AlfalfaGEDB | MS.gene31421

M. sativa cultivar XinJiangDaYe / MS.gene31421

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31421.t1	XP_013465160.1	99.2	247	1	1	1	247	40	285	5.30E-140	506.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31421.t1	O49459	84.4	179	27	1	2	179	51	229	4.0e-88	325.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31421.t1	A0A072VM12	99.2	247	1	1	1	247	40	285	3.8e-140	506.9

TFs/TRs:

Gene ID	Type	Classification
MS.gene31421.t1	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049159	MS.gene31421	0.818035	2.42E-52	-1.69E-46
MS.gene049501	MS.gene31421	0.806154	9.44E-50	-1.69E-46
MS.gene050807	MS.gene31421	0.825123	5.56E-54	-1.69E-46
MS.gene051265	MS.gene31421	0.812127	4.96E-51	-1.69E-46
MS.gene051388	MS.gene31421	0.831964	1.24E-55	-1.69E-46
MS.gene051719	MS.gene31421	0.808579	2.89E-50	-1.69E-46
MS.gene052020	MS.gene31421	0.801295	9.63E-49	-1.69E-46
MS.gene052611	MS.gene31421	0.822503	2.29E-53	-1.69E-46
MS.gene052863	MS.gene31421	0.81757	3.08E-52	-1.69E-46
MS.gene053144	MS.gene31421	0.813198	2.89E-51	-1.69E-46
MS.gene054584	MS.gene31421	0.809069	2.27E-50	-1.69E-46
MS.gene054801	MS.gene31421	0.804863	1.76E-49	-1.69E-46
MS.gene055466	MS.gene31421	0.823281	1.51E-53	-1.69E-46
MS.gene055468	MS.gene31421	0.810054	1.39E-50	-1.69E-46
MS.gene055608	MS.gene31421	0.833135	6.35E-56	-1.69E-46
MS.gene055773	MS.gene31421	0.848767	4.97E-60	-1.69E-46
MS.gene055818	MS.gene31421	0.808112	3.63E-50	-1.69E-46
MS.gene058625	MS.gene31421	0.80014	1.66E-48	-1.69E-46
MS.gene059842	MS.gene31421	0.806585	7.66E-50	-1.69E-46
MS.gene059937	MS.gene31421	0.819219	1.30E-52	-1.69E-46
MS.gene060429	MS.gene31421	0.804784	1.83E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31421.t1	MTR_2g090735	99.190	247	1	1	1	247	40	285	0.0	507
MS.gene31421.t1	MTR_4g078875	77.689	251	47	4	1	247	39	284	3.63e-136	384
MS.gene31421.t1	MTR_4g088245	67.200	250	72	4	2	246	60	304	4.73e-115	332
MS.gene31421.t1	MTR_2g014680	61.753	251	89	3	2	247	45	293	2.93e-107	312
MS.gene31421.t1	MTR_8g069160	84.146	164	26	0	2	165	60	223	2.73e-100	293
MS.gene31421.t1	MTR_8g102240	77.966	177	32	2	9	178	46	222	1.68e-93	283
MS.gene31421.t1	MTR_8g102240	77.966	177	32	2	9	178	46	222	1.73e-93	283
MS.gene31421.t1	MTR_5g053430	58.659	179	73	1	4	182	52	229	4.06e-67	214
MS.gene31421.t1	MTR_5g053430	58.659	179	73	1	4	182	52	229	5.37e-67	214
MS.gene31421.t1	MTR_1g093680	59.302	172	69	1	5	176	53	223	1.45e-66	214
MS.gene31421.t1	MTR_7g033320	57.576	165	69	1	6	169	51	215	6.50e-61	199
MS.gene31421.t1	MTR_1g093670	51.163	172	69	1	5	176	18	174	9.53e-50	166
MS.gene31421.t1	MTR_4g078895	82.353	51	9	0	1	51	28	78	5.92e-24	92.0
MS.gene31421.t1	MTR_1g008740	31.841	201	106	9	10	201	13	191	7.53e-16	76.3
MS.gene31421.t1	MTR_1g008740	31.841	201	106	9	10	201	27	205	1.09e-15	75.9
MS.gene31421.t1	MTR_3g070030	32.203	177	89	8	10	176	19	174	2.07e-14	72.0
MS.gene31421.t1	MTR_7g085260	32.995	197	95	9	10	188	17	194	3.79e-14	71.6
MS.gene31421.t1	MTR_6g084430	32.934	167	89	6	9	170	4	152	4.08e-14	70.9
MS.gene31421.t1	MTR_3g109340	32.530	166	86	7	10	167	22	169	6.81e-14	70.5
MS.gene31421.t1	MTR_3g435150	31.694	183	96	7	10	181	16	180	1.58e-13	68.9
MS.gene31421.t1	MTR_7g011120	29.348	184	97	6	10	179	8	172	3.99e-13	68.2
MS.gene31421.t1	MTR_2g014700	65.116	43	15	0	75	117	44	86	5.15e-13	63.5
MS.gene31421.t1	MTR_4g108760	31.579	171	88	7	10	170	17	168	8.01e-13	67.4
MS.gene31421.t1	MTR_2g080010	30.667	150	85	5	8	154	13	146	1.37e-11	63.9
MS.gene31421.t1	MTR_1g069805	28.313	166	96	6	9	169	9	156	2.83e-11	62.4
MS.gene31421.t1	MTR_3g096920	33.562	146	75	7	10	152	7	133	5.01e-11	62.0
MS.gene31421.t1	MTR_8g094580	32.192	146	77	6	10	152	7	133	5.36e-11	61.6
MS.gene31421.t1	MTR_3g096920	33.562	146	75	7	10	152	7	133	5.78e-11	62.0
MS.gene31421.t1	MTR_3g088110	32.639	144	79	6	10	152	7	133	7.22e-11	61.2
MS.gene31421.t1	MTR_2g078700	30.952	168	89	7	10	167	23	173	7.31e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31421.t1	AT4G28500	81.622	185	33	1	2	185	51	235	5.48e-111	322
MS.gene31421.t1	AT1G28470	78.857	175	37	0	2	176	69	243	4.49e-100	294
MS.gene31421.t1	AT4G29230	76.966	178	33	1	9	178	47	224	1.94e-94	284
MS.gene31421.t1	AT4G29230	76.966	178	33	1	9	178	46	223	8.11e-94	284
MS.gene31421.t1	AT4G29230	76.966	178	33	1	9	178	47	224	8.52e-94	284
MS.gene31421.t1	AT5G56620	72.472	178	38	3	9	175	42	219	6.82e-89	269
MS.gene31421.t1	AT5G56620	72.472	178	38	3	9	175	42	219	7.32e-89	268
MS.gene31421.t1	AT5G56620	72.472	178	38	3	9	175	42	219	1.28e-88	267
MS.gene31421.t1	AT1G25580	59.064	171	63	3	4	174	52	215	1.09e-62	202
MS.gene31421.t1	AT5G14490	54.762	168	73	3	8	174	53	218	9.98e-54	175
MS.gene31421.t1	AT5G14490	54.762	168	73	3	8	174	53	218	1.54e-53	176
MS.gene31421.t1	AT5G14490	54.762	168	73	3	8	174	56	221	1.79e-53	176
MS.gene31421.t1	AT5G14490	54.762	168	73	3	8	174	56	221	2.28e-53	176
MS.gene31421.t1	AT3G01600	53.939	165	74	2	8	171	53	216	3.42e-51	171
MS.gene31421.t1	AT3G04060	32.961	179	96	6	2	172	12	174	6.42e-16	76.3
MS.gene31421.t1	AT5G18270	34.637	179	91	7	3	172	14	175	8.67e-16	75.9
MS.gene31421.t1	AT5G18270	34.637	179	91	7	3	172	14	175	1.57e-15	75.1
MS.gene31421.t1	AT3G18400	34.731	167	81	8	9	167	4	150	1.24e-14	72.4
MS.gene31421.t1	AT3G29035	32.941	170	83	8	10	168	24	173	1.37e-13	69.3
MS.gene31421.t1	AT5G07680	32.143	168	91	5	10	170	17	168	2.00e-13	68.9
MS.gene31421.t1	AT5G07680	32.143	168	91	5	10	170	3	154	2.24e-13	68.9
MS.gene31421.t1	AT5G39610	33.929	168	82	7	10	167	20	168	3.94e-13	67.8
MS.gene31421.t1	AT5G61430	31.953	169	90	6	10	170	16	167	6.20e-13	67.8
MS.gene31421.t1	AT1G01720	31.333	150	85	5	4	152	1	133	1.10e-12	66.6
MS.gene31421.t1	AT1G02230	32.877	146	73	7	11	149	4	131	1.03e-11	64.3
MS.gene31421.t1	AT5G08790	32.877	146	76	6	10	152	7	133	1.04e-11	63.9
MS.gene31421.t1	AT1G76420	31.844	179	92	9	9	177	21	179	1.30e-11	63.9
MS.gene31421.t1	AT4G35580	29.082	196	106	10	3	187	2	175	2.02e-11	63.9
MS.gene31421.t1	AT4G35580	29.082	196	106	10	3	187	2	175	2.06e-11	63.9
MS.gene31421.t1	AT4G35580	29.082	196	106	10	3	187	2	175	2.44e-11	63.5
MS.gene31421.t1	AT1G33060	28.090	178	97	9	3	169	17	174	3.77e-11	63.2
MS.gene31421.t1	AT1G33060	28.090	178	97	9	3	169	17	174	3.83e-11	63.2
MS.gene31421.t1	AT1G02220	31.690	142	77	6	11	149	4	128	6.23e-11	62.0
MS.gene31421.t1	AT5G14000	31.250	160	92	8	10	167	15	158	9.25e-11	60.1

Find 48 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACTTGCCACTCACGAAAAC+TGG	0.294833	2.4:+9699535	None:intergenic
TCAAGAGATTCTTGAACATT+TGG	0.312906	2.4:-9699967	MS.gene31421:CDS
GAAAGCCAGAGAAAACAAAT+TGG	0.314159	2.4:-9699462	MS.gene31421:CDS
CACATTGTCTAGGCTGTGTT+TGG	0.340883	2.4:+9699365	None:intergenic
AGAGGAGAAAGAAGGAGAAT+TGG	0.354646	2.4:-9699407	MS.gene31421:CDS
TTCGTGAGTGGCAAGTTAAA+AGG	0.359924	2.4:-9699529	MS.gene31421:CDS
AATTGACCTGGTAACTTCTC+TGG	0.367159	2.4:+9699849	None:intergenic
CATTATTTCCAAGATGGTAT+TGG	0.373788	2.4:+9699431	None:intergenic
TATGCAGGTGTCGGCAAAGA+TGG	0.386728	2.4:-9699682	MS.gene31421:intron
GAGTTACCTGGATTACCTGC+TGG	0.403541	2.4:-9700011	MS.gene31421:CDS
GAAACAAGATGGCATAAAAC+AGG	0.423381	2.4:-9699568	MS.gene31421:CDS
GGGATGAACTCATCAATTAA+AGG	0.427373	2.4:+9699909	None:intergenic
CCTCTTCATTATTTCCAAGA+TGG	0.434430	2.4:+9699425	None:intergenic
GAGTTCATCCCTACTCTTGA+AGG	0.437508	2.4:-9699897	MS.gene31421:CDS
CTGTGTTTGGTAGAAAACTT+TGG	0.443831	2.4:+9699378	None:intergenic
CCTACTCTTGAAGGAGAGAA+TGG	0.452976	2.4:-9699888	MS.gene31421:CDS
AGAGATTCTTGAACATTTGG+AGG	0.472757	2.4:-9699964	MS.gene31421:CDS
CCATCGAAAGCATACACAAC+AGG	0.476509	2.4:-9699634	MS.gene31421:CDS
TTCACCCCAGCAGGTAATCC+AGG	0.479471	2.4:+9700005	None:intergenic
CCATTCTCTCCTTCAAGAGT+AGG	0.481831	2.4:+9699888	None:intergenic
GGATCAAACTTCACCCCAGC+AGG	0.493343	2.4:+9699996	None:intergenic
GTTATGCACCAATACCATCT+TGG	0.493624	2.4:-9699439	MS.gene31421:CDS
TGATCCGACATTTCTTTCAC+AGG	0.494146	2.4:-9699657	MS.gene31421:CDS
CATTCTCTCCTTCAAGAGTA+GGG	0.494352	2.4:+9699889	None:intergenic
AGTTACCTGGATTACCTGCT+GGG	0.500946	2.4:-9700010	MS.gene31421:CDS
AAAGCCAGAGAAAACAAATT+GGG	0.504516	2.4:-9699461	MS.gene31421:CDS
GTTAATGAATTATAGGGTGC+TGG	0.506242	2.4:-9700041	None:intergenic
CCTGTTGTGTATGCTTTCGA+TGG	0.507588	2.4:+9699634	None:intergenic
AATAATGAAGAGGAGAAAGA+AGG	0.526318	2.4:-9699415	MS.gene31421:CDS
ATGCAGGTGTCGGCAAAGAT+GGG	0.533540	2.4:-9699681	MS.gene31421:intron
TCAAGAATCTCTTGATCAGT+AGG	0.542994	2.4:+9699975	None:intergenic
GCTGGAATTCATGAGTTACC+TGG	0.547070	2.4:-9700023	MS.gene31421:CDS
AAAGATGTACCATCATGGAC+AGG	0.570055	2.4:+9699157	None:intergenic
GAATGAAAGATGTACCATCA+TGG	0.578897	2.4:+9699152	None:intergenic
ACTCATCCAGAGAAGTTACC+AGG	0.581252	2.4:-9699855	MS.gene31421:intron
AATGAACCACCACATTGTCT+AGG	0.596526	2.4:+9699355	None:intergenic
TGTAGTTAGTGTAAAGCACA+AGG	0.598633	2.4:+9699494	None:intergenic
CAGATGGAAGTGAAACAAGA+TGG	0.608219	2.4:-9699579	MS.gene31421:CDS
ATGGCCTGTGAAAGAAATGT+CGG	0.608865	2.4:+9699653	None:intergenic
AACATTTGGAGGCAAAAGTG+AGG	0.622163	2.4:-9699953	MS.gene31421:CDS
CCATCTTGGAAATAATGAAG+AGG	0.636615	2.4:-9699425	MS.gene31421:CDS
AAAGTGCACACAGATGCAGA+TGG	0.660294	2.4:-9699595	MS.gene31421:CDS
GGCATAAAACAGGTAAAACA+AGG	0.665333	2.4:-9699558	MS.gene31421:CDS
CAAACACAGCCTAGACAATG+TGG	0.666262	2.4:-9699364	MS.gene31421:CDS
ACACAGCCTAGACAATGTGG+TGG	0.735435	2.4:-9699361	MS.gene31421:CDS
TCAAGGTGTGAATCATGAGG+TGG	0.742861	2.4:-9699287	MS.gene31421:CDS
TGATCAAGGTGTGAATCATG+AGG	0.746754	2.4:-9699290	MS.gene31421:CDS
GTTACCTGGATTACCTGCTG+GGG	0.752999	2.4:-9700009	MS.gene31421:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATATATATATATATTTGG+TGG	+	chr2.4:9699354-9699373	None:intergenic	10.0%
!!	GGCATATATATATATATATT+TGG	+	chr2.4:9699357-9699376	None:intergenic	15.0%
!!!	TTTTCTGATAAAAAACTAAA+TGG	-	chr2.4:9699860-9699879	MS.gene31421:CDS	15.0%
!!	CTATGAAAGAATAAAAGAAA+TGG	+	chr2.4:9699394-9699413	None:intergenic	20.0%
!!	GAAATGGAAAGTAAATTATA+AGG	+	chr2.4:9699378-9699397	None:intergenic	20.0%
!	AAAAAACTAAATGGTGATCA+AGG	-	chr2.4:9699869-9699888	MS.gene31421:CDS	25.0%
!	CACAAAAACTGTCATTATAT+AGG	+	chr2.4:9699446-9699465	None:intergenic	25.0%
!!	ATATTTTACGTCTAATATGC+AGG	-	chr2.4:9699476-9699495	MS.gene31421:CDS	25.0%
!!	TCTTTCATATCTTTTGATCA+AGG	-	chr2.4:9699950-9699969	MS.gene31421:CDS	25.0%
	AAAGCCAGAGAAAACAAATT+GGG	-	chr2.4:9699712-9699731	MS.gene31421:intron	30.0%
	AATAATGAAGAGGAGAAAGA+AGG	-	chr2.4:9699758-9699777	MS.gene31421:intron	30.0%
	CATTATTTCCAAGATGGTAT+TGG	+	chr2.4:9699745-9699764	None:intergenic	30.0%
	GTGGTTAATCATAAAAACAG+TGG	-	chr2.4:9699905-9699924	MS.gene31421:CDS	30.0%
	TCAAGAGATTCTTGAACATT+TGG	-	chr2.4:9699206-9699225	MS.gene31421:CDS	30.0%
!!	ATAACCCAATTTGTTTTCTC+TGG	+	chr2.4:9699719-9699738	None:intergenic	30.0%
	AGAGATTCTTGAACATTTGG+AGG	-	chr2.4:9699209-9699228	MS.gene31421:CDS	35.0%
	CCATCTTGGAAATAATGAAG+AGG	-	chr2.4:9699748-9699767	MS.gene31421:intron	35.0%
	CCTCTTCATTATTTCCAAGA+TGG	+	chr2.4:9699751-9699770	None:intergenic	35.0%
	CTGTGTTTGGTAGAAAACTT+TGG	+	chr2.4:9699798-9699817	None:intergenic	35.0%
	GAAACAAGATGGCATAAAAC+AGG	-	chr2.4:9699605-9699624	MS.gene31421:CDS	35.0%
	GAAAGCCAGAGAAAACAAAT+TGG	-	chr2.4:9699711-9699730	MS.gene31421:intron	35.0%
	GAATGAAAGATGTACCATCA+TGG	+	chr2.4:9700024-9700043	None:intergenic	35.0%
	GGCATAAAACAGGTAAAACA+AGG	-	chr2.4:9699615-9699634	MS.gene31421:CDS	35.0%
	GGGATGAACTCATCAATTAA+AGG	+	chr2.4:9699267-9699286	None:intergenic	35.0%
	TCAAGAATCTCTTGATCAGT+AGG	+	chr2.4:9699201-9699220	None:intergenic	35.0%
	TGTAGTTAGTGTAAAGCACA+AGG	+	chr2.4:9699682-9699701	None:intergenic	35.0%
	AAAGATGTACCATCATGGAC+AGG	+	chr2.4:9700019-9700038	None:intergenic	40.0%
	AACATTTGGAGGCAAAAGTG+AGG	-	chr2.4:9699220-9699239	MS.gene31421:CDS	40.0%
	AATGAACCACCACATTGTCT+AGG	+	chr2.4:9699821-9699840	None:intergenic	40.0%
	AATTGACCTGGTAACTTCTC+TGG	+	chr2.4:9699327-9699346	None:intergenic	40.0%
	AGAGGAGAAAGAAGGAGAAT+TGG	-	chr2.4:9699766-9699785	MS.gene31421:intron	40.0%
	ATGGCCTGTGAAAGAAATGT+CGG	+	chr2.4:9699523-9699542	None:intergenic	40.0%
	CAGATGGAAGTGAAACAAGA+TGG	-	chr2.4:9699594-9699613	MS.gene31421:CDS	40.0%
	CATTCTCTCCTTCAAGAGTA+GGG	+	chr2.4:9699287-9699306	None:intergenic	40.0%
	GGTACATCTTTCATTCCTTG+AGG	-	chr2.4:9700028-9700047	MS.gene31421:CDS	40.0%
	GTTATGCACCAATACCATCT+TGG	-	chr2.4:9699734-9699753	MS.gene31421:intron	40.0%
	TACGTCTAATATGCAGGTGT+CGG	-	chr2.4:9699482-9699501	MS.gene31421:CDS	40.0%
	TGATCAAGGTGTGAATCATG+AGG	-	chr2.4:9699883-9699902	MS.gene31421:CDS	40.0%
	TGATCCGACATTTCTTTCAC+AGG	-	chr2.4:9699516-9699535	MS.gene31421:CDS	40.0%
	TTCGTGAGTGGCAAGTTAAA+AGG	-	chr2.4:9699644-9699663	MS.gene31421:CDS	40.0%
!	TCTCATTTTCCTGTCCATGA+TGG	-	chr2.4:9700007-9700026	MS.gene31421:CDS	40.0%
!	TTTGGTGGCTTAAATTGACC+TGG	+	chr2.4:9699339-9699358	None:intergenic	40.0%
	AAAGTGCACACAGATGCAGA+TGG	-	chr2.4:9699578-9699597	MS.gene31421:CDS	45.0%
	AACTTGCCACTCACGAAAAC+TGG	+	chr2.4:9699641-9699660	None:intergenic	45.0%
	ACTCATCCAGAGAAGTTACC+AGG	-	chr2.4:9699318-9699337	MS.gene31421:CDS	45.0%
	AGTTACCTGGATTACCTGCT+GGG	-	chr2.4:9699163-9699182	MS.gene31421:CDS	45.0%
	CAAACACAGCCTAGACAATG+TGG	-	chr2.4:9699809-9699828	MS.gene31421:intron	45.0%
	CACATTGTCTAGGCTGTGTT+TGG	+	chr2.4:9699811-9699830	None:intergenic	45.0%
	CCATTCTCTCCTTCAAGAGT+AGG	+	chr2.4:9699288-9699307	None:intergenic	45.0%
	CCTACTCTTGAAGGAGAGAA+TGG	-	chr2.4:9699285-9699304	MS.gene31421:CDS	45.0%
	CCTGTTGTGTATGCTTTCGA+TGG	+	chr2.4:9699542-9699561	None:intergenic	45.0%
	GAGTTCATCCCTACTCTTGA+AGG	-	chr2.4:9699276-9699295	MS.gene31421:CDS	45.0%
	GCTGGAATTCATGAGTTACC+TGG	-	chr2.4:9699150-9699169	MS.gene31421:CDS	45.0%
	TCAAGGTGTGAATCATGAGG+TGG	-	chr2.4:9699886-9699905	MS.gene31421:CDS	45.0%
!	CCATCGAAAGCATACACAAC+AGG	-	chr2.4:9699539-9699558	MS.gene31421:CDS	45.0%
	ACACAGCCTAGACAATGTGG+TGG	-	chr2.4:9699812-9699831	MS.gene31421:intron	50.0%
	GAGTTACCTGGATTACCTGC+TGG	-	chr2.4:9699162-9699181	MS.gene31421:CDS	50.0%
	GTTACCTGGATTACCTGCTG+GGG	-	chr2.4:9699164-9699183	MS.gene31421:CDS	50.0%
!	ACAAGGCCAGTTTTCGTGAG+TGG	-	chr2.4:9699632-9699651	MS.gene31421:CDS	50.0%
!!	ATGCAGGTGTCGGCAAAGAT+GGG	-	chr2.4:9699492-9699511	MS.gene31421:CDS	50.0%
!!	TATGCAGGTGTCGGCAAAGA+TGG	-	chr2.4:9699491-9699510	MS.gene31421:CDS	50.0%
	GGATCAAACTTCACCCCAGC+AGG	+	chr2.4:9699180-9699199	None:intergenic	55.0%
	TTCACCCCAGCAGGTAATCC+AGG	+	chr2.4:9699171-9699190	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	9699147	9700048	9699147	ID=MS.gene31421
chr2.4	mRNA	9699147	9700048	9699147	ID=MS.gene31421.t1;Parent=MS.gene31421
chr2.4	exon	9699856	9700048	9699856	ID=MS.gene31421.t1.exon1;Parent=MS.gene31421.t1
chr2.4	CDS	9699856	9700048	9699856	ID=cds.MS.gene31421.t1;Parent=MS.gene31421.t1
chr2.4	exon	9699147	9699697	9699147	ID=MS.gene31421.t1.exon2;Parent=MS.gene31421.t1
chr2.4	CDS	9699147	9699697	9699147	ID=cds.MS.gene31421.t1;Parent=MS.gene31421.t1

Gene Sequence

>MS.gene31421

GGTGCTGGAATTCATGAGTTACCTGGATTACCTGCTGGGGTGAAGTTTGATCCTACTGATCAAGAGATTCTTGAACATTTGGAGGCAAAAGTGAGGTCTGATATTCAAATGCTTCATCCTTTAATTGATGAGTTCATCCCTACTCTTGAAGGAGAGAATGGAATCTGCTGTACTCATCCAGAGAAGTTACCAGGTCAATTTAAGCCACCAAATATATATATATATATGCCTTATAATTTACTTTCCATTTCTTTTATTCTTTCATAGTTTCTAATAAAAAAAGTCTCATCTTATATCCTATATAATGACAGTTTTTGTGTGTTAATTTAATATTTTACGTCTAATATGCAGGTGTCGGCAAAGATGGGTTGATCCGACATTTCTTTCACAGGCCATCGAAAGCATACACAACAGGAACGAGAAAAAGAAGAAAAGTGCACACAGATGCAGATGGAAGTGAAACAAGATGGCATAAAACAGGTAAAACAAGGCCAGTTTTCGTGAGTGGCAAGTTAAAAGGCTATAAGAAAATCCTTGTGCTTTACACTAACTACAGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTTATGCACCAATACCATCTTGGAAATAATGAAGAGGAGAAAGAAGGAGAATTGGTAGTTTCCAAAGTTTTCTACCAAACACAGCCTAGACAATGTGGTGGTTCATTGATGAAAGACTCAGCATCATTTTCTGATAAAAAACTAAATGGTGATCAAGGTGTGAATCATGAGGTGGTTAATCATAAAAACAGTGGATTTGTTGAATACTATAGTACTTCTTTCATATCTTTTGATCAAGGTGAACAACATAGATCAAACAATGCTCAAGTGATTTCTCATTTTCCTGTCCATGATGGTACATCTTTCATTCCTTGA

Protein sequence

>MS.gene31421.t1

GAGIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQMLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVFVSGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGGSLMKDSASFSDKKLNGDQGVNHEVVNHKNSGFVEYYSTSFISFDQGEQHRSNNAQVISHFPVHDGTSFIP