Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049322.t1 | XP_024635676.1 | 98.3 | 405 | 7 | 0 | 1 | 405 | 1 | 405 | 5.10E-236 | 826.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049322.t1 | Q9LVW7 | 73.6 | 413 | 100 | 2 | 1 | 405 | 3 | 414 | 2.8e-182 | 639.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049322.t1 | A0A396IZL0 | 98.3 | 405 | 7 | 0 | 1 | 405 | 1 | 405 | 3.7e-236 | 826.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049322 | MS.gene052302 | 0.802352 | 5.84E-49 | -1.69E-46 |
| MS.gene049322 | MS.gene052856 | 0.814794 | 1.28E-51 | -1.69E-46 |
| MS.gene049322 | MS.gene058182 | 0.827713 | 1.34E-54 | -1.69E-46 |
| MS.gene049322 | MS.gene060297 | 0.804185 | 2.44E-49 | -1.69E-46 |
| MS.gene049322 | MS.gene06447 | 0.824971 | 6.05E-54 | -1.69E-46 |
| MS.gene049322 | MS.gene06503 | 0.807252 | 5.53E-50 | -1.69E-46 |
| MS.gene049322 | MS.gene068549 | 0.80361 | 3.21E-49 | -1.69E-46 |
| MS.gene049322 | MS.gene072564 | 0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene049322 | MS.gene072565 | 0.808787 | 2.61E-50 | -1.69E-46 |
| MS.gene049322 | MS.gene073833 | 0.807285 | 5.45E-50 | -1.69E-46 |
| MS.gene049322 | MS.gene28684 | 0.817891 | 2.61E-52 | -1.69E-46 |
| MS.gene049322 | MS.gene30668 | 0.806176 | 9.34E-50 | -1.69E-46 |
| MS.gene049322 | MS.gene31005 | 0.956483 | 2.65E-114 | -1.69E-46 |
| MS.gene049322 | MS.gene34314 | -0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene049322 | MS.gene34317 | -0.813032 | 3.14E-51 | -1.69E-46 |
| MS.gene049322 | MS.gene41132 | 0.816707 | 4.81E-52 | -1.69E-46 |
| MS.gene049322 | MS.gene44007 | 0.801285 | 9.68E-49 | -1.69E-46 |
| MS.gene049322 | MS.gene68877 | 0.805281 | 1.44E-49 | -1.69E-46 |
| MS.gene049322 | MS.gene68959 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene049322 | MS.gene70325 | 0.801464 | 8.89E-49 | -1.69E-46 |
| MS.gene049322 | MS.gene70819 | 0.800915 | 1.15E-48 | -1.69E-46 |
| MS.gene049322 | MS.gene72128 | 0.80498 | 1.67E-49 | -1.69E-46 |
| MS.gene049322 | MS.gene72130 | 0.828183 | 1.04E-54 | -1.69E-46 |
| MS.gene049322 | MS.gene82983 | 0.816773 | 4.65E-52 | -1.69E-46 |
| MS.gene049322 | MS.gene83188 | 0.806069 | 9.84E-50 | -1.69E-46 |
| MS.gene049322 | MS.gene93202 | 0.823729 | 1.18E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049322.t1 | MTR_4g103830 | 93.349 | 421 | 23 | 2 | 1 | 421 | 1 | 416 | 0.0 | 814 |
| MS.gene049322.t1 | MTR_4g103830 | 96.552 | 406 | 13 | 1 | 1 | 406 | 1 | 405 | 0.0 | 813 |
| MS.gene049322.t1 | MTR_3g095490 | 93.366 | 407 | 12 | 1 | 1 | 407 | 1 | 392 | 0.0 | 782 |
| MS.gene049322.t1 | MTR_3g095490 | 87.961 | 407 | 14 | 2 | 1 | 407 | 1 | 372 | 0.0 | 727 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049322.t1 | AT3G27740 | 73.253 | 415 | 102 | 2 | 1 | 407 | 3 | 416 | 0.0 | 642 |
| MS.gene049322.t1 | AT3G27740 | 77.679 | 224 | 50 | 0 | 184 | 407 | 121 | 344 | 5.80e-134 | 389 |
| MS.gene049322.t1 | AT3G27740 | 59.836 | 122 | 40 | 2 | 1 | 114 | 3 | 123 | 3.42e-36 | 136 |
| MS.gene049322.t1 | AT1G25220 | 29.697 | 165 | 104 | 4 | 244 | 396 | 86 | 250 | 4.26e-11 | 63.9 |
| MS.gene049322.t1 | AT1G25155 | 29.091 | 165 | 105 | 4 | 244 | 396 | 32 | 196 | 9.66e-11 | 62.0 |
| MS.gene049322.t1 | AT1G25083 | 29.091 | 165 | 105 | 4 | 244 | 396 | 32 | 196 | 9.66e-11 | 62.0 |
| MS.gene049322.t1 | AT1G24909 | 29.091 | 165 | 105 | 4 | 244 | 396 | 32 | 196 | 9.66e-11 | 62.0 |
Find 113 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAATACTGGCATCAATTT+TGG | 0.168281 | 3.1:+76195599 | MS.gene049322:CDS |
| CGGGAAGATGGCAGCCTTAT+TGG | 0.173503 | 3.1:+76196080 | MS.gene049322:CDS |
| TCAGCACAGTGCTTCCTTTC+CGG | 0.240008 | 3.1:+76195725 | MS.gene049322:CDS |
| TAATTAGAAGTTTGAGTATC+AGG | 0.243391 | 3.1:+76195753 | MS.gene049322:CDS |
| CTTTCTCTCAATGACCTCTT+TGG | 0.245128 | 3.1:+76195068 | MS.gene049322:CDS |
| CAATTGCTTGGCCAGGCTTT+AGG | 0.266746 | 3.1:+76196864 | MS.gene049322:CDS |
| GCTAAATCATTTGGTGCTTC+AGG | 0.275622 | 3.1:+76195361 | MS.gene049322:CDS |
| TTCTCTGTCAGATGTTCTTC+TGG | 0.292462 | 3.1:+76195131 | MS.gene049322:CDS |
| ACAACCTACAAGATGAAATT+TGG | 0.299468 | 3.1:+76196891 | MS.gene049322:CDS |
| AAGTAATTCCTCGTCTGTTT+TGG | 0.306778 | 3.1:-76196123 | None:intergenic |
| TGTTAGAAGATGGTTCAATT+TGG | 0.310513 | 3.1:+76195335 | MS.gene049322:CDS |
| CTGGAGATGTGTGAAGGATT+TGG | 0.330063 | 3.1:+76195893 | MS.gene049322:CDS |
| TAGGTAGTTGCATACGATTT+TGG | 0.336986 | 3.1:+76196627 | MS.gene049322:intron |
| ATTTGGAAAGCTAAATCATT+TGG | 0.341512 | 3.1:+76195352 | MS.gene049322:CDS |
| TGAGGTCCAGGAGATGCTTC+AGG | 0.357210 | 3.1:-76197614 | None:intergenic |
| TGGATATAACTTCAAAGTTT+CGG | 0.358550 | 3.1:-76196727 | None:intergenic |
| GTGACCAAATTTCATCTTGT+AGG | 0.368330 | 3.1:-76196895 | None:intergenic |
| AACTTCAAAGTTTCGGATGC+TGG | 0.372898 | 3.1:-76196720 | None:intergenic |
| AATCCACATATTGGGAATAC+TGG | 0.375932 | 3.1:+76195587 | MS.gene049322:CDS |
| GTTCTATCAATCCATTCATA+TGG | 0.384320 | 3.1:-76196463 | None:intergenic |
| ACTCCTTCAGGCAGTGTGGC+AGG | 0.385852 | 3.1:-76197506 | None:intergenic |
| GGGCAATCACACGTAGATTA+CGG | 0.396622 | 3.1:+76196060 | MS.gene049322:CDS |
| CTGATGACAAATCCACATAT+TGG | 0.396769 | 3.1:+76195578 | MS.gene049322:CDS |
| TGAAAACAACTTCACCAACT+TGG | 0.401704 | 3.1:-76195387 | None:intergenic |
| TCGGATGCTGGCCATGTAGA+TGG | 0.404003 | 3.1:-76196708 | None:intergenic |
| TGAGTAACTTCTACTCCTTC+AGG | 0.404731 | 3.1:-76197518 | None:intergenic |
| TTTACTGTTTCAACGGCATA+AGG | 0.405190 | 3.1:-76196795 | None:intergenic |
| ATTAATGGCAACAAAAGCTT+TGG | 0.405497 | 3.1:+76195037 | None:intergenic |
| TGCATGAATGTATAGGTAAT+GGG | 0.406728 | 3.1:+76195278 | MS.gene049322:intron |
| TACTTCAGATGTCTAAATCA+TGG | 0.414242 | 3.1:+76196141 | MS.gene049322:CDS |
| CAAACTTCTAATTACTAAAC+CGG | 0.415332 | 3.1:-76195744 | None:intergenic |
| GGCAATCACACGTAGATTAC+GGG | 0.418709 | 3.1:+76196061 | MS.gene049322:CDS |
| TGGAGATGTGTGAAGGATTT+GGG | 0.420135 | 3.1:+76195894 | MS.gene049322:CDS |
| TTGATAGAACAAAGGAAGAA+TGG | 0.426377 | 3.1:+76196476 | MS.gene049322:CDS |
| TGATGACAAATCCACATATT+GGG | 0.432957 | 3.1:+76195579 | MS.gene049322:CDS |
| ATTTATTCAGTACCTCAAAC+TGG | 0.433137 | 3.1:+76195874 | MS.gene049322:intron |
| CAGTGCTCAAAACACCAATA+AGG | 0.434979 | 3.1:-76196094 | None:intergenic |
| TTAACTGATCCTAGTTATGC+TGG | 0.440990 | 3.1:+76195545 | MS.gene049322:CDS |
| CTTCACACATCTCCAGTTTG+AGG | 0.444880 | 3.1:-76195886 | None:intergenic |
| CCGTGTTGAAATTAGTTCTC+AGG | 0.452192 | 3.1:+76196956 | MS.gene049322:CDS |
| GGGACATCAATTGCTTGGCC+AGG | 0.456415 | 3.1:+76196857 | MS.gene049322:CDS |
| TGCATGGGACATCAATTGCT+TGG | 0.457302 | 3.1:+76196852 | MS.gene049322:CDS |
| CTTAGGCGTCTAGCATCATA+TGG | 0.460279 | 3.1:+76196666 | MS.gene049322:CDS |
| CAAAGAGGTCATTGAGAGAA+AGG | 0.466089 | 3.1:-76195067 | None:intergenic |
| GAAACAGTAAAGAATATCAT+TGG | 0.466180 | 3.1:+76196807 | MS.gene049322:CDS |
| TTGCTGAAAAGTACACCATC+TGG | 0.470969 | 3.1:-76196747 | None:intergenic |
| GATTTGTCATCAGCACAAAC+TGG | 0.471155 | 3.1:-76195568 | None:intergenic |
| ACATTATCCTTCTTCAATGA+AGG | 0.472185 | 3.1:-76198143 | None:intergenic |
| GCTAGACTTGTGTTAGAAGA+TGG | 0.472551 | 3.1:+76195325 | MS.gene049322:CDS |
| TACCACCCTGAAGCATCTCC+TGG | 0.473772 | 3.1:+76197608 | MS.gene049322:CDS |
| TGATAGAACAAAGGAAGAAT+GGG | 0.475190 | 3.1:+76196477 | MS.gene049322:CDS |
| GAAAACAACTTCACCAACTT+GGG | 0.481798 | 3.1:-76195386 | None:intergenic |
| CGTGCAAGTCACCATATGAA+TGG | 0.483758 | 3.1:+76196452 | MS.gene049322:CDS |
| GGAACAGCAGAAGGATCTCC+AGG | 0.484183 | 3.1:-76196774 | None:intergenic |
| CAATGACCTCTTTGGTTCCA+AGG | 0.486297 | 3.1:+76195076 | MS.gene049322:CDS |
| ATGCCAGTATTCCCAATATG+TGG | 0.486638 | 3.1:-76195590 | None:intergenic |
| GCAGGTATTGATCTAATAAG+TGG | 0.487567 | 3.1:+76196424 | MS.gene049322:intron |
| GATATTCTTTACTGTTTCAA+CGG | 0.495805 | 3.1:-76196802 | None:intergenic |
| TTGAGCAGGGAAAGCAAGAC+CGG | 0.499137 | 3.1:-76197567 | None:intergenic |
| TCTAAATCATGGGATATTGT+TGG | 0.502781 | 3.1:+76196152 | MS.gene049322:CDS |
| CTCCTTCAGGCAGTGTGGCA+GGG | 0.505914 | 3.1:-76197505 | None:intergenic |
| GAATCAAGCATAATATACTT+AGG | 0.506239 | 3.1:+76196649 | MS.gene049322:CDS |
| AGAGGTGTGTGGCGGCGCCT+TGG | 0.508323 | 3.1:-76195093 | None:intergenic |
| CTCGTAGCCTTCATTGAAGA+AGG | 0.515567 | 3.1:+76198136 | MS.gene049322:CDS |
| CCAGTTCGAAGGTTACGAAC+AGG | 0.516140 | 3.1:-76196933 | None:intergenic |
| CTCAATGACAGTAGTTGTGC+CGG | 0.517106 | 3.1:+76197548 | MS.gene049322:CDS |
| ACAAACTGGCCAGCATAACT+AGG | 0.518582 | 3.1:-76195554 | None:intergenic |
| CTTAACTGAAAGGAATGTCA+TGG | 0.522571 | 3.1:+76195923 | MS.gene049322:CDS |
| TTGTCAGAATCATGAGGTCC+AGG | 0.525671 | 3.1:-76197626 | None:intergenic |
| GAGGTCCAGGAGATGCTTCA+GGG | 0.527220 | 3.1:-76197613 | None:intergenic |
| AGTATCTCTAGGCCCTTCAC+TGG | 0.527684 | 3.1:-76196509 | None:intergenic |
| CCTGTTCGTAACCTTCGAAC+TGG | 0.534549 | 3.1:+76196933 | MS.gene049322:CDS |
| TGGGCGATTACTTAACTGAA+AGG | 0.537172 | 3.1:+76195913 | MS.gene049322:CDS |
| CTTACATGGAAAGTATCTCT+AGG | 0.537477 | 3.1:-76196520 | None:intergenic |
| TAGGTAATGGGGAAAGGCCA+TGG | 0.546071 | 3.1:+76195290 | MS.gene049322:intron |
| GGTGCTTCAGGAACCCAAGT+TGG | 0.546817 | 3.1:+76195373 | MS.gene049322:CDS |
| CAACAGATGATGTTGATACA+AGG | 0.549921 | 3.1:+76196039 | MS.gene049322:intron |
| ACACGTAGATTACGGGAAGA+TGG | 0.551699 | 3.1:+76196068 | MS.gene049322:CDS |
| AAAGAGGTCATTGAGAGAAA+GGG | 0.551745 | 3.1:-76195066 | None:intergenic |
| ACTTCAGATGTCTAAATCAT+GGG | 0.552487 | 3.1:+76196142 | MS.gene049322:CDS |
| GGCTAGCAGCCGATTGGCAT+AGG | 0.554150 | 3.1:+76198113 | MS.gene049322:CDS |
| TACAAGGGCTAGCAGCCGAT+TGG | 0.556106 | 3.1:+76198107 | MS.gene049322:intron |
| TTGCTTGGCCAGGCTTTAGG+AGG | 0.558881 | 3.1:+76196867 | MS.gene049322:CDS |
| AATGTATAGGTAATGGGGAA+AGG | 0.560392 | 3.1:+76195284 | MS.gene049322:intron |
| TCACTGTTGTGCCATCTACA+TGG | 0.561762 | 3.1:+76196697 | MS.gene049322:CDS |
| GAACAGGATGATTTCCTCCA+TGG | 0.563497 | 3.1:-76196917 | None:intergenic |
| TTTCAACACGGCCAGTTCGA+AGG | 0.571733 | 3.1:-76196944 | None:intergenic |
| GCATGAATGTATAGGTAATG+GGG | 0.572178 | 3.1:+76195279 | MS.gene049322:intron |
| CAGGGTCAACTGCATAGTTG+TGG | 0.573224 | 3.1:-76197487 | None:intergenic |
| AGGTTGTACCTCCTAAAGCC+TGG | 0.573954 | 3.1:-76196875 | None:intergenic |
| AGTAAAGAATATCATTGGAA+AGG | 0.576011 | 3.1:+76196812 | MS.gene049322:CDS |
| GGCTACGAGCCTATGCCAAT+CGG | 0.576216 | 3.1:-76198122 | None:intergenic |
| GACCCTGCCACACTGCCTGA+AGG | 0.593729 | 3.1:+76197503 | MS.gene049322:CDS |
| TTAACTGAAAGGAATGTCAT+GGG | 0.597258 | 3.1:+76195924 | MS.gene049322:CDS |
| GTCATTGAGAGAAAGGGTGA+AGG | 0.598395 | 3.1:-76195060 | None:intergenic |
| TGGGAGTTTAGCTCCAGTGA+AGG | 0.599112 | 3.1:+76196496 | MS.gene049322:CDS |
| ACGGCATAAGGAACAGCAGA+AGG | 0.606024 | 3.1:-76196783 | None:intergenic |
| CTCAAACTGGAGATGTGTGA+AGG | 0.613677 | 3.1:+76195887 | MS.gene049322:CDS |
| ACTTTGAAGTTATATCCAGA+TGG | 0.617701 | 3.1:+76196732 | MS.gene049322:CDS |
| AAGATGAAATTTGGTCACCA+TGG | 0.620210 | 3.1:+76196900 | MS.gene049322:CDS |
| ATGAAATTTGGTCACCATGG+AGG | 0.624582 | 3.1:+76196903 | MS.gene049322:CDS |
| TTCTAATTACTAAACCGGAA+AGG | 0.626092 | 3.1:-76195739 | None:intergenic |
| TGAATGGATTGATAGAACAA+AGG | 0.627214 | 3.1:+76196468 | MS.gene049322:CDS |
| GGGAGTTTAGCTCCAGTGAA+GGG | 0.629622 | 3.1:+76196497 | MS.gene049322:CDS |
| AACAGATGATGTTGATACAA+GGG | 0.640054 | 3.1:+76196040 | MS.gene049322:intron |
| GGACCTCATGATTCTGACAA+CGG | 0.640994 | 3.1:+76197629 | MS.gene049322:CDS |
| GCGGCGCCTTGGAACCAAAG+AGG | 0.643056 | 3.1:-76195082 | None:intergenic |
| TTCTACTCCTTCAGGCAGTG+TGG | 0.658466 | 3.1:-76197510 | None:intergenic |
| TCATTGTCTGACAGATGACG+AGG | 0.685177 | 3.1:+76195700 | MS.gene049322:intron |
| TCACCGTTGTCAGAATCATG+AGG | 0.688390 | 3.1:-76197632 | None:intergenic |
| CCTGAGAACTAATTTCAACA+CGG | 0.701914 | 3.1:-76196956 | None:intergenic |
| TGACAATTCCAAAACAGACG+AGG | 0.706266 | 3.1:+76196115 | MS.gene049322:CDS |
| GTCCAGGAGATGCTTCAGGG+TGG | 0.722700 | 3.1:-76197610 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTGATACATATAAAT+TGG | + | chr3.1:76197459-76197478 | MS.gene049322:intron | 10.0% |
| !!! | TTTTTTTCATAATTATTTGT+TGG | + | chr3.1:76195172-76195191 | MS.gene049322:intron | 10.0% |
| !! | AATAAATAAAAAATTGCAAC+TGG | + | chr3.1:76197207-76197226 | MS.gene049322:intron | 15.0% |
| !! | ATATCACAAGATTTATAATT+TGG | - | chr3.1:76195434-76195453 | None:intergenic | 15.0% |
| !! | TGATAATAAATATAACTGTT+TGG | + | chr3.1:76197691-76197710 | MS.gene049322:intron | 15.0% |
| !! | TTTAAACAAACCATAAATAT+AGG | - | chr3.1:76197359-76197378 | None:intergenic | 15.0% |
| !!! | AAATTTTTTAAAGATTGTGA+AGG | - | chr3.1:76197717-76197736 | None:intergenic | 15.0% |
| !!! | ATAGCATAAAATTTTGAATA+TGG | + | chr3.1:76197297-76197316 | MS.gene049322:intron | 15.0% |
| !! | AAAAATTTATATTCAAGAGC+AGG | + | chr3.1:76197729-76197748 | MS.gene049322:intron | 20.0% |
| !! | TAAATCCATTTGAATTCATT+TGG | + | chr3.1:76197042-76197061 | MS.gene049322:intron | 20.0% |
| !! | TTAAGTAATTACCATGATTA+CGG | - | chr3.1:76197025-76197044 | None:intergenic | 20.0% |
| !!! | AAAAAAGACAACATTTTTCA+TGG | - | chr3.1:76195206-76195225 | None:intergenic | 20.0% |
| !!! | AAAAAGACAACATTTTTCAT+GGG | - | chr3.1:76195205-76195224 | None:intergenic | 20.0% |
| !!! | AAATGTTGTCTTTTTTGATT+AGG | + | chr3.1:76195210-76195229 | MS.gene049322:intron | 20.0% |
| !!! | ATATTTTTTGCTTCATAGAA+GGG | + | chr3.1:76197109-76197128 | MS.gene049322:intron | 20.0% |
| !!! | GATATTCTTTTGTTGTTTTA+TGG | + | chr3.1:76195449-76195468 | MS.gene049322:intron | 20.0% |
| !!! | GTATTTTATTCTTTTTGTCA+TGG | + | chr3.1:76197425-76197444 | MS.gene049322:intron | 20.0% |
| !!! | TATATTTTTTGCTTCATAGA+AGG | + | chr3.1:76197108-76197127 | MS.gene049322:intron | 20.0% |
| ! | AAATGAATGCATGAATGTAT+AGG | + | chr3.1:76195271-76195290 | MS.gene049322:intron | 25.0% |
| ! | AATGAAACAGAAACTCAATT+AGG | - | chr3.1:76195486-76195505 | None:intergenic | 25.0% |
| ! | ACGAAATTGTAAAAGCAAAT+TGG | - | chr3.1:76197787-76197806 | None:intergenic | 25.0% |
| ! | AGTAAAGAATATCATTGGAA+AGG | + | chr3.1:76196812-76196831 | MS.gene049322:CDS | 25.0% |
| ! | ATTTGGAAAGCTAAATCATT+TGG | + | chr3.1:76195352-76195371 | MS.gene049322:CDS | 25.0% |
| ! | CAAACTTCTAATTACTAAAC+CGG | - | chr3.1:76195747-76195766 | None:intergenic | 25.0% |
| ! | GAAACAGTAAAGAATATCAT+TGG | + | chr3.1:76196807-76196826 | MS.gene049322:CDS | 25.0% |
| ! | GAATCAAGCATAATATACTT+AGG | + | chr3.1:76196649-76196668 | MS.gene049322:CDS | 25.0% |
| ! | GATATTCTTTACTGTTTCAA+CGG | - | chr3.1:76196805-76196824 | None:intergenic | 25.0% |
| ! | TAATTAGAAGTTTGAGTATC+AGG | + | chr3.1:76195753-76195772 | MS.gene049322:CDS | 25.0% |
| ! | TATGTGTAGTCCTATATTTA+TGG | + | chr3.1:76197346-76197365 | MS.gene049322:intron | 25.0% |
| ! | TGGATATAACTTCAAAGTTT+CGG | - | chr3.1:76196730-76196749 | None:intergenic | 25.0% |
| ! | TTAAAATTTCTTGATACCTG+AGG | - | chr3.1:76195529-76195548 | None:intergenic | 25.0% |
| ! | TTACCCAAAATTCAACAAAA+GGG | - | chr3.1:76196574-76196593 | None:intergenic | 25.0% |
| ! | TTCTTAGTAGTTTCTATCTA+TGG | + | chr3.1:76198024-76198043 | MS.gene049322:intron | 25.0% |
| !! | CTTGATAACATGTAATGATA+TGG | - | chr3.1:76197386-76197405 | None:intergenic | 25.0% |
| !!! | AAATTTTATGCTATTTCCAC+AGG | - | chr3.1:76197291-76197310 | None:intergenic | 25.0% |
| !!! | TTTTATTTATTTTTGCCACG+AGG | - | chr3.1:76197198-76197217 | None:intergenic | 25.0% |
| !!! | TTTTCAATACATCATTGACT+GGG | + | chr3.1:76195404-76195423 | MS.gene049322:CDS | 25.0% |
| !!! | TTTTTTGATTAGGTGTAGTT+GGG | + | chr3.1:76195220-76195239 | MS.gene049322:intron | 25.0% |
| AAAGTATGTGATAAAAGCTC+AGG | + | chr3.1:76198001-76198020 | MS.gene049322:intron | 30.0% | |
| AACAGATGATGTTGATACAA+GGG | + | chr3.1:76196040-76196059 | MS.gene049322:intron | 30.0% | |
| AATACTTTATCCTTCTAGCA+TGG | - | chr3.1:76197981-76198000 | None:intergenic | 30.0% | |
| ACAACCTACAAGATGAAATT+TGG | + | chr3.1:76196891-76196910 | MS.gene049322:CDS | 30.0% | |
| ACTTCAGATGTCTAAATCAT+GGG | + | chr3.1:76196142-76196161 | MS.gene049322:CDS | 30.0% | |
| AGAAAGTAAAGCTCAATCAA+CGG | - | chr3.1:76195807-76195826 | None:intergenic | 30.0% | |
| ATCACAACAGTGGTTATTAT+TGG | - | chr3.1:76197834-76197853 | None:intergenic | 30.0% | |
| ATGCATGAATGTATAGGTAA+TGG | + | chr3.1:76195277-76195296 | MS.gene049322:intron | 30.0% | |
| ATTATCAACAATCACAACAG+TGG | - | chr3.1:76197844-76197863 | None:intergenic | 30.0% | |
| ATTTATTCAGTACCTCAAAC+TGG | + | chr3.1:76195874-76195893 | MS.gene049322:intron | 30.0% | |
| CTTACCCAAAATTCAACAAA+AGG | - | chr3.1:76196575-76196594 | None:intergenic | 30.0% | |
| GCTCTTTATCAAAAGAAGTT+TGG | + | chr3.1:76197666-76197685 | MS.gene049322:intron | 30.0% | |
| GTCTTGTAGGATATAATCAT+TGG | + | chr3.1:76197759-76197778 | MS.gene049322:intron | 30.0% | |
| GTTCTATCAATCCATTCATA+TGG | - | chr3.1:76196466-76196485 | None:intergenic | 30.0% | |
| TACTTCAGATGTCTAAATCA+TGG | + | chr3.1:76196141-76196160 | MS.gene049322:CDS | 30.0% | |
| TCAGACCAAATGAATTCAAA+TGG | - | chr3.1:76197050-76197069 | None:intergenic | 30.0% | |
| TCCATGTAAGTTTATACAGT+AGG | + | chr3.1:76196533-76196552 | MS.gene049322:intron | 30.0% | |
| TCTAAATCATGGGATATTGT+TGG | + | chr3.1:76196152-76196171 | MS.gene049322:CDS | 30.0% | |
| TGATAGAACAAAGGAAGAAT+GGG | + | chr3.1:76196477-76196496 | MS.gene049322:CDS | 30.0% | |
| TGATGACAAATCCACATATT+GGG | + | chr3.1:76195579-76195598 | MS.gene049322:CDS | 30.0% | |
| TGCATGAATGTATAGGTAAT+GGG | + | chr3.1:76195278-76195297 | MS.gene049322:intron | 30.0% | |
| TGTTAGAAGATGGTTCAATT+TGG | + | chr3.1:76195335-76195354 | MS.gene049322:CDS | 30.0% | |
| TTAACTGAAAGGAATGTCAT+GGG | + | chr3.1:76195924-76195943 | MS.gene049322:CDS | 30.0% | |
| TTCTAATTACTAAACCGGAA+AGG | - | chr3.1:76195742-76195761 | None:intergenic | 30.0% | |
| TTGATAGAACAAAGGAAGAA+TGG | + | chr3.1:76196476-76196495 | MS.gene049322:CDS | 30.0% | |
| ! | ACTCCCTTTTGTTGAATTTT+GGG | + | chr3.1:76196568-76196587 | MS.gene049322:intron | 30.0% |
| ! | ATTATTACACTGATTGCAGT+TGG | - | chr3.1:76197935-76197954 | None:intergenic | 30.0% |
| ! | ATTCTTTTCTTCTCAAGACA+AGG | - | chr3.1:76197148-76197167 | None:intergenic | 30.0% |
| ! | ATTCTTTTTGTCATGGTCTT+TGG | + | chr3.1:76197432-76197451 | MS.gene049322:intron | 30.0% |
| ! | CTATGGTTTGTAGATGAATA+AGG | + | chr3.1:76198041-76198060 | MS.gene049322:intron | 30.0% |
| ! | GTTTTCAATACATCATTGAC+TGG | + | chr3.1:76195403-76195422 | MS.gene049322:CDS | 30.0% |
| ! | TTCTTTTCTTCTCAAGACAA+GGG | - | chr3.1:76197147-76197166 | None:intergenic | 30.0% |
| ! | TTGAAATTAGTTCTCAGGTA+TGG | + | chr3.1:76196961-76196980 | MS.gene049322:intron | 30.0% |
| ! | TTGTTGGTAAGAATGACTAT+TGG | + | chr3.1:76196168-76196187 | MS.gene049322:intron | 30.0% |
| !! | ACTTTGAAGTTATATCCAGA+TGG | + | chr3.1:76196732-76196751 | MS.gene049322:CDS | 30.0% |
| !! | GTACTGATGAATGATCTTTT+AGG | + | chr3.1:76196608-76196627 | MS.gene049322:intron | 30.0% |
| !! | TCAAGAGATGGTTTTTAAAG+TGG | - | chr3.1:76195679-76195698 | None:intergenic | 30.0% |
| !! | TGAATGGATTGATAGAACAA+AGG | + | chr3.1:76196468-76196487 | MS.gene049322:CDS | 30.0% |
| !!! | CTTTTTTGATTAGGTGTAGT+TGG | + | chr3.1:76195219-76195238 | MS.gene049322:intron | 30.0% |
| !!! | TTGTTGATAATGCAGCTTTT+CGG | + | chr3.1:76197853-76197872 | MS.gene049322:intron | 30.0% |
| AAAGAGGTCATTGAGAGAAA+GGG | - | chr3.1:76195069-76195088 | None:intergenic | 35.0% | |
| AAATTCAACAAAAGGGAGTC+AGG | - | chr3.1:76196567-76196586 | None:intergenic | 35.0% | |
| AAGATGAAATTTGGTCACCA+TGG | + | chr3.1:76196900-76196919 | MS.gene049322:CDS | 35.0% | |
| AAGTTTATACAGTAGGCTGT+TGG | + | chr3.1:76196540-76196559 | MS.gene049322:intron | 35.0% | |
| AATCCACATATTGGGAATAC+TGG | + | chr3.1:76195587-76195606 | MS.gene049322:CDS | 35.0% | |
| AATTCAACAAAAGGGAGTCA+GGG | - | chr3.1:76196566-76196585 | None:intergenic | 35.0% | |
| AATTCAGTGTTGTCAAACTG+CGG | + | chr3.1:76196222-76196241 | MS.gene049322:intron | 35.0% | |
| AGAACGTTACATGTAAACTC+TGG | + | chr3.1:76195982-76196001 | MS.gene049322:intron | 35.0% | |
| ATTTCTTGATACCTGAGGAA+TGG | - | chr3.1:76195524-76195543 | None:intergenic | 35.0% | |
| CAACAGATGATGTTGATACA+AGG | + | chr3.1:76196039-76196058 | MS.gene049322:intron | 35.0% | |
| CCTGAGAACTAATTTCAACA+CGG | - | chr3.1:76196959-76196978 | None:intergenic | 35.0% | |
| CTGATGACAAATCCACATAT+TGG | + | chr3.1:76195578-76195597 | MS.gene049322:CDS | 35.0% | |
| CTTAACTGAAAGGAATGTCA+TGG | + | chr3.1:76195923-76195942 | MS.gene049322:CDS | 35.0% | |
| GAAAACAACTTCACCAACTT+GGG | - | chr3.1:76195389-76195408 | None:intergenic | 35.0% | |
| GAAAATCTTGATCAACTCCA+AGG | - | chr3.1:76198071-76198090 | None:intergenic | 35.0% | |
| GAAGAGACAAAGAGTAAGTA+TGG | - | chr3.1:76195835-76195854 | None:intergenic | 35.0% | |
| GAATTCATTTGGTCTGATGA+GGG | + | chr3.1:76197053-76197072 | MS.gene049322:intron | 35.0% | |
| GCATGAATGTATAGGTAATG+GGG | + | chr3.1:76195279-76195298 | MS.gene049322:intron | 35.0% | |
| GCCTACTGTATAAACTTACA+TGG | - | chr3.1:76196537-76196556 | None:intergenic | 35.0% | |
| GCTCAATCAACGGAAAATAT+TGG | - | chr3.1:76195797-76195816 | None:intergenic | 35.0% | |
| GTGACCAAATTTCATCTTGT+AGG | - | chr3.1:76196898-76196917 | None:intergenic | 35.0% | |
| TAGATGAATAAGGACTTCCT+TGG | + | chr3.1:76198051-76198070 | MS.gene049322:intron | 35.0% | |
| TCAGACAATGAATCAAGAGA+TGG | - | chr3.1:76195691-76195710 | None:intergenic | 35.0% | |
| TCATCATTTCACCGTAATCA+TGG | + | chr3.1:76197011-76197030 | MS.gene049322:intron | 35.0% | |
| TGAAAACAACTTCACCAACT+TGG | - | chr3.1:76195390-76195409 | None:intergenic | 35.0% | |
| TGAATTCATTTGGTCTGATG+AGG | + | chr3.1:76197052-76197071 | MS.gene049322:intron | 35.0% | |
| TTAACTGATCCTAGTTATGC+TGG | + | chr3.1:76195545-76195564 | MS.gene049322:CDS | 35.0% | |
| TTGGTAAGAATGACTATTGG+AGG | + | chr3.1:76196171-76196190 | MS.gene049322:intron | 35.0% | |
| TTTACTGTTTCAACGGCATA+AGG | - | chr3.1:76196798-76196817 | None:intergenic | 35.0% | |
| ! | AAGTAATTCCTCGTCTGTTT+TGG | - | chr3.1:76196126-76196145 | None:intergenic | 35.0% |
| ! | CTAGCATCTGAATTTTTCCA+TGG | - | chr3.1:76195310-76195329 | None:intergenic | 35.0% |
| ! | GACTCCCTTTTGTTGAATTT+TGG | + | chr3.1:76196567-76196586 | MS.gene049322:intron | 35.0% |
| ! | GGCTTATGTTTCTTATTTGC+AGG | + | chr3.1:76196406-76196425 | MS.gene049322:intron | 35.0% |
| ! | TAGGTAGTTGCATACGATTT+TGG | + | chr3.1:76196627-76196646 | MS.gene049322:intron | 35.0% |
| ! | TGTGTCCATTTTCTGTACAA+GGG | + | chr3.1:76198092-76198111 | MS.gene049322:intron | 35.0% |
| ! | TTGTGTCCATTTTCTGTACA+AGG | + | chr3.1:76198091-76198110 | MS.gene049322:intron | 35.0% |
| !! | AATGTATAGGTAATGGGGAA+AGG | + | chr3.1:76195284-76195303 | MS.gene049322:intron | 35.0% |
| !! | AGTTGGTGTAGGTTTTCATT+CGG | - | chr3.1:76197918-76197937 | None:intergenic | 35.0% |
| !! | CTTACATGGAAAGTATCTCT+AGG | - | chr3.1:76196523-76196542 | None:intergenic | 35.0% |
| !! | GCAGGTATTGATCTAATAAG+TGG | + | chr3.1:76196424-76196443 | MS.gene049322:intron | 35.0% |
| !!! | CCTGTTTTTGGAATTTGCAT+GGG | + | chr3.1:76196837-76196856 | MS.gene049322:CDS | 35.0% |
| !!! | TGTTGATAATGCAGCTTTTC+GGG | + | chr3.1:76197854-76197873 | MS.gene049322:intron | 35.0% |
| !!! | TTTTAAAGTGGACTAGCACA+AGG | - | chr3.1:76195667-76195686 | None:intergenic | 35.0% |
| AACTTCAAAGTTTCGGATGC+TGG | - | chr3.1:76196723-76196742 | None:intergenic | 40.0% | |
| AATATCCATCGCAAAGAGAC+AGG | - | chr3.1:76195857-76195876 | None:intergenic | 40.0% | |
| ACAACTCTGCTGGAATTACA+TGG | + | chr3.1:76196385-76196404 | MS.gene049322:intron | 40.0% | |
| ACTTTATCCTTCTAGCATGG+TGG | - | chr3.1:76197978-76197997 | None:intergenic | 40.0% | |
| AGCAGGATTATGTGTCTTGT+AGG | + | chr3.1:76197746-76197765 | MS.gene049322:intron | 40.0% | |
| ATGAAATTTGGTCACCATGG+AGG | + | chr3.1:76196903-76196922 | MS.gene049322:CDS | 40.0% | |
| ATGCCAGTATTCCCAATATG+TGG | - | chr3.1:76195593-76195612 | None:intergenic | 40.0% | |
| CAAAGAGGTCATTGAGAGAA+AGG | - | chr3.1:76195070-76195089 | None:intergenic | 40.0% | |
| CAGTGCTCAAAACACCAATA+AGG | - | chr3.1:76196097-76196116 | None:intergenic | 40.0% | |
| CATGGACATTATTAGACCTG+TGG | + | chr3.1:76197272-76197291 | MS.gene049322:intron | 40.0% | |
| CCCATGCAAATTCCAAAAAC+AGG | - | chr3.1:76196840-76196859 | None:intergenic | 40.0% | |
| CTTTATCCTTCTAGCATGGT+GGG | - | chr3.1:76197977-76197996 | None:intergenic | 40.0% | |
| CTTTCTCTCAATGACCTCTT+TGG | + | chr3.1:76195068-76195087 | MS.gene049322:CDS | 40.0% | |
| GATTTGTCATCAGCACAAAC+TGG | - | chr3.1:76195571-76195590 | None:intergenic | 40.0% | |
| GCTAGACTTGTGTTAGAAGA+TGG | + | chr3.1:76195325-76195344 | MS.gene049322:CDS | 40.0% | |
| TGACAATTCCAAAACAGACG+AGG | + | chr3.1:76196115-76196134 | MS.gene049322:CDS | 40.0% | |
| TGAGTAACTTCTACTCCTTC+AGG | - | chr3.1:76197521-76197540 | None:intergenic | 40.0% | |
| TGGAGATGTGTGAAGGATTT+GGG | + | chr3.1:76195894-76195913 | MS.gene049322:CDS | 40.0% | |
| TGGGCGATTACTTAACTGAA+AGG | + | chr3.1:76195913-76195932 | MS.gene049322:CDS | 40.0% | |
| TTCGTTCAGCGACTTGAATA+TGG | + | chr3.1:76197802-76197821 | MS.gene049322:intron | 40.0% | |
| TTCTCTGTCAGATGTTCTTC+TGG | + | chr3.1:76195131-76195150 | MS.gene049322:CDS | 40.0% | |
| ! | AGAGACACAATCTTTTGAGC+AGG | - | chr3.1:76197584-76197603 | None:intergenic | 40.0% |
| ! | ATGTCCATGAGTTGACACAA+TGG | - | chr3.1:76197261-76197280 | None:intergenic | 40.0% |
| ! | CCGTGTTGAAATTAGTTCTC+AGG | + | chr3.1:76196956-76196975 | MS.gene049322:CDS | 40.0% |
| ! | GAAGACAGAAACTTTTGCAG+AGG | - | chr3.1:76195114-76195133 | None:intergenic | 40.0% |
| ! | GAGACACAATCTTTTGAGCA+GGG | - | chr3.1:76197583-76197602 | None:intergenic | 40.0% |
| ! | GATGGTGTACTTTTCAGCAA+TGG | + | chr3.1:76196750-76196769 | MS.gene049322:CDS | 40.0% |
| ! | GGGAATACTGGCATCAATTT+TGG | + | chr3.1:76195599-76195618 | MS.gene049322:CDS | 40.0% |
| ! | TGTCCATGAGTTGACACAAT+GGG | - | chr3.1:76197260-76197279 | None:intergenic | 40.0% |
| ! | TTGCTGAAAAGTACACCATC+TGG | - | chr3.1:76196750-76196769 | None:intergenic | 40.0% |
| !! | GCTAAATCATTTGGTGCTTC+AGG | + | chr3.1:76195361-76195380 | MS.gene049322:CDS | 40.0% |
| !!! | ATTGGAAAGGTGCCTGTTTT+TGG | + | chr3.1:76196825-76196844 | MS.gene049322:CDS | 40.0% |
| !!! | GCCTGTTTTTGGAATTTGCA+TGG | + | chr3.1:76196836-76196855 | MS.gene049322:CDS | 40.0% |
| !!! | GTAGGTTTTCATTCGGTGTT+TGG | - | chr3.1:76197911-76197930 | None:intergenic | 40.0% |
| ACAAACTGGCCAGCATAACT+AGG | - | chr3.1:76195557-76195576 | None:intergenic | 45.0% | |
| ACACGTAGATTACGGGAAGA+TGG | + | chr3.1:76196068-76196087 | MS.gene049322:CDS | 45.0% | |
| ATGTGTGTGTTCCATTCCTC+AGG | + | chr3.1:76195510-76195529 | MS.gene049322:intron | 45.0% | |
| CGTGCAAGTCACCATATGAA+TGG | + | chr3.1:76196452-76196471 | MS.gene049322:CDS | 45.0% | |
| CTCAAACTGGAGATGTGTGA+AGG | + | chr3.1:76195887-76195906 | MS.gene049322:CDS | 45.0% | |
| CTCAATGACAGTAGTTGTGC+CGG | + | chr3.1:76197548-76197567 | MS.gene049322:CDS | 45.0% | |
| CTCGTAGCCTTCATTGAAGA+AGG | + | chr3.1:76198136-76198155 | MS.gene049322:CDS | 45.0% | |
| CTGGAGATGTGTGAAGGATT+TGG | + | chr3.1:76195893-76195912 | MS.gene049322:CDS | 45.0% | |
| CTTAGGCGTCTAGCATCATA+TGG | + | chr3.1:76196666-76196685 | MS.gene049322:CDS | 45.0% | |
| CTTCACACATCTCCAGTTTG+AGG | - | chr3.1:76195889-76195908 | None:intergenic | 45.0% | |
| GAACAGGATGATTTCCTCCA+TGG | - | chr3.1:76196920-76196939 | None:intergenic | 45.0% | |
| GCTAGCCCTTGTACAGAAAA+TGG | - | chr3.1:76198100-76198119 | None:intergenic | 45.0% | |
| GGACCTCATGATTCTGACAA+CGG | + | chr3.1:76197629-76197648 | MS.gene049322:CDS | 45.0% | |
| GGCAATCACACGTAGATTAC+GGG | + | chr3.1:76196061-76196080 | MS.gene049322:CDS | 45.0% | |
| GGCACTATCATAGTGAGTTC+TGG | - | chr3.1:76197177-76197196 | None:intergenic | 45.0% | |
| GGGCAATCACACGTAGATTA+CGG | + | chr3.1:76196060-76196079 | MS.gene049322:CDS | 45.0% | |
| GTCATTGAGAGAAAGGGTGA+AGG | - | chr3.1:76195063-76195082 | None:intergenic | 45.0% | |
| TCACCGTTGTCAGAATCATG+AGG | - | chr3.1:76197635-76197654 | None:intergenic | 45.0% | |
| TCACTGTTGTGCCATCTACA+TGG | + | chr3.1:76196697-76196716 | MS.gene049322:CDS | 45.0% | |
| TCATTGTCTGACAGATGACG+AGG | + | chr3.1:76195700-76195719 | MS.gene049322:intron | 45.0% | |
| TCATTTGGTCTGATGAGGGA+GGG | + | chr3.1:76197057-76197076 | MS.gene049322:intron | 45.0% | |
| TCTGTGATTGACAACTCTGC+TGG | + | chr3.1:76196375-76196394 | MS.gene049322:intron | 45.0% | |
| TGCATGGGACATCAATTGCT+TGG | + | chr3.1:76196852-76196871 | MS.gene049322:CDS | 45.0% | |
| TTCATAGAAGGGTCAGAACC+TGG | + | chr3.1:76197120-76197139 | MS.gene049322:intron | 45.0% | |
| TTCATTTGGTCTGATGAGGG+AGG | + | chr3.1:76197056-76197075 | MS.gene049322:intron | 45.0% | |
| TTGTCAGAATCATGAGGTCC+AGG | - | chr3.1:76197629-76197648 | None:intergenic | 45.0% | |
| ! | ACACTGATTGCAGTTGGTGT+AGG | - | chr3.1:76197929-76197948 | None:intergenic | 45.0% |
| ! | CAATGACCTCTTTGGTTCCA+AGG | + | chr3.1:76195076-76195095 | MS.gene049322:CDS | 45.0% |
| ! | GTACTTTTCAGCAATGGTCC+TGG | + | chr3.1:76196756-76196775 | MS.gene049322:CDS | 45.0% |
| ! | GTCCATGAGTTGACACAATG+GGG | - | chr3.1:76197259-76197278 | None:intergenic | 45.0% |
| ! | TCCATGAGTTGACACAATGG+GGG | - | chr3.1:76197258-76197277 | None:intergenic | 45.0% |
| !! | GAAACTTTTGCAGAGGTGTG+TGG | - | chr3.1:76195107-76195126 | None:intergenic | 45.0% |
| ACGGCATAAGGAACAGCAGA+AGG | - | chr3.1:76196786-76196805 | None:intergenic | 50.0% | |
| AGGTTGTACCTCCTAAAGCC+TGG | - | chr3.1:76196878-76196897 | None:intergenic | 50.0% | |
| AGTATCTCTAGGCCCTTCAC+TGG | - | chr3.1:76196512-76196531 | None:intergenic | 50.0% | |
| ATGGGGGGATAACAGAACTG+AGG | - | chr3.1:76197242-76197261 | None:intergenic | 50.0% | |
| CAATTGCTTGGCCAGGCTTT+AGG | + | chr3.1:76196864-76196883 | MS.gene049322:CDS | 50.0% | |
| CAGGGTCAACTGCATAGTTG+TGG | - | chr3.1:76197490-76197509 | None:intergenic | 50.0% | |
| CCAGTTCGAAGGTTACGAAC+AGG | - | chr3.1:76196936-76196955 | None:intergenic | 50.0% | |
| CCTGTTCGTAACCTTCGAAC+TGG | + | chr3.1:76196933-76196952 | MS.gene049322:CDS | 50.0% | |
| CTCTTCCTGTCTCTTTGCGA+TGG | + | chr3.1:76195849-76195868 | MS.gene049322:intron | 50.0% | |
| TCAGCACAGTGCTTCCTTTC+CGG | + | chr3.1:76195725-76195744 | MS.gene049322:CDS | 50.0% | |
| TCTTCTCAAGACAAGGGACC+AGG | - | chr3.1:76197141-76197160 | None:intergenic | 50.0% | |
| TGCTATCCCACCATGCTAGA+AGG | + | chr3.1:76197968-76197987 | MS.gene049322:intron | 50.0% | |
| TGGGGGGATAACAGAACTGA+GGG | - | chr3.1:76197241-76197260 | None:intergenic | 50.0% | |
| TTCTACTCCTTCAGGCAGTG+TGG | - | chr3.1:76197513-76197532 | None:intergenic | 50.0% | |
| TTGAGCAGGGAAAGCAAGAC+CGG | - | chr3.1:76197570-76197589 | None:intergenic | 50.0% | |
| TTTCAACACGGCCAGTTCGA+AGG | - | chr3.1:76196947-76196966 | None:intergenic | 50.0% | |
| ! | CCATGAGTTGACACAATGGG+GGG | - | chr3.1:76197257-76197276 | None:intergenic | 50.0% |
| ! | CTCACTATGATAGTGCCTCG+TGG | + | chr3.1:76197180-76197199 | MS.gene049322:intron | 50.0% |
| ! | GGGAGTTTAGCTCCAGTGAA+GGG | + | chr3.1:76196497-76196516 | MS.gene049322:CDS | 50.0% |
| ! | TGGGAGTTTAGCTCCAGTGA+AGG | + | chr3.1:76196496-76196515 | MS.gene049322:CDS | 50.0% |
| !! | ACTTTTGCAGAGGTGTGTGG+CGG | - | chr3.1:76195104-76195123 | None:intergenic | 50.0% |
| !! | TAGGTAATGGGGAAAGGCCA+TGG | + | chr3.1:76195290-76195309 | MS.gene049322:intron | 50.0% |
| CCCCCCATTGTGTCAACTCA+TGG | + | chr3.1:76197254-76197273 | MS.gene049322:intron | 55.0% | |
| GAGGTCCAGGAGATGCTTCA+GGG | - | chr3.1:76197616-76197635 | None:intergenic | 55.0% | |
| GGAACAGCAGAAGGATCTCC+AGG | - | chr3.1:76196777-76196796 | None:intergenic | 55.0% | |
| GGCTACGAGCCTATGCCAAT+CGG | - | chr3.1:76198125-76198144 | None:intergenic | 55.0% | |
| GGGACATCAATTGCTTGGCC+AGG | + | chr3.1:76196857-76196876 | MS.gene049322:CDS | 55.0% | |
| GGTGCTTCAGGAACCCAAGT+TGG | + | chr3.1:76195373-76195392 | MS.gene049322:CDS | 55.0% | |
| TCGGATGCTGGCCATGTAGA+TGG | - | chr3.1:76196711-76196730 | None:intergenic | 55.0% | |
| TGAGGTCCAGGAGATGCTTC+AGG | - | chr3.1:76197617-76197636 | None:intergenic | 55.0% | |
| ! | CGGGAAGATGGCAGCCTTAT+TGG | + | chr3.1:76196080-76196099 | MS.gene049322:CDS | 55.0% |
| ! | TACAAGGGCTAGCAGCCGAT+TGG | + | chr3.1:76198107-76198126 | MS.gene049322:intron | 55.0% |
| ! | TACCACCCTGAAGCATCTCC+TGG | + | chr3.1:76197608-76197627 | MS.gene049322:CDS | 55.0% |
| !! | TTGCTTGGCCAGGCTTTAGG+AGG | + | chr3.1:76196867-76196886 | MS.gene049322:CDS | 55.0% |
| ACTCCTTCAGGCAGTGTGGC+AGG | - | chr3.1:76197509-76197528 | None:intergenic | 60.0% | |
| ACTGCGGCACTATAGCGCAG+CGG | + | chr3.1:76196238-76196257 | MS.gene049322:intron | 60.0% | |
| CTCCTTCAGGCAGTGTGGCA+GGG | - | chr3.1:76197508-76197527 | None:intergenic | 60.0% | |
| GGCTAGCAGCCGATTGGCAT+AGG | + | chr3.1:76198113-76198132 | MS.gene049322:CDS | 60.0% | |
| GTCCAGGAGATGCTTCAGGG+TGG | - | chr3.1:76197613-76197632 | None:intergenic | 60.0% | |
| GACCCTGCCACACTGCCTGA+AGG | + | chr3.1:76197503-76197522 | MS.gene049322:CDS | 65.0% | |
| GCGGCGCCTTGGAACCAAAG+AGG | - | chr3.1:76195085-76195104 | None:intergenic | 65.0% | |
| ! | AGAGGTGTGTGGCGGCGCCT+TGG | - | chr3.1:76195096-76195115 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 76195041 | 76198162 | 76195041 | ID=MS.gene049322 |
| chr3.1 | mRNA | 76195041 | 76198162 | 76195041 | ID=MS.gene049322.t1;Parent=MS.gene049322 |
| chr3.1 | exon | 76195041 | 76195152 | 76195041 | ID=MS.gene049322.t1.exon1;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76195041 | 76195152 | 76195041 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76195293 | 76195425 | 76195293 | ID=MS.gene049322.t1.exon2;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76195293 | 76195425 | 76195293 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76195532 | 76195620 | 76195532 | ID=MS.gene049322.t1.exon3;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76195532 | 76195620 | 76195532 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76195714 | 76195774 | 76195714 | ID=MS.gene049322.t1.exon4;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76195714 | 76195774 | 76195714 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76195884 | 76195951 | 76195884 | ID=MS.gene049322.t1.exon5;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76195884 | 76195951 | 76195884 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76196045 | 76196173 | 76196045 | ID=MS.gene049322.t1.exon6;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76196045 | 76196173 | 76196045 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76196428 | 76196537 | 76196428 | ID=MS.gene049322.t1.exon7;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76196428 | 76196537 | 76196428 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76196630 | 76196977 | 76196630 | ID=MS.gene049322.t1.exon8;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76196630 | 76196977 | 76196630 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76197485 | 76197650 | 76197485 | ID=MS.gene049322.t1.exon9;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76197485 | 76197650 | 76197485 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| chr3.1 | exon | 76198113 | 76198162 | 76198113 | ID=MS.gene049322.t1.exon10;Parent=MS.gene049322.t1 |
| chr3.1 | CDS | 76198113 | 76198162 | 76198113 | ID=cds.MS.gene049322.t1;Parent=MS.gene049322.t1 |
| Gene Sequence |
| Protein sequence |
