Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31005.t1 | XP_024635676.1 | 98.3 | 405 | 7 | 0 | 1 | 405 | 1 | 405 | 3.00E-236 | 827.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31005.t1 | Q9LVW7 | 73.6 | 413 | 100 | 2 | 1 | 405 | 3 | 414 | 1.6e-182 | 640.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31005.t1 | A0A396IZL0 | 98.3 | 405 | 7 | 0 | 1 | 405 | 1 | 405 | 2.2e-236 | 827.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049322 | MS.gene31005 | 0.956483 | 2.65E-114 | -1.69E-46 |
| MS.gene050642 | MS.gene31005 | 0.800943 | 1.14E-48 | -1.69E-46 |
| MS.gene050762 | MS.gene31005 | 0.810071 | 1.38E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene31005 | 0.811521 | 6.72E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene31005 | 0.824626 | 7.29E-54 | -1.69E-46 |
| MS.gene052302 | MS.gene31005 | 0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene052376 | MS.gene31005 | 0.801724 | 7.87E-49 | -1.69E-46 |
| MS.gene052856 | MS.gene31005 | 0.833748 | 4.46E-56 | -1.69E-46 |
| MS.gene052858 | MS.gene31005 | 0.810074 | 1.38E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene31005 | 0.805904 | 1.07E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene31005 | 0.822187 | 2.71E-53 | -1.69E-46 |
| MS.gene060084 | MS.gene31005 | 0.807474 | 4.97E-50 | -1.69E-46 |
| MS.gene060297 | MS.gene31005 | 0.800059 | 1.72E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31005.t1 | MTR_4g103830 | 96.552 | 406 | 13 | 1 | 1 | 406 | 1 | 405 | 0.0 | 815 |
| MS.gene31005.t1 | MTR_4g103830 | 93.349 | 421 | 23 | 2 | 1 | 421 | 1 | 416 | 0.0 | 815 |
| MS.gene31005.t1 | MTR_3g095490 | 93.366 | 407 | 12 | 1 | 1 | 407 | 1 | 392 | 0.0 | 783 |
| MS.gene31005.t1 | MTR_3g095490 | 87.961 | 407 | 14 | 2 | 1 | 407 | 1 | 372 | 0.0 | 725 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31005.t1 | AT3G27740 | 73.253 | 415 | 102 | 2 | 1 | 407 | 3 | 416 | 0.0 | 643 |
| MS.gene31005.t1 | AT3G27740 | 78.125 | 224 | 49 | 0 | 184 | 407 | 121 | 344 | 2.99e-135 | 392 |
| MS.gene31005.t1 | AT3G27740 | 59.836 | 122 | 40 | 2 | 1 | 114 | 3 | 123 | 3.19e-36 | 136 |
| MS.gene31005.t1 | AT1G25220 | 30.303 | 165 | 103 | 4 | 244 | 396 | 86 | 250 | 4.15e-12 | 66.6 |
| MS.gene31005.t1 | AT1G25155 | 29.697 | 165 | 104 | 4 | 244 | 396 | 32 | 196 | 9.76e-12 | 64.7 |
| MS.gene31005.t1 | AT1G25083 | 29.697 | 165 | 104 | 4 | 244 | 396 | 32 | 196 | 9.76e-12 | 64.7 |
| MS.gene31005.t1 | AT1G24909 | 29.697 | 165 | 104 | 4 | 244 | 396 | 32 | 196 | 9.76e-12 | 64.7 |
| MS.gene31005.t1 | AT1G25220 | 29.609 | 179 | 112 | 5 | 232 | 396 | 85 | 263 | 1.26e-11 | 65.5 |
| MS.gene31005.t1 | AT1G24807 | 29.050 | 179 | 113 | 5 | 232 | 396 | 31 | 209 | 3.39e-11 | 63.5 |
| MS.gene31005.t1 | AT5G57890 | 28.485 | 165 | 106 | 4 | 244 | 396 | 83 | 247 | 5.82e-11 | 63.2 |
Find 113 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAATACTGGCATCAATTT+TGG | 0.168281 | 3.3:+79179738 | MS.gene31005:CDS |
| CGGGAAGATGGCAGCCTTAT+TGG | 0.173503 | 3.3:+79180219 | MS.gene31005:CDS |
| TCAGCACAGTGCTTCCTTTC+CGG | 0.240008 | 3.3:+79179864 | MS.gene31005:CDS |
| CTTTCTCTCAATGACCTCTT+TGG | 0.245128 | 3.3:+79179207 | MS.gene31005:CDS |
| CAATTGCTTGGCCAGGCTTT+AGG | 0.266746 | 3.3:+79181003 | MS.gene31005:CDS |
| GCTAAATCATTTGGTGCTTC+AGG | 0.275622 | 3.3:+79179500 | MS.gene31005:CDS |
| TTCTCTGTCAGATGTTCTTC+TGG | 0.292462 | 3.3:+79179270 | MS.gene31005:CDS |
| ACAACCTACAAGATGAAATT+TGG | 0.299468 | 3.3:+79181030 | MS.gene31005:CDS |
| AAGTAATTCCTCGTCTGTTT+TGG | 0.306778 | 3.3:-79180262 | None:intergenic |
| TGTTAGAAGATGGTTCAATT+TGG | 0.310513 | 3.3:+79179474 | MS.gene31005:CDS |
| TGGATTTAACTTCAAAGTTT+CGG | 0.329533 | 3.3:-79180866 | None:intergenic |
| CTGGAGATGTGTGAAGGATT+TGG | 0.330063 | 3.3:+79180032 | MS.gene31005:CDS |
| TAGGTAGTTGCATACGATTT+TGG | 0.336986 | 3.3:+79180766 | MS.gene31005:intron |
| ATTTGGAAAGCTAAATCATT+TGG | 0.341512 | 3.3:+79179491 | MS.gene31005:CDS |
| TGAGGTCCAGGAGATGCTTC+AGG | 0.357210 | 3.3:-79181753 | None:intergenic |
| AACTTCAAAGTTTCGGATGC+TGG | 0.363527 | 3.3:-79180859 | None:intergenic |
| GTGACCAAATTTCATCTTGT+AGG | 0.368330 | 3.3:-79181034 | None:intergenic |
| AATCCACATATTGGGAATAC+TGG | 0.375932 | 3.3:+79179726 | MS.gene31005:CDS |
| GTTCTATCAATCCATTCATA+TGG | 0.384320 | 3.3:-79180602 | None:intergenic |
| ACTCCTTCAGGCAGTGTGGC+AGG | 0.385852 | 3.3:-79181645 | None:intergenic |
| GGGCAATCACACGTAGATTA+CGG | 0.396622 | 3.3:+79180199 | MS.gene31005:CDS |
| CTGATGACAAATCCACATAT+TGG | 0.396769 | 3.3:+79179717 | MS.gene31005:CDS |
| TGAAAACAACTTCACCAACT+TGG | 0.401704 | 3.3:-79179526 | None:intergenic |
| TCGGATGCTGGCCATGTAGA+TGG | 0.404003 | 3.3:-79180847 | None:intergenic |
| TGAGTAACTTCTACTCCTTC+AGG | 0.404731 | 3.3:-79181657 | None:intergenic |
| TTTACTGTTTCAACGGCATA+AGG | 0.405190 | 3.3:-79180934 | None:intergenic |
| ATTAATGGCAACAAAAGCTT+TGG | 0.405497 | 3.3:+79179176 | None:intergenic |
| TGCATGAATGTATAGGTAAT+GGG | 0.406728 | 3.3:+79179417 | MS.gene31005:intron |
| TACTTCAGATGTCTAAATCA+TGG | 0.414242 | 3.3:+79180280 | MS.gene31005:CDS |
| CAAACTTCTAATTACTAAAC+CGG | 0.415332 | 3.3:-79179883 | None:intergenic |
| GGCAATCACACGTAGATTAC+GGG | 0.418709 | 3.3:+79180200 | MS.gene31005:CDS |
| TGGAGATGTGTGAAGGATTT+GGG | 0.420135 | 3.3:+79180033 | MS.gene31005:CDS |
| TTGATAGAACAAAGGAAGAA+TGG | 0.426377 | 3.3:+79180615 | MS.gene31005:CDS |
| TGATGACAAATCCACATATT+GGG | 0.432957 | 3.3:+79179718 | MS.gene31005:CDS |
| ATTTATTCAGTACCTCAAAC+TGG | 0.433137 | 3.3:+79180013 | MS.gene31005:intron |
| CAGTGCTCAAAACACCAATA+AGG | 0.434979 | 3.3:-79180233 | None:intergenic |
| TTAACTGATCCTAGTTATGC+TGG | 0.440990 | 3.3:+79179684 | MS.gene31005:CDS |
| CTTCACACATCTCCAGTTTG+AGG | 0.444880 | 3.3:-79180025 | None:intergenic |
| CCGTGTTGAAATTAGTTCTC+AGG | 0.452192 | 3.3:+79181095 | MS.gene31005:CDS |
| GGGACATCAATTGCTTGGCC+AGG | 0.456415 | 3.3:+79180996 | MS.gene31005:CDS |
| TGCATGGGACATCAATTGCT+TGG | 0.457302 | 3.3:+79180991 | MS.gene31005:CDS |
| CTTAGGCGTCTAGCATCATA+TGG | 0.460279 | 3.3:+79180805 | MS.gene31005:CDS |
| CAAAGAGGTCATTGAGAGAA+AGG | 0.466089 | 3.3:-79179206 | None:intergenic |
| GAAACAGTAAAGAATATCAT+TGG | 0.466180 | 3.3:+79180946 | MS.gene31005:CDS |
| GATTTGTCATCAGCACAAAC+TGG | 0.471155 | 3.3:-79179707 | None:intergenic |
| ACATTATCCTTCTTCAATGA+AGG | 0.472185 | 3.3:-79182282 | None:intergenic |
| GCTAGACTTGTGTTAGAAGA+TGG | 0.472551 | 3.3:+79179464 | MS.gene31005:CDS |
| TACCACCCTGAAGCATCTCC+TGG | 0.473772 | 3.3:+79181747 | MS.gene31005:CDS |
| TGATAGAACAAAGGAAGAAT+GGG | 0.475190 | 3.3:+79180616 | MS.gene31005:CDS |
| TTGCTGAAAAGTACACCATC+TGG | 0.479305 | 3.3:-79180886 | None:intergenic |
| GAAAACAACTTCACCAACTT+GGG | 0.481798 | 3.3:-79179525 | None:intergenic |
| TAATTAGAAGTTTGAGTACC+AGG | 0.483273 | 3.3:+79179892 | MS.gene31005:CDS |
| CGTGCAAGTCACCATATGAA+TGG | 0.483758 | 3.3:+79180591 | MS.gene31005:CDS |
| GGAACAGCAGAAGGATCTCC+AGG | 0.484183 | 3.3:-79180913 | None:intergenic |
| CAATGACCTCTTTGGTTCCA+AGG | 0.486297 | 3.3:+79179215 | MS.gene31005:CDS |
| ATGCCAGTATTCCCAATATG+TGG | 0.486638 | 3.3:-79179729 | None:intergenic |
| GCAGGTATTGATCTAATAAG+TGG | 0.487567 | 3.3:+79180563 | MS.gene31005:intron |
| GATATTCTTTACTGTTTCAA+CGG | 0.495805 | 3.3:-79180941 | None:intergenic |
| TTGAGCAGGGAAAGCAAGAC+CGG | 0.499137 | 3.3:-79181706 | None:intergenic |
| TCTAAATCATGGGATATTGT+TGG | 0.502781 | 3.3:+79180291 | MS.gene31005:CDS |
| CTCCTTCAGGCAGTGTGGCA+GGG | 0.505914 | 3.3:-79181644 | None:intergenic |
| GAATCAAGCATAATATACTT+AGG | 0.506239 | 3.3:+79180788 | MS.gene31005:CDS |
| AGAGGTGTGTGGCGGCGCCT+TGG | 0.508323 | 3.3:-79179232 | None:intergenic |
| CTCGTAGCCTTCATTGAAGA+AGG | 0.515567 | 3.3:+79182275 | MS.gene31005:CDS |
| CCAGTTCGAAGGTTACGAAC+AGG | 0.516140 | 3.3:-79181072 | None:intergenic |
| CTCAATGACAGTAGTTGTGC+CGG | 0.517106 | 3.3:+79181687 | MS.gene31005:CDS |
| ACAAACTGGCCAGCATAACT+AGG | 0.518582 | 3.3:-79179693 | None:intergenic |
| CTTAACTGAAAGGAATGTCA+TGG | 0.522571 | 3.3:+79180062 | MS.gene31005:CDS |
| TTGTCAGAATCATGAGGTCC+AGG | 0.525671 | 3.3:-79181765 | None:intergenic |
| GAGGTCCAGGAGATGCTTCA+GGG | 0.527220 | 3.3:-79181752 | None:intergenic |
| AGTATCTCTAGGCCCTTCAC+TGG | 0.527684 | 3.3:-79180648 | None:intergenic |
| CCTGTTCGTAACCTTCGAAC+TGG | 0.534549 | 3.3:+79181072 | MS.gene31005:CDS |
| TGGGCGATTACTTAACTGAA+AGG | 0.537172 | 3.3:+79180052 | MS.gene31005:CDS |
| CTTACATGGAAAGTATCTCT+AGG | 0.537477 | 3.3:-79180659 | None:intergenic |
| TAGGTAATGGGGAAAGGCCA+TGG | 0.546071 | 3.3:+79179429 | MS.gene31005:intron |
| GGTGCTTCAGGAACCCAAGT+TGG | 0.546817 | 3.3:+79179512 | MS.gene31005:CDS |
| ACACGTAGATTACGGGAAGA+TGG | 0.551699 | 3.3:+79180207 | MS.gene31005:CDS |
| AAAGAGGTCATTGAGAGAAA+GGG | 0.551745 | 3.3:-79179205 | None:intergenic |
| ACTTCAGATGTCTAAATCAT+GGG | 0.552487 | 3.3:+79180281 | MS.gene31005:CDS |
| CAACAGATGATGTTGATACA+AGG | 0.554004 | 3.3:+79180178 | MS.gene31005:intron |
| GGCTAGCAGCCGATTGGCAT+AGG | 0.554150 | 3.3:+79182252 | MS.gene31005:CDS |
| TACAAGGGCTAGCAGCCGAT+TGG | 0.556106 | 3.3:+79182246 | MS.gene31005:intron |
| TTGCTTGGCCAGGCTTTAGG+AGG | 0.558881 | 3.3:+79181006 | MS.gene31005:CDS |
| AATGTATAGGTAATGGGGAA+AGG | 0.560392 | 3.3:+79179423 | MS.gene31005:intron |
| TCACTGTTGTGCCATCTACA+TGG | 0.561762 | 3.3:+79180836 | MS.gene31005:CDS |
| GAACAGGATGATTTCCTCCA+TGG | 0.563497 | 3.3:-79181056 | None:intergenic |
| TTTCAACACGGCCAGTTCGA+AGG | 0.571733 | 3.3:-79181083 | None:intergenic |
| GCATGAATGTATAGGTAATG+GGG | 0.572178 | 3.3:+79179418 | MS.gene31005:intron |
| CAGGGTCAACTGCATAGTTG+TGG | 0.573224 | 3.3:-79181626 | None:intergenic |
| AGGTTGTACCTCCTAAAGCC+TGG | 0.573954 | 3.3:-79181014 | None:intergenic |
| AGTAAAGAATATCATTGGAA+AGG | 0.576011 | 3.3:+79180951 | MS.gene31005:CDS |
| GGCTACGAGCCTATGCCAAT+CGG | 0.576216 | 3.3:-79182261 | None:intergenic |
| GACCCTGCCACACTGCCTGA+AGG | 0.593729 | 3.3:+79181642 | MS.gene31005:CDS |
| TTAACTGAAAGGAATGTCAT+GGG | 0.597258 | 3.3:+79180063 | MS.gene31005:CDS |
| GTCATTGAGAGAAAGGGTGA+AGG | 0.598395 | 3.3:-79179199 | None:intergenic |
| TGGGAGTTTAGCTCCAGTGA+AGG | 0.599112 | 3.3:+79180635 | MS.gene31005:CDS |
| ACGGCATAAGGAACAGCAGA+AGG | 0.606024 | 3.3:-79180922 | None:intergenic |
| CTCAAACTGGAGATGTGTGA+AGG | 0.613677 | 3.3:+79180026 | MS.gene31005:CDS |
| AAGATGAAATTTGGTCACCA+TGG | 0.620210 | 3.3:+79181039 | MS.gene31005:CDS |
| ACTTTGAAGTTAAATCCAGA+TGG | 0.620988 | 3.3:+79180871 | MS.gene31005:CDS |
| ATGAAATTTGGTCACCATGG+AGG | 0.624582 | 3.3:+79181042 | MS.gene31005:CDS |
| TTCTAATTACTAAACCGGAA+AGG | 0.626092 | 3.3:-79179878 | None:intergenic |
| AACAGATGATGTTGATACAA+GGG | 0.626187 | 3.3:+79180179 | MS.gene31005:intron |
| TGAATGGATTGATAGAACAA+AGG | 0.627214 | 3.3:+79180607 | MS.gene31005:CDS |
| GGGAGTTTAGCTCCAGTGAA+GGG | 0.629622 | 3.3:+79180636 | MS.gene31005:CDS |
| GGACCTCATGATTCTGACAA+CGG | 0.640994 | 3.3:+79181768 | MS.gene31005:CDS |
| GCGGCGCCTTGGAACCAAAG+AGG | 0.643056 | 3.3:-79179221 | None:intergenic |
| TTCTACTCCTTCAGGCAGTG+TGG | 0.658466 | 3.3:-79181649 | None:intergenic |
| TCATTGTCTGACAGATGACG+AGG | 0.685177 | 3.3:+79179839 | MS.gene31005:intron |
| TCACCGTTGTCAGAATCATG+AGG | 0.688390 | 3.3:-79181771 | None:intergenic |
| CCTGAGAACTAATTTCAACA+CGG | 0.701914 | 3.3:-79181095 | None:intergenic |
| TGACAATTCCAAAACAGACG+AGG | 0.706266 | 3.3:+79180254 | MS.gene31005:CDS |
| GTCCAGGAGATGCTTCAGGG+TGG | 0.722700 | 3.3:-79181749 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTGATACATATAAAT+TGG | + | chr3.3:79181598-79181617 | MS.gene31005:intron | 10.0% |
| !!! | TTTTTTTCATAATTATTTGT+TGG | + | chr3.3:79179311-79179330 | MS.gene31005:intron | 10.0% |
| !! | AATAAATAAAAAATTGCAAC+TGG | + | chr3.3:79181346-79181365 | MS.gene31005:intron | 15.0% |
| !! | ATATCACAAGATTTATAATT+TGG | - | chr3.3:79179573-79179592 | None:intergenic | 15.0% |
| !! | TGATAATAAATATAACTGTT+TGG | + | chr3.3:79181830-79181849 | MS.gene31005:intron | 15.0% |
| !! | TTTAAACAAACCATAAATAT+AGG | - | chr3.3:79181498-79181517 | None:intergenic | 15.0% |
| !!! | AAATTTTTTAAAGATTGTGA+AGG | - | chr3.3:79181856-79181875 | None:intergenic | 15.0% |
| !!! | ATAGCATAAAATTTTGAATA+TGG | + | chr3.3:79181436-79181455 | MS.gene31005:intron | 15.0% |
| !! | AAAAATTTATATTCAAGAGC+AGG | + | chr3.3:79181868-79181887 | MS.gene31005:intron | 20.0% |
| !! | TAAATCCATTTGAATTCATT+TGG | + | chr3.3:79181181-79181200 | MS.gene31005:intron | 20.0% |
| !! | TTAAGTAATTACCATGATTA+CGG | - | chr3.3:79181164-79181183 | None:intergenic | 20.0% |
| !!! | AAAAAAGACAACATTTTTCA+TGG | - | chr3.3:79179345-79179364 | None:intergenic | 20.0% |
| !!! | AAAAAGACAACATTTTTCAT+GGG | - | chr3.3:79179344-79179363 | None:intergenic | 20.0% |
| !!! | AAATGTTGTCTTTTTTGATT+TGG | + | chr3.3:79179349-79179368 | MS.gene31005:intron | 20.0% |
| !!! | ATATTTTTTGCTTCATAGAA+GGG | + | chr3.3:79181248-79181267 | MS.gene31005:intron | 20.0% |
| !!! | GATATTCTTTTGTTGTTTTA+TGG | + | chr3.3:79179588-79179607 | MS.gene31005:intron | 20.0% |
| !!! | GTATTTTATTCTTTTTGTCA+TGG | + | chr3.3:79181564-79181583 | MS.gene31005:intron | 20.0% |
| !!! | TATATTTTTTGCTTCATAGA+AGG | + | chr3.3:79181247-79181266 | MS.gene31005:intron | 20.0% |
| ! | AAATGAATGCATGAATGTAT+AGG | + | chr3.3:79179410-79179429 | MS.gene31005:intron | 25.0% |
| ! | AATGAAACAGAAACTCAATT+AGG | - | chr3.3:79179625-79179644 | None:intergenic | 25.0% |
| ! | ACGAAATTGTAAAAGCAAAT+TGG | - | chr3.3:79181926-79181945 | None:intergenic | 25.0% |
| ! | AGTAAAGAATATCATTGGAA+AGG | + | chr3.3:79180951-79180970 | MS.gene31005:CDS | 25.0% |
| ! | ATTTGGAAAGCTAAATCATT+TGG | + | chr3.3:79179491-79179510 | MS.gene31005:CDS | 25.0% |
| ! | CAAACTTCTAATTACTAAAC+CGG | - | chr3.3:79179886-79179905 | None:intergenic | 25.0% |
| ! | GAAACAGTAAAGAATATCAT+TGG | + | chr3.3:79180946-79180965 | MS.gene31005:CDS | 25.0% |
| ! | GAATCAAGCATAATATACTT+AGG | + | chr3.3:79180788-79180807 | MS.gene31005:CDS | 25.0% |
| ! | GATATTCTTTACTGTTTCAA+CGG | - | chr3.3:79180944-79180963 | None:intergenic | 25.0% |
| ! | TATGTGTAGTCCTATATTTA+TGG | + | chr3.3:79181485-79181504 | MS.gene31005:intron | 25.0% |
| ! | TTAAAATTTCTTGATACCTG+AGG | - | chr3.3:79179668-79179687 | None:intergenic | 25.0% |
| ! | TTACCCAAAATTCAACAAAA+GGG | - | chr3.3:79180713-79180732 | None:intergenic | 25.0% |
| ! | TTCTTAGTAGTTTCTATCTA+TGG | + | chr3.3:79182163-79182182 | MS.gene31005:intron | 25.0% |
| !! | CTTGATAACATGTAATGATA+TGG | - | chr3.3:79181525-79181544 | None:intergenic | 25.0% |
| !! | TGGATTTAACTTCAAAGTTT+CGG | - | chr3.3:79180869-79180888 | None:intergenic | 25.0% |
| !!! | AAATTTTATGCTATTTCCAC+AGG | - | chr3.3:79181430-79181449 | None:intergenic | 25.0% |
| !!! | TTTTATTTATTTTTGCCACG+AGG | - | chr3.3:79181337-79181356 | None:intergenic | 25.0% |
| !!! | TTTTCAATACATCATTGACT+GGG | + | chr3.3:79179543-79179562 | MS.gene31005:CDS | 25.0% |
| !!! | TTTTTTGATTTGGTGTTGTT+GGG | + | chr3.3:79179359-79179378 | MS.gene31005:intron | 25.0% |
| AAAGTATGTGATAAAAGCTC+AGG | + | chr3.3:79182140-79182159 | MS.gene31005:intron | 30.0% | |
| AACAGATGATGTTGATACAA+GGG | + | chr3.3:79180179-79180198 | MS.gene31005:intron | 30.0% | |
| AATACTTTATCCTTCTAGCA+TGG | - | chr3.3:79182120-79182139 | None:intergenic | 30.0% | |
| ACAACCTACAAGATGAAATT+TGG | + | chr3.3:79181030-79181049 | MS.gene31005:CDS | 30.0% | |
| ACTTCAGATGTCTAAATCAT+GGG | + | chr3.3:79180281-79180300 | MS.gene31005:CDS | 30.0% | |
| AGAAAGTAAAGCTCAATCAA+CGG | - | chr3.3:79179946-79179965 | None:intergenic | 30.0% | |
| ATCACAACAGTGGTTATTAT+TGG | - | chr3.3:79181973-79181992 | None:intergenic | 30.0% | |
| ATGCATGAATGTATAGGTAA+TGG | + | chr3.3:79179416-79179435 | MS.gene31005:intron | 30.0% | |
| ATTATCAACAATCACAACAG+TGG | - | chr3.3:79181983-79182002 | None:intergenic | 30.0% | |
| ATTTATTCAGTACCTCAAAC+TGG | + | chr3.3:79180013-79180032 | MS.gene31005:intron | 30.0% | |
| CTTACCCAAAATTCAACAAA+AGG | - | chr3.3:79180714-79180733 | None:intergenic | 30.0% | |
| GCTCTTTATCAAAAGAAGTT+TGG | + | chr3.3:79181805-79181824 | MS.gene31005:intron | 30.0% | |
| GTCTTGTAGGATATAATCAT+TGG | + | chr3.3:79181898-79181917 | MS.gene31005:intron | 30.0% | |
| GTTCTATCAATCCATTCATA+TGG | - | chr3.3:79180605-79180624 | None:intergenic | 30.0% | |
| TAATTAGAAGTTTGAGTACC+AGG | + | chr3.3:79179892-79179911 | MS.gene31005:CDS | 30.0% | |
| TACTTCAGATGTCTAAATCA+TGG | + | chr3.3:79180280-79180299 | MS.gene31005:CDS | 30.0% | |
| TCAGACCAAATGAATTCAAA+TGG | - | chr3.3:79181189-79181208 | None:intergenic | 30.0% | |
| TCCATGTAAGTTTATACAGT+AGG | + | chr3.3:79180672-79180691 | MS.gene31005:intron | 30.0% | |
| TCTAAATCATGGGATATTGT+TGG | + | chr3.3:79180291-79180310 | MS.gene31005:CDS | 30.0% | |
| TGATAGAACAAAGGAAGAAT+GGG | + | chr3.3:79180616-79180635 | MS.gene31005:CDS | 30.0% | |
| TGATGACAAATCCACATATT+GGG | + | chr3.3:79179718-79179737 | MS.gene31005:CDS | 30.0% | |
| TGCATGAATGTATAGGTAAT+GGG | + | chr3.3:79179417-79179436 | MS.gene31005:intron | 30.0% | |
| TGTTAGAAGATGGTTCAATT+TGG | + | chr3.3:79179474-79179493 | MS.gene31005:CDS | 30.0% | |
| TTAACTGAAAGGAATGTCAT+GGG | + | chr3.3:79180063-79180082 | MS.gene31005:CDS | 30.0% | |
| TTCTAATTACTAAACCGGAA+AGG | - | chr3.3:79179881-79179900 | None:intergenic | 30.0% | |
| TTGATAGAACAAAGGAAGAA+TGG | + | chr3.3:79180615-79180634 | MS.gene31005:CDS | 30.0% | |
| ! | ACTCCCTTTTGTTGAATTTT+GGG | + | chr3.3:79180707-79180726 | MS.gene31005:intron | 30.0% |
| ! | ATTATTACACTGATTGCAGT+TGG | - | chr3.3:79182074-79182093 | None:intergenic | 30.0% |
| ! | ATTCTTTTCTTCTCAAGACA+AGG | - | chr3.3:79181287-79181306 | None:intergenic | 30.0% |
| ! | ATTCTTTTTGTCATGGTCTT+TGG | + | chr3.3:79181571-79181590 | MS.gene31005:intron | 30.0% |
| ! | CTATGGTTTGTAGATGAATA+AGG | + | chr3.3:79182180-79182199 | MS.gene31005:intron | 30.0% |
| ! | GTTTTCAATACATCATTGAC+TGG | + | chr3.3:79179542-79179561 | MS.gene31005:CDS | 30.0% |
| ! | TTCTTTTCTTCTCAAGACAA+GGG | - | chr3.3:79181286-79181305 | None:intergenic | 30.0% |
| ! | TTGAAATTAGTTCTCAGGTA+TGG | + | chr3.3:79181100-79181119 | MS.gene31005:intron | 30.0% |
| ! | TTGTTGGTAAGAATGACTAT+TGG | + | chr3.3:79180307-79180326 | MS.gene31005:intron | 30.0% |
| !! | ACTTTGAAGTTAAATCCAGA+TGG | + | chr3.3:79180871-79180890 | MS.gene31005:CDS | 30.0% |
| !! | GTACTGATGAATGATCTTTT+AGG | + | chr3.3:79180747-79180766 | MS.gene31005:intron | 30.0% |
| !! | TCAAGAGATGGTTTTTAAAG+TGG | - | chr3.3:79179818-79179837 | None:intergenic | 30.0% |
| !! | TGAATGGATTGATAGAACAA+AGG | + | chr3.3:79180607-79180626 | MS.gene31005:CDS | 30.0% |
| !!! | CTTTTTTGATTTGGTGTTGT+TGG | + | chr3.3:79179358-79179377 | MS.gene31005:intron | 30.0% |
| !!! | TTGTTGATAATGCAGCTTTT+CGG | + | chr3.3:79181992-79182011 | MS.gene31005:intron | 30.0% |
| AAAGAGGTCATTGAGAGAAA+GGG | - | chr3.3:79179208-79179227 | None:intergenic | 35.0% | |
| AAATTCAACAAAAGGGAGTC+AGG | - | chr3.3:79180706-79180725 | None:intergenic | 35.0% | |
| AAGATGAAATTTGGTCACCA+TGG | + | chr3.3:79181039-79181058 | MS.gene31005:CDS | 35.0% | |
| AAGTTTATACAGTAGGCTGT+TGG | + | chr3.3:79180679-79180698 | MS.gene31005:intron | 35.0% | |
| AATCCACATATTGGGAATAC+TGG | + | chr3.3:79179726-79179745 | MS.gene31005:CDS | 35.0% | |
| AATTCAACAAAAGGGAGTCA+GGG | - | chr3.3:79180705-79180724 | None:intergenic | 35.0% | |
| AATTCAGTGTTGTCAAACTG+CGG | + | chr3.3:79180361-79180380 | MS.gene31005:intron | 35.0% | |
| AGAACGTTACATGTAAACTC+TGG | + | chr3.3:79180121-79180140 | MS.gene31005:intron | 35.0% | |
| ATTTCTTGATACCTGAGGAA+TGG | - | chr3.3:79179663-79179682 | None:intergenic | 35.0% | |
| CAACAGATGATGTTGATACA+AGG | + | chr3.3:79180178-79180197 | MS.gene31005:intron | 35.0% | |
| CCTGAGAACTAATTTCAACA+CGG | - | chr3.3:79181098-79181117 | None:intergenic | 35.0% | |
| CTGATGACAAATCCACATAT+TGG | + | chr3.3:79179717-79179736 | MS.gene31005:CDS | 35.0% | |
| CTTAACTGAAAGGAATGTCA+TGG | + | chr3.3:79180062-79180081 | MS.gene31005:CDS | 35.0% | |
| GAAAACAACTTCACCAACTT+GGG | - | chr3.3:79179528-79179547 | None:intergenic | 35.0% | |
| GAAAATCTTGATCAACTCCA+AGG | - | chr3.3:79182210-79182229 | None:intergenic | 35.0% | |
| GAAGAGACAAAGAGTAAGTA+TGG | - | chr3.3:79179974-79179993 | None:intergenic | 35.0% | |
| GAATTCATTTGGTCTGATGA+GGG | + | chr3.3:79181192-79181211 | MS.gene31005:intron | 35.0% | |
| GCATGAATGTATAGGTAATG+GGG | + | chr3.3:79179418-79179437 | MS.gene31005:intron | 35.0% | |
| GCCTACTGTATAAACTTACA+TGG | - | chr3.3:79180676-79180695 | None:intergenic | 35.0% | |
| GCTCAATCAACGGAAAATAT+TGG | - | chr3.3:79179936-79179955 | None:intergenic | 35.0% | |
| GTGACCAAATTTCATCTTGT+AGG | - | chr3.3:79181037-79181056 | None:intergenic | 35.0% | |
| TAGATGAATAAGGACTTCCT+TGG | + | chr3.3:79182190-79182209 | MS.gene31005:intron | 35.0% | |
| TCAGACAATGAATCAAGAGA+TGG | - | chr3.3:79179830-79179849 | None:intergenic | 35.0% | |
| TCATCATTTCACCGTAATCA+TGG | + | chr3.3:79181150-79181169 | MS.gene31005:intron | 35.0% | |
| TGAAAACAACTTCACCAACT+TGG | - | chr3.3:79179529-79179548 | None:intergenic | 35.0% | |
| TGAATTCATTTGGTCTGATG+AGG | + | chr3.3:79181191-79181210 | MS.gene31005:intron | 35.0% | |
| TTAACTGATCCTAGTTATGC+TGG | + | chr3.3:79179684-79179703 | MS.gene31005:CDS | 35.0% | |
| TTGGTAAGAATGACTATTGG+AGG | + | chr3.3:79180310-79180329 | MS.gene31005:intron | 35.0% | |
| TTTACTGTTTCAACGGCATA+AGG | - | chr3.3:79180937-79180956 | None:intergenic | 35.0% | |
| ! | AAGTAATTCCTCGTCTGTTT+TGG | - | chr3.3:79180265-79180284 | None:intergenic | 35.0% |
| ! | CTAGCATCTGAATTTTTCCA+TGG | - | chr3.3:79179449-79179468 | None:intergenic | 35.0% |
| ! | GACTCCCTTTTGTTGAATTT+TGG | + | chr3.3:79180706-79180725 | MS.gene31005:intron | 35.0% |
| ! | GGCTTATGTTTCTTATTTGC+AGG | + | chr3.3:79180545-79180564 | MS.gene31005:intron | 35.0% |
| ! | TAGGTAGTTGCATACGATTT+TGG | + | chr3.3:79180766-79180785 | MS.gene31005:intron | 35.0% |
| ! | TGTGTCCATTTTCTGTACAA+GGG | + | chr3.3:79182231-79182250 | MS.gene31005:intron | 35.0% |
| ! | TTGTGTCCATTTTCTGTACA+AGG | + | chr3.3:79182230-79182249 | MS.gene31005:intron | 35.0% |
| !! | AATGTATAGGTAATGGGGAA+AGG | + | chr3.3:79179423-79179442 | MS.gene31005:intron | 35.0% |
| !! | AGTTGGTGTAGGTTTTCATT+CGG | - | chr3.3:79182057-79182076 | None:intergenic | 35.0% |
| !! | CTTACATGGAAAGTATCTCT+AGG | - | chr3.3:79180662-79180681 | None:intergenic | 35.0% |
| !! | GCAGGTATTGATCTAATAAG+TGG | + | chr3.3:79180563-79180582 | MS.gene31005:intron | 35.0% |
| !!! | CCTGTTTTTGGAATTTGCAT+GGG | + | chr3.3:79180976-79180995 | MS.gene31005:CDS | 35.0% |
| !!! | TGTTGATAATGCAGCTTTTC+GGG | + | chr3.3:79181993-79182012 | MS.gene31005:intron | 35.0% |
| !!! | TTTTAAAGTGGACTAGCACA+AGG | - | chr3.3:79179806-79179825 | None:intergenic | 35.0% |
| AACTTCAAAGTTTCGGATGC+TGG | - | chr3.3:79180862-79180881 | None:intergenic | 40.0% | |
| AATATCCATCGCAAAGAGAC+AGG | - | chr3.3:79179996-79180015 | None:intergenic | 40.0% | |
| ACAACTCTGCTGGAATTACA+TGG | + | chr3.3:79180524-79180543 | MS.gene31005:intron | 40.0% | |
| ACTTTATCCTTCTAGCATGG+TGG | - | chr3.3:79182117-79182136 | None:intergenic | 40.0% | |
| AGCAGGATTATGTGTCTTGT+AGG | + | chr3.3:79181885-79181904 | MS.gene31005:intron | 40.0% | |
| ATGAAATTTGGTCACCATGG+AGG | + | chr3.3:79181042-79181061 | MS.gene31005:CDS | 40.0% | |
| ATGCCAGTATTCCCAATATG+TGG | - | chr3.3:79179732-79179751 | None:intergenic | 40.0% | |
| CAAAGAGGTCATTGAGAGAA+AGG | - | chr3.3:79179209-79179228 | None:intergenic | 40.0% | |
| CAGTGCTCAAAACACCAATA+AGG | - | chr3.3:79180236-79180255 | None:intergenic | 40.0% | |
| CATGGACATTATTAGACCTG+TGG | + | chr3.3:79181411-79181430 | MS.gene31005:intron | 40.0% | |
| CCCATGCAAATTCCAAAAAC+AGG | - | chr3.3:79180979-79180998 | None:intergenic | 40.0% | |
| CTTTATCCTTCTAGCATGGT+GGG | - | chr3.3:79182116-79182135 | None:intergenic | 40.0% | |
| CTTTCTCTCAATGACCTCTT+TGG | + | chr3.3:79179207-79179226 | MS.gene31005:CDS | 40.0% | |
| GATTTGTCATCAGCACAAAC+TGG | - | chr3.3:79179710-79179729 | None:intergenic | 40.0% | |
| GCTAGACTTGTGTTAGAAGA+TGG | + | chr3.3:79179464-79179483 | MS.gene31005:CDS | 40.0% | |
| TGACAATTCCAAAACAGACG+AGG | + | chr3.3:79180254-79180273 | MS.gene31005:CDS | 40.0% | |
| TGAGTAACTTCTACTCCTTC+AGG | - | chr3.3:79181660-79181679 | None:intergenic | 40.0% | |
| TGGAGATGTGTGAAGGATTT+GGG | + | chr3.3:79180033-79180052 | MS.gene31005:CDS | 40.0% | |
| TGGGCGATTACTTAACTGAA+AGG | + | chr3.3:79180052-79180071 | MS.gene31005:CDS | 40.0% | |
| TTCGTTCAGCGACTTGAATA+TGG | + | chr3.3:79181941-79181960 | MS.gene31005:intron | 40.0% | |
| TTCTCTGTCAGATGTTCTTC+TGG | + | chr3.3:79179270-79179289 | MS.gene31005:CDS | 40.0% | |
| ! | AGAGACACAATCTTTTGAGC+AGG | - | chr3.3:79181723-79181742 | None:intergenic | 40.0% |
| ! | ATGTCCATGAGTTGACACAA+TGG | - | chr3.3:79181400-79181419 | None:intergenic | 40.0% |
| ! | CCGTGTTGAAATTAGTTCTC+AGG | + | chr3.3:79181095-79181114 | MS.gene31005:CDS | 40.0% |
| ! | GAAGACAGAAACTTTTGCAG+AGG | - | chr3.3:79179253-79179272 | None:intergenic | 40.0% |
| ! | GAGACACAATCTTTTGAGCA+GGG | - | chr3.3:79181722-79181741 | None:intergenic | 40.0% |
| ! | GATGGTGTACTTTTCAGCAA+TGG | + | chr3.3:79180889-79180908 | MS.gene31005:CDS | 40.0% |
| ! | GGGAATACTGGCATCAATTT+TGG | + | chr3.3:79179738-79179757 | MS.gene31005:CDS | 40.0% |
| ! | TGTCCATGAGTTGACACAAT+GGG | - | chr3.3:79181399-79181418 | None:intergenic | 40.0% |
| ! | TTGCTGAAAAGTACACCATC+TGG | - | chr3.3:79180889-79180908 | None:intergenic | 40.0% |
| !! | GCTAAATCATTTGGTGCTTC+AGG | + | chr3.3:79179500-79179519 | MS.gene31005:CDS | 40.0% |
| !!! | ATTGGAAAGGTGCCTGTTTT+TGG | + | chr3.3:79180964-79180983 | MS.gene31005:CDS | 40.0% |
| !!! | GCCTGTTTTTGGAATTTGCA+TGG | + | chr3.3:79180975-79180994 | MS.gene31005:CDS | 40.0% |
| !!! | GTAGGTTTTCATTCGGTGTT+TGG | - | chr3.3:79182050-79182069 | None:intergenic | 40.0% |
| ACAAACTGGCCAGCATAACT+AGG | - | chr3.3:79179696-79179715 | None:intergenic | 45.0% | |
| ACACGTAGATTACGGGAAGA+TGG | + | chr3.3:79180207-79180226 | MS.gene31005:CDS | 45.0% | |
| ATGTGTGTGTTCCATTCCTC+AGG | + | chr3.3:79179649-79179668 | MS.gene31005:intron | 45.0% | |
| CGTGCAAGTCACCATATGAA+TGG | + | chr3.3:79180591-79180610 | MS.gene31005:CDS | 45.0% | |
| CTCAAACTGGAGATGTGTGA+AGG | + | chr3.3:79180026-79180045 | MS.gene31005:CDS | 45.0% | |
| CTCAATGACAGTAGTTGTGC+CGG | + | chr3.3:79181687-79181706 | MS.gene31005:CDS | 45.0% | |
| CTCGTAGCCTTCATTGAAGA+AGG | + | chr3.3:79182275-79182294 | MS.gene31005:CDS | 45.0% | |
| CTGGAGATGTGTGAAGGATT+TGG | + | chr3.3:79180032-79180051 | MS.gene31005:CDS | 45.0% | |
| CTTAGGCGTCTAGCATCATA+TGG | + | chr3.3:79180805-79180824 | MS.gene31005:CDS | 45.0% | |
| CTTCACACATCTCCAGTTTG+AGG | - | chr3.3:79180028-79180047 | None:intergenic | 45.0% | |
| GAACAGGATGATTTCCTCCA+TGG | - | chr3.3:79181059-79181078 | None:intergenic | 45.0% | |
| GCTAGCCCTTGTACAGAAAA+TGG | - | chr3.3:79182239-79182258 | None:intergenic | 45.0% | |
| GGACCTCATGATTCTGACAA+CGG | + | chr3.3:79181768-79181787 | MS.gene31005:CDS | 45.0% | |
| GGCAATCACACGTAGATTAC+GGG | + | chr3.3:79180200-79180219 | MS.gene31005:CDS | 45.0% | |
| GGCACTATCATAGTGAGTTC+TGG | - | chr3.3:79181316-79181335 | None:intergenic | 45.0% | |
| GGGCAATCACACGTAGATTA+CGG | + | chr3.3:79180199-79180218 | MS.gene31005:CDS | 45.0% | |
| GTCATTGAGAGAAAGGGTGA+AGG | - | chr3.3:79179202-79179221 | None:intergenic | 45.0% | |
| TCACCGTTGTCAGAATCATG+AGG | - | chr3.3:79181774-79181793 | None:intergenic | 45.0% | |
| TCACTGTTGTGCCATCTACA+TGG | + | chr3.3:79180836-79180855 | MS.gene31005:CDS | 45.0% | |
| TCATTGTCTGACAGATGACG+AGG | + | chr3.3:79179839-79179858 | MS.gene31005:intron | 45.0% | |
| TCATTTGGTCTGATGAGGGA+GGG | + | chr3.3:79181196-79181215 | MS.gene31005:intron | 45.0% | |
| TCTGTGATTGACAACTCTGC+TGG | + | chr3.3:79180514-79180533 | MS.gene31005:intron | 45.0% | |
| TGCATGGGACATCAATTGCT+TGG | + | chr3.3:79180991-79181010 | MS.gene31005:CDS | 45.0% | |
| TTCATAGAAGGGTCAGAACC+TGG | + | chr3.3:79181259-79181278 | MS.gene31005:intron | 45.0% | |
| TTCATTTGGTCTGATGAGGG+AGG | + | chr3.3:79181195-79181214 | MS.gene31005:intron | 45.0% | |
| TTGTCAGAATCATGAGGTCC+AGG | - | chr3.3:79181768-79181787 | None:intergenic | 45.0% | |
| ! | ACACTGATTGCAGTTGGTGT+AGG | - | chr3.3:79182068-79182087 | None:intergenic | 45.0% |
| ! | CAATGACCTCTTTGGTTCCA+AGG | + | chr3.3:79179215-79179234 | MS.gene31005:CDS | 45.0% |
| ! | GTACTTTTCAGCAATGGTCC+TGG | + | chr3.3:79180895-79180914 | MS.gene31005:CDS | 45.0% |
| ! | GTCCATGAGTTGACACAATG+GGG | - | chr3.3:79181398-79181417 | None:intergenic | 45.0% |
| ! | TCCATGAGTTGACACAATGG+GGG | - | chr3.3:79181397-79181416 | None:intergenic | 45.0% |
| !! | GAAACTTTTGCAGAGGTGTG+TGG | - | chr3.3:79179246-79179265 | None:intergenic | 45.0% |
| ACGGCATAAGGAACAGCAGA+AGG | - | chr3.3:79180925-79180944 | None:intergenic | 50.0% | |
| AGGTTGTACCTCCTAAAGCC+TGG | - | chr3.3:79181017-79181036 | None:intergenic | 50.0% | |
| AGTATCTCTAGGCCCTTCAC+TGG | - | chr3.3:79180651-79180670 | None:intergenic | 50.0% | |
| ATGGGGGGATAACAGAACTG+AGG | - | chr3.3:79181381-79181400 | None:intergenic | 50.0% | |
| CAATTGCTTGGCCAGGCTTT+AGG | + | chr3.3:79181003-79181022 | MS.gene31005:CDS | 50.0% | |
| CAGGGTCAACTGCATAGTTG+TGG | - | chr3.3:79181629-79181648 | None:intergenic | 50.0% | |
| CCAGTTCGAAGGTTACGAAC+AGG | - | chr3.3:79181075-79181094 | None:intergenic | 50.0% | |
| CCTGTTCGTAACCTTCGAAC+TGG | + | chr3.3:79181072-79181091 | MS.gene31005:CDS | 50.0% | |
| CTCTTCCTGTCTCTTTGCGA+TGG | + | chr3.3:79179988-79180007 | MS.gene31005:intron | 50.0% | |
| TCAGCACAGTGCTTCCTTTC+CGG | + | chr3.3:79179864-79179883 | MS.gene31005:CDS | 50.0% | |
| TCTTCTCAAGACAAGGGACC+AGG | - | chr3.3:79181280-79181299 | None:intergenic | 50.0% | |
| TGCTATCCCACCATGCTAGA+AGG | + | chr3.3:79182107-79182126 | MS.gene31005:intron | 50.0% | |
| TGGGGGGATAACAGAACTGA+GGG | - | chr3.3:79181380-79181399 | None:intergenic | 50.0% | |
| TTCTACTCCTTCAGGCAGTG+TGG | - | chr3.3:79181652-79181671 | None:intergenic | 50.0% | |
| TTGAGCAGGGAAAGCAAGAC+CGG | - | chr3.3:79181709-79181728 | None:intergenic | 50.0% | |
| TTTCAACACGGCCAGTTCGA+AGG | - | chr3.3:79181086-79181105 | None:intergenic | 50.0% | |
| ! | CCATGAGTTGACACAATGGG+GGG | - | chr3.3:79181396-79181415 | None:intergenic | 50.0% |
| ! | CTCACTATGATAGTGCCTCG+TGG | + | chr3.3:79181319-79181338 | MS.gene31005:intron | 50.0% |
| ! | GGGAGTTTAGCTCCAGTGAA+GGG | + | chr3.3:79180636-79180655 | MS.gene31005:CDS | 50.0% |
| ! | TGGGAGTTTAGCTCCAGTGA+AGG | + | chr3.3:79180635-79180654 | MS.gene31005:CDS | 50.0% |
| !! | ACTTTTGCAGAGGTGTGTGG+CGG | - | chr3.3:79179243-79179262 | None:intergenic | 50.0% |
| !! | TAGGTAATGGGGAAAGGCCA+TGG | + | chr3.3:79179429-79179448 | MS.gene31005:intron | 50.0% |
| CCCCCCATTGTGTCAACTCA+TGG | + | chr3.3:79181393-79181412 | MS.gene31005:intron | 55.0% | |
| CGAAGCACGAGAACAGAACC+TGG | - | chr3.3:79179913-79179932 | None:intergenic | 55.0% | |
| GAGGTCCAGGAGATGCTTCA+GGG | - | chr3.3:79181755-79181774 | None:intergenic | 55.0% | |
| GGAACAGCAGAAGGATCTCC+AGG | - | chr3.3:79180916-79180935 | None:intergenic | 55.0% | |
| GGCTACGAGCCTATGCCAAT+CGG | - | chr3.3:79182264-79182283 | None:intergenic | 55.0% | |
| GGGACATCAATTGCTTGGCC+AGG | + | chr3.3:79180996-79181015 | MS.gene31005:CDS | 55.0% | |
| GGTGCTTCAGGAACCCAAGT+TGG | + | chr3.3:79179512-79179531 | MS.gene31005:CDS | 55.0% | |
| TCGGATGCTGGCCATGTAGA+TGG | - | chr3.3:79180850-79180869 | None:intergenic | 55.0% | |
| TGAGGTCCAGGAGATGCTTC+AGG | - | chr3.3:79181756-79181775 | None:intergenic | 55.0% | |
| ! | CGGGAAGATGGCAGCCTTAT+TGG | + | chr3.3:79180219-79180238 | MS.gene31005:CDS | 55.0% |
| ! | TACAAGGGCTAGCAGCCGAT+TGG | + | chr3.3:79182246-79182265 | MS.gene31005:intron | 55.0% |
| ! | TACCACCCTGAAGCATCTCC+TGG | + | chr3.3:79181747-79181766 | MS.gene31005:CDS | 55.0% |
| !! | TTGCTTGGCCAGGCTTTAGG+AGG | + | chr3.3:79181006-79181025 | MS.gene31005:CDS | 55.0% |
| ACTCCTTCAGGCAGTGTGGC+AGG | - | chr3.3:79181648-79181667 | None:intergenic | 60.0% | |
| ACTGCGGCACTATAGCGCAG+CGG | + | chr3.3:79180377-79180396 | MS.gene31005:intron | 60.0% | |
| CTCCTTCAGGCAGTGTGGCA+GGG | - | chr3.3:79181647-79181666 | None:intergenic | 60.0% | |
| GGCTAGCAGCCGATTGGCAT+AGG | + | chr3.3:79182252-79182271 | MS.gene31005:CDS | 60.0% | |
| GTCCAGGAGATGCTTCAGGG+TGG | - | chr3.3:79181752-79181771 | None:intergenic | 60.0% | |
| GACCCTGCCACACTGCCTGA+AGG | + | chr3.3:79181642-79181661 | MS.gene31005:CDS | 65.0% | |
| GCGGCGCCTTGGAACCAAAG+AGG | - | chr3.3:79179224-79179243 | None:intergenic | 65.0% | |
| ! | AGAGGTGTGTGGCGGCGCCT+TGG | - | chr3.3:79179235-79179254 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79179180 | 79182301 | 79179180 | ID=MS.gene31005 |
| chr3.3 | mRNA | 79179180 | 79182301 | 79179180 | ID=MS.gene31005.t1;Parent=MS.gene31005 |
| chr3.3 | exon | 79179180 | 79179291 | 79179180 | ID=MS.gene31005.t1.exon1;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79179180 | 79179291 | 79179180 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79179432 | 79179564 | 79179432 | ID=MS.gene31005.t1.exon2;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79179432 | 79179564 | 79179432 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79179671 | 79179759 | 79179671 | ID=MS.gene31005.t1.exon3;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79179671 | 79179759 | 79179671 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79179853 | 79179913 | 79179853 | ID=MS.gene31005.t1.exon4;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79179853 | 79179913 | 79179853 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79180023 | 79180090 | 79180023 | ID=MS.gene31005.t1.exon5;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79180023 | 79180090 | 79180023 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79180184 | 79180312 | 79180184 | ID=MS.gene31005.t1.exon6;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79180184 | 79180312 | 79180184 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79180567 | 79180676 | 79180567 | ID=MS.gene31005.t1.exon7;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79180567 | 79180676 | 79180567 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79180769 | 79181116 | 79180769 | ID=MS.gene31005.t1.exon8;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79180769 | 79181116 | 79180769 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79181624 | 79181789 | 79181624 | ID=MS.gene31005.t1.exon9;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79181624 | 79181789 | 79181624 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| chr3.3 | exon | 79182252 | 79182301 | 79182252 | ID=MS.gene31005.t1.exon10;Parent=MS.gene31005.t1 |
| chr3.3 | CDS | 79182252 | 79182301 | 79182252 | ID=cds.MS.gene31005.t1;Parent=MS.gene31005.t1 |
| Gene Sequence |
| Protein sequence |
