Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31722.t1 | XP_013466243.1 | 63.3 | 760 | 68 | 3 | 1 | 760 | 1 | 549 | 4.30E-122 | 449.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31722.t1 | A0A072VQ79 | 63.3 | 760 | 68 | 3 | 1 | 760 | 1 | 549 | 3.1e-122 | 449.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene31722 | 0.831297 | 1.81E-55 | -1.69E-46 |
MS.gene049350 | MS.gene31722 | 0.828535 | 8.52E-55 | -1.69E-46 |
MS.gene051719 | MS.gene31722 | 0.825867 | 3.71E-54 | -1.69E-46 |
MS.gene051720 | MS.gene31722 | 0.818541 | 1.86E-52 | -1.69E-46 |
MS.gene052463 | MS.gene31722 | 0.807077 | 6.03E-50 | -1.69E-46 |
MS.gene053144 | MS.gene31722 | 0.809468 | 1.86E-50 | -1.69E-46 |
MS.gene053226 | MS.gene31722 | 0.815928 | 7.19E-52 | -1.69E-46 |
MS.gene05364 | MS.gene31722 | 0.800991 | 1.11E-48 | -1.69E-46 |
MS.gene05458 | MS.gene31722 | 0.804023 | 2.64E-49 | -1.69E-46 |
MS.gene055465 | MS.gene31722 | 0.825809 | 3.83E-54 | -1.69E-46 |
MS.gene055466 | MS.gene31722 | 0.812063 | 5.12E-51 | -1.69E-46 |
MS.gene055468 | MS.gene31722 | 0.809653 | 1.70E-50 | -1.69E-46 |
MS.gene055513 | MS.gene31722 | 0.833961 | 3.95E-56 | -1.69E-46 |
MS.gene055537 | MS.gene31722 | 0.800087 | 1.70E-48 | -1.69E-46 |
MS.gene057294 | MS.gene31722 | 0.815943 | 7.13E-52 | -1.69E-46 |
MS.gene058625 | MS.gene31722 | 0.821093 | 4.85E-53 | -1.69E-46 |
MS.gene058668 | MS.gene31722 | 0.80242 | 5.66E-49 | -1.69E-46 |
MS.gene059625 | MS.gene31722 | 0.812878 | 3.40E-51 | -1.69E-46 |
MS.gene060519 | MS.gene31722 | 0.807122 | 5.90E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31722.t1 | MTR_1g026790 | 87.602 | 492 | 58 | 3 | 270 | 760 | 60 | 549 | 0.0 | 814 |
MS.gene31722.t1 | MTR_1g026790 | 50.943 | 424 | 157 | 12 | 1 | 405 | 1 | 392 | 8.19e-76 | 263 |
MS.gene31722.t1 | MTR_1g026790 | 47.561 | 246 | 93 | 3 | 1142 | 1364 | 294 | 526 | 1.46e-58 | 213 |
MS.gene31722.t1 | MTR_1g026790 | 82.627 | 472 | 65 | 5 | 270 | 740 | 60 | 515 | 0.0 | 709 |
MS.gene31722.t1 | MTR_1g026790 | 75.000 | 216 | 49 | 3 | 1 | 215 | 1 | 212 | 1.03e-75 | 261 |
MS.gene31722.t1 | MTR_1g026790 | 43.496 | 246 | 94 | 4 | 1142 | 1362 | 294 | 519 | 3.84e-48 | 181 |
MS.gene31722.t1 | MTR_2g010820 | 51.543 | 551 | 176 | 15 | 227 | 760 | 61 | 537 | 2.90e-142 | 446 |
MS.gene31722.t1 | MTR_2g010820 | 51.869 | 214 | 87 | 4 | 1156 | 1364 | 312 | 514 | 8.63e-52 | 192 |
MS.gene31722.t1 | MTR_2g010820 | 33.000 | 400 | 212 | 13 | 1 | 386 | 1 | 358 | 8.13e-16 | 82.8 |
MS.gene31722.t1 | MTR_1g026800 | 91.928 | 223 | 18 | 0 | 1142 | 1364 | 235 | 457 | 3.87e-138 | 432 |
MS.gene31722.t1 | MTR_1g026800 | 46.825 | 378 | 156 | 10 | 410 | 760 | 121 | 480 | 3.82e-83 | 281 |
MS.gene31722.t1 | MTR_1g026800 | 91.111 | 135 | 12 | 0 | 761 | 895 | 182 | 316 | 7.03e-71 | 246 |
MS.gene31722.t1 | MTR_1g026800 | 89.024 | 82 | 9 | 0 | 1060 | 1141 | 235 | 316 | 3.69e-35 | 141 |
MS.gene31722.t1 | MTR_1g026800 | 85.366 | 82 | 12 | 0 | 1019 | 1100 | 235 | 316 | 2.24e-32 | 133 |
MS.gene31722.t1 | MTR_1g026800 | 84.146 | 82 | 13 | 0 | 937 | 1018 | 235 | 316 | 6.01e-32 | 132 |
MS.gene31722.t1 | MTR_1g026800 | 84.146 | 82 | 13 | 0 | 978 | 1059 | 235 | 316 | 1.04e-31 | 131 |
MS.gene31722.t1 | MTR_1g026800 | 47.191 | 89 | 38 | 1 | 1 | 89 | 1 | 80 | 2.32e-12 | 71.6 |
MS.gene31722.t1 | MTR_1g026800 | 32.919 | 161 | 81 | 4 | 6 | 151 | 66 | 214 | 2.67e-11 | 68.2 |
MS.gene31722.t1 | MTR_1g026810 | 43.496 | 492 | 191 | 12 | 311 | 760 | 47 | 493 | 1.16e-101 | 334 |
MS.gene31722.t1 | MTR_1g026810 | 58.730 | 252 | 74 | 3 | 1142 | 1364 | 220 | 470 | 1.34e-82 | 280 |
MS.gene31722.t1 | MTR_1g026810 | 48.485 | 165 | 55 | 3 | 761 | 895 | 166 | 330 | 8.40e-29 | 122 |
MS.gene31722.t1 | MTR_1g026810 | 31.466 | 232 | 124 | 6 | 23 | 247 | 8 | 211 | 1.45e-12 | 72.4 |
MS.gene31722.t1 | MTR_1g026810 | 43.220 | 472 | 180 | 14 | 311 | 740 | 47 | 472 | 2.22e-89 | 299 |
MS.gene31722.t1 | MTR_1g026810 | 58.893 | 253 | 74 | 3 | 1142 | 1365 | 220 | 471 | 7.93e-84 | 283 |
MS.gene31722.t1 | MTR_1g026810 | 48.485 | 165 | 55 | 3 | 761 | 895 | 166 | 330 | 6.80e-29 | 122 |
MS.gene31722.t1 | MTR_1g026810 | 31.466 | 232 | 124 | 6 | 23 | 247 | 8 | 211 | 8.45e-13 | 72.8 |
MS.gene31722.t1 | MTR_1g026810 | 58.893 | 253 | 74 | 3 | 1142 | 1365 | 124 | 375 | 1.51e-84 | 282 |
MS.gene31722.t1 | MTR_1g026810 | 45.178 | 394 | 156 | 12 | 386 | 740 | 4 | 376 | 2.97e-82 | 275 |
MS.gene31722.t1 | MTR_1g026810 | 48.485 | 165 | 55 | 3 | 761 | 895 | 70 | 234 | 1.94e-29 | 122 |
MS.gene31722.t1 | MTR_1g026760 | 39.568 | 139 | 74 | 2 | 10 | 148 | 30 | 158 | 1.33e-18 | 85.9 |
MS.gene31722.t1 | MTR_1g026760 | 44.660 | 103 | 51 | 2 | 394 | 496 | 83 | 179 | 4.11e-13 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31722.t1 | AT1G21560 | 36.478 | 159 | 88 | 5 | 603 | 756 | 172 | 322 | 6.20e-18 | 87.0 |
MS.gene31722.t1 | AT1G21560 | 36.478 | 159 | 88 | 5 | 603 | 756 | 246 | 396 | 6.27e-18 | 88.2 |
MS.gene31722.t1 | AT1G21560 | 36.478 | 159 | 88 | 5 | 603 | 756 | 246 | 396 | 6.27e-18 | 88.2 |
MS.gene31722.t1 | AT1G21560 | 36.478 | 159 | 88 | 5 | 603 | 756 | 246 | 396 | 6.27e-18 | 88.2 |
MS.gene31722.t1 | AT1G21560 | 36.478 | 159 | 88 | 5 | 603 | 756 | 246 | 396 | 6.27e-18 | 88.2 |
MS.gene31722.t1 | AT4G01170 | 35.625 | 160 | 88 | 4 | 595 | 748 | 286 | 436 | 5.84e-15 | 79.7 |
MS.gene31722.t1 | AT3G07730 | 37.956 | 137 | 69 | 4 | 617 | 748 | 340 | 465 | 1.29e-12 | 72.4 |
MS.gene31722.t1 | AT3G07730 | 36.420 | 162 | 83 | 6 | 595 | 748 | 248 | 397 | 1.29e-12 | 72.0 |
Find 286 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATTCAGATCTGATTATTT+TGG | 0.105418 | 1.1:+12900019 | MS.gene31722:CDS |
GAAGGGACTTATACTCTTTC+TGG | 0.148518 | 1.1:-12907967 | None:intergenic |
CTTATGATGATTCTCAATTT+AGG | 0.202259 | 1.1:+12907909 | MS.gene31722:CDS |
AGCTATTTGCATGTTGTCTT+TGG | 0.216465 | 1.1:-12907885 | None:intergenic |
GCCATTTGCTTGTTGTCTTC+GGG | 0.236961 | 1.1:-12900277 | None:intergenic |
TCAATTTAGGAGAAGACTTT+TGG | 0.247487 | 1.1:+12907922 | MS.gene31722:CDS |
CTTATGATCTTTCTGAATTC+CGG | 0.264192 | 1.1:+12900302 | MS.gene31722:CDS |
GCTATTTGCATGTTGTCTTT+GGG | 0.265774 | 1.1:-12907884 | None:intergenic |
AAAGGGTTAGCTTCACAAAT+TGG | 0.273426 | 1.1:-12907656 | None:intergenic |
TGAATTCCGGAGAAGACTTA+TGG | 0.279084 | 1.1:+12900315 | MS.gene31722:CDS |
GCTTTGTGTGTTTAGTGTTT+TGG | 0.285613 | 1.1:+12907848 | MS.gene31722:intron |
AGCCATTTGCTTGTTGTCTT+CGG | 0.295335 | 1.1:-12900278 | None:intergenic |
GATGAAACGGATGAAGATTA+TGG | 0.295908 | 1.1:+12899366 | MS.gene31722:CDS |
GAACAATCAGTTAGAATATC+AGG | 0.300054 | 1.1:-12899534 | None:intergenic |
CGGTGAAGATCATGATAAAA+TGG | 0.301409 | 1.1:+12898483 | MS.gene31722:CDS |
CAACAATCGTCACAGAATTA+AGG | 0.303721 | 1.1:-12899923 | None:intergenic |
GATGAAACGGATGAAGATTA+TGG | 0.317477 | 1.1:+12899243 | MS.gene31722:CDS |
CGGTGAAGATGGTGATAAAA+TGG | 0.321864 | 1.1:+12898606 | MS.gene31722:CDS |
AGGATCATGTGTAGCCAAAA+AGG | 0.325786 | 1.1:-12899514 | None:intergenic |
TGATCACAGATTGGTTAATC+TGG | 0.329585 | 1.1:+12906356 | MS.gene31722:CDS |
GGATGAAGATCATGGAAATA+TGG | 0.335656 | 1.1:+12898504 | MS.gene31722:CDS |
GGATGAAGATCATGGAAATA+TGG | 0.335656 | 1.1:+12898627 | MS.gene31722:CDS |
GAAGCTCATCATACTCTTCT+TGG | 0.345982 | 1.1:-12900360 | None:intergenic |
TGTCACATAGTTCGATTAGA+AGG | 0.348397 | 1.1:-12907985 | None:intergenic |
GTACTTCAAACTATCATTCA+TGG | 0.350129 | 1.1:-12898329 | None:intergenic |
GGCTGAAGATCATGGAAATA+TGG | 0.351474 | 1.1:+12898876 | MS.gene31722:CDS |
GGCTGAAGATCATGGAAATA+TGG | 0.351474 | 1.1:+12899002 | MS.gene31722:CDS |
CTGCATCACAATCTATTATA+TGG | 0.371350 | 1.1:-12898426 | None:intergenic |
GGATGAAGATCATGGAAATA+TGG | 0.375392 | 1.1:+12898750 | MS.gene31722:CDS |
TCAACCTCAAACTGCACTTC+AGG | 0.378866 | 1.1:-12899882 | None:intergenic |
TTATACTCTTTCTGGTCATA+AGG | 0.379944 | 1.1:-12907959 | None:intergenic |
GGATGAAGGTCATGGAAATA+TGG | 0.383504 | 1.1:+12899128 | MS.gene31722:CDS |
TCATACTCTTCTTGGTCATA+AGG | 0.383556 | 1.1:-12900352 | None:intergenic |
TTGCAAGAGATTTAATGAAC+TGG | 0.389403 | 1.1:+12909158 | MS.gene31722:CDS |
AAAAGTTATTGCCGAGTTCA+AGG | 0.403934 | 1.1:+12901206 | MS.gene31722:CDS |
CTCCACCTTGGATGTGTTTG+TGG | 0.409533 | 1.1:-12906601 | None:intergenic |
CTCCACCTTGGATGTGTTTG+TGG | 0.409663 | 1.1:-12907585 | None:intergenic |
CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.1:-12906478 | None:intergenic |
CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.1:-12906724 | None:intergenic |
CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.1:-12906847 | None:intergenic |
CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.1:-12907093 | None:intergenic |
CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.1:-12907216 | None:intergenic |
CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.1:-12907462 | None:intergenic |
AGGATCATATCGAGGCAAAA+AGG | 0.412630 | 1.1:-12906298 | None:intergenic |
ACAAATTCCTGATCGGAAAC+TGG | 0.412975 | 1.1:-12899855 | None:intergenic |
AGCAATGTTTGACAATTCCT+TGG | 0.416312 | 1.1:+12909120 | MS.gene31722:CDS |
AGTGCAAATACCGGTGAATA+TGG | 0.420963 | 1.1:+12898970 | MS.gene31722:CDS |
TCTTGGGAAGGTTTCAGCCT+TGG | 0.425003 | 1.1:+12901516 | MS.gene31722:CDS |
CACATCCAAGGTGGAGGATG+GGG | 0.426751 | 1.1:+12907592 | MS.gene31722:CDS |
TTGCAGAAAGTGAGCCTCTT+GGG | 0.430812 | 1.1:+12901500 | MS.gene31722:intron |
GATGAATCATATATATTTGA+AGG | 0.433710 | 1.1:-12907683 | None:intergenic |
CTAGTTCCTGTGACGATTGT+TGG | 0.436374 | 1.1:+12907161 | MS.gene31722:CDS |
GTTCCTGTGACGATTGTTGA+TGG | 0.442668 | 1.1:+12907533 | MS.gene31722:CDS |
GATTTCAAAACAGTTACATC+TGG | 0.444085 | 1.1:-12907629 | None:intergenic |
CGCAGTCGTCTTTGTAGCAC+TGG | 0.444656 | 1.1:-12898362 | None:intergenic |
GATAAAATGGATGAAGATCA+TGG | 0.447219 | 1.1:+12898496 | MS.gene31722:CDS |
GTGCTCCTTAGCAATAGCTT+TGG | 0.447833 | 1.1:-12908868 | None:intergenic |
TTATAAAATTATTGCTTCAA+AGG | 0.456040 | 1.1:-12909187 | None:intergenic |
CACATCCAAGGTGGAGGGTA+GGG | 0.460870 | 1.1:+12906731 | MS.gene31722:CDS |
ACATATAATCCTGATGATAG+TGG | 0.462841 | 1.1:+12899636 | MS.gene31722:CDS |
AAATTCACCAGTTTCCGATC+AGG | 0.463786 | 1.1:+12899848 | MS.gene31722:CDS |
TGCGATGACTTGTGGAAATA+CGG | 0.463974 | 1.1:+12898381 | MS.gene31722:CDS |
GCTTTAGTCAAGGTTGAACT+TGG | 0.464852 | 1.1:+12898220 | MS.gene31722:CDS |
TACTCCTGAAGTGCAGTTTG+AGG | 0.466741 | 1.1:+12899878 | MS.gene31722:CDS |
CACATCCAAGGTGGAGGGTA+GGG | 0.467862 | 1.1:+12906977 | MS.gene31722:CDS |
CACATCCAAGGTGGAGGGTA+GGG | 0.467862 | 1.1:+12907346 | MS.gene31722:CDS |
AACACTGGCAGGGAGGATAT+AGG | 0.472562 | 1.1:+12899717 | MS.gene31722:CDS |
CTGCATCATCATCTATAGTC+TGG | 0.474498 | 1.1:-12899296 | None:intergenic |
CTGCATCATCATCTATAGTC+TGG | 0.474498 | 1.1:-12899419 | None:intergenic |
GGATGAAGATTATGGAAATA+CGG | 0.474975 | 1.1:+12899251 | MS.gene31722:CDS |
GGATGAAGATTATGGAAATA+CGG | 0.474975 | 1.1:+12899374 | MS.gene31722:CDS |
CTATTTGCATGTTGTCTTTG+GGG | 0.475255 | 1.1:-12907883 | None:intergenic |
ACACATCCAAGGTGGAGGAT+GGG | 0.479380 | 1.1:+12907591 | MS.gene31722:CDS |
CTCCACCTTGGATGTGTTCG+TGG | 0.481844 | 1.1:-12906970 | None:intergenic |
CTCCACCTTGGATGTGTTCG+TGG | 0.481844 | 1.1:-12907339 | None:intergenic |
AATCACAGTGGAGGTTCAAA+TGG | 0.485172 | 1.1:+12899561 | MS.gene31722:CDS |
GATGAAGATGATCAGTTACT+TGG | 0.491011 | 1.1:+12899804 | MS.gene31722:CDS |
TAAGATCAGAAAGGCGGTGG+AGG | 0.492578 | 1.1:+12898296 | MS.gene31722:CDS |
GTCAAAGCATATCACTCTAA+AGG | 0.492726 | 1.1:+12900442 | MS.gene31722:CDS |
CAACAGTGGCAGTGATGAAA+CGG | 0.492885 | 1.1:+12899587 | MS.gene31722:CDS |
CGGTGAAGATGGTGATGAAA+TGG | 0.493323 | 1.1:+12898855 | MS.gene31722:CDS |
TGATCAGAAACAGATTGATT+CGG | 0.495282 | 1.1:-12899759 | None:intergenic |
ATTAAATCTCTTGCAATCGC+AGG | 0.497988 | 1.1:-12909151 | None:intergenic |
GATAAAATGGATGAAGATCA+TGG | 0.499421 | 1.1:+12898619 | MS.gene31722:CDS |
CTCCACATTGGATGTGTTGG+TGG | 0.499568 | 1.1:-12899979 | None:intergenic |
ATCCTCCACATTGGATGTGT+TGG | 0.499641 | 1.1:-12899982 | None:intergenic |
CGGTGAATATGGTGATGAAA+TGG | 0.499799 | 1.1:+12898981 | MS.gene31722:CDS |
CCCCGAAGACAACAAGCAAA+TGG | 0.503400 | 1.1:+12900276 | MS.gene31722:CDS |
GACATTCCATAAGTCTTCTC+CGG | 0.503888 | 1.1:-12900321 | None:intergenic |
CGGTGAAGATGGTGATGTAA+TGG | 0.506705 | 1.1:+12898729 | MS.gene31722:CDS |
AACAATTTGAGTGCAAATAC+CGG | 0.508490 | 1.1:+12898586 | MS.gene31722:CDS |
CAATCAGTTCCACTATCATC+AGG | 0.510104 | 1.1:-12899645 | None:intergenic |
AACACATCCAAGGTGGAGGA+TGG | 0.510664 | 1.1:+12907590 | MS.gene31722:CDS |
GATTGTGATGCAACAGATGA+AGG | 0.513722 | 1.1:+12898931 | MS.gene31722:CDS |
CGGTGAAGATGATGATGAAA+TGG | 0.514254 | 1.1:+12899107 | MS.gene31722:CDS |
GACGATTGTTGGTGGTGATA+AGG | 0.514683 | 1.1:+12907172 | MS.gene31722:CDS |
CATTTCATCATCATCTTCAC+CGG | 0.515751 | 1.1:-12899106 | None:intergenic |
TGCAAGAGATTTAATGAACT+GGG | 0.516553 | 1.1:+12909159 | MS.gene31722:CDS |
TTTGCAGAAAGTGAGCCTCT+TGG | 0.518174 | 1.1:+12901499 | MS.gene31722:intron |
CGAGTTCAAGGAAAAGCATA+CGG | 0.520599 | 1.1:+12901218 | MS.gene31722:CDS |
GATTGTGATGCAGCAGATGA+AGG | 0.521119 | 1.1:+12898805 | MS.gene31722:CDS |
GACTGTGATGCAGCAGATGA+AGG | 0.523502 | 1.1:+12899057 | MS.gene31722:CDS |
GATGAAATGGCTGAAGATCA+TGG | 0.527509 | 1.1:+12898868 | MS.gene31722:CDS |
GATGAAATGGCTGAAGATCA+TGG | 0.527509 | 1.1:+12898994 | MS.gene31722:CDS |
ACTATCATCAGGATTATATG+TGG | 0.528339 | 1.1:-12899634 | None:intergenic |
GACGATTGTTGATGATGATA+AGG | 0.530025 | 1.1:+12899935 | MS.gene31722:CDS |
ACTTTGACAACAACACTGGC+AGG | 0.531672 | 1.1:+12899706 | MS.gene31722:CDS |
TATATATTTGAAGGAACGAA+AGG | 0.532917 | 1.1:-12907674 | None:intergenic |
GATCACAGATTGGTTAATCT+GGG | 0.534584 | 1.1:+12906357 | MS.gene31722:CDS |
AGTGTTGTTGTCAAAGTTGA+CGG | 0.534906 | 1.1:-12899700 | None:intergenic |
GACGATTGTTGACGGTGATA+AGG | 0.535998 | 1.1:+12906557 | MS.gene31722:CDS |
GACGATTGTTGACGGTGATA+AGG | 0.535998 | 1.1:+12907295 | MS.gene31722:CDS |
GACGATTGTTGACGGTGATA+AGG | 0.535998 | 1.1:+12907418 | MS.gene31722:CDS |
GCCAATACGAAACATGGAAG+GGG | 0.536320 | 1.1:+12908023 | MS.gene31722:CDS |
CATTTCATCACCATCTTCAC+CGG | 0.536895 | 1.1:-12898854 | None:intergenic |
CATTACATCACCATCTTCAC+CGG | 0.538064 | 1.1:-12898728 | None:intergenic |
ATCATTCTTATCAATTAAAG+CGG | 0.538328 | 1.1:-12898527 | None:intergenic |
CGGTGAAGACGATGATGAAA+CGG | 0.539987 | 1.1:+12899353 | MS.gene31722:CDS |
CGGTGAAGACGATGATGAAA+CGG | 0.539987 | 1.1:+12899476 | MS.gene31722:CDS |
GTCACATAGTTCGATTAGAA+GGG | 0.541022 | 1.1:-12907984 | None:intergenic |
CCATTTGCTTGTTGTCTTCG+GGG | 0.542181 | 1.1:-12900276 | None:intergenic |
CATTTCATCACCATATTCAC+CGG | 0.542184 | 1.1:-12898980 | None:intergenic |
GATGTAATGGATGAAGATCA+TGG | 0.542390 | 1.1:+12898742 | MS.gene31722:CDS |
CAAAACAGTTACATCTGGAT+CGG | 0.549149 | 1.1:-12907624 | None:intergenic |
GTTCCTGTGACGATTGTTGA+CGG | 0.551067 | 1.1:+12906549 | MS.gene31722:CDS |
GTTCCTGTGACGATTGTTGA+CGG | 0.551067 | 1.1:+12907287 | MS.gene31722:CDS |
GTTCCTGTGACGATTGTTGA+CGG | 0.551067 | 1.1:+12907410 | MS.gene31722:CDS |
GCCATCTAGAAACACGGCGG+GGG | 0.552053 | 1.1:+12900416 | MS.gene31722:CDS |
GACGATTGTTGATGGTGATA+AGG | 0.554038 | 1.1:+12907541 | MS.gene31722:CDS |
ATTATTCTCATCCTCCACAT+TGG | 0.554354 | 1.1:-12899991 | None:intergenic |
GATGATTGTTGACGGTGATA+AGG | 0.554365 | 1.1:+12906680 | MS.gene31722:CDS |
GATGATTGTTGACGGTGATA+AGG | 0.554365 | 1.1:+12906926 | MS.gene31722:CDS |
ACGCCATCTAGAAACACGGC+GGG | 0.558060 | 1.1:+12900414 | MS.gene31722:CDS |
CGTTTCATCATCGTCTTCAC+CGG | 0.559411 | 1.1:-12899352 | None:intergenic |
CGTTTCATCATCGTCTTCAC+CGG | 0.559411 | 1.1:-12899475 | None:intergenic |
AAGACGACTGCGATGACTTG+TGG | 0.560330 | 1.1:+12898373 | MS.gene31722:CDS |
CCAGGGTACAATACATGATA+CGG | 0.560803 | 1.1:-12908082 | None:intergenic |
AACAATTTGAGTGCAAATGC+CGG | 0.561450 | 1.1:+12899087 | MS.gene31722:CDS |
AACAATTTGAGTGCAAATAC+CGG | 0.562126 | 1.1:+12898835 | MS.gene31722:CDS |
AACAATTTGAGTGCAAATAC+CGG | 0.562126 | 1.1:+12898961 | MS.gene31722:CDS |
TGACTCCCTACCCTCCACCT+TGG | 0.563932 | 1.1:-12906736 | None:intergenic |
TGACTCCCTACCCTCCACCT+TGG | 0.563932 | 1.1:-12906982 | None:intergenic |
TGACTCCCTACCCTCCACCT+TGG | 0.563932 | 1.1:-12907351 | None:intergenic |
CACGAACACATCCAAGGTGG+AGG | 0.564556 | 1.1:+12906971 | MS.gene31722:CDS |
CACGAACACATCCAAGGTGG+AGG | 0.564556 | 1.1:+12907340 | MS.gene31722:CDS |
GTTCCTGTGATGATTGTTGA+CGG | 0.565416 | 1.1:+12906672 | MS.gene31722:CDS |
GTTCCTGTGATGATTGTTGA+CGG | 0.565416 | 1.1:+12906918 | MS.gene31722:CDS |
AACACTTTGAGTGCAAATAC+CGG | 0.570728 | 1.1:+12898709 | MS.gene31722:CDS |
GAGTACATATACTGGTGAAG+AGG | 0.571947 | 1.1:+12899218 | MS.gene31722:CDS |
GATCATATTAGTGATGGTGT+TGG | 0.572417 | 1.1:+12899777 | MS.gene31722:CDS |
ATCATTCTTATCAAGTAAAG+CGG | 0.572951 | 1.1:-12898650 | None:intergenic |
GAATAAGATCAGAAAGGCGG+TGG | 0.574716 | 1.1:+12898293 | MS.gene31722:CDS |
ACACATCCAAGGTGGAGGGT+AGG | 0.574729 | 1.1:+12906730 | MS.gene31722:CDS |
TTAAATCTCTTGCAATCGCA+GGG | 0.575064 | 1.1:-12909150 | None:intergenic |
CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.1:+12906479 | MS.gene31722:CDS |
CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.1:+12906602 | MS.gene31722:CDS |
CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.1:+12906725 | MS.gene31722:CDS |
CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.1:+12906848 | MS.gene31722:CDS |
CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.1:+12907094 | MS.gene31722:CDS |
CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.1:+12907217 | MS.gene31722:CDS |
CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.1:+12907463 | MS.gene31722:CDS |
ATATATTTGAAGGAACGAAA+GGG | 0.577953 | 1.1:-12907673 | None:intergenic |
CGAATCACTACCCTCCACCT+TGG | 0.580349 | 1.1:-12906490 | None:intergenic |
GACGATTGTTGATCGTGATA+AGG | 0.581436 | 1.1:+12906434 | MS.gene31722:CDS |
ACACATCCAAGGTGGAGGGT+AGG | 0.581454 | 1.1:+12906976 | MS.gene31722:CDS |
ACACATCCAAGGTGGAGGGT+AGG | 0.581454 | 1.1:+12907345 | MS.gene31722:CDS |
AACAGTTACATCTGGATCGG+AGG | 0.584068 | 1.1:-12907621 | None:intergenic |
GATGAAATGGATGAAGGTCA+TGG | 0.585483 | 1.1:+12899120 | MS.gene31722:CDS |
AAATGAAGATGATCACAGAT+TGG | 0.585753 | 1.1:+12906347 | MS.gene31722:CDS |
GATGATGATGAAATGGATGA+AGG | 0.585846 | 1.1:+12899114 | MS.gene31722:CDS |
GACGATTGTTGACTGTGATA+AGG | 0.585984 | 1.1:+12907049 | MS.gene31722:CDS |
TATCAATGACAATCATCAAG+TGG | 0.587633 | 1.1:+12906260 | MS.gene31722:CDS |
AAGGCGGTGGAGGAGACGAG+AGG | 0.589455 | 1.1:+12898306 | MS.gene31722:CDS |
GTTCCTGTGACGATTGTTGG+TGG | 0.590736 | 1.1:+12907164 | MS.gene31722:CDS |
TCTATCCAAAGCTATTGCTA+AGG | 0.590759 | 1.1:+12908863 | MS.gene31722:CDS |
GTTTCTGATCATATTAGTGA+TGG | 0.590798 | 1.1:+12899771 | MS.gene31722:CDS |
TGGTGAAGAGGTTGATGAAA+CGG | 0.591030 | 1.1:+12899230 | MS.gene31722:CDS |
CCATCTAGAAACACGGCGGG+GGG | 0.593021 | 1.1:+12900417 | MS.gene31722:CDS |
AGGAGTAACAAATTCCTGAT+CGG | 0.594614 | 1.1:-12899862 | None:intergenic |
AATCGCAGGGTTCAAATCCA+AGG | 0.595614 | 1.1:-12909137 | None:intergenic |
ACAGTTACATCTGGATCGGA+GGG | 0.595932 | 1.1:-12907620 | None:intergenic |
ACGCCAATACGAAACATGGA+AGG | 0.596682 | 1.1:+12908021 | MS.gene31722:CDS |
AGAAAGTGAGCCTCTTGGGA+AGG | 0.597307 | 1.1:+12901504 | MS.gene31722:intron |
TGGAACGCCAATACGAAACA+TGG | 0.598072 | 1.1:+12908017 | MS.gene31722:CDS |
AGTGCAAATACCGGTGAAGA+TGG | 0.598678 | 1.1:+12898595 | MS.gene31722:CDS |
AGTGCAAATACCGGTGAAGA+TGG | 0.598678 | 1.1:+12898718 | MS.gene31722:CDS |
AGTGCAAATACCGGTGAAGA+TGG | 0.598678 | 1.1:+12898844 | MS.gene31722:CDS |
AATAATCAGATCTGAATCAG+AGG | 0.600679 | 1.1:-12900015 | None:intergenic |
TCACGATCAACAATCGTCAC+AGG | 0.605235 | 1.1:-12906429 | None:intergenic |
TCATCGTCAACAATCGTCAC+AGG | 0.605235 | 1.1:-12906798 | None:intergenic |
TCACCATCAACAATCGTCAC+AGG | 0.605235 | 1.1:-12907536 | None:intergenic |
ACATCCAAGGTGGAGGATGG+GGG | 0.608240 | 1.1:+12907593 | MS.gene31722:CDS |
TCACAGTCAACAATCGTCAC+AGG | 0.608886 | 1.1:-12907044 | None:intergenic |
GGCAGGGAGGATATAGGAGA+AGG | 0.611502 | 1.1:+12899723 | MS.gene31722:CDS |
TCACCGTCAACAATCGTCAC+AGG | 0.613571 | 1.1:-12906552 | None:intergenic |
TCACCACCAACAATCGTCAC+AGG | 0.613571 | 1.1:-12907167 | None:intergenic |
TCACCGTCAACAATCGTCAC+AGG | 0.613571 | 1.1:-12907290 | None:intergenic |
TCACCGTCAACAATCGTCAC+AGG | 0.613571 | 1.1:-12907413 | None:intergenic |
TCACCGTCAACAATCATCAC+AGG | 0.615205 | 1.1:-12906675 | None:intergenic |
TCACCGTCAACAATCATCAC+AGG | 0.615205 | 1.1:-12906921 | None:intergenic |
CACAAACACATCCAAGGTGG+AGG | 0.617727 | 1.1:+12907586 | MS.gene31722:CDS |
AGGAGCACAAGAATAAGCGT+AGG | 0.618087 | 1.1:+12908883 | MS.gene31722:CDS |
TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.1:-12906613 | None:intergenic |
TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.1:-12906859 | None:intergenic |
TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.1:-12907105 | None:intergenic |
TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.1:-12907228 | None:intergenic |
TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.1:-12907474 | None:intergenic |
AAACATGATTCGTCACGCCA+AGG | 0.622095 | 1.1:-12901533 | None:intergenic |
CGCCAATACGAAACATGGAA+GGG | 0.626490 | 1.1:+12908022 | MS.gene31722:CDS |
TCATATCTTGATATGTACCC+TGG | 0.627414 | 1.1:+12900475 | MS.gene31722:CDS |
CTATCATCAGGATTATATGT+GGG | 0.628242 | 1.1:-12899633 | None:intergenic |
GAATACCACAAACACATCCA+AGG | 0.629121 | 1.1:+12906473 | MS.gene31722:CDS |
GAATACCACAAACACATCCA+AGG | 0.629121 | 1.1:+12906719 | MS.gene31722:CDS |
GAATACCACAAACACATCCA+AGG | 0.629121 | 1.1:+12906842 | MS.gene31722:CDS |
GAATACCACAAACACATCCA+AGG | 0.629121 | 1.1:+12907088 | MS.gene31722:CDS |
GAATACCACAAACACATCCA+AGG | 0.629121 | 1.1:+12907211 | MS.gene31722:CDS |
GAATACCACAAACACATCCA+AGG | 0.629121 | 1.1:+12907457 | MS.gene31722:CDS |
GAATACCACAAACACATCCA+AGG | 0.629121 | 1.1:+12907580 | MS.gene31722:CDS |
ATAAAAGAATAAGATCAGAA+AGG | 0.630009 | 1.1:+12898287 | MS.gene31722:CDS |
ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.1:+12906480 | MS.gene31722:CDS |
ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.1:+12906726 | MS.gene31722:CDS |
ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.1:+12906849 | MS.gene31722:CDS |
ACGAACACATCCAAGGTGGA+GGG | 0.632692 | 1.1:+12906972 | MS.gene31722:CDS |
ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.1:+12907095 | MS.gene31722:CDS |
ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.1:+12907218 | MS.gene31722:CDS |
ACGAACACATCCAAGGTGGA+GGG | 0.632692 | 1.1:+12907341 | MS.gene31722:CDS |
ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.1:+12907464 | MS.gene31722:CDS |
TGTTCTAGCAATCACAGTGG+AGG | 0.641587 | 1.1:+12899552 | MS.gene31722:CDS |
GGAGCACAAGAATAAGCGTA+GGG | 0.642841 | 1.1:+12908884 | MS.gene31722:CDS |
GTCAACTTTGACAACAACAC+TGG | 0.643796 | 1.1:+12899702 | MS.gene31722:CDS |
GTGGAGGGTAGTGATTCGCT+AGG | 0.644159 | 1.1:+12906495 | MS.gene31722:CDS |
CCGTATCATGTATTGTACCC+TGG | 0.646377 | 1.1:+12908082 | MS.gene31722:CDS |
TGATCATGCTATAGATGATG+AGG | 0.646689 | 1.1:+12899170 | MS.gene31722:CDS |
CACCAACACATCCAATGTGG+AGG | 0.647402 | 1.1:+12899980 | MS.gene31722:CDS |
GAATTCCACAAACACATCCA+AGG | 0.648287 | 1.1:+12906596 | MS.gene31722:CDS |
GAATACCACGAACACATCCA+AGG | 0.648592 | 1.1:+12906965 | MS.gene31722:CDS |
GAATACCACGAACACATCCA+AGG | 0.648592 | 1.1:+12907334 | MS.gene31722:CDS |
GGTTCAAATGGCAACAACAG+TGG | 0.648728 | 1.1:+12899573 | MS.gene31722:CDS |
CTTTGACAACAACACTGGCA+GGG | 0.650372 | 1.1:+12899707 | MS.gene31722:CDS |
GTGGAGGGTAGGGAGTCACT+AGG | 0.653627 | 1.1:+12906741 | MS.gene31722:CDS |
GTGGAGGGTAGGGAGTCACT+AGG | 0.653627 | 1.1:+12906987 | MS.gene31722:CDS |
GTGGAGGGTAGGGAGTCACT+AGG | 0.653627 | 1.1:+12907356 | MS.gene31722:CDS |
ACATCATCGCTAATATGACC+AGG | 0.654247 | 1.1:-12906318 | None:intergenic |
CGCCATCTAGAAACACGGCG+GGG | 0.655124 | 1.1:+12900415 | MS.gene31722:CDS |
ACAAACACATCCAAGGTGGA+GGG | 0.659544 | 1.1:+12906603 | MS.gene31722:CDS |
GGTCATATTAGCGATGATGT+TGG | 0.671445 | 1.1:+12906321 | MS.gene31722:CDS |
GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.1:+12906618 | MS.gene31722:CDS |
GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.1:+12906864 | MS.gene31722:CDS |
GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.1:+12907110 | MS.gene31722:CDS |
GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.1:+12907233 | MS.gene31722:CDS |
GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.1:+12907479 | MS.gene31722:CDS |
AAGGCTGAAACCTTCCCAAG+AGG | 0.680894 | 1.1:-12901514 | None:intergenic |
GGTGATAAGGAGTATATGCG+TGG | 0.687012 | 1.1:+12906570 | MS.gene31722:CDS |
GGTGATAAGGAGTATATGCG+TGG | 0.687012 | 1.1:+12906693 | MS.gene31722:CDS |
GGTGATAAGGAGTATATGCG+TGG | 0.687012 | 1.1:+12906939 | MS.gene31722:CDS |
GGTGATAAGGAGTATATGCG+TGG | 0.687012 | 1.1:+12907308 | MS.gene31722:CDS |
TACCACCAACACATCCAATG+TGG | 0.690065 | 1.1:+12899977 | MS.gene31722:CDS |
CCAATACGAAACATGGAAGG+GGG | 0.690311 | 1.1:+12908024 | MS.gene31722:CDS |
AAAGAATAAGATCAGAAAGG+CGG | 0.691605 | 1.1:+12898290 | MS.gene31722:CDS |
AATGGGGCGAGCTTTAGTCA+AGG | 0.693403 | 1.1:+12898210 | None:intergenic |
TGTGCTAGTAATCATAGTGG+TGG | 0.696966 | 1.1:+12899666 | MS.gene31722:CDS |
AAGAACGCCATCTAGAAACA+CGG | 0.697862 | 1.1:+12900410 | MS.gene31722:CDS |
GATTGTGCTAGTAATCATAG+TGG | 0.698345 | 1.1:+12899663 | MS.gene31722:CDS |
ATATGACCAGGATCATATCG+AGG | 0.702493 | 1.1:-12906306 | None:intergenic |
TTCCACAAACACATCCAAGG+TGG | 0.704424 | 1.1:+12906599 | MS.gene31722:CDS |
TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.1:+12906476 | MS.gene31722:CDS |
TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.1:+12906722 | MS.gene31722:CDS |
TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.1:+12906845 | MS.gene31722:CDS |
TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.1:+12907091 | MS.gene31722:CDS |
TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.1:+12907214 | MS.gene31722:CDS |
TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.1:+12907460 | MS.gene31722:CDS |
TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.1:+12907583 | MS.gene31722:CDS |
TGACAACAACACTGGCAGGG+AGG | 0.717471 | 1.1:+12899710 | MS.gene31722:CDS |
TTTGAATCATATGACACTGA+AGG | 0.718222 | 1.1:+12908049 | MS.gene31722:CDS |
TACCACGAACACATCCAAGG+TGG | 0.721036 | 1.1:+12906968 | MS.gene31722:CDS |
TACCACGAACACATCCAAGG+TGG | 0.721036 | 1.1:+12907337 | MS.gene31722:CDS |
GATGATAAAGAGTTTGTGTG+TGG | 0.722911 | 1.1:+12906816 | MS.gene31722:CDS |
GACAGTGCTAGTAATCGTCG+CGG | 0.728262 | 1.1:+12906213 | MS.gene31722:intron |
AACGCCATCTAGAAACACGG+CGG | 0.728813 | 1.1:+12900413 | MS.gene31722:CDS |
TGTGATAAGGAGTATGTGTG+TGG | 0.732153 | 1.1:+12907062 | MS.gene31722:CDS |
GGTGATAAGGAGTTTGTGTG+TGG | 0.733498 | 1.1:+12907431 | MS.gene31722:CDS |
GGTGATAAGGAGTATATGCG+TGG | 0.735259 | 1.1:+12907554 | MS.gene31722:CDS |
AATCTGGGAAGTGAGTCACT+AGG | 0.740246 | 1.1:+12906372 | MS.gene31722:CDS |
CGTGATAAGGAGTATGTGCG+TGG | 0.740725 | 1.1:+12906447 | MS.gene31722:CDS |
GGTGATAAGGAGTATATGCG+TGG | 0.748740 | 1.1:+12907185 | MS.gene31722:CDS |
GATTGTTCTAGCAATCACAG+TGG | 0.775836 | 1.1:+12899549 | MS.gene31722:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 12898211 | 12909201 | 12898211 | ID=MS.gene31722 |
chr1.1 | mRNA | 12898211 | 12909201 | 12898211 | ID=MS.gene31722.t1;Parent=MS.gene31722 |
chr1.1 | exon | 12898211 | 12900100 | 12898211 | ID=MS.gene31722.t1.exon1;Parent=MS.gene31722.t1 |
chr1.1 | CDS | 12898211 | 12900100 | 12898211 | ID=cds.MS.gene31722.t1;Parent=MS.gene31722.t1 |
chr1.1 | exon | 12900256 | 12900496 | 12900256 | ID=MS.gene31722.t1.exon2;Parent=MS.gene31722.t1 |
chr1.1 | CDS | 12900256 | 12900496 | 12900256 | ID=cds.MS.gene31722.t1;Parent=MS.gene31722.t1 |
chr1.1 | exon | 12901199 | 12901278 | 12901199 | ID=MS.gene31722.t1.exon3;Parent=MS.gene31722.t1 |
chr1.1 | CDS | 12901199 | 12901278 | 12901199 | ID=cds.MS.gene31722.t1;Parent=MS.gene31722.t1 |
chr1.1 | exon | 12901506 | 12901573 | 12901506 | ID=MS.gene31722.t1.exon4;Parent=MS.gene31722.t1 |
chr1.1 | CDS | 12901506 | 12901573 | 12901506 | ID=cds.MS.gene31722.t1;Parent=MS.gene31722.t1 |
chr1.1 | exon | 12906218 | 12907706 | 12906218 | ID=MS.gene31722.t1.exon5;Parent=MS.gene31722.t1 |
chr1.1 | CDS | 12906218 | 12907706 | 12906218 | ID=cds.MS.gene31722.t1;Parent=MS.gene31722.t1 |
chr1.1 | exon | 12907863 | 12908103 | 12907863 | ID=MS.gene31722.t1.exon6;Parent=MS.gene31722.t1 |
chr1.1 | CDS | 12907863 | 12908103 | 12907863 | ID=cds.MS.gene31722.t1;Parent=MS.gene31722.t1 |
chr1.1 | exon | 12908862 | 12908944 | 12908862 | ID=MS.gene31722.t1.exon7;Parent=MS.gene31722.t1 |
chr1.1 | CDS | 12908862 | 12908944 | 12908862 | ID=cds.MS.gene31722.t1;Parent=MS.gene31722.t1 |
chr1.1 | exon | 12909091 | 12909201 | 12909091 | ID=MS.gene31722.t1.exon8;Parent=MS.gene31722.t1 |
chr1.1 | CDS | 12909091 | 12909201 | 12909091 | ID=cds.MS.gene31722.t1;Parent=MS.gene31722.t1 |
Gene Sequence |
Protein sequence |