Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33718.t1 | XP_003604587.1 | 99.8 | 447 | 1 | 0 | 1 | 447 | 1 | 447 | 1.00E-258 | 902.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33718.t1 | O64937 | 94.6 | 447 | 24 | 0 | 1 | 447 | 1 | 447 | 6.7e-251 | 867.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33718.t1 | G7JLV1 | 99.8 | 447 | 1 | 0 | 1 | 447 | 1 | 447 | 7.3e-259 | 902.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049356 | MS.gene33718 | -0.830768 | 2.44E-55 | -1.69E-46 |
MS.gene052777 | MS.gene33718 | 0.965888 | 3.43E-125 | -1.69E-46 |
MS.gene053103 | MS.gene33718 | -0.80473 | 1.88E-49 | -1.69E-46 |
MS.gene053104 | MS.gene33718 | -0.813225 | 2.85E-51 | -1.69E-46 |
MS.gene055722 | MS.gene33718 | -0.802741 | 4.86E-49 | -1.69E-46 |
MS.gene056422 | MS.gene33718 | -0.814024 | 1.90E-51 | -1.69E-46 |
MS.gene056448 | MS.gene33718 | -0.84074 | 7.25E-58 | -1.69E-46 |
MS.gene057926 | MS.gene33718 | -0.821233 | 4.50E-53 | -1.69E-46 |
MS.gene058006 | MS.gene33718 | -0.813543 | 2.43E-51 | -1.69E-46 |
MS.gene059367 | MS.gene33718 | -0.810439 | 1.15E-50 | -1.69E-46 |
MS.gene059368 | MS.gene33718 | -0.813369 | 2.65E-51 | -1.69E-46 |
MS.gene059711 | MS.gene33718 | -0.842191 | 3.01E-58 | -1.69E-46 |
MS.gene060482 | MS.gene33718 | -0.829414 | 5.22E-55 | -1.69E-46 |
MS.gene060804 | MS.gene33718 | -0.821626 | 3.65E-53 | -1.69E-46 |
MS.gene060837 | MS.gene33718 | -0.859295 | 4.57E-63 | -1.69E-46 |
MS.gene061041 | MS.gene33718 | -0.800803 | 1.21E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33718.t1 | MTR_4g014810 | 99.776 | 447 | 1 | 0 | 1 | 447 | 1 | 447 | 0.0 | 919 |
MS.gene33718.t1 | MTR_1g495705 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 891 |
MS.gene33718.t1 | MTR_1g095650 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 891 |
MS.gene33718.t1 | MTR_1g095703 | 96.205 | 448 | 16 | 1 | 1 | 447 | 1 | 448 | 0.0 | 890 |
MS.gene33718.t1 | MTR_6g021800 | 96.083 | 434 | 17 | 0 | 1 | 434 | 1 | 434 | 0.0 | 874 |
MS.gene33718.t1 | MTR_6g021805 | 96.083 | 434 | 17 | 0 | 1 | 434 | 1 | 434 | 0.0 | 874 |
MS.gene33718.t1 | MTR_1g013680 | 95.195 | 437 | 18 | 1 | 1 | 434 | 1 | 437 | 0.0 | 857 |
MS.gene33718.t1 | MTR_1g085410 | 82.258 | 434 | 77 | 0 | 1 | 434 | 1 | 434 | 0.0 | 743 |
MS.gene33718.t1 | MTR_1g101870 | 80.963 | 436 | 78 | 3 | 1 | 436 | 1 | 431 | 0.0 | 731 |
MS.gene33718.t1 | MTR_1g101870 | 80.963 | 436 | 78 | 3 | 1 | 436 | 1 | 431 | 0.0 | 728 |
MS.gene33718.t1 | MTR_1g024175 | 78.802 | 434 | 92 | 0 | 1 | 434 | 1 | 434 | 0.0 | 726 |
MS.gene33718.t1 | MTR_8g014590 | 79.065 | 449 | 91 | 2 | 1 | 446 | 1 | 449 | 0.0 | 717 |
MS.gene33718.t1 | MTR_1g095650 | 95.389 | 347 | 15 | 1 | 102 | 447 | 1 | 347 | 0.0 | 682 |
MS.gene33718.t1 | MTR_2g082730 | 73.364 | 428 | 97 | 2 | 1 | 426 | 1 | 413 | 0.0 | 647 |
MS.gene33718.t1 | MTR_5g037350 | 67.377 | 469 | 116 | 1 | 3 | 434 | 13 | 481 | 0.0 | 634 |
MS.gene33718.t1 | MTR_1g089520 | 70.930 | 430 | 107 | 3 | 4 | 432 | 5 | 417 | 0.0 | 625 |
MS.gene33718.t1 | MTR_2g082665 | 68.224 | 428 | 93 | 2 | 1 | 426 | 1 | 387 | 0.0 | 590 |
MS.gene33718.t1 | MTR_2g037420 | 64.159 | 452 | 116 | 4 | 1 | 447 | 1 | 411 | 0.0 | 566 |
MS.gene33718.t1 | MTR_8g013910 | 64.286 | 448 | 125 | 5 | 1 | 432 | 1 | 429 | 0.0 | 555 |
MS.gene33718.t1 | MTR_2g080210 | 63.453 | 446 | 121 | 5 | 1 | 443 | 1 | 407 | 0.0 | 551 |
MS.gene33718.t1 | MTR_8g008740 | 78.154 | 325 | 70 | 1 | 1 | 324 | 1 | 325 | 0.0 | 540 |
MS.gene33718.t1 | MTR_1g112460 | 64.765 | 298 | 63 | 4 | 155 | 446 | 1 | 262 | 6.55e-124 | 361 |
MS.gene33718.t1 | MTR_1g495735 | 74.627 | 201 | 41 | 1 | 240 | 430 | 106 | 306 | 2.31e-99 | 300 |
MS.gene33718.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 4.76e-17 | 82.0 |
MS.gene33718.t1 | MTR_6g080420 | 38.173 | 427 | 256 | 5 | 5 | 426 | 89 | 512 | 1.39e-98 | 305 |
MS.gene33718.t1 | MTR_8g106700 | 37.939 | 427 | 255 | 6 | 4 | 424 | 43 | 465 | 9.44e-95 | 293 |
MS.gene33718.t1 | MTR_8g106700 | 37.939 | 427 | 255 | 6 | 4 | 424 | 49 | 471 | 1.17e-94 | 293 |
MS.gene33718.t1 | MTR_8g106700 | 37.939 | 427 | 255 | 6 | 4 | 424 | 70 | 492 | 3.41e-94 | 293 |
MS.gene33718.t1 | MTR_8g087950 | 36.000 | 425 | 264 | 5 | 7 | 426 | 275 | 696 | 1.71e-90 | 289 |
MS.gene33718.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 6.54e-90 | 274 |
MS.gene33718.t1 | MTR_8g087950 | 35.748 | 428 | 267 | 5 | 7 | 429 | 348 | 772 | 8.85e-90 | 289 |
MS.gene33718.t1 | MTR_4g054970 | 56.612 | 242 | 76 | 4 | 193 | 431 | 50 | 265 | 4.45e-81 | 252 |
MS.gene33718.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.02e-13 | 69.3 |
MS.gene33718.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.11e-78 | 241 |
MS.gene33718.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.50e-47 | 159 |
MS.gene33718.t1 | MTR_7g094460 | 30.137 | 438 | 246 | 14 | 3 | 429 | 59 | 447 | 6.75e-45 | 162 |
MS.gene33718.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 4.43e-43 | 157 |
MS.gene33718.t1 | MTR_7g098190 | 53.293 | 167 | 52 | 5 | 56 | 220 | 10 | 152 | 1.16e-42 | 149 |
MS.gene33718.t1 | MTR_3g076660 | 29.730 | 444 | 251 | 15 | 3 | 429 | 88 | 487 | 1.13e-39 | 149 |
MS.gene33718.t1 | MTR_8g014960 | 73.239 | 71 | 19 | 0 | 213 | 283 | 2 | 72 | 3.11e-29 | 113 |
MS.gene33718.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 5.92e-13 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33718.t1 | AT5G60390 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT5G60390 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT5G60390 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT1G07920 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT1G07940 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT1G07940 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT1G07940 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT1G07940 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT1G07930 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
MS.gene33718.t1 | AT1G07930 | 98.039 | 255 | 5 | 0 | 1 | 255 | 1 | 255 | 0.0 | 528 |
MS.gene33718.t1 | AT1G07930 | 86.207 | 116 | 16 | 0 | 331 | 446 | 254 | 369 | 1.65e-64 | 212 |
MS.gene33718.t1 | AT1G18070 | 37.176 | 425 | 259 | 5 | 5 | 424 | 99 | 520 | 2.79e-95 | 297 |
MS.gene33718.t1 | AT1G18070 | 37.176 | 425 | 259 | 5 | 5 | 424 | 99 | 520 | 2.79e-95 | 297 |
MS.gene33718.t1 | AT1G18070 | 36.468 | 436 | 258 | 6 | 5 | 424 | 99 | 531 | 3.24e-92 | 289 |
MS.gene33718.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 239 | 660 | 7.61e-91 | 289 |
MS.gene33718.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 7.79e-91 | 289 |
MS.gene33718.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 7.79e-91 | 289 |
MS.gene33718.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 310 | 731 | 2.86e-90 | 290 |
MS.gene33718.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 315 | 736 | 3.76e-90 | 289 |
MS.gene33718.t1 | AT1G35550 | 75.962 | 104 | 25 | 0 | 335 | 438 | 1 | 104 | 2.33e-51 | 169 |
MS.gene33718.t1 | AT4G20360 | 30.575 | 435 | 253 | 10 | 3 | 426 | 75 | 471 | 3.00e-44 | 161 |
MS.gene33718.t1 | AT4G20360 | 30.575 | 435 | 253 | 10 | 3 | 426 | 75 | 471 | 3.00e-44 | 161 |
MS.gene33718.t1 | AT4G02930 | 29.841 | 439 | 247 | 15 | 3 | 429 | 63 | 452 | 4.43e-43 | 157 |
MS.gene33718.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 4.32e-12 | 68.6 |
MS.gene33718.t1 | AT5G39900 | 25.839 | 298 | 158 | 8 | 4 | 288 | 64 | 311 | 6.54e-12 | 68.2 |
MS.gene33718.t1 | AT5G08650 | 26.518 | 313 | 172 | 13 | 9 | 311 | 88 | 352 | 1.16e-11 | 67.4 |
MS.gene33718.t1 | AT5G08650 | 26.518 | 313 | 172 | 13 | 9 | 311 | 88 | 352 | 1.23e-11 | 67.4 |
MS.gene33718.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 5.55e-11 | 65.1 |
Find 134 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCACGGTTCATTTCTTCT+TGG | 0.216911 | 4.3:-83668042 | None:intergenic |
GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 4.3:+83667020 | MS.gene33718:CDS |
ATCTCCATTCTTCAGGAACT+TGG | 0.311336 | 4.3:-83667847 | None:intergenic |
GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 4.3:+83667432 | MS.gene33718:CDS |
AAGTTAGCAGCCTCCTTGGC+TGG | 0.316454 | 4.3:-83667672 | None:intergenic |
CACATTAACATTGTTGTCAT+TGG | 0.329838 | 4.3:+83666630 | MS.gene33718:CDS |
TTCATTAAGAACATGATTAC+TGG | 0.336870 | 4.3:+83666903 | MS.gene33718:CDS |
TCTCTCACTGAGGCACTTCC+CGG | 0.352595 | 4.3:+83667567 | MS.gene33718:CDS |
TACCAGCATCTCCATTCTTC+AGG | 0.357413 | 4.3:-83667854 | None:intergenic |
CTCCTTGGCTGGGTCATCCT+TGG | 0.371796 | 4.3:-83667661 | None:intergenic |
GCAAAAGTCACCACCATTCC+AGG | 0.373840 | 4.3:-83667495 | None:intergenic |
ACTAAGATTGACAGGCGTTC+TGG | 0.379305 | 4.3:+83667804 | MS.gene33718:CDS |
TGCGTCAAACTGTGGCTGTT+GGG | 0.385555 | 4.3:+83667961 | MS.gene33718:CDS |
GTCATTGGCCATGTCGACTC+TGG | 0.395247 | 4.3:+83666645 | MS.gene33718:CDS |
CACCACCATTCCAGGTTTCA+TGG | 0.400023 | 4.3:-83667487 | None:intergenic |
ATTCCATTCGTTCCCATCTC+TGG | 0.404373 | 4.3:+83667273 | MS.gene33718:CDS |
ATACCTGCTCTTGGAATACT+TGG | 0.419677 | 4.3:-83667190 | None:intergenic |
AAGGACAATGGGTAAGGAAA+AGG | 0.424225 | 4.3:+83666605 | None:intergenic |
ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 4.3:+83667714 | MS.gene33718:CDS |
TTCACGGGTCTGACCATCCT+TGG | 0.425447 | 4.3:-83666994 | None:intergenic |
CTCATCATTGACTCCACTAC+TGG | 0.425797 | 4.3:+83666951 | MS.gene33718:CDS |
ATAGCCAACCTTCTTCATAT+AGG | 0.426065 | 4.3:-83667238 | None:intergenic |
CTTAATGAAATCCCTGTGTC+CGG | 0.429384 | 4.3:-83666889 | None:intergenic |
AATTTCATCATACCTGCTCT+TGG | 0.430266 | 4.3:-83667199 | None:intergenic |
GGCTTGTCTGATGGCCTCTT+AGG | 0.432559 | 4.3:-83667387 | None:intergenic |
CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 4.3:+83667720 | MS.gene33718:CDS |
GCCCCTCCGACTACCACTTC+AGG | 0.433104 | 4.3:+83667407 | MS.gene33718:CDS |
GAGGTGTGGCAGTCAAGCAC+AGG | 0.434332 | 4.3:-83667750 | None:intergenic |
GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 4.3:-83667728 | None:intergenic |
AGCGTTCATTCAAGTATGCT+TGG | 0.450783 | 4.3:+83666763 | MS.gene33718:CDS |
TGTGGCTGTTGGGGTTATCA+AGG | 0.455009 | 4.3:+83667971 | MS.gene33718:CDS |
CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 4.3:+83667423 | MS.gene33718:CDS |
TTAGTTATCTTAACAGTGCC+AGG | 0.458448 | 4.3:-83668011 | None:intergenic |
GCGTTCATTCAAGTATGCTT+GGG | 0.461276 | 4.3:+83666764 | MS.gene33718:CDS |
AGTCTCAACAACCATGGGCT+TGG | 0.462350 | 4.3:-83667895 | None:intergenic |
CTCAACAACCATGGGCTTGG+TGG | 0.464097 | 4.3:-83667892 | None:intergenic |
TTAATGAAATCCCTGTGTCC+GGG | 0.473933 | 4.3:-83666888 | None:intergenic |
TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 4.3:-83667723 | None:intergenic |
ATCAAATCAATGAGCCTAAG+AGG | 0.476814 | 4.3:+83667373 | MS.gene33718:CDS |
TGTGAAGTTAGCAGCCTCCT+TGG | 0.480074 | 4.3:-83667676 | None:intergenic |
TACAAATCTTGACTGGTACA+AGG | 0.490199 | 4.3:+83667326 | MS.gene33718:CDS |
GAGCCCAAGTTCCTGAAGAA+TGG | 0.491587 | 4.3:+83667843 | MS.gene33718:CDS |
AGTCGGAGGGGCTTGTCTGA+TGG | 0.496444 | 4.3:-83667396 | None:intergenic |
ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 4.3:-83667286 | None:intergenic |
GATTGACAGGCGTTCTGGTA+AGG | 0.497183 | 4.3:+83667809 | MS.gene33718:CDS |
AGCTTGTTACTAAGATTGAC+AGG | 0.504274 | 4.3:+83667796 | MS.gene33718:CDS |
TGGGTCATCCTTGGTGTTTG+AGG | 0.504620 | 4.3:-83667652 | None:intergenic |
CTTGGAATACTTGGGTGTAG+TGG | 0.514389 | 4.3:-83667181 | None:intergenic |
TGAGAACAGCACAATCAGCT+TGG | 0.516820 | 4.3:-83666932 | None:intergenic |
GAGAACAGCACAATCAGCTT+GGG | 0.517298 | 4.3:-83666931 | None:intergenic |
TATCAAGGGTGTGGAGAAGA+AGG | 0.517386 | 4.3:+83667986 | MS.gene33718:CDS |
ACTTCAGTTTGCAGTCCAGT+TGG | 0.517541 | 4.3:-83667519 | None:intergenic |
CAAGAGCCTCAAGAAGTGTT+GGG | 0.518886 | 4.3:-83667350 | None:intergenic |
ATTAAATCCCACATTGTCAC+CGG | 0.519224 | 4.3:-83667586 | None:intergenic |
TGTTAAGAATGTTTCTGTCA+AGG | 0.521267 | 4.3:+83667608 | MS.gene33718:CDS |
CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 4.3:+83667426 | MS.gene33718:CDS |
TCTCCATTCTTCAGGAACTT+GGG | 0.527363 | 4.3:-83667846 | None:intergenic |
TTGCTTTCACTCTTGGTGTG+AGG | 0.528420 | 4.3:+83667027 | MS.gene33718:CDS |
TTCCTGAAGAATGGAGATGC+TGG | 0.528428 | 4.3:+83667852 | MS.gene33718:CDS |
AGTTTCATCCTATATGAAGA+AGG | 0.530606 | 4.3:+83667230 | MS.gene33718:CDS |
TCAAGAGCCTCAAGAAGTGT+TGG | 0.532468 | 4.3:-83667351 | None:intergenic |
CTCAAGGCTGAGCGTGAAAG+AGG | 0.533500 | 4.3:+83666798 | MS.gene33718:CDS |
AGTTAGCAGCCTCCTTGGCT+GGG | 0.535132 | 4.3:-83667671 | None:intergenic |
TCATTGGCCATGTCGACTCT+GGG | 0.536467 | 4.3:+83666646 | MS.gene33718:CDS |
AGCAAACTTGACAGCAATGT+GGG | 0.541075 | 4.3:-83667772 | None:intergenic |
CCAGTCTCAACACGTCCGAC+AGG | 0.541163 | 4.3:-83667462 | None:intergenic |
CCTGTCGGACGTGTTGAGAC+TGG | 0.541718 | 4.3:+83667462 | MS.gene33718:CDS |
AGCTTCAAAACCACCAGTAG+TGG | 0.543721 | 4.3:-83666964 | None:intergenic |
TTCTCTGAATATCCTCCACT+TGG | 0.543785 | 4.3:+83667918 | MS.gene33718:CDS |
AGGTGTGGCAGTCAAGCACA+GGG | 0.544526 | 4.3:-83667749 | None:intergenic |
TGCACTGTCATTGATGCCCC+CGG | 0.544718 | 4.3:+83666870 | MS.gene33718:CDS |
TCATCCTATATGAAGAAGGT+TGG | 0.544820 | 4.3:+83667234 | MS.gene33718:CDS |
CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 4.3:+83666687 | MS.gene33718:CDS |
ATCATTGACTCCACTACTGG+TGG | 0.550177 | 4.3:+83666954 | MS.gene33718:CDS |
GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 4.3:+83666684 | MS.gene33718:CDS |
ATGCGTCAAACTGTGGCTGT+TGG | 0.557227 | 4.3:+83667960 | MS.gene33718:CDS |
GAAGCTGGTATTTCCAAGGA+TGG | 0.557613 | 4.3:+83666981 | MS.gene33718:CDS |
TCAACAACCATGGGCTTGGT+GGG | 0.557624 | 4.3:-83667891 | None:intergenic |
AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 4.3:-83667010 | None:intergenic |
TGTTGGGGTTATCAAGGGTG+TGG | 0.563472 | 4.3:+83667977 | MS.gene33718:CDS |
GCATATCTCTGACAGCAAAA+CGG | 0.563498 | 4.3:-83667941 | None:intergenic |
ACAAATCTTGACTGGTACAA+GGG | 0.563768 | 4.3:+83667327 | MS.gene33718:CDS |
GTGGCTGTTGGGGTTATCAA+GGG | 0.565604 | 4.3:+83667972 | MS.gene33718:CDS |
CAGGTATGATGAAATTGTGA+AGG | 0.569288 | 4.3:+83667206 | MS.gene33718:CDS |
TCTGGGAAGTCAACTACCAC+TGG | 0.570179 | 4.3:+83666663 | MS.gene33718:CDS |
TAATGAAATCCCTGTGTCCG+GGG | 0.570266 | 4.3:-83666887 | None:intergenic |
CACCCAAGTATTCCAAGAGC+AGG | 0.570501 | 4.3:+83667187 | MS.gene33718:CDS |
TTGGGTTCTTGACAAGCTCA+AGG | 0.572280 | 4.3:+83666782 | MS.gene33718:CDS |
AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 4.3:-83667009 | None:intergenic |
ATCCTGAAGTGGTAGTCGGA+GGG | 0.576252 | 4.3:-83667409 | None:intergenic |
GATGATTCCCACCAAGCCCA+TGG | 0.580619 | 4.3:+83667884 | MS.gene33718:CDS |
AAACCAGAGATGGGAACGAA+TGG | 0.584939 | 4.3:-83667276 | None:intergenic |
GCGTCAAACTGTGGCTGTTG+GGG | 0.590275 | 4.3:+83667962 | MS.gene33718:CDS |
CACCAAGGATGACCCAGCCA+AGG | 0.594197 | 4.3:+83667659 | MS.gene33718:CDS |
GAGAAAGTCTCAACAACCAT+GGG | 0.598729 | 4.3:-83667900 | None:intergenic |
TTGACTTCCCAGAGTCGACA+TGG | 0.600770 | 4.3:-83666653 | None:intergenic |
TTGACAAGCGTGTGATCGAG+AGG | 0.602725 | 4.3:+83666712 | MS.gene33718:CDS |
GGCACTTCCCGGTGACAATG+TGG | 0.604709 | 4.3:+83667578 | MS.gene33718:CDS |
TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 4.3:-83667285 | None:intergenic |
TCCTGAAGTGGTAGTCGGAG+GGG | 0.608492 | 4.3:-83667408 | None:intergenic |
AGCGCTCTACAAATCTTGAC+TGG | 0.610562 | 4.3:+83667319 | MS.gene33718:CDS |
GGTGTGGAGAAGAAGGAACC+TGG | 0.612825 | 4.3:+83667993 | MS.gene33718:CDS |
AGAGAAAGTCTCAACAACCA+TGG | 0.614767 | 4.3:-83667901 | None:intergenic |
GCACTTCCCGGTGACAATGT+GGG | 0.616830 | 4.3:+83667579 | MS.gene33718:CDS |
GCAAACTGAAGTCAAGTCTG+TGG | 0.619692 | 4.3:+83667530 | MS.gene33718:CDS |
TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 4.3:-83667025 | None:intergenic |
ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 4.3:-83667420 | None:intergenic |
CAAGGGCCCAACACTTCTTG+AGG | 0.622743 | 4.3:+83667344 | MS.gene33718:CDS |
AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 4.3:-83667722 | None:intergenic |
ACAGCAAAACGGCCAAGTGG+AGG | 0.624787 | 4.3:-83667930 | None:intergenic |
TACCTGCTCTTGGAATACTT+GGG | 0.632334 | 4.3:-83667189 | None:intergenic |
GGAATTGGAACTGTTCCTGT+CGG | 0.634263 | 4.3:+83667447 | MS.gene33718:CDS |
CATCCTGAAGTGGTAGTCGG+AGG | 0.637451 | 4.3:-83667410 | None:intergenic |
AGACATCCTGAAGTGGTAGT+CGG | 0.638051 | 4.3:-83667413 | None:intergenic |
CAGCAAACTTGACAGCAATG+TGG | 0.638328 | 4.3:-83667773 | None:intergenic |
GAGACTGGTACCATGAAACC+TGG | 0.643102 | 4.3:+83667477 | MS.gene33718:CDS |
AATGATCTGCTGCTGCAACA+AGG | 0.643325 | 4.3:+83667052 | MS.gene33718:CDS |
TGACAGCAATGTGGGAGGTG+TGG | 0.650950 | 4.3:-83667764 | None:intergenic |
AATGAAATCCCTGTGTCCGG+GGG | 0.661737 | 4.3:-83666886 | None:intergenic |
TCTGTCAAGGATCTCAAGCG+TGG | 0.663761 | 4.3:+83667621 | MS.gene33718:CDS |
TTAAATCCCACATTGTCACC+GGG | 0.665158 | 4.3:-83667585 | None:intergenic |
CAGAGATATGCGTCAAACTG+TGG | 0.666313 | 4.3:+83667953 | MS.gene33718:CDS |
CAAGGATGACCCAGCCAAGG+AGG | 0.668893 | 4.3:+83667662 | MS.gene33718:CDS |
TTCTGGTAAGGAGATCGAGA+AGG | 0.668930 | 4.3:+83667821 | MS.gene33718:CDS |
CTGACAGCAAAACGGCCAAG+TGG | 0.679918 | 4.3:-83667933 | None:intergenic |
GTGATTATCATGAATCACCC+TGG | 0.681230 | 4.3:+83667705 | MS.gene33718:CDS |
TACCATGAAACCTGGAATGG+TGG | 0.682936 | 4.3:+83667485 | MS.gene33718:CDS |
CTTGTAGATCAAGTGACCAG+TGG | 0.695213 | 4.3:-83666679 | None:intergenic |
AAACTTGACAGCAATGTGGG+AGG | 0.695398 | 4.3:-83667769 | None:intergenic |
TCACAATTGACATTGCTCTG+TGG | 0.708352 | 4.3:+83666823 | MS.gene33718:CDS |
TGGTACCATGAAACCTGGAA+TGG | 0.712415 | 4.3:+83667482 | MS.gene33718:CDS |
GGTGTGGCAGTCAAGCACAG+GGG | 0.731105 | 4.3:-83667748 | None:intergenic |
TTATGTTGCCTCAAACACCA+AGG | 0.751394 | 4.3:+83667644 | MS.gene33718:CDS |
GCATCATGAATCTCTCACTG+AGG | 0.754777 | 4.3:+83667557 | MS.gene33718:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATCTAATGCAACTAAAT+AGG | - | chr4.3:83667106-83667125 | None:intergenic | 20.0% |
!! | TAATCTAATGCAACTAAATA+GGG | - | chr4.3:83667105-83667124 | None:intergenic | 20.0% |
! | AATCTAATGCAACTAAATAG+GGG | - | chr4.3:83667104-83667123 | None:intergenic | 25.0% |
! | TTCATTAAGAACATGATTAC+TGG | + | chr4.3:83666903-83666922 | MS.gene33718:CDS | 25.0% |
!! | TTTTTGATATCTTGAACAGA+TGG | + | chr4.3:83667155-83667174 | MS.gene33718:intron | 25.0% |
AGTTTCATCCTATATGAAGA+AGG | + | chr4.3:83667230-83667249 | MS.gene33718:CDS | 30.0% | |
CACATTAACATTGTTGTCAT+TGG | + | chr4.3:83666630-83666649 | MS.gene33718:CDS | 30.0% | |
! | GAACGAATGGAATTTTATCT+GGG | - | chr4.3:83667266-83667285 | None:intergenic | 30.0% |
! | TGTTAAGAATGTTTCTGTCA+AGG | + | chr4.3:83667608-83667627 | MS.gene33718:CDS | 30.0% |
AATTTCATCATACCTGCTCT+TGG | - | chr4.3:83667202-83667221 | None:intergenic | 35.0% | |
ACAAATCTTGACTGGTACAA+GGG | + | chr4.3:83667327-83667346 | MS.gene33718:CDS | 35.0% | |
ATAGCCAACCTTCTTCATAT+AGG | - | chr4.3:83667241-83667260 | None:intergenic | 35.0% | |
ATCAAATCAATGAGCCTAAG+AGG | + | chr4.3:83667373-83667392 | MS.gene33718:CDS | 35.0% | |
ATTAAATCCCACATTGTCAC+CGG | - | chr4.3:83667589-83667608 | None:intergenic | 35.0% | |
CAGGTATGATGAAATTGTGA+AGG | + | chr4.3:83667206-83667225 | MS.gene33718:CDS | 35.0% | |
TACAAATCTTGACTGGTACA+AGG | + | chr4.3:83667326-83667345 | MS.gene33718:CDS | 35.0% | |
TCATCCTATATGAAGAAGGT+TGG | + | chr4.3:83667234-83667253 | MS.gene33718:CDS | 35.0% | |
TTAGTTATCTTAACAGTGCC+AGG | - | chr4.3:83668014-83668033 | None:intergenic | 35.0% | |
! | GGAACGAATGGAATTTTATC+TGG | - | chr4.3:83667267-83667286 | None:intergenic | 35.0% |
!! | AGCTTGTTACTAAGATTGAC+AGG | + | chr4.3:83667796-83667815 | MS.gene33718:CDS | 35.0% |
!!! | TTTTGAAGCTGGTATTTCCA+AGG | + | chr4.3:83666977-83666996 | MS.gene33718:CDS | 35.0% |
AGAGAAAGTCTCAACAACCA+TGG | - | chr4.3:83667904-83667923 | None:intergenic | 40.0% | |
AGCAAACTTGACAGCAATGT+GGG | - | chr4.3:83667775-83667794 | None:intergenic | 40.0% | |
AGCGTTCATTCAAGTATGCT+TGG | + | chr4.3:83666763-83666782 | MS.gene33718:CDS | 40.0% | |
ATACCTGCTCTTGGAATACT+TGG | - | chr4.3:83667193-83667212 | None:intergenic | 40.0% | |
ATCTCCATTCTTCAGGAACT+TGG | - | chr4.3:83667850-83667869 | None:intergenic | 40.0% | |
ATCTTGTAGACATCCTGAAG+TGG | - | chr4.3:83667423-83667442 | None:intergenic | 40.0% | |
CTTAATGAAATCCCTGTGTC+CGG | - | chr4.3:83666892-83666911 | None:intergenic | 40.0% | |
CTTCAGGATGTCTACAAGAT+TGG | + | chr4.3:83667423-83667442 | MS.gene33718:CDS | 40.0% | |
GAGAAAGTCTCAACAACCAT+GGG | - | chr4.3:83667903-83667922 | None:intergenic | 40.0% | |
GCATATCTCTGACAGCAAAA+CGG | - | chr4.3:83667944-83667963 | None:intergenic | 40.0% | |
GCGTTCATTCAAGTATGCTT+GGG | + | chr4.3:83666764-83666783 | MS.gene33718:CDS | 40.0% | |
GTCTACAAGATTGGAGGAAT+TGG | + | chr4.3:83667432-83667451 | MS.gene33718:CDS | 40.0% | |
GTGATTATCATGAATCACCC+TGG | + | chr4.3:83667705-83667724 | MS.gene33718:CDS | 40.0% | |
TACCTGCTCTTGGAATACTT+GGG | - | chr4.3:83667192-83667211 | None:intergenic | 40.0% | |
TCACAATTGACATTGCTCTG+TGG | + | chr4.3:83666823-83666842 | MS.gene33718:CDS | 40.0% | |
TCTCCATTCTTCAGGAACTT+GGG | - | chr4.3:83667849-83667868 | None:intergenic | 40.0% | |
TTAAATCCCACATTGTCACC+GGG | - | chr4.3:83667588-83667607 | None:intergenic | 40.0% | |
TTAATGAAATCCCTGTGTCC+GGG | - | chr4.3:83666891-83666910 | None:intergenic | 40.0% | |
TTATGTTGCCTCAAACACCA+AGG | + | chr4.3:83667644-83667663 | MS.gene33718:CDS | 40.0% | |
TTCTCTGAATATCCTCCACT+TGG | + | chr4.3:83667918-83667937 | MS.gene33718:CDS | 40.0% | |
AAACCAGAGATGGGAACGAA+TGG | - | chr4.3:83667279-83667298 | None:intergenic | 45.0% | |
AAACTTGACAGCAATGTGGG+AGG | - | chr4.3:83667772-83667791 | None:intergenic | 45.0% | |
AATGATCTGCTGCTGCAACA+AGG | + | chr4.3:83667052-83667071 | MS.gene33718:CDS | 45.0% | |
ACTAAGATTGACAGGCGTTC+TGG | + | chr4.3:83667804-83667823 | MS.gene33718:CDS | 45.0% | |
ACTTCAGTTTGCAGTCCAGT+TGG | - | chr4.3:83667522-83667541 | None:intergenic | 45.0% | |
AGACATCCTGAAGTGGTAGT+CGG | - | chr4.3:83667416-83667435 | None:intergenic | 45.0% | |
AGCGCTCTACAAATCTTGAC+TGG | + | chr4.3:83667319-83667338 | MS.gene33718:CDS | 45.0% | |
AGCTTCAAAACCACCAGTAG+TGG | - | chr4.3:83666967-83666986 | None:intergenic | 45.0% | |
ATCTCCCTCAAAACCAGAGA+TGG | - | chr4.3:83667289-83667308 | None:intergenic | 45.0% | |
ATTCCATTCGTTCCCATCTC+TGG | + | chr4.3:83667273-83667292 | MS.gene33718:CDS | 45.0% | |
CACTTGATCTACAAGCTTGG+AGG | + | chr4.3:83666687-83666706 | MS.gene33718:CDS | 45.0% | |
CAGAGATATGCGTCAAACTG+TGG | + | chr4.3:83667953-83667972 | MS.gene33718:CDS | 45.0% | |
CAGCAAACTTGACAGCAATG+TGG | - | chr4.3:83667776-83667795 | None:intergenic | 45.0% | |
CAGGATGTCTACAAGATTGG+AGG | + | chr4.3:83667426-83667445 | MS.gene33718:CDS | 45.0% | |
CTTGGAATACTTGGGTGTAG+TGG | - | chr4.3:83667184-83667203 | None:intergenic | 45.0% | |
CTTGTAGATCAAGTGACCAG+TGG | - | chr4.3:83666682-83666701 | None:intergenic | 45.0% | |
GAAGCTGGTATTTCCAAGGA+TGG | + | chr4.3:83666981-83667000 | MS.gene33718:CDS | 45.0% | |
GAGAACAGCACAATCAGCTT+GGG | - | chr4.3:83666934-83666953 | None:intergenic | 45.0% | |
GCAAACTGAAGTCAAGTCTG+TGG | + | chr4.3:83667530-83667549 | MS.gene33718:CDS | 45.0% | |
GCATCATGAATCTCTCACTG+AGG | + | chr4.3:83667557-83667576 | MS.gene33718:CDS | 45.0% | |
GGAATTGGAACTGTTCCTGT+CGG | + | chr4.3:83667447-83667466 | MS.gene33718:CDS | 45.0% | |
GGTCACTTGATCTACAAGCT+TGG | + | chr4.3:83666684-83666703 | MS.gene33718:CDS | 45.0% | |
TAATGAAATCCCTGTGTCCG+GGG | - | chr4.3:83666890-83666909 | None:intergenic | 45.0% | |
TACCAGCATCTCCATTCTTC+AGG | - | chr4.3:83667857-83667876 | None:intergenic | 45.0% | |
TACCATGAAACCTGGAATGG+TGG | + | chr4.3:83667485-83667504 | MS.gene33718:CDS | 45.0% | |
TCACACCAAGAGTGAAAGCA+AGG | - | chr4.3:83667028-83667047 | None:intergenic | 45.0% | |
TCTCCCTCAAAACCAGAGAT+GGG | - | chr4.3:83667288-83667307 | None:intergenic | 45.0% | |
TGAGAACAGCACAATCAGCT+TGG | - | chr4.3:83666935-83666954 | None:intergenic | 45.0% | |
TGGTACCATGAAACCTGGAA+TGG | + | chr4.3:83667482-83667501 | MS.gene33718:CDS | 45.0% | |
TTCCTGAAGAATGGAGATGC+TGG | + | chr4.3:83667852-83667871 | MS.gene33718:CDS | 45.0% | |
TTCTGGTAAGGAGATCGAGA+AGG | + | chr4.3:83667821-83667840 | MS.gene33718:CDS | 45.0% | |
TTGGGTTCTTGACAAGCTCA+AGG | + | chr4.3:83666782-83666801 | MS.gene33718:CDS | 45.0% | |
! | AAGCAAGGAGAGCATGTTCA+CGG | - | chr4.3:83667013-83667032 | None:intergenic | 45.0% |
! | TATCAAGGGTGTGGAGAAGA+AGG | + | chr4.3:83667986-83668005 | MS.gene33718:CDS | 45.0% |
! | TCAAGAGCCTCAAGAAGTGT+TGG | - | chr4.3:83667354-83667373 | None:intergenic | 45.0% |
! | TTGCTTTCACTCTTGGTGTG+AGG | + | chr4.3:83667027-83667046 | MS.gene33718:CDS | 45.0% |
!! | ATCATTGACTCCACTACTGG+TGG | + | chr4.3:83666954-83666973 | MS.gene33718:CDS | 45.0% |
!! | CAAGAGCCTCAAGAAGTGTT+GGG | - | chr4.3:83667353-83667372 | None:intergenic | 45.0% |
!! | CTCATCATTGACTCCACTAC+TGG | + | chr4.3:83666951-83666970 | MS.gene33718:CDS | 45.0% |
!!! | ACTACTGGTGGTTTTGAAGC+TGG | + | chr4.3:83666966-83666985 | MS.gene33718:CDS | 45.0% |
!!! | GTTCCCATCTCTGGTTTTGA+GGG | + | chr4.3:83667282-83667301 | MS.gene33718:CDS | 45.0% |
AATGAAATCCCTGTGTCCGG+GGG | - | chr4.3:83666889-83666908 | None:intergenic | 50.0% | |
AGCCATTTCCAATCTGGCCA+GGG | - | chr4.3:83667725-83667744 | None:intergenic | 50.0% | |
AGTCTCAACAACCATGGGCT+TGG | - | chr4.3:83667898-83667917 | None:intergenic | 50.0% | |
ATCCTGAAGTGGTAGTCGGA+GGG | - | chr4.3:83667412-83667431 | None:intergenic | 50.0% | |
ATGAATCACCCTGGCCAGAT+TGG | + | chr4.3:83667714-83667733 | MS.gene33718:CDS | 50.0% | |
ATGCGTCAAACTGTGGCTGT+TGG | + | chr4.3:83667960-83667979 | MS.gene33718:CDS | 50.0% | |
CACCACCATTCCAGGTTTCA+TGG | - | chr4.3:83667490-83667509 | None:intergenic | 50.0% | |
CACCCAAGTATTCCAAGAGC+AGG | + | chr4.3:83667187-83667206 | MS.gene33718:CDS | 50.0% | |
GAGACTGGTACCATGAAACC+TGG | + | chr4.3:83667477-83667496 | MS.gene33718:CDS | 50.0% | |
GAGCCCAAGTTCCTGAAGAA+TGG | + | chr4.3:83667843-83667862 | MS.gene33718:CDS | 50.0% | |
GATTGACAGGCGTTCTGGTA+AGG | + | chr4.3:83667809-83667828 | MS.gene33718:CDS | 50.0% | |
GCAAAAGTCACCACCATTCC+AGG | - | chr4.3:83667498-83667517 | None:intergenic | 50.0% | |
GCTCTCCTTGCTTTCACTCT+TGG | + | chr4.3:83667020-83667039 | MS.gene33718:CDS | 50.0% | |
GGGCATAGCCATTTCCAATC+TGG | - | chr4.3:83667731-83667750 | None:intergenic | 50.0% | |
GTGGCTGTTGGGGTTATCAA+GGG | + | chr4.3:83667972-83667991 | MS.gene33718:CDS | 50.0% | |
TAGCCATTTCCAATCTGGCC+AGG | - | chr4.3:83667726-83667745 | None:intergenic | 50.0% | |
TCTGGGAAGTCAACTACCAC+TGG | + | chr4.3:83666663-83666682 | MS.gene33718:CDS | 50.0% | |
TCTGTCAAGGATCTCAAGCG+TGG | + | chr4.3:83667621-83667640 | MS.gene33718:CDS | 50.0% | |
TGCGTCAAACTGTGGCTGTT+GGG | + | chr4.3:83667961-83667980 | MS.gene33718:CDS | 50.0% | |
TGTGAAGTTAGCAGCCTCCT+TGG | - | chr4.3:83667679-83667698 | None:intergenic | 50.0% | |
TGTGGCTGTTGGGGTTATCA+AGG | + | chr4.3:83667971-83667990 | MS.gene33718:CDS | 50.0% | |
TGTTGGGGTTATCAAGGGTG+TGG | + | chr4.3:83667977-83667996 | MS.gene33718:CDS | 50.0% | |
TTGACAAGCGTGTGATCGAG+AGG | + | chr4.3:83666712-83666731 | MS.gene33718:CDS | 50.0% | |
TTGACTTCCCAGAGTCGACA+TGG | - | chr4.3:83666656-83666675 | None:intergenic | 50.0% | |
! | AGCAAGGAGAGCATGTTCAC+GGG | - | chr4.3:83667012-83667031 | None:intergenic | 50.0% |
! | GTGGTGACTTTTGCTCCAAC+TGG | + | chr4.3:83667504-83667523 | MS.gene33718:CDS | 50.0% |
! | TCAACAACCATGGGCTTGGT+GGG | - | chr4.3:83667894-83667913 | None:intergenic | 50.0% |
!! | TCATTGGCCATGTCGACTCT+GGG | + | chr4.3:83666646-83666665 | MS.gene33718:CDS | 50.0% |
!! | TGGGTCATCCTTGGTGTTTG+AGG | - | chr4.3:83667655-83667674 | None:intergenic | 50.0% |
!!! | CGTTCCCATCTCTGGTTTTG+AGG | + | chr4.3:83667281-83667300 | MS.gene33718:CDS | 50.0% |
AAGTTAGCAGCCTCCTTGGC+TGG | - | chr4.3:83667675-83667694 | None:intergenic | 55.0% | |
ACAGCAAAACGGCCAAGTGG+AGG | - | chr4.3:83667933-83667952 | None:intergenic | 55.0% | |
AGGTGTGGCAGTCAAGCACA+GGG | - | chr4.3:83667752-83667771 | None:intergenic | 55.0% | |
AGTTAGCAGCCTCCTTGGCT+GGG | - | chr4.3:83667674-83667693 | None:intergenic | 55.0% | |
CAAGGGCCCAACACTTCTTG+AGG | + | chr4.3:83667344-83667363 | MS.gene33718:CDS | 55.0% | |
CACCCTGGCCAGATTGGAAA+TGG | + | chr4.3:83667720-83667739 | MS.gene33718:CDS | 55.0% | |
CATCCTGAAGTGGTAGTCGG+AGG | - | chr4.3:83667413-83667432 | None:intergenic | 55.0% | |
CTCAACAACCATGGGCTTGG+TGG | - | chr4.3:83667895-83667914 | None:intergenic | 55.0% | |
CTCAAGGCTGAGCGTGAAAG+AGG | + | chr4.3:83666798-83666817 | MS.gene33718:CDS | 55.0% | |
CTGACAGCAAAACGGCCAAG+TGG | - | chr4.3:83667936-83667955 | None:intergenic | 55.0% | |
GATGATTCCCACCAAGCCCA+TGG | + | chr4.3:83667884-83667903 | MS.gene33718:CDS | 55.0% | |
GCACTTCCCGGTGACAATGT+GGG | + | chr4.3:83667579-83667598 | MS.gene33718:CDS | 55.0% | |
GCGTCAAACTGTGGCTGTTG+GGG | + | chr4.3:83667962-83667981 | MS.gene33718:CDS | 55.0% | |
GGCTTGTCTGATGGCCTCTT+AGG | - | chr4.3:83667390-83667409 | None:intergenic | 55.0% | |
GGTGTGGAGAAGAAGGAACC+TGG | + | chr4.3:83667993-83668012 | MS.gene33718:CDS | 55.0% | |
TCCTGAAGTGGTAGTCGGAG+GGG | - | chr4.3:83667411-83667430 | None:intergenic | 55.0% | |
TGACAGCAATGTGGGAGGTG+TGG | - | chr4.3:83667767-83667786 | None:intergenic | 55.0% | |
TGCACTGTCATTGATGCCCC+CGG | + | chr4.3:83666870-83666889 | MS.gene33718:CDS | 55.0% | |
TTCACGGGTCTGACCATCCT+TGG | - | chr4.3:83666997-83667016 | None:intergenic | 55.0% | |
! | TCTCTCACTGAGGCACTTCC+CGG | + | chr4.3:83667567-83667586 | MS.gene33718:CDS | 55.0% |
!! | GTCATTGGCCATGTCGACTC+TGG | + | chr4.3:83666645-83666664 | MS.gene33718:CDS | 55.0% |
AGTCGGAGGGGCTTGTCTGA+TGG | - | chr4.3:83667399-83667418 | None:intergenic | 60.0% | |
CAAGGATGACCCAGCCAAGG+AGG | + | chr4.3:83667662-83667681 | MS.gene33718:CDS | 60.0% | |
CACCAAGGATGACCCAGCCA+AGG | + | chr4.3:83667659-83667678 | MS.gene33718:CDS | 60.0% | |
CATTGATGCCCCCGGACACA+GGG | + | chr4.3:83666878-83666897 | MS.gene33718:CDS | 60.0% | |
CCAGTCTCAACACGTCCGAC+AGG | - | chr4.3:83667465-83667484 | None:intergenic | 60.0% | |
CCTGTCGGACGTGTTGAGAC+TGG | + | chr4.3:83667462-83667481 | MS.gene33718:CDS | 60.0% | |
CTCCTTGGCTGGGTCATCCT+TGG | - | chr4.3:83667664-83667683 | None:intergenic | 60.0% | |
GAGGTGTGGCAGTCAAGCAC+AGG | - | chr4.3:83667753-83667772 | None:intergenic | 60.0% | |
GGCACTTCCCGGTGACAATG+TGG | + | chr4.3:83667578-83667597 | MS.gene33718:CDS | 60.0% | |
GGTGTGGCAGTCAAGCACAG+GGG | - | chr4.3:83667751-83667770 | None:intergenic | 60.0% | |
TCATTGATGCCCCCGGACAC+AGG | + | chr4.3:83666877-83666896 | MS.gene33718:CDS | 60.0% | |
GCCCCTCCGACTACCACTTC+AGG | + | chr4.3:83667407-83667426 | MS.gene33718:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 83666612 | 83668055 | 83666612 | ID=MS.gene33718 |
chr4.3 | mRNA | 83666612 | 83668055 | 83666612 | ID=MS.gene33718.t1;Parent=MS.gene33718 |
chr4.3 | exon | 83666612 | 83667073 | 83666612 | ID=MS.gene33718.t1.exon1;Parent=MS.gene33718.t1 |
chr4.3 | CDS | 83666612 | 83667073 | 83666612 | ID=cds.MS.gene33718.t1;Parent=MS.gene33718.t1 |
chr4.3 | exon | 83667174 | 83668055 | 83667174 | ID=MS.gene33718.t1.exon2;Parent=MS.gene33718.t1 |
chr4.3 | CDS | 83667174 | 83668055 | 83667174 | ID=cds.MS.gene33718.t1;Parent=MS.gene33718.t1 |
Gene Sequence |
Protein sequence |