Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32029.t1 | XP_013457081.1 | 93.2 | 459 | 23 | 3 | 1 | 459 | 1 | 451 | 5.30E-242 | 846.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32029.t1 | Q94BX4 | 78.6 | 444 | 83 | 1 | 7 | 450 | 3 | 434 | 2.1e-202 | 706.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32029.t1 | A0A072UN35 | 93.2 | 459 | 23 | 3 | 1 | 459 | 1 | 451 | 3.8e-242 | 846.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052513 | MS.gene32029 | 0.902159 | 1.29E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32029 | MS.gene77885 | PPI |
| MS.gene32029 | MS.gene81663 | PPI |
| MS.gene32029 | MS.gene29768 | PPI |
| MS.gene32029 | MS.gene81660 | PPI |
| MS.gene32029 | MS.gene90626 | PPI |
| MS.gene32029 | MS.gene92674 | PPI |
| MS.gene32029 | MS.gene91851 | PPI |
| MS.gene32029 | MS.gene46611 | PPI |
| MS.gene81658 | MS.gene32029 | PPI |
| MS.gene32029 | MS.gene98540 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32029.t1 | MTR_4g089065 | 92.857 | 462 | 19 | 3 | 1 | 459 | 1 | 451 | 0.0 | 872 |
| MS.gene32029.t1 | MTR_2g095220 | 82.710 | 428 | 64 | 2 | 6 | 433 | 4 | 421 | 0.0 | 729 |
| MS.gene32029.t1 | MTR_2g095220 | 83.459 | 399 | 56 | 2 | 6 | 404 | 4 | 392 | 0.0 | 679 |
| MS.gene32029.t1 | MTR_2g095220 | 82.462 | 325 | 47 | 2 | 6 | 330 | 4 | 318 | 0.0 | 541 |
| MS.gene32029.t1 | MTR_2g047140 | 90.000 | 70 | 7 | 0 | 44 | 113 | 140 | 209 | 6.18e-36 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32029.t1 | AT3G45100 | 78.604 | 444 | 83 | 1 | 7 | 450 | 3 | 434 | 0.0 | 706 |
| MS.gene32029.t1 | AT3G45100 | 78.604 | 444 | 83 | 1 | 7 | 450 | 3 | 434 | 0.0 | 706 |
| MS.gene32029.t1 | AT3G45100 | 78.604 | 444 | 83 | 1 | 7 | 450 | 3 | 434 | 0.0 | 706 |
| MS.gene32029.t1 | AT1G73160 | 26.648 | 364 | 218 | 12 | 25 | 360 | 98 | 440 | 4.94e-19 | 90.1 |
Find 109 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAGAATAGTTCTTATAAT+TGG | 0.157108 | 4.3:+23659479 | None:intergenic |
| GTCCAGTCTGTTCTAATAAA+AGG | 0.158479 | 4.3:-23658370 | MS.gene32029:CDS |
| TTGAAGGTTCGTTTCATTAT+TGG | 0.197372 | 4.3:-23658490 | MS.gene32029:intron |
| GCAGCATAGTTATCGCCTTC+TGG | 0.281379 | 4.3:+23656935 | None:intergenic |
| TGAAAAGCATTCGATTCTTA+TGG | 0.288138 | 4.3:-23660076 | MS.gene32029:CDS |
| GGCGGAGGCGGAGGCGGAGG+AGG | 0.302269 | 4.3:-23659141 | MS.gene32029:CDS |
| GGATGCAATCGACACACTTC+TGG | 0.311306 | 4.3:+23659029 | None:intergenic |
| AACACATTTCCAACTTTGTA+TGG | 0.315745 | 4.3:-23659509 | MS.gene32029:CDS |
| GCCTCCGACACTGGCTTAAA+TGG | 0.316977 | 4.3:+23659161 | None:intergenic |
| CAAGCAAGTCGGCTCCTTTA+CGG | 0.323790 | 4.3:+23659063 | None:intergenic |
| ATATACAATTTCGGTCCTTT+TGG | 0.324635 | 4.3:+23656766 | None:intergenic |
| TCGCCCAACCGTGATGGATT+TGG | 0.347022 | 4.3:-23656155 | MS.gene32029:CDS |
| CAAGATCGAGTTGGTTTGTT+GGG | 0.351826 | 4.3:-23658412 | MS.gene32029:CDS |
| ACAACTAGCAGCCTCTAATA+TGG | 0.367430 | 4.3:+23657224 | None:intergenic |
| TCCGCCTCCGCCTCCGACAC+TGG | 0.369391 | 4.3:+23659152 | None:intergenic |
| GGAGGCGGAGGCGGAGGCGG+AGG | 0.372171 | 4.3:-23659144 | MS.gene32029:CDS |
| TTGGCAGTGTCAACAGCATT+AGG | 0.387563 | 4.3:+23659191 | None:intergenic |
| TCCTCCAACCGTACACGTTT+AGG | 0.399496 | 4.3:+23658457 | None:intergenic |
| GTCGGAGGCGGAGGCGGAGG+CGG | 0.401289 | 4.3:-23659147 | MS.gene32029:CDS |
| AGCACGATCATATACAATTT+CGG | 0.403550 | 4.3:+23656757 | None:intergenic |
| GCCAGTGTCGGAGGCGGAGG+CGG | 0.403742 | 4.3:-23659153 | MS.gene32029:CDS |
| AACCTTCTCCGGCGCCAAAC+CGG | 0.405406 | 4.3:+23659223 | None:intergenic |
| TTTACCGATCATTCCTTGAA+TGG | 0.407272 | 4.3:-23659359 | MS.gene32029:CDS |
| TGAGAATAGTTCTTATAATT+GGG | 0.413206 | 4.3:+23659480 | None:intergenic |
| ACCAGATGATATGATTGTTT+TGG | 0.414859 | 4.3:-23656992 | MS.gene32029:CDS |
| GTCCGGTTTGGCGCCGGAGA+AGG | 0.430100 | 4.3:-23659225 | MS.gene32029:CDS |
| CCATGATTCTAGCATGCATA+AGG | 0.430190 | 4.3:+23659396 | None:intergenic |
| GACACCTCTCTTGCGGAGCA+TGG | 0.430975 | 4.3:-23656374 | MS.gene32029:CDS |
| CATGCTTATGGAAAACGCTC+TGG | 0.432407 | 4.3:-23659596 | MS.gene32029:CDS |
| AGTGTCGGAGGCGGAGGCGG+AGG | 0.432443 | 4.3:-23659150 | MS.gene32029:CDS |
| CGTTTCATTATTGGAGGTGA+TGG | 0.435650 | 4.3:-23658481 | MS.gene32029:CDS |
| CTCTCTTGCGGAGCATGGGC+AGG | 0.437196 | 4.3:-23656369 | MS.gene32029:CDS |
| AGCATCACTAAAACCATTCA+AGG | 0.443771 | 4.3:+23659346 | None:intergenic |
| TACCTTGGCAGATGTGAGTC+AGG | 0.451847 | 4.3:-23659291 | MS.gene32029:CDS |
| CTCATGACAAAGTGTTGAAA+AGG | 0.457480 | 4.3:+23659421 | None:intergenic |
| GCCAAAACAATCATATCATC+TGG | 0.465468 | 4.3:+23656991 | None:intergenic |
| TCAAGATCGAGTTGGTTTGT+TGG | 0.467716 | 4.3:-23658413 | MS.gene32029:CDS |
| CCTTATGCATGCTAGAATCA+TGG | 0.471659 | 4.3:-23659396 | MS.gene32029:CDS |
| TTTGAGGTCCGGTTTGGCGC+CGG | 0.472709 | 4.3:-23659231 | MS.gene32029:CDS |
| TCCAGTCTGTTCTAATAAAA+GGG | 0.474939 | 4.3:-23658369 | MS.gene32029:CDS |
| TAAGCCAGTGTCGGAGGCGG+AGG | 0.475197 | 4.3:-23659156 | MS.gene32029:CDS |
| TTCTCGACACCACCAACGTT+GGG | 0.478477 | 4.3:+23660036 | None:intergenic |
| ATGCTTATGGAAAACGCTCT+GGG | 0.482017 | 4.3:-23659595 | MS.gene32029:CDS |
| TATTGTTGTTATCAGTCGAT+TGG | 0.482179 | 4.3:-23659090 | MS.gene32029:CDS |
| CCCTCCAAATCCATCACGGT+TGG | 0.485277 | 4.3:+23656151 | None:intergenic |
| AGAACCTGATCCAAGTGATA+TGG | 0.488416 | 4.3:-23656968 | MS.gene32029:CDS |
| GTGGTTGTAACTCATGCTTA+TGG | 0.491032 | 4.3:-23659608 | MS.gene32029:CDS |
| AGTCGATTGGTTTACCGTAA+AGG | 0.496026 | 4.3:-23659077 | MS.gene32029:CDS |
| AAGGTTCGTTTCATTATTGG+AGG | 0.502256 | 4.3:-23658487 | MS.gene32029:CDS |
| CCTTGTGGCCTAAGTTGAGC+AGG | 0.506293 | 4.3:+23659989 | None:intergenic |
| TCTCAATGCCTGCTCAACTT+AGG | 0.508173 | 4.3:-23659997 | MS.gene32029:CDS |
| TTAGCCTGCTGATGATATTG+AGG | 0.508216 | 4.3:-23656198 | MS.gene32029:intron |
| ATTCTCTCGCCCAACCGTGA+TGG | 0.508522 | 4.3:-23656161 | MS.gene32029:CDS |
| TGGCTTAAATGGCTTAAACT+TGG | 0.511102 | 4.3:+23659172 | None:intergenic |
| CGCACCATATCACTTGGATC+AGG | 0.514256 | 4.3:+23656964 | None:intergenic |
| ATGTGTTTCTCATACAAGTA+AGG | 0.514270 | 4.3:-23659264 | MS.gene32029:CDS |
| CCCAACCGTGATGGATTTGG+AGG | 0.514955 | 4.3:-23656152 | MS.gene32029:CDS |
| TGCTAGAATCATGGGATACA+AGG | 0.515986 | 4.3:-23659387 | MS.gene32029:CDS |
| CCTCCAAATCCATCACGGTT+GGG | 0.516370 | 4.3:+23656152 | None:intergenic |
| TAAAAGTCTACTATGTTCCA+TGG | 0.517005 | 4.3:-23659550 | MS.gene32029:CDS |
| ATATTAGAGGCTGCTAGTTG+TGG | 0.519552 | 4.3:-23657222 | MS.gene32029:CDS |
| CATTCTCTTCAAGATCGAGT+TGG | 0.519737 | 4.3:-23658421 | MS.gene32029:CDS |
| CTGCCCATGCTCCGCAAGAG+AGG | 0.520071 | 4.3:+23656370 | None:intergenic |
| GGGAGTGTTCCATACAAAGT+TGG | 0.520624 | 4.3:+23659500 | None:intergenic |
| GCCTCCTCAATATCATCAGC+AGG | 0.523174 | 4.3:+23656194 | None:intergenic |
| ACACCTCTCTTGCGGAGCAT+GGG | 0.525914 | 4.3:-23656373 | MS.gene32029:CDS |
| GCCATTTAAGCCAGTGTCGG+AGG | 0.528866 | 4.3:-23659162 | MS.gene32029:CDS |
| CATGATTCTAGCATGCATAA+GGG | 0.530621 | 4.3:+23659397 | None:intergenic |
| CTTATGCATGCTAGAATCAT+GGG | 0.543612 | 4.3:-23659395 | MS.gene32029:CDS |
| ACCTAAACGTGTACGGTTGG+AGG | 0.551551 | 4.3:-23658458 | MS.gene32029:CDS |
| GCGTATATTGGAGCTATGGC+AGG | 0.555266 | 4.3:-23656304 | MS.gene32029:intron |
| GCTGGCATGATGTTGCCAAA+AGG | 0.559543 | 4.3:-23656781 | MS.gene32029:CDS |
| TATGGCGTATATTGGAGCTA+TGG | 0.563402 | 4.3:-23656308 | MS.gene32029:CDS |
| TGATTAAAGAATGGTCTCCA+TGG | 0.563439 | 4.3:+23659533 | None:intergenic |
| GAAAGAATTACCGTTGTGCA+TGG | 0.568216 | 4.3:-23659452 | MS.gene32029:CDS |
| TGATGATATTGAGGAGGCGC+CGG | 0.576740 | 4.3:-23656189 | MS.gene32029:CDS |
| TTGGGCGAGAGAATGAAATC+CGG | 0.582564 | 4.3:+23656170 | None:intergenic |
| AAAACCATTCAAGGAATGAT+CGG | 0.584527 | 4.3:+23659355 | None:intergenic |
| ACTCGATTGTGCATGACTTG+AGG | 0.587904 | 4.3:+23656901 | None:intergenic |
| TAAGCCATTTAAGCCAGTGT+CGG | 0.590717 | 4.3:-23659165 | MS.gene32029:CDS |
| AGATGAGGGAACTCTATAGC+TGG | 0.592152 | 4.3:-23656799 | MS.gene32029:CDS |
| ATTGCGCGCACCATATCACT+TGG | 0.596121 | 4.3:+23656958 | None:intergenic |
| ATTTAAGCCAGTGTCGGAGG+CGG | 0.597549 | 4.3:-23659159 | MS.gene32029:CDS |
| TGGACCTAAACGTGTACGGT+TGG | 0.605008 | 4.3:-23658461 | MS.gene32029:CDS |
| ACAATTTCCGATCCGCTAGG+AGG | 0.612287 | 4.3:+23659113 | None:intergenic |
| CCTGCTCAACTTAGGCCACA+AGG | 0.612330 | 4.3:-23659989 | MS.gene32029:intron |
| TATGGTGCGCGCAATCCAGA+AGG | 0.612446 | 4.3:-23656950 | MS.gene32029:CDS |
| GTGATGGACCTAAACGTGTA+CGG | 0.614142 | 4.3:-23658465 | MS.gene32029:CDS |
| AATGTGTTCTGATTAAAGAA+TGG | 0.616415 | 4.3:+23659524 | None:intergenic |
| AGTTGAGCAGGCATTGAGAG+AGG | 0.618386 | 4.3:+23660001 | None:intergenic |
| ATAACAATTTCCGATCCGCT+AGG | 0.619141 | 4.3:+23659110 | None:intergenic |
| ATCTACTTGAACGACTCTCA+CGG | 0.623084 | 4.3:-23656715 | MS.gene32029:intron |
| GGAGCGTCCTCCTAGCGGAT+CGG | 0.629974 | 4.3:-23659120 | MS.gene32029:CDS |
| AGCCTGACTCACATCTGCCA+AGG | 0.635692 | 4.3:+23659289 | None:intergenic |
| ATTCTCGACACCACCAACGT+TGG | 0.636477 | 4.3:+23660035 | None:intergenic |
| GCCTGCTGATGATATTGAGG+AGG | 0.642745 | 4.3:-23656195 | MS.gene32029:CDS |
| TGGAAGTATTCACATGAACA+AGG | 0.644287 | 4.3:-23659324 | MS.gene32029:CDS |
| TCTGGGGTCAGATACATGAC+AGG | 0.646517 | 4.3:-23659578 | MS.gene32029:CDS |
| ACGCGTCGGAGGTGTTCCTG+AGG | 0.652194 | 4.3:-23657181 | MS.gene32029:intron |
| CCAACCGTGATGGATTTGGA+GGG | 0.655955 | 4.3:-23656151 | MS.gene32029:CDS |
| TCATACAAGTAAGGAGAACA+CGG | 0.658070 | 4.3:-23659255 | MS.gene32029:CDS |
| ACAGTTAGCACACGCGTCGG+AGG | 0.658214 | 4.3:-23657192 | MS.gene32029:CDS |
| TGCTTATGGAAAACGCTCTG+GGG | 0.662549 | 4.3:-23659594 | MS.gene32029:CDS |
| GAGGAGGAGCGTCCTCCTAG+CGG | 0.667739 | 4.3:-23659125 | MS.gene32029:CDS |
| AATGACTTCAACAAGCAAGT+CGG | 0.671637 | 4.3:+23659052 | None:intergenic |
| ACATCCCTCCAAATCCATCA+CGG | 0.683561 | 4.3:+23656147 | None:intergenic |
| GGGGTCAGATACATGACAGG+TGG | 0.683959 | 4.3:-23659575 | MS.gene32029:CDS |
| TTAACAGTTAGCACACGCGT+CGG | 0.711950 | 4.3:-23657195 | MS.gene32029:CDS |
| GGTTTGATGTCCATGCACAA+CGG | 0.712542 | 4.3:+23659442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATTTATGATATAAG+TGG | + | chr4.3:23656320-23656339 | None:intergenic | 10.0% |
| !! | TCTAAAAATTACAATTTATT+TGG | + | chr4.3:23657649-23657668 | None:intergenic | 10.0% |
| !!! | AAATTGTAATTTTTAGAATT+TGG | - | chr4.3:23657652-23657671 | MS.gene32029:intron | 10.0% |
| !!! | TTATTAATTTGAAGATATTA+AGG | - | chr4.3:23658853-23658872 | MS.gene32029:intron | 10.0% |
| !! | CACAATATTTATATGATTAT+TGG | - | chr4.3:23657557-23657576 | MS.gene32029:intron | 15.0% |
| !! | TGTGAAAATGAATATTAAAA+GGG | + | chr4.3:23657541-23657560 | None:intergenic | 15.0% |
| !! | TTGTGAAAATGAATATTAAA+AGG | + | chr4.3:23657542-23657561 | None:intergenic | 15.0% |
| !!! | AATTTTTTGCTTCAAATATA+AGG | - | chr4.3:23658093-23658112 | MS.gene32029:intron | 15.0% |
| !!! | ATATTTGAAGCAAAAAATTA+AGG | + | chr4.3:23658092-23658111 | None:intergenic | 15.0% |
| !!! | ATTATTCAAAATTTTGAAGT+CGG | - | chr4.3:23657440-23657459 | MS.gene32029:intron | 15.0% |
| !!! | ATTTTTTGCTTCAAATATAA+GGG | - | chr4.3:23658094-23658113 | MS.gene32029:intron | 15.0% |
| !!! | GATATTATTTATTTTGTATC+TGG | - | chr4.3:23658906-23658925 | MS.gene32029:intron | 15.0% |
| !!! | TTTCTTTCTTTTAAGTTTTA+TGG | - | chr4.3:23657905-23657924 | MS.gene32029:intron | 15.0% |
| !! | AACTAATACCTAATGAATTA+AGG | - | chr4.3:23659754-23659773 | MS.gene32029:intron | 20.0% |
| !! | AAGAATAGAAAAAATACTTG+TGG | + | chr4.3:23659059-23659078 | None:intergenic | 20.0% |
| !! | AAGAATTATATCTCTTGAAA+AGG | - | chr4.3:23656427-23656446 | MS.gene32029:intron | 20.0% |
| !! | AATAGAATCAAGTGAAATAA+TGG | - | chr4.3:23657623-23657642 | MS.gene32029:intron | 20.0% |
| !! | AGAATATATTGCAAAAAAAG+TGG | + | chr4.3:23657387-23657406 | None:intergenic | 20.0% |
| !! | AGGTTCAATATAATTCTAAT+AGG | - | chr4.3:23659529-23659548 | MS.gene32029:CDS | 20.0% |
| !! | TCAAAGATAAACTACATAAA+AGG | + | chr4.3:23659098-23659117 | None:intergenic | 20.0% |
| !! | TGAGAATAGTTCTTATAATT+GGG | + | chr4.3:23656731-23656750 | None:intergenic | 20.0% |
| !! | TTAATTCTTCTTTAGTTGTT+GGG | - | chr4.3:23658058-23658077 | MS.gene32029:intron | 20.0% |
| !! | TTATAGTTAATAACAGCAAT+AGG | + | chr4.3:23658527-23658546 | None:intergenic | 20.0% |
| !! | TTATTTCACTTGATTCTATT+AGG | + | chr4.3:23657623-23657642 | None:intergenic | 20.0% |
| !!! | AAATTTTGAATAATGCAAAG+AGG | + | chr4.3:23657434-23657453 | None:intergenic | 20.0% |
| !!! | AACAAACATCTTTAAGAAAA+AGG | - | chr4.3:23658253-23658272 | MS.gene32029:intron | 20.0% |
| ! | AAATGTAATTACCAATGATC+AGG | - | chr4.3:23656575-23656594 | MS.gene32029:intron | 25.0% |
| ! | AACAATTCAACAGTTATTAC+GGG | + | chr4.3:23658661-23658680 | None:intergenic | 25.0% |
| ! | AATGTGTTCTGATTAAAGAA+TGG | + | chr4.3:23656687-23656706 | None:intergenic | 25.0% |
| ! | ATAACTATTCTATAAACCCA+GGG | - | chr4.3:23658466-23658485 | MS.gene32029:CDS | 25.0% |
| ! | ATTAATTTAACAAATCCCCT+GGG | + | chr4.3:23658485-23658504 | None:intergenic | 25.0% |
| ! | CAACAATTCAACAGTTATTA+CGG | + | chr4.3:23658662-23658681 | None:intergenic | 25.0% |
| ! | CTTAATTCTTCTTTAGTTGT+TGG | - | chr4.3:23658057-23658076 | MS.gene32029:intron | 25.0% |
| ! | GACATAATGGTATTAACTTA+TGG | - | chr4.3:23657270-23657289 | MS.gene32029:intron | 25.0% |
| ! | GTGAGAATAGTTCTTATAAT+TGG | + | chr4.3:23656732-23656751 | None:intergenic | 25.0% |
| ! | GTGCAAAATGATTAATTCTT+TGG | + | chr4.3:23656464-23656483 | None:intergenic | 25.0% |
| ! | TATACAAAAAGCTTCTGTTA+AGG | + | chr4.3:23658963-23658982 | None:intergenic | 25.0% |
| ! | TCACTATTATACAACATTTC+TGG | - | chr4.3:23658018-23658037 | MS.gene32029:intron | 25.0% |
| ! | TGTAAGTTCCTTAATTCATT+AGG | + | chr4.3:23659765-23659784 | None:intergenic | 25.0% |
| ! | TGTTGTATAATAGTGAATCT+CGG | + | chr4.3:23658014-23658033 | None:intergenic | 25.0% |
| !! | AAACATCTTTAAGAAAAAGG+AGG | - | chr4.3:23658256-23658275 | MS.gene32029:intron | 25.0% |
| !! | AGTAGTAAAACAGTGTATTT+TGG | - | chr4.3:23659665-23659684 | MS.gene32029:intron | 25.0% |
| !! | ATCTAGATTTTTGTCTAATG+TGG | - | chr4.3:23657248-23657267 | MS.gene32029:CDS | 25.0% |
| !! | CATATTTTCTTAAACAGGTT+TGG | - | chr4.3:23657862-23657881 | MS.gene32029:intron | 25.0% |
| !! | GATTAAAGAATTTTATGCTC+AGG | + | chr4.3:23659624-23659643 | None:intergenic | 25.0% |
| !! | GTAGTAAAACAGTGTATTTT+GGG | - | chr4.3:23659666-23659685 | MS.gene32029:intron | 25.0% |
| !! | GTTTTTATCCATCCTTTATA+TGG | - | chr4.3:23658340-23658359 | MS.gene32029:intron | 25.0% |
| !! | TCTTGTCAATTCCAATATTT+TGG | - | chr4.3:23659142-23659161 | MS.gene32029:CDS | 25.0% |
| !! | TTTTTGTATAGCCATATTAG+AGG | - | chr4.3:23658973-23658992 | MS.gene32029:intron | 25.0% |
| !!! | AATTCCAATATTTTGGACTA+CGG | - | chr4.3:23659149-23659168 | MS.gene32029:CDS | 25.0% |
| !!! | TGATCTTCAGTTTTTTGTTA+TGG | - | chr4.3:23659882-23659901 | MS.gene32029:intron | 25.0% |
| !!! | TGTTTATTTTCTGTAGATGA+GGG | - | chr4.3:23659395-23659414 | MS.gene32029:CDS | 25.0% |
| !!! | TTATCATTTTTCACCATTCT+AGG | - | chr4.3:23656249-23656268 | MS.gene32029:intron | 25.0% |
| !!! | TTTTTTGTTATGGCGTATAT+TGG | - | chr4.3:23659892-23659911 | MS.gene32029:intron | 25.0% |
| AAAACAAGCCAACTTACATT+AGG | + | chr4.3:23657203-23657222 | None:intergenic | 30.0% | |
| AAAACCATTCAAGGAATGAT+CGG | + | chr4.3:23656856-23656875 | None:intergenic | 30.0% | |
| AACACATTTCCAACTTTGTA+TGG | - | chr4.3:23656699-23656718 | MS.gene32029:intron | 30.0% | |
| AACTTATGTATCCCATTTGA+AGG | - | chr4.3:23657702-23657721 | MS.gene32029:intron | 30.0% | |
| AAGAAATAAAGAACCTTTCC+AGG | + | chr4.3:23657891-23657910 | None:intergenic | 30.0% | |
| AATGAAACGAACCTTCAAAT+GGG | + | chr4.3:23657716-23657735 | None:intergenic | 30.0% | |
| ACAATTCAACAGTTATTACG+GGG | + | chr4.3:23658660-23658679 | None:intergenic | 30.0% | |
| AGCACGATCATATACAATTT+CGG | + | chr4.3:23659454-23659473 | None:intergenic | 30.0% | |
| AGTGGTTAAAGCAGTATATA+AGG | + | chr4.3:23656302-23656321 | None:intergenic | 30.0% | |
| AGTTGTAAAAGAAAATCCAC+TGG | - | chr4.3:23659559-23659578 | MS.gene32029:CDS | 30.0% | |
| ATGTGTTTCTCATACAAGTA+AGG | - | chr4.3:23656944-23656963 | MS.gene32029:CDS | 30.0% | |
| CAGATATTGAATGTTTGAAG+TGG | + | chr4.3:23658788-23658807 | None:intergenic | 30.0% | |
| CATTAATTTAACAAATCCCC+TGG | + | chr4.3:23658486-23658505 | None:intergenic | 30.0% | |
| CTGATGAAAGCAAAAGAAAA+GGG | + | chr4.3:23659352-23659371 | None:intergenic | 30.0% | |
| GATAACTATTCTATAAACCC+AGG | - | chr4.3:23658465-23658484 | MS.gene32029:CDS | 30.0% | |
| GTTGTATAATAGTGAATCTC+GGG | + | chr4.3:23658013-23658032 | None:intergenic | 30.0% | |
| TAAAAGTCTACTATGTTCCA+TGG | - | chr4.3:23656658-23656677 | MS.gene32029:intron | 30.0% | |
| TAAATGTAGCTAAGGTAGAA+AGG | - | chr4.3:23658725-23658744 | MS.gene32029:intron | 30.0% | |
| TAACTATTCTATAAACCCAG+GGG | - | chr4.3:23658467-23658486 | MS.gene32029:CDS | 30.0% | |
| TAATGAAACGAACCTTCAAA+TGG | + | chr4.3:23657717-23657736 | None:intergenic | 30.0% | |
| TAGATTCACTTCCTTACTAT+AGG | - | chr4.3:23659189-23659208 | MS.gene32029:CDS | 30.0% | |
| TATAAGGTGAAATAAGTGAG+TGG | + | chr4.3:23656286-23656305 | None:intergenic | 30.0% | |
| TCATACTACTTTAGATCAAC+AGG | - | chr4.3:23658411-23658430 | MS.gene32029:CDS | 30.0% | |
| TCCAGTCTGTTCTAATAAAA+GGG | - | chr4.3:23657839-23657858 | MS.gene32029:intron | 30.0% | |
| TGAATAATGCAAAGAGGTTA+AGG | + | chr4.3:23657428-23657447 | None:intergenic | 30.0% | |
| TTAAGGTTCAAATAGAAGAC+AGG | + | chr4.3:23657411-23657430 | None:intergenic | 30.0% | |
| TTAGATCAACAGGTACTTTA+GGG | - | chr4.3:23658421-23658440 | MS.gene32029:CDS | 30.0% | |
| TTGAAGGTTCGTTTCATTAT+TGG | - | chr4.3:23657718-23657737 | MS.gene32029:intron | 30.0% | |
| TTTAGATCAACAGGTACTTT+AGG | - | chr4.3:23658420-23658439 | MS.gene32029:CDS | 30.0% | |
| TTTGTCTAATGTGGACATAA+TGG | - | chr4.3:23657257-23657276 | MS.gene32029:intron | 30.0% | |
| ! | AACTTTAGCAATCCTTTTTC+TGG | - | chr4.3:23659711-23659730 | MS.gene32029:intron | 30.0% |
| ! | AATGATAATGTGATACCTTG+TGG | + | chr4.3:23656237-23656256 | None:intergenic | 30.0% |
| ! | ACCAGATGATATGATTGTTT+TGG | - | chr4.3:23659216-23659235 | MS.gene32029:CDS | 30.0% |
| ! | ATATACAATTTCGGTCCTTT+TGG | + | chr4.3:23659445-23659464 | None:intergenic | 30.0% |
| ! | ATGACTTGAGGATCAATTTT+AGG | + | chr4.3:23659298-23659317 | None:intergenic | 30.0% |
| ! | TATTGTTGTTATCAGTCGAT+TGG | - | chr4.3:23657118-23657137 | MS.gene32029:intron | 30.0% |
| ! | TTCTGATTTTCTGCATTGTT+GGG | + | chr4.3:23660096-23660115 | None:intergenic | 30.0% |
| !! | AAGGGCATATTTTCTTAAAC+AGG | - | chr4.3:23657857-23657876 | MS.gene32029:intron | 30.0% |
| !! | CTGTTTATTTTCTGTAGATG+AGG | - | chr4.3:23659394-23659413 | MS.gene32029:CDS | 30.0% |
| !! | GATAATGAAGCCATTTTAAG+TGG | - | chr4.3:23658118-23658137 | MS.gene32029:intron | 30.0% |
| !! | TGAAAAGCATTCGATTCTTA+TGG | - | chr4.3:23656132-23656151 | MS.gene32029:CDS | 30.0% |
| AAAAGGCAAATCATTCCAAG+AGG | + | chr4.3:23657299-23657318 | None:intergenic | 35.0% | |
| AAAGGCAAATCATTCCAAGA+GGG | + | chr4.3:23657298-23657317 | None:intergenic | 35.0% | |
| AAATGAAACAGAATGACCAG+TGG | + | chr4.3:23659578-23659597 | None:intergenic | 35.0% | |
| AAGGTTCGTTTCATTATTGG+AGG | - | chr4.3:23657721-23657740 | MS.gene32029:intron | 35.0% | |
| AATCTGCTTGTAACTTAAGC+TGG | - | chr4.3:23659640-23659659 | MS.gene32029:intron | 35.0% | |
| AATGACTTCAACAAGCAAGT+CGG | + | chr4.3:23657159-23657178 | None:intergenic | 35.0% | |
| ACAGTTATTACGGGGTTATT+TGG | + | chr4.3:23658652-23658671 | None:intergenic | 35.0% | |
| ACCAAGGATACATAAGCAAA+AGG | + | chr4.3:23658702-23658721 | None:intergenic | 35.0% | |
| ACTCTCAACCATATAAAGGA+TGG | + | chr4.3:23658351-23658370 | None:intergenic | 35.0% | |
| AGCATCACTAAAACCATTCA+AGG | + | chr4.3:23656865-23656884 | None:intergenic | 35.0% | |
| ATAACTTATTGTGCTGTCTG+AGG | - | chr4.3:23656524-23656543 | MS.gene32029:intron | 35.0% | |
| ATCTGGTACAACCTATAGTA+AGG | + | chr4.3:23659203-23659222 | None:intergenic | 35.0% | |
| ATGACCGTAGTCCAAAATAT+TGG | + | chr4.3:23659156-23659175 | None:intergenic | 35.0% | |
| ATTATCCAAACAGAGCCTTA+GGG | - | chr4.3:23656367-23656386 | MS.gene32029:CDS | 35.0% | |
| ATTTGTGACACAACTTAGCT+TGG | + | chr4.3:23658813-23658832 | None:intergenic | 35.0% | |
| CAGTTATTACGGGGTTATTT+GGG | + | chr4.3:23658651-23658670 | None:intergenic | 35.0% | |
| CATCACTCTCAACCATATAA+AGG | + | chr4.3:23658355-23658374 | None:intergenic | 35.0% | |
| CATGATTCTAGCATGCATAA+GGG | + | chr4.3:23656814-23656833 | None:intergenic | 35.0% | |
| CCTGATGAAAGCAAAAGAAA+AGG | + | chr4.3:23659353-23659372 | None:intergenic | 35.0% | |
| CTTATGCATGCTAGAATCAT+GGG | - | chr4.3:23656813-23656832 | MS.gene32029:intron | 35.0% | |
| GAACTTCTTGTACCAGAAAA+AGG | + | chr4.3:23659726-23659745 | None:intergenic | 35.0% | |
| GATTGCATCCTAATGTAAGT+TGG | - | chr4.3:23657192-23657211 | MS.gene32029:CDS | 35.0% | |
| GCCAAAACAATCATATCATC+TGG | + | chr4.3:23659220-23659239 | None:intergenic | 35.0% | |
| GGAATTAAGTAGACCTAGAA+TGG | + | chr4.3:23656265-23656284 | None:intergenic | 35.0% | |
| GGAATTACAAAAACCTTCTC+CGG | + | chr4.3:23656999-23657018 | None:intergenic | 35.0% | |
| GTATGATAGATGAGAACAGT+TGG | + | chr4.3:23658212-23658231 | None:intergenic | 35.0% | |
| GTCCAGTCTGTTCTAATAAA+AGG | - | chr4.3:23657838-23657857 | MS.gene32029:intron | 35.0% | |
| TCATACAAGTAAGGAGAACA+CGG | - | chr4.3:23656953-23656972 | MS.gene32029:CDS | 35.0% | |
| TGATTAAAGAATGGTCTCCA+TGG | + | chr4.3:23656678-23656697 | None:intergenic | 35.0% | |
| TGGCTTAAATGGCTTAAACT+TGG | + | chr4.3:23657039-23657058 | None:intergenic | 35.0% | |
| TGTAATTACCAATGATCAGG+TGG | - | chr4.3:23656578-23656597 | MS.gene32029:intron | 35.0% | |
| TTAGCTACATTTACCAACCA+AGG | + | chr4.3:23658718-23658737 | None:intergenic | 35.0% | |
| TTCTATTAGGCTCCTACATA+AGG | + | chr4.3:23657610-23657629 | None:intergenic | 35.0% | |
| TTTACCGATCATTCCTTGAA+TGG | - | chr4.3:23656849-23656868 | MS.gene32029:intron | 35.0% | |
| TTTGCTTATGTATCCTTGGT+TGG | - | chr4.3:23658702-23658721 | MS.gene32029:intron | 35.0% | |
| ! | AACTCTCATTTTCTTCCCTA+AGG | + | chr4.3:23656385-23656404 | None:intergenic | 35.0% |
| ! | ACCTTTTGCTTATGTATCCT+TGG | - | chr4.3:23658698-23658717 | MS.gene32029:intron | 35.0% |
| ! | CAAGGTTTTGCAATTTACCT+TGG | - | chr4.3:23656902-23656921 | MS.gene32029:intron | 35.0% |
| ! | CCTTTTCTTTTGCTTTCATC+AGG | - | chr4.3:23659350-23659369 | MS.gene32029:CDS | 35.0% |
| ! | CTTCTGATTTTCTGCATTGT+TGG | + | chr4.3:23660097-23660116 | None:intergenic | 35.0% |
| ! | CTTTTCAACACTTTGTCATG+AGG | - | chr4.3:23656788-23656807 | MS.gene32029:CDS | 35.0% |
| !! | ATTGTGTTGGTTCCTTATGT+AGG | - | chr4.3:23657595-23657614 | MS.gene32029:intron | 35.0% |
| !! | CTCATGACAAAGTGTTGAAA+AGG | + | chr4.3:23656790-23656809 | None:intergenic | 35.0% |
| !! | TGGAAGTATTCACATGAACA+AGG | - | chr4.3:23656884-23656903 | MS.gene32029:intron | 35.0% |
| !! | TTGGTTGGTAAATGTAGCTA+AGG | - | chr4.3:23658717-23658736 | MS.gene32029:intron | 35.0% |
| !! | TTTCTGGTCTTAGAGATATG+CGG | - | chr4.3:23658034-23658053 | MS.gene32029:intron | 35.0% |
| !!! | GATTTTTTCTATCCCAACGT+TGG | - | chr4.3:23656160-23656179 | MS.gene32029:CDS | 35.0% |
| !!! | TTGAATGGTTTTAGTGATGC+TGG | - | chr4.3:23656864-23656883 | MS.gene32029:intron | 35.0% |
| AACAGCAATAGGTGCTTTAG+AGG | + | chr4.3:23658516-23658535 | None:intergenic | 40.0% | |
| AACCAACACAATAGCAACAC+TGG | + | chr4.3:23657587-23657606 | None:intergenic | 40.0% | |
| AAGGAACTGTAACAGTGCAA+AGG | + | chr4.3:23658944-23658963 | None:intergenic | 40.0% | |
| AAGGCAAATCATTCCAAGAG+GGG | + | chr4.3:23657297-23657316 | None:intergenic | 40.0% | |
| AATTACCAATGATCAGGTGG+TGG | - | chr4.3:23656581-23656600 | MS.gene32029:intron | 40.0% | |
| ACAACTAGCAGCCTCTAATA+TGG | + | chr4.3:23658987-23659006 | None:intergenic | 40.0% | |
| AGAACCTGATCCAAGTGATA+TGG | - | chr4.3:23659240-23659259 | MS.gene32029:CDS | 40.0% | |
| ATAACAATTTCCGATCCGCT+AGG | + | chr4.3:23657101-23657120 | None:intergenic | 40.0% | |
| ATATTAGAGGCTGCTAGTTG+TGG | - | chr4.3:23658986-23659005 | MS.gene32029:intron | 40.0% | |
| ATCTACTTGAACGACTCTCA+CGG | - | chr4.3:23659493-23659512 | MS.gene32029:CDS | 40.0% | |
| ATCTTCATGCCATGTCATTC+AGG | + | chr4.3:23658448-23658467 | None:intergenic | 40.0% | |
| ATGCTTATGGAAAACGCTCT+GGG | - | chr4.3:23656613-23656632 | MS.gene32029:intron | 40.0% | |
| ATTAACTTATGGTCCCCTCT+TGG | - | chr4.3:23657281-23657300 | MS.gene32029:intron | 40.0% | |
| CAAGCTTCAGCCACTTAAAA+TGG | + | chr4.3:23658131-23658150 | None:intergenic | 40.0% | |
| CATTCTCTTCAAGATCGAGT+TGG | - | chr4.3:23657787-23657806 | MS.gene32029:intron | 40.0% | |
| CCATGATTCTAGCATGCATA+AGG | + | chr4.3:23656815-23656834 | None:intergenic | 40.0% | |
| CCATTCACACAATGTCAGTT+AGG | - | chr4.3:23658377-23658396 | MS.gene32029:CDS | 40.0% | |
| CCTAACTGACATTGTGTGAA+TGG | + | chr4.3:23658380-23658399 | None:intergenic | 40.0% | |
| CCTTATGCATGCTAGAATCA+TGG | - | chr4.3:23656812-23656831 | MS.gene32029:intron | 40.0% | |
| CGTTTCATTATTGGAGGTGA+TGG | - | chr4.3:23657727-23657746 | MS.gene32029:intron | 40.0% | |
| GAAAGAATTACCGTTGTGCA+TGG | - | chr4.3:23656756-23656775 | MS.gene32029:CDS | 40.0% | |
| GATTATCCAAACAGAGCCTT+AGG | - | chr4.3:23656366-23656385 | MS.gene32029:CDS | 40.0% | |
| GTGGTTGTAACTCATGCTTA+TGG | - | chr4.3:23656600-23656619 | MS.gene32029:intron | 40.0% | |
| TAAGCCATTTAAGCCAGTGT+CGG | - | chr4.3:23657043-23657062 | MS.gene32029:intron | 40.0% | |
| TATGGCGTATATTGGAGCTA+TGG | - | chr4.3:23659900-23659919 | MS.gene32029:intron | 40.0% | |
| TGCTAGAATCATGGGATACA+AGG | - | chr4.3:23656821-23656840 | MS.gene32029:intron | 40.0% | |
| TTAGCCTGCTGATGATATTG+AGG | - | chr4.3:23660010-23660029 | MS.gene32029:CDS | 40.0% | |
| ! | ATTTTGGACTACGGTCATGT+GGG | - | chr4.3:23659158-23659177 | MS.gene32029:CDS | 40.0% |
| ! | CATTTTTGCTTCGTCGTGTT+CGG | - | chr4.3:23659948-23659967 | MS.gene32029:intron | 40.0% |
| ! | GCCCTTTTATTAGAACAGAC+TGG | + | chr4.3:23657843-23657862 | None:intergenic | 40.0% |
| ! | TTCCAGTGTTGCTATTGTGT+TGG | - | chr4.3:23657582-23657601 | MS.gene32029:intron | 40.0% |
| ! | TTTTTCTATCCCAACGTTGG+TGG | - | chr4.3:23656163-23656182 | MS.gene32029:CDS | 40.0% |
| !! | AGTCGATTGGTTTACCGTAA+AGG | - | chr4.3:23657131-23657150 | MS.gene32029:intron | 40.0% |
| !! | CAAGATCGAGTTGGTTTGTT+GGG | - | chr4.3:23657796-23657815 | MS.gene32029:intron | 40.0% |
| !! | TATTTTGGACTACGGTCATG+TGG | - | chr4.3:23659157-23659176 | MS.gene32029:CDS | 40.0% |
| !! | TCAAGATCGAGTTGGTTTGT+TGG | - | chr4.3:23657795-23657814 | MS.gene32029:intron | 40.0% |
| !! | TGTTTTAGACACCTCTCTTG+CGG | - | chr4.3:23659827-23659846 | MS.gene32029:intron | 40.0% |
| !!! | TTGGCTTGTTTTGCATAACG+CGG | - | chr4.3:23657211-23657230 | MS.gene32029:CDS | 40.0% |
| AACGATGTTGCTCTCTGCAA+TGG | + | chr4.3:23657516-23657535 | None:intergenic | 45.0% | |
| ACATCCCTCCAAATCCATCA+CGG | + | chr4.3:23660064-23660083 | None:intergenic | 45.0% | |
| ACGGGGTTATTTGGGTGAAA+CGG | + | chr4.3:23658643-23658662 | None:intergenic | 45.0% | |
| ACTCGATTGTGCATGACTTG+AGG | + | chr4.3:23659310-23659329 | None:intergenic | 45.0% | |
| ACTGTAACAGTGCAAAGGTC+AGG | + | chr4.3:23658939-23658958 | None:intergenic | 45.0% | |
| AGATGAGGGAACTCTATAGC+TGG | - | chr4.3:23659409-23659428 | MS.gene32029:CDS | 45.0% | |
| CATGCTTATGGAAAACGCTC+TGG | - | chr4.3:23656612-23656631 | MS.gene32029:intron | 45.0% | |
| CTCACGGTACACACTTTGAT+AGG | - | chr4.3:23659509-23659528 | MS.gene32029:CDS | 45.0% | |
| CTTAAACAGGTTTGGCATCC+TGG | - | chr4.3:23657870-23657889 | MS.gene32029:intron | 45.0% | |
| GGTTTGATGTCCATGCACAA+CGG | + | chr4.3:23656769-23656788 | None:intergenic | 45.0% | |
| GTCTTTAGTGTCTACACTCG+AGG | + | chr4.3:23657680-23657699 | None:intergenic | 45.0% | |
| TAACAGTGCAAAGGTCAGGT+AGG | + | chr4.3:23658935-23658954 | None:intergenic | 45.0% | |
| TACAACCACCACCTGATCAT+TGG | + | chr4.3:23656589-23656608 | None:intergenic | 45.0% | |
| TCTCAATGCCTGCTCAACTT+AGG | - | chr4.3:23656211-23656230 | MS.gene32029:intron | 45.0% | |
| TGCTTATGGAAAACGCTCTG+GGG | - | chr4.3:23656614-23656633 | MS.gene32029:intron | 45.0% | |
| TTAACAGTTAGCACACGCGT+CGG | - | chr4.3:23659013-23659032 | MS.gene32029:intron | 45.0% | |
| TTCTTCCCTAAGGCTCTGTT+TGG | + | chr4.3:23656375-23656394 | None:intergenic | 45.0% | |
| TTGGCAGTGTCAACAGCATT+AGG | + | chr4.3:23657020-23657039 | None:intergenic | 45.0% | |
| TTGGGCGAGAGAATGAAATC+CGG | + | chr4.3:23660041-23660060 | None:intergenic | 45.0% | |
| ! | CTTTAGGGACCTGAATGACA+TGG | - | chr4.3:23658436-23658455 | MS.gene32029:CDS | 45.0% |
| ! | CTTTCTCTGTCAAGAAGCAC+CGG | + | chr4.3:23657329-23657348 | None:intergenic | 45.0% |
| ! | GATTTGCCTTTTTGTCCTGC+CGG | - | chr4.3:23657307-23657326 | MS.gene32029:intron | 45.0% |
| ! | GGCAGGAAAGATCTTTTGCT+TGG | - | chr4.3:23659856-23659875 | MS.gene32029:intron | 45.0% |
| ! | GTAAGGAGAACACGGTTTTG+AGG | - | chr4.3:23656961-23656980 | MS.gene32029:CDS | 45.0% |
| ! | TTTTGGACTACGGTCATGTG+GGG | - | chr4.3:23659159-23659178 | MS.gene32029:CDS | 45.0% |
| !! | GGGAGTGTTCCATACAAAGT+TGG | + | chr4.3:23656711-23656730 | None:intergenic | 45.0% |
| !! | GTGATGGACCTAAACGTGTA+CGG | - | chr4.3:23657743-23657762 | MS.gene32029:intron | 45.0% |
| ACAATTTCCGATCCGCTAGG+AGG | + | chr4.3:23657098-23657117 | None:intergenic | 50.0% | |
| ACAGGTTTGGCATCCTGGAA+AGG | - | chr4.3:23657875-23657894 | MS.gene32029:intron | 50.0% | |
| ACCTAAACGTGTACGGTTGG+AGG | - | chr4.3:23657750-23657769 | MS.gene32029:intron | 50.0% | |
| ATACTTGTGGTGCCTACCTC+AGG | + | chr4.3:23659046-23659065 | None:intergenic | 50.0% | |
| ATTCTCGACACCACCAACGT+TGG | + | chr4.3:23656176-23656195 | None:intergenic | 50.0% | |
| ATTGCGCGCACCATATCACT+TGG | + | chr4.3:23659253-23659272 | None:intergenic | 50.0% | |
| CCAGAGGTCATGCAACAAAC+TGG | + | chr4.3:23658608-23658627 | None:intergenic | 50.0% | |
| CCTCCAAATCCATCACGGTT+GGG | + | chr4.3:23660059-23660078 | None:intergenic | 50.0% | |
| CGCACCATATCACTTGGATC+AGG | + | chr4.3:23659247-23659266 | None:intergenic | 50.0% | |
| GCAGCATAGTTATCGCCTTC+TGG | + | chr4.3:23659276-23659295 | None:intergenic | 50.0% | |
| GCCTCCTCAATATCATCAGC+AGG | + | chr4.3:23660017-23660036 | None:intergenic | 50.0% | |
| GCCTGCTGATGATATTGAGG+AGG | - | chr4.3:23660013-23660032 | MS.gene32029:CDS | 50.0% | |
| GCGTATATTGGAGCTATGGC+AGG | - | chr4.3:23659904-23659923 | MS.gene32029:intron | 50.0% | |
| GCTGGCATGATGTTGCCAAA+AGG | - | chr4.3:23659427-23659446 | MS.gene32029:CDS | 50.0% | |
| GGATGCAATCGACACACTTC+TGG | + | chr4.3:23657182-23657201 | None:intergenic | 50.0% | |
| TACCTTGGCAGATGTGAGTC+AGG | - | chr4.3:23656917-23656936 | MS.gene32029:CDS | 50.0% | |
| TCCTCCAACCGTACACGTTT+AGG | + | chr4.3:23657754-23657773 | None:intergenic | 50.0% | |
| TGGACCTAAACGTGTACGGT+TGG | - | chr4.3:23657747-23657766 | MS.gene32029:intron | 50.0% | |
| TTCTCGACACCACCAACGTT+GGG | + | chr4.3:23656175-23656194 | None:intergenic | 50.0% | |
| ! | ATTTAAGCCAGTGTCGGAGG+CGG | - | chr4.3:23657049-23657068 | MS.gene32029:intron | 50.0% |
| ! | CAAGCAAGTCGGCTCCTTTA+CGG | + | chr4.3:23657148-23657167 | None:intergenic | 50.0% |
| ! | TCTGGGGTCAGATACATGAC+AGG | - | chr4.3:23656630-23656649 | MS.gene32029:intron | 50.0% |
| ! | TGATGATATTGAGGAGGCGC+CGG | - | chr4.3:23660019-23660038 | MS.gene32029:CDS | 50.0% |
| !! | AGTTGAGCAGGCATTGAGAG+AGG | + | chr4.3:23656210-23656229 | None:intergenic | 50.0% |
| !! | CCAACCGTGATGGATTTGGA+GGG | - | chr4.3:23660057-23660076 | MS.gene32029:CDS | 50.0% |
| !! | CCAGTTTGTTGCATGACCTC+TGG | - | chr4.3:23658605-23658624 | MS.gene32029:intron | 50.0% |
| !! | TGCATGACCTCTGGAGCAAA+GGG | - | chr4.3:23658614-23658633 | MS.gene32029:intron | 50.0% |
| !! | TTGCATGACCTCTGGAGCAA+AGG | - | chr4.3:23658613-23658632 | MS.gene32029:intron | 50.0% |
| !!! | GAGAACACGGTTTTGAGGTC+CGG | - | chr4.3:23656966-23656985 | MS.gene32029:CDS | 50.0% |
| ACACCTCTCTTGCGGAGCAT+GGG | - | chr4.3:23659835-23659854 | MS.gene32029:intron | 55.0% | |
| AGCCTGACTCACATCTGCCA+AGG | + | chr4.3:23656922-23656941 | None:intergenic | 55.0% | |
| ATTCTCTCGCCCAACCGTGA+TGG | - | chr4.3:23660047-23660066 | MS.gene32029:CDS | 55.0% | |
| CCCTCCAAATCCATCACGGT+TGG | + | chr4.3:23660060-23660079 | None:intergenic | 55.0% | |
| CCTGCTCAACTTAGGCCACA+AGG | - | chr4.3:23656219-23656238 | MS.gene32029:intron | 55.0% | |
| GGGGTCAGATACATGACAGG+TGG | - | chr4.3:23656633-23656652 | MS.gene32029:intron | 55.0% | |
| TATGGTGCGCGCAATCCAGA+AGG | - | chr4.3:23659258-23659277 | MS.gene32029:CDS | 55.0% | |
| ! | CCTTGTGGCCTAAGTTGAGC+AGG | + | chr4.3:23656222-23656241 | None:intergenic | 55.0% |
| ! | GCCATTTAAGCCAGTGTCGG+AGG | - | chr4.3:23657046-23657065 | MS.gene32029:intron | 55.0% |
| !! | CCCAACCGTGATGGATTTGG+AGG | - | chr4.3:23660056-23660075 | MS.gene32029:CDS | 55.0% |
| !! | GAAGCACCGGCAGGACAAAA+AGG | + | chr4.3:23657316-23657335 | None:intergenic | 55.0% |
| !! | GCATGACCTCTGGAGCAAAG+GGG | - | chr4.3:23658615-23658634 | MS.gene32029:intron | 55.0% |
| !! | GCCTCCGACACTGGCTTAAA+TGG | + | chr4.3:23657050-23657069 | None:intergenic | 55.0% |
| !! | TCGCCCAACCGTGATGGATT+TGG | - | chr4.3:23660053-23660072 | MS.gene32029:CDS | 55.0% |
| !!! | CACGGTTTTGAGGTCCGGTT+TGG | - | chr4.3:23656971-23656990 | MS.gene32029:CDS | 55.0% |
| AACCTTCTCCGGCGCCAAAC+CGG | + | chr4.3:23656988-23657007 | None:intergenic | 60.0% | |
| ACAGTTAGCACACGCGTCGG+AGG | - | chr4.3:23659016-23659035 | MS.gene32029:intron | 60.0% | |
| GACACCTCTCTTGCGGAGCA+TGG | - | chr4.3:23659834-23659853 | MS.gene32029:intron | 60.0% | |
| !! | CTCTGTCAAGAAGCACCGGC+AGG | + | chr4.3:23657325-23657344 | None:intergenic | 60.0% |
| !! | GTCGGAGGTGTTCCTGAGGT+AGG | - | chr4.3:23659031-23659050 | MS.gene32029:CDS | 60.0% |
| !! | TTTGAGGTCCGGTTTGGCGC+CGG | - | chr4.3:23656977-23656996 | MS.gene32029:CDS | 60.0% |
| ACGGTGCCCCTTTGCTCCAG+AGG | + | chr4.3:23658624-23658643 | None:intergenic | 65.0% | |
| CTCTCTTGCGGAGCATGGGC+AGG | - | chr4.3:23659839-23659858 | MS.gene32029:intron | 65.0% | |
| CTGCCCATGCTCCGCAAGAG+AGG | + | chr4.3:23659841-23659860 | None:intergenic | 65.0% | |
| ! | GGAGCGTCCTCCTAGCGGAT+CGG | - | chr4.3:23657088-23657107 | MS.gene32029:intron | 65.0% |
| ! | TAAGCCAGTGTCGGAGGCGG+AGG | - | chr4.3:23657052-23657071 | MS.gene32029:intron | 65.0% |
| !! | ACGCGTCGGAGGTGTTCCTG+AGG | - | chr4.3:23659027-23659046 | MS.gene32029:CDS | 65.0% |
| !! | GAGGAGGAGCGTCCTCCTAG+CGG | - | chr4.3:23657083-23657102 | MS.gene32029:intron | 65.0% |
| !! | GTCCGGTTTGGCGCCGGAGA+AGG | - | chr4.3:23656983-23657002 | MS.gene32029:CDS | 70.0% |
| TCCGCCTCCGCCTCCGACAC+TGG | + | chr4.3:23657059-23657078 | None:intergenic | 75.0% | |
| ! | AGTGTCGGAGGCGGAGGCGG+AGG | - | chr4.3:23657058-23657077 | MS.gene32029:intron | 75.0% |
| ! | GCCAGTGTCGGAGGCGGAGG+CGG | - | chr4.3:23657055-23657074 | MS.gene32029:intron | 75.0% |
| ! | GTCGGAGGCGGAGGCGGAGG+CGG | - | chr4.3:23657061-23657080 | MS.gene32029:intron | 80.0% |
| ! | GGAGGCGGAGGCGGAGGCGG+AGG | - | chr4.3:23657064-23657083 | MS.gene32029:intron | 85.0% |
| ! | GGCGGAGGCGGAGGCGGAGG+AGG | - | chr4.3:23657067-23657086 | MS.gene32029:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 23656109 | 23660121 | 23656109 | ID=MS.gene32029 |
| chr4.3 | mRNA | 23656109 | 23660121 | 23656109 | ID=MS.gene32029.t1;Parent=MS.gene32029 |
| chr4.3 | exon | 23659990 | 23660121 | 23659990 | ID=MS.gene32029.t1.exon1;Parent=MS.gene32029.t1 |
| chr4.3 | CDS | 23659990 | 23660121 | 23659990 | ID=cds.MS.gene32029.t1;Parent=MS.gene32029.t1 |
| chr4.3 | exon | 23659025 | 23659633 | 23659025 | ID=MS.gene32029.t1.exon2;Parent=MS.gene32029.t1 |
| chr4.3 | CDS | 23659025 | 23659633 | 23659025 | ID=cds.MS.gene32029.t1;Parent=MS.gene32029.t1 |
| chr4.3 | exon | 23658352 | 23658506 | 23658352 | ID=MS.gene32029.t1.exon3;Parent=MS.gene32029.t1 |
| chr4.3 | CDS | 23658352 | 23658506 | 23658352 | ID=cds.MS.gene32029.t1;Parent=MS.gene32029.t1 |
| chr4.3 | exon | 23657182 | 23657272 | 23657182 | ID=MS.gene32029.t1.exon4;Parent=MS.gene32029.t1 |
| chr4.3 | CDS | 23657182 | 23657272 | 23657182 | ID=cds.MS.gene32029.t1;Parent=MS.gene32029.t1 |
| chr4.3 | exon | 23656903 | 23657019 | 23656903 | ID=MS.gene32029.t1.exon5;Parent=MS.gene32029.t1 |
| chr4.3 | CDS | 23656903 | 23657019 | 23656903 | ID=cds.MS.gene32029.t1;Parent=MS.gene32029.t1 |
| chr4.3 | exon | 23656716 | 23656819 | 23656716 | ID=MS.gene32029.t1.exon6;Parent=MS.gene32029.t1 |
| chr4.3 | CDS | 23656716 | 23656819 | 23656716 | ID=cds.MS.gene32029.t1;Parent=MS.gene32029.t1 |
| chr4.3 | exon | 23656305 | 23656395 | 23656305 | ID=MS.gene32029.t1.exon7;Parent=MS.gene32029.t1 |
| chr4.3 | CDS | 23656305 | 23656395 | 23656305 | ID=cds.MS.gene32029.t1;Parent=MS.gene32029.t1 |
| chr4.3 | exon | 23656109 | 23656216 | 23656109 | ID=MS.gene32029.t1.exon8;Parent=MS.gene32029.t1 |
| chr4.3 | CDS | 23656109 | 23656216 | 23656109 | ID=cds.MS.gene32029.t1;Parent=MS.gene32029.t1 |
| Gene Sequence |
| Protein sequence |
