | chr8.4:28267178-28267197 | MS.gene28507:intron | 25.0% |
| ! | TCTTTAGCAAATTCGATATA+TGG | - | chr8.4:28265034-28265053 | None:intergenic | 25.0% |
| ! | TGATAAAAAGGGAAAATGAT+TGG | + | chr8.4:28265064-28265083 | MS.gene28507:intron | 25.0% |
| ! | TTGTTGAGCATAAAAATAGA+TGG | - | chr8.4:28267118-28267137 | None:intergenic | 25.0% |
| ! | TTTATATTCCGGTATTAAGT+TGG | + | chr8.4:28267288-28267307 | MS.gene28507:intron | 25.0% |
| ! | TTTGTGTAACATTGTTTGAA+TGG | + | chr8.4:28264486-28264505 | MS.gene28507:intron | 25.0% |
| !! | AGTTTCTTTTATAGACAAAC+AGG | + | chr8.4:28265854-28265873 | MS.gene28507:intron | 25.0% |
| !! | ATTGCAATTTAGAATTTGGT+CGG | + | chr8.4:28266978-28266997 | MS.gene28507:intron | 25.0% |
| !! | GAAATACAAGAATTTTACGA+AGG | + | chr8.4:28266403-28266422 | MS.gene28507:CDS | 25.0% |
| !! | GATCATTGCAATTTAGAATT+TGG | + | chr8.4:28266974-28266993 | MS.gene28507:intron | 25.0% |
| !! | TCAAACAATTTGTTCTTAAC+TGG | + | chr8.4:28267056-28267075 | MS.gene28507:intron | 25.0% |
| !!! | CTAAAAAGTTTGCTTTTCAT+AGG | + | chr8.4:28265161-28265180 | MS.gene28507:intron | 25.0% |
| !!! | GAACATATATTTTAGGTATC+CGG | - | chr8.4:28264531-28264550 | None:intergenic | 25.0% |
| !!! | TAATGTTTAGTTCTTTTCAC+AGG | + | chr8.4:28265822-28265841 | MS.gene28507:intron | 25.0% |
| !!! | TTCAACATTGTTTTGATCAT+TGG | - | chr8.4:28267265-28267284 | None:intergenic | 25.0% |
| AAGTAAAACATCCTTACAGT+GGG | - | chr8.4:28266700-28266719 | None:intergenic | 30.0% | |
| ATACTTGCATATGAAATCTG+CGG | + | chr8.4:28267137-28267156 | MS.gene28507:intron | 30.0% | |
| CTGATGTTGAACAAAATGAA+GGG | + | chr8.4:28264782-28264801 | MS.gene28507:CDS | 30.0% | |
| GATCACTGCATATGATAAAA+AGG | + | chr8.4:28265052-28265071 | MS.gene28507:intron | 30.0% | |
| GCTCCTTATAGCATAATTTA+TGG | - | chr8.4:28265557-28265576 | None:intergenic | 30.0% | |
| TCTTGTATTTCAAGATAGAG+AGG | - | chr8.4:28266394-28266413 | None:intergenic | 30.0% | |
| TGAAAACAGATCAAAGTCAA+TGG | - | chr8.4:28265749-28265768 | None:intergenic | 30.0% | |
| TGATGTTGAACAAAATGAAG+GGG | + | chr8.4:28264783-28264802 | MS.gene28507:CDS | 30.0% | |
| TTACAGAGGAAGATCATAAA+GGG | + | chr8.4:28264409-28264428 | MS.gene28507:CDS | 30.0% | |
| TTAGATTCAGAGATCTATTC+CGG | + | chr8.4:28267400-28267419 | MS.gene28507:CDS | 30.0% | |
| ! | AATTAGTGTTTTCTGTGTAC+CGG | + | chr8.4:28264509-28264528 | MS.gene28507:intron | 30.0% |
| ! | AGATTTATGCTTTTGCAAGA+CGG | + | chr8.4:28264448-28264467 | MS.gene28507:intron | 30.0% |
| ! | ATATGATAACTGAGCCTTTT+AGG | + | chr8.4:28266841-28266860 | MS.gene28507:CDS | 30.0% |
| ! | CTTTTTAGATGTCTACTATC+TGG | - | chr8.4:28265149-28265168 | None:intergenic | 30.0% |
| ! | TGCACAGTATTGAAAAATCA+CGG | - | chr8.4:28265921-28265940 | None:intergenic | 30.0% |
| !! | ATTTTAAGGAGACCAAGTAT+AGG | + | chr8.4:28266798-28266817 | MS.gene28507:CDS | 30.0% |
| !!! | AGAAAAGGTTACCTCTTTTT+TGG | + | chr8.4:28264635-28264654 | MS.gene28507:intron | 30.0% |
| !!! | CATTGTTTTGATCATTGGAA+TGG | - | chr8.4:28267260-28267279 | None:intergenic | 30.0% |
| !!! | GAAAAGGTTACCTCTTTTTT+GGG | + | chr8.4:28264636-28264655 | MS.gene28507:intron | 30.0% |
| !!! | TTGCAGTAAACGTTTTTAGT+CGG | - | chr8.4:28265210-28265229 | None:intergenic | 30.0% |
| AAGGCCATACAAAACAAGTA+TGG | - | chr8.4:28266892-28266911 | None:intergenic | 35.0% | |
| ACCAAGTTCCTTCTCAAAAT+CGG | - | chr8.4:28267518-28267537 | None:intergenic | 35.0% | |
| AGATGGTAACTCAAGTGATT+TGG | - | chr8.4:28267101-28267120 | None:intergenic | 35.0% | |
| AGATTCTGAATCTGAAGATG+AGG | + | chr8.4:28264720-28264739 | MS.gene28507:CDS | 35.0% | |
| AGCATAAACTGTTATTACCG+CGG | - | chr8.4:28264233-28264252 | None:intergenic | 35.0% | |
| AGTAAAACATCCTTACAGTG+GGG | - | chr8.4:28266699-28266718 | None:intergenic | 35.0% | |
| ATTCAAGAAAGTTTGAGCGT+TGG | + | chr8.4:28264889-28264908 | MS.gene28507:CDS | 35.0% | |
| ATTTCACTACATTATGTGCG+AGG | + | chr8.4:28265719-28265738 | MS.gene28507:intron | 35.0% | |
| CAAGTAAAACATCCTTACAG+TGG | - | chr8.4:28266701-28266720 | None:intergenic | 35.0% | |
| CAGTTATCATATCGATGACA+CGG | - | chr8.4:28266833-28266852 | None:intergenic | 35.0% | |
| CATATTCCTTCTTCAACTTC+AGG | - | chr8.4:28267358-28267377 | None:intergenic | 35.0% | |
| CATCTTCAAAGAAGGGTAAA+CGG | + | chr8.4:28267491-28267510 | MS.gene28507:CDS | 35.0% | |
| CATTACAGTATTCCATGTCT+GGG | + | chr8.4:28265520-28265539 | MS.gene28507:intron | 35.0% | |
| CCATGTTGCTAAAATTCAAC+AGG | + | chr8.4:28264807-28264826 | MS.gene28507:CDS | 35.0% | |
| GAGATTGTCCAACTTAATAC+CGG | - | chr8.4:28267299-28267318 | None:intergenic | 35.0% | |
| GATTCAGAATCTTCTTCTGA+AGG | - | chr8.4:28264712-28264731 | None:intergenic | 35.0% | |
| GCTGATGTTGAACAAAATGA+AGG | + | chr8.4:28264781-28264800 | MS.gene28507:CDS | 35.0% | |
| GGATAATCATGATAATACCG+CGG | + | chr8.4:28264213-28264232 | MS.gene28507:CDS | 35.0% | |
| GTATTTCAAGATAGAGAGGT+TGG | - | chr8.4:28266390-28266409 | None:intergenic | 35.0% | |
| GTTACAGAGGAAGATCATAA+AGG | + | chr8.4:28264408-28264427 | MS.gene28507:CDS | 35.0% | |
| TACTTGGTCTCCTTAAAATC+TGG | - | chr8.4:28266797-28266816 | None:intergenic | 35.0% | |
| TCATTACAGTATTCCATGTC+TGG | + | chr8.4:28265519-28265538 | MS.gene28507:intron | 35.0% | |
| TCCTCTACATCTTCAAAGAA+GGG | + | chr8.4:28267484-28267503 | MS.gene28507:CDS | 35.0% | |
| TGATGTCATAACCTAAGAAC+TGG | - | chr8.4:28265986-28266005 | None:intergenic | 35.0% | |
| TGGCTTACCAAGTTTCTAAA+GGG | + | chr8.4:28264130-28264149 | MS.gene28507:CDS | 35.0% | |
| TTCCTCTACATCTTCAAAGA+AGG | + | chr8.4:28267483-28267502 | MS.gene28507:CDS | 35.0% | |
| TTGTTGTAGCTGTCAAAGAA+TGG | + | chr8.4:28266150-28266169 | MS.gene28507:CDS | 35.0% | |
| TTTGTCAATTCTGTTGTGCT+TGG | + | chr8.4:28265655-28265674 | MS.gene28507:intron | 35.0% | |
| ! | AAGTATCTGTTGCTTGATGA+CGG | + | chr8.4:28266310-28266329 | MS.gene28507:CDS | 35.0% |
| ! | ATCATGTGTTATTGCCAACA+AGG | + | chr8.4:28266202-28266221 | MS.gene28507:intron | 35.0% |
| ! | GACGTTTTTAAACACTTCAC+CGG | - | chr8.4:28264662-28264681 | None:intergenic | 35.0% |
| ! | TATGGAGATGGATTTAGAGA+GGG | + | chr8.4:28267580-28267599 | MS.gene28507:CDS | 35.0% |
| ! | TCTTTCTACTGTCCTGATTT+TGG | + | chr8.4:28266580-28266599 | MS.gene28507:intron | 35.0% |
| ! | TTCTTTGAAGATGTAGAGGA+AGG | - | chr8.4:28267484-28267503 | None:intergenic | 35.0% |
| !! | CAGTATTTTTGTAGCCAGAA+AGG | - | chr8.4:28266100-28266119 | None:intergenic | 35.0% |
| !! | CCTGTTGAATTTTAGCAACA+TGG | - | chr8.4:28264810-28264829 | None:intergenic | 35.0% |
| !! | CTCTTCTGTTTATTTTCGAC+AGG | + | chr8.4:28267316-28267335 | MS.gene28507:intron | 35.0% |
| !! | GTTTATTTTCGACAGGCTAT+GGG | + | chr8.4:28267323-28267342 | MS.gene28507:intron | 35.0% |
| !! | TGTTTATTTTCGACAGGCTA+TGG | + | chr8.4:28267322-28267341 | MS.gene28507:intron | 35.0% |
| !!! | ACAGCCATACTTGTTTTGTA+TGG | + | chr8.4:28266885-28266904 | MS.gene28507:CDS | 35.0% |
| AACCATAAACATTCAGGACG+AGG | + | chr8.4:28264157-28264176 | MS.gene28507:CDS | 40.0% | |
| AACTGAAATAGCCACCTCTA+TGG | + | chr8.4:28265110-28265129 | MS.gene28507:intron | 40.0% | |
| AATCTGCGGTAGATGATTCA+AGG | + | chr8.4:28267151-28267170 | MS.gene28507:intron | 40.0% | |
| AATTGCGATCTCTCTTTCAG+AGG | + | chr8.4:28264374-28264393 | MS.gene28507:CDS | 40.0% | |
| ACAAGCACTAAATGAAGCCA+TGG | + | chr8.4:28266474-28266493 | MS.gene28507:CDS | 40.0% | |
| AGAAGGAATATGCCAAGTCT+TGG | + | chr8.4:28267366-28267385 | MS.gene28507:CDS | 40.0% | |
| AGAGACTGAAGTTGCAATAG+TGG | + | chr8.4:28264294-28264313 | MS.gene28507:intron | 40.0% | |
| AGTATAGAGCACATCCTTTC+TGG | + | chr8.4:28266083-28266102 | MS.gene28507:CDS | 40.0% | |
| ATATGGACACGACAGAGATT+CGG | + | chr8.4:28264192-28264211 | MS.gene28507:CDS | 40.0% | |
| ATCCTCGTCCTGAATGTTTA+TGG | - | chr8.4:28264162-28264181 | None:intergenic | 40.0% | |
| ATCTTGCAAACATCACACCT+TGG | - | chr8.4:28265588-28265607 | None:intergenic | 40.0% | |
| ATGGAAAACTTCCGGTCATT+CGG | - | chr8.4:28267654-28267673 | None:intergenic | 40.0% | |
| ATGGTATCAGAAGGATACCT+AGG | - | chr8.4:28266915-28266934 | None:intergenic | 40.0% | |
| ATTCAGGACGAGGATATACT+GGG | + | chr8.4:28264167-28264186 | MS.gene28507:CDS | 40.0% | |
| CAAACTTTCTTGAATTGCCC+TGG | - | chr8.4:28264884-28264903 | None:intergenic | 40.0% | |
| CATGCATCATTTCATGAGCT+AGG | - | chr8.4:28267210-28267229 | None:intergenic | 40.0% | |
| CATGCTTGGCTTAGACTTAA+AGG | + | chr8.4:28267226-28267245 | MS.gene28507:CDS | 40.0% | |
| CCAAAGGACAATCCAAAATC+AGG | - | chr8.4:28266595-28266614 | None:intergenic | 40.0% | |
| CGAGGATATACTGGGAAATA+TGG | + | chr8.4:28264175-28264194 | MS.gene28507:CDS | 40.0% | |
| CTCATGAAATGATGCATGCT+TGG | + | chr8.4:28267212-28267231 | MS.gene28507:CDS | 40.0% | |
| CTCTCTAAATCCATCTCCAT+AGG | - | chr8.4:28267581-28267600 | None:intergenic | 40.0% | |
| CTGGCTTACCAAGTTTCTAA+AGG | + | chr8.4:28264129-28264148 | MS.gene28507:CDS | 40.0% | |
| GATCTATGTTGTCACCATAG+AGG | - | chr8.4:28265127-28265146 | None:intergenic | 40.0% | |
| GATGTGCTCTATACTCAATG+AGG | - | chr8.4:28266078-28266097 | None:intergenic | 40.0% | |
| GCATGGCAACAAAAACATTC+TGG | - | chr8.4:28265316-28265335 | None:intergenic | 40.0% | |
| GGCGAAAAGAGGTTTGTAAA+AGG | - | chr8.4:28264952-28264971 | None:intergenic | 40.0% | |
| GGTTCGAACCATAAACATTC+AGG | + | chr8.4:28264151-28264170 | MS.gene28507:CDS | 40.0% | |
| TAGTGGCAAATTCTGAGTGT+AGG | + | chr8.4:28264311-28264330 | MS.gene28507:intron | 40.0% | |
| TATCAGAAGGATACCTAGGA+AGG | - | chr8.4:28266911-28266930 | None:intergenic | 40.0% | |
| TCGCATAGTTACCTGTATAC+AGG | - | chr8.4:28264973-28264992 | None:intergenic | 40.0% | |
| TCTTGCAAACATCACACCTT+GGG | - | chr8.4:28265587-28265606 | None:intergenic | 40.0% | |
| TGATTGGAAGTTTGCAAGCA+TGG | - | chr8.4:28265333-28265352 | None:intergenic | 40.0% | |
| TGCAACTCAAAAACCTTCCA+TGG | - | chr8.4:28265276-28265295 | None:intergenic | 40.0% | |
| TGTCTTAACCGTCTGTTTCA+GGG | + | chr8.4:28266947-28266966 | MS.gene28507:intron | 40.0% | |
| TGTTGACGAAGTTCAACTTG+AGG | + | chr8.4:28264843-28264862 | MS.gene28507:CDS | 40.0% | |
| TTCGTTGTTGAACGCTAACA+TGG | + | chr8.4:28265378-28265397 | MS.gene28507:intron | 40.0% | |
| TTGTAGCTGTCAAAGAATGG+AGG | + | chr8.4:28266153-28266172 | MS.gene28507:CDS | 40.0% | |
| TTGTCTTAACCGTCTGTTTC+AGG | + | chr8.4:28266946-28266965 | MS.gene28507:intron | 40.0% | |
| TTTCCAATCAGTGCAGTCAA+CGG | + | chr8.4:28266282-28266301 | MS.gene28507:intron | 40.0% | |
| ! | ACCCTTCTTTGAAGATGTAG+AGG | - | chr8.4:28267488-28267507 | None:intergenic | 40.0% |
| ! | ACTTCCAATCACTGATTACG+AGG | + | chr8.4:28265342-28265361 | MS.gene28507:CDS | 40.0% |
| ! | ATAGAATCAGTTTGAGACGG+AGG | - | chr8.4:28264922-28264941 | None:intergenic | 40.0% |
| ! | CCTGATTTTGGATTGTCCTT+TGG | + | chr8.4:28266592-28266611 | MS.gene28507:intron | 40.0% |
| ! | CTATGGAGATGGATTTAGAG+AGG | + | chr8.4:28267579-28267598 | MS.gene28507:CDS | 40.0% |
| ! | GCAGCAAATTCCTATGCTTT+TGG | + | chr8.4:28266444-28266463 | MS.gene28507:CDS | 40.0% |
| ! | GTTCGAACCCTTTAGAAACT+TGG | - | chr8.4:28264140-28264159 | None:intergenic | 40.0% |
| ! | TGATGATGCTTCTTCACTTC+CGG | - | chr8.4:28267428-28267447 | None:intergenic | 40.0% |
| ! | TGTCTCTCAACCAAAAGCAT+AGG | - | chr8.4:28266457-28266476 | None:intergenic | 40.0% |
| ! | TTTATGCTTTTGCAAGACGG+TGG | + | chr8.4:28264451-28264470 | MS.gene28507:intron | 40.0% |
| !! | TAAACGGTCCGATTTTGAGA+AGG | + | chr8.4:28267507-28267526 | MS.gene28507:CDS | 40.0% |
| !! | TCCGATTTTGAGAAGGAACT+TGG | + | chr8.4:28267514-28267533 | MS.gene28507:CDS | 40.0% |
| !! | TTGTTTTGTATGGCCTTCCT+AGG | + | chr8.4:28266895-28266914 | MS.gene28507:CDS | 40.0% |
| !!! | GGAAGGTTTTTGAGTTGCAT+GGG | + | chr8.4:28265277-28265296 | MS.gene28507:CDS | 40.0% |
| !!! | TGGAAGGTTTTTGAGTTGCA+TGG | + | chr8.4:28265276-28265295 | MS.gene28507:CDS | 40.0% |
| AAACCTTCCATGGCCAATCT+CGG | - | chr8.4:28265266-28265285 | None:intergenic | 45.0% | |
| AACTTCCGGTCATTCGGATA+TGG | - | chr8.4:28267648-28267667 | None:intergenic | 45.0% | |
| ACCACATATGAGCCAAGACT+TGG | - | chr8.4:28267381-28267400 | None:intergenic | 45.0% | |
| ACCTGTATACAGGCGAAAAG+AGG | - | chr8.4:28264963-28264982 | None:intergenic | 45.0% | |
| AGCACTAAATGAAGCCATGG+AGG | + | chr8.4:28266477-28266496 | MS.gene28507:CDS | 45.0% | |
| AGGAAGATGAACAACTTGCC+AGG | + | chr8.4:28264863-28264882 | MS.gene28507:CDS | 45.0% | |
| CACCATTTACCTGAAACCAG+AGG | + | chr8.4:28266646-28266665 | MS.gene28507:CDS | 45.0% | |
| CAGATCCCACAAAATTCAGC+TGG | + | chr8.4:28266052-28266071 | MS.gene28507:intron | 45.0% | |
| CATCGACGTATCAGCCTAAA+AGG | - | chr8.4:28266858-28266877 | None:intergenic | 45.0% | |
| CATTCAGGACGAGGATATAC+TGG | + | chr8.4:28264166-28264185 | MS.gene28507:CDS | 45.0% | |
| CGAACCTCGTAATCAGTGAT+TGG | - | chr8.4:28265349-28265368 | None:intergenic | 45.0% | |
| CTAAATCCATCTCCATAGGC+TGG | - | chr8.4:28267577-28267596 | None:intergenic | 45.0% | |
| CTATGTTGTCACCATAGAGG+TGG | - | chr8.4:28265124-28265143 | None:intergenic | 45.0% | |
| CTCTCTTTCAGAGGTTACAG+AGG | + | chr8.4:28264383-28264402 | MS.gene28507:CDS | 45.0% | |
| CTTGACCATATCCGAATGAC+CGG | + | chr8.4:28267640-28267659 | MS.gene28507:CDS | 45.0% | |
| CTTTGACAGCTACAACAACG+AGG | - | chr8.4:28266148-28266167 | None:intergenic | 45.0% | |
| GATAGTGAGTGTCTCCTTGT+TGG | - | chr8.4:28266219-28266238 | None:intergenic | 45.0% | |
| GATCATTCCCCTGAAACAGA+CGG | - | chr8.4:28266958-28266977 | None:intergenic | 45.0% | |
| GCACTAAATGAAGCCATGGA+GGG | + | chr8.4:28266478-28266497 | MS.gene28507:CDS | 45.0% | |
| GGAAGATGAACAACTTGCCA+GGG | + | chr8.4:28264864-28264883 | MS.gene28507:CDS | 45.0% | |
| GTCTTAACCGTCTGTTTCAG+GGG | + | chr8.4:28266948-28266967 | MS.gene28507:intron | 45.0% | |
| GTGAGCTATCTGTCTCAATC+TGG | - | chr8.4:28267555-28267574 | None:intergenic | 45.0% | |
| GTGTCTTGAGTGTCTCGATT+CGG | + | chr8.4:28266342-28266361 | MS.gene28507:CDS | 45.0% | |
| TCATCTTCCTCGTCATCAAG+TGG | - | chr8.4:28264754-28264773 | None:intergenic | 45.0% | |
| TCTTTCAGAGGTTACAGAGG+AGG | + | chr8.4:28264386-28264405 | MS.gene28507:CDS | 45.0% | |
| TGCTCAAGTATGGGCTTAGA+CGG | + | chr8.4:28267614-28267633 | MS.gene28507:CDS | 45.0% | |
| TGGATTTAGAGAGGGTAACC+AGG | + | chr8.4:28267588-28267607 | MS.gene28507:CDS | 45.0% | |
| TGGTCGGAAAGTAAGTGAAG+TGG | + | chr8.4:28266994-28267013 | MS.gene28507:intron | 45.0% | |
| TTCTGACAAGCAAAGTCCTC+TGG | - | chr8.4:28266665-28266684 | None:intergenic | 45.0% | |
| ! | AAGCAAAGTCCTCTGGTTTC+AGG | - | chr8.4:28266658-28266677 | None:intergenic | 45.0% |
| ! | ACCTCTTTTCGCCTGTATAC+AGG | + | chr8.4:28264959-28264978 | MS.gene28507:CDS | 45.0% |
| ! | ATGAGGCCAGCTGAATTTTG+TGG | - | chr8.4:28266061-28266080 | None:intergenic | 45.0% |
| ! | GTCCTCTGGTTTCAGGTAAA+TGG | - | chr8.4:28266651-28266670 | None:intergenic | 45.0% |
| ! | TACATTCTTTTCGCCCTCCA+TGG | - | chr8.4:28266494-28266513 | None:intergenic | 45.0% |
| ! | TATCCGTTGACTGCACTGAT+TGG | - | chr8.4:28266288-28266307 | None:intergenic | 45.0% |
| ! | TGAGGCCAGCTGAATTTTGT+GGG | - | chr8.4:28266060-28266079 | None:intergenic | 45.0% |
| !! | GTGTCTCGATTCGGCTATTA+TGG | + | chr8.4:28266351-28266370 | MS.gene28507:CDS | 45.0% |
| !!! | AGGTTACCTCTTTTTTGGGC+CGG | + | chr8.4:28264640-28264659 | MS.gene28507:intron | 45.0% |
| !! | GATATTAATATATTATATAA+AGG | - | chr8.4:28266015-28266034 | None:intergenic | 5.0% |
| !! | TATTAATATATTATATAAAG+GGG | - | chr8.4:28266013-28266032 | None:intergenic | 5.0% |
| AACCAGGCAGTGCTCAAGTA+TGG | + | chr8.4:28267604-28267623 | MS.gene28507:CDS | 50.0% | |
| ACAGATAGCTCACCAGCCTA+TGG | + | chr8.4:28267562-28267581 | MS.gene28507:CDS | 50.0% | |
| ACCAGGCAGTGCTCAAGTAT+GGG | + | chr8.4:28267605-28267624 | MS.gene28507:CDS | 50.0% | |
| ACTTCACCGGCCCAAAAAAG+AGG | - | chr8.4:28264649-28264668 | None:intergenic | 50.0% | |
| AGCAAACTGTCCCCACTGTA+AGG | + | chr8.4:28266686-28266705 | MS.gene28507:intron | 50.0% | |
| AGGAGACCAAGTATAGGAGC+AGG | + | chr8.4:28266804-28266823 | MS.gene28507:CDS | 50.0% | |
| ATAAGGAGCTGCATCACCCA+AGG | + | chr8.4:28265568-28265587 | MS.gene28507:CDS | 50.0% | |
| CTGAGGCCTGAAGTTGAAGA+AGG | + | chr8.4:28267349-28267368 | MS.gene28507:CDS | 50.0% | |
| GCCAAGTCTTGGCTCATATG+TGG | + | chr8.4:28267377-28267396 | MS.gene28507:CDS | 50.0% | |
| GGTTACAGAGGAGGTTACAG+AGG | + | chr8.4:28264395-28264414 | MS.gene28507:CDS | 50.0% | |
| GTAAGGACGATTCCCAGACA+TGG | - | chr8.4:28265535-28265554 | None:intergenic | 50.0% | |
| TCAGAGATCTATTCCGGCTC+CGG | + | chr8.4:28267406-28267425 | MS.gene28507:CDS | 50.0% | |
| TGAGTTGCATGGGAGCTGTA+TGG | + | chr8.4:28265287-28265306 | MS.gene28507:CDS | 50.0% | |
| TGTGCTTGCAGAATCTGTGC+TGG | + | chr8.4:28265232-28265251 | MS.gene28507:intron | 50.0% | |
| ! | GAATCAGTTTGAGACGGAGG+AGG | - | chr8.4:28264919-28264938 | None:intergenic | 50.0% |
| !! | GTTGTGTCCACTTGATGACG+AGG | + | chr8.4:28264744-28264763 | MS.gene28507:CDS | 50.0% |
| AGCTCACCAGCCTATGGAGA+TGG | + | chr8.4:28267568-28267587 | MS.gene28507:CDS | 55.0% | |
| CGACAGGCTATGGGAATCTG+AGG | + | chr8.4:28267332-28267351 | MS.gene28507:intron | 55.0% | |
| CGGTAGCCTGCTCCTATACT+TGG | - | chr8.4:28266813-28266832 | None:intergenic | 55.0% | |
| TGCTTCTTCACTTCCGGAGC+CGG | - | chr8.4:28267422-28267441 | None:intergenic | 55.0% | |
| ! | ATGCCGAGATTGGCCATGGA+AGG | + | chr8.4:28265260-28265279 | MS.gene28507:CDS | 55.0% |
| ! | TGCAATGCCGAGATTGGCCA+TGG | + | chr8.4:28265256-28265275 | MS.gene28507:CDS | 55.0% |
| GCTGGCTGCAATGCCGAGAT+TGG | + | chr8.4:28265250-28265269 | MS.gene28507:CDS | 60.0% | |
| TGTCCATCACACGAGCGCGA+TGG | + | chr8.4:28266118-28266137 | MS.gene28507:CDS | 60.0% | |
| ! | GCCCATACTTGAGCACTGCC+TGG | - | chr8.4:28267609-28267628 | None:intergenic | 60.0% |
| GTGCCATCGCGCTCGTGTGA+TGG | - | chr8.4:28266124-28266143 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 28264124 | 28267675 | 28264124 | ID=MS.gene28507 |
| chr8.4 | mRNA | 28264124 | 28267675 | 28264124 | ID=MS.gene28507.t1;Parent=MS.gene28507 |
| chr8.4 | exon | 28264124 | 28264234 | 28264124 | ID=MS.gene28507.t1.exon1;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28264124 | 28264234 | 28264124 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28264333 | 28264444 | 28264333 | ID=MS.gene28507.t1.exon2;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28264333 | 28264444 | 28264333 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28264716 | 28264980 | 28264716 | ID=MS.gene28507.t1.exon3;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28264716 | 28264980 | 28264716 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28265243 | 28265363 | 28265243 | ID=MS.gene28507.t1.exon4;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28265243 | 28265363 | 28265243 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28265528 | 28265611 | 28265528 | ID=MS.gene28507.t1.exon5;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28265528 | 28265611 | 28265528 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28266055 | 28266174 | 28266055 | ID=MS.gene28507.t1.exon6;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28266055 | 28266174 | 28266055 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28266298 | 28266510 | 28266298 | ID=MS.gene28507.t1.exon7;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28266298 | 28266510 | 28266298 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28266637 | 28266702 | 28266637 | ID=MS.gene28507.t1.exon8;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28266637 | 28266702 | 28266637 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28266798 | 28266916 | 28266798 | ID=MS.gene28507.t1.exon9;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28266798 | 28266916 | 28266798 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28267189 | 28267247 | 28267189 | ID=MS.gene28507.t1.exon10;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28267189 | 28267247 | 28267189 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| chr8.4 | exon | 28267338 | 28267675 | 28267338 | ID=MS.gene28507.t1.exon11;Parent=MS.gene28507.t1 |
| chr8.4 | CDS | 28267338 | 28267675 | 28267338 | ID=cds.MS.gene28507.t1;Parent=MS.gene28507.t1 |
| Gene Sequence |
| Protein sequence |
