AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059367


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059367.t1 MTR_8g083280 94.571 350 16 2 1 348 1 349 0.0 660
MS.gene059367.t1 MTR_8g083290 56.233 361 128 9 6 348 3 351 8.86e-132 384
MS.gene059367.t1 MTR_3g084520 53.388 369 139 9 4 348 3 362 2.39e-124 366
MS.gene059367.t1 MTR_3g084530 51.220 369 147 10 4 348 3 362 1.33e-116 346
MS.gene059367.t1 MTR_3g084540 51.220 369 147 10 4 348 3 362 1.40e-115 343
MS.gene059367.t1 MTR_5g035580 34.722 360 197 11 3 348 9 344 6.35e-61 202
MS.gene059367.t1 MTR_5g035560 34.734 357 193 11 7 348 11 342 4.88e-58 196
MS.gene059367.t1 MTR_6g038240 37.119 361 182 13 7 348 11 345 3.42e-55 187
MS.gene059367.t1 MTR_6g038300 36.740 362 189 13 4 348 8 346 2.02e-54 185
MS.gene059367.t1 MTR_6g038230 36.415 357 198 13 3 348 7 345 3.16e-53 182
MS.gene059367.t1 MTR_1g107380 33.973 365 204 11 7 348 13 363 1.95e-51 177
MS.gene059367.t1 MTR_6g038220 34.819 359 200 12 3 348 7 344 2.75e-50 174
MS.gene059367.t1 MTR_1g032490 33.149 362 214 10 5 348 8 359 3.94e-50 174
MS.gene059367.t1 MTR_6g038200 35.655 359 190 13 7 348 11 345 4.89e-50 173
MS.gene059367.t1 MTR_1g107315 32.703 370 211 11 2 348 3 357 9.73e-49 171
MS.gene059367.t1 MTR_8g083300 55.405 148 60 3 1 148 1 142 1.54e-48 160
MS.gene059367.t1 MTR_3g049970 33.058 363 209 12 7 348 9 358 2.97e-48 169
MS.gene059367.t1 MTR_7g080950 34.262 359 193 11 7 348 6 338 3.41e-47 166
MS.gene059367.t1 MTR_1g107350 33.242 364 207 12 7 348 8 357 1.44e-46 165
MS.gene059367.t1 MTR_8g088560 32.964 361 209 12 3 348 6 348 9.50e-46 162
MS.gene059367.t1 MTR_7g080900 35.556 360 188 16 7 348 12 345 1.32e-45 162
MS.gene059367.t1 MTR_4g095008 30.939 362 213 10 7 348 11 355 1.46e-45 163
MS.gene059367.t1 MTR_8g064880 32.162 370 209 11 7 348 9 364 1.74e-45 162
MS.gene059367.t1 MTR_4g094920 31.667 360 213 9 7 348 26 370 6.39e-44 158
MS.gene059367.t1 MTR_1g107365 31.081 370 195 9 7 348 45 382 6.73e-44 158
MS.gene059367.t1 MTR_7g080935 34.722 360 190 13 7 348 11 343 1.04e-42 154
MS.gene059367.t1 MTR_8g064870 32.698 367 205 14 8 348 12 362 7.04e-42 152
MS.gene059367.t1 MTR_7g080940 33.983 359 194 14 7 348 11 343 7.44e-42 152
MS.gene059367.t1 MTR_1g107360 31.268 355 218 11 7 348 9 350 4.02e-41 150
MS.gene059367.t1 MTR_1g107375 31.793 368 194 13 7 348 8 344 5.50e-41 149
MS.gene059367.t1 MTR_5g016480 29.111 371 215 13 8 348 9 361 1.61e-39 145
MS.gene059367.t1 MTR_1g107285 30.362 359 216 8 8 348 9 351 6.79e-37 139
MS.gene059367.t1 MTR_8g081120 51.538 130 53 4 139 267 8 128 5.33e-32 117
MS.gene059367.t1 MTR_5g464810 28.647 377 218 13 7 348 12 372 9.53e-30 119
MS.gene059367.t1 MTR_5g064240 28.647 377 218 13 7 348 12 372 9.53e-30 119
MS.gene059367.t1 MTR_5g464760 29.412 374 221 13 7 348 12 374 2.29e-29 118
MS.gene059367.t1 MTR_5g072840 28.134 359 206 12 7 348 10 333 3.50e-29 117
MS.gene059367.t1 MTR_3g031450 27.089 347 222 10 7 348 18 338 1.38e-28 115
MS.gene059367.t1 MTR_3g479490 27.005 374 230 11 7 348 6 368 1.94e-28 115
MS.gene059367.t1 MTR_3g079480 26.933 375 229 13 7 348 21 383 4.07e-28 114
MS.gene059367.t1 MTR_5g072810 27.500 360 210 13 7 348 12 338 1.23e-27 112
MS.gene059367.t1 MTR_5g072830 27.143 350 221 12 7 348 10 333 1.67e-27 112
MS.gene059367.t1 MTR_5g072860 26.685 371 207 12 7 348 18 352 4.13e-27 111
MS.gene059367.t1 MTR_5g075440 27.500 360 216 13 7 348 10 342 8.82e-27 110
MS.gene059367.t1 MTR_3g031400 26.957 345 223 9 7 348 18 336 9.91e-27 110
MS.gene059367.t1 MTR_5g031840 28.455 369 221 13 7 348 5 357 2.30e-26 109
MS.gene059367.t1 MTR_6g014290 26.943 386 225 13 2 348 5 372 2.31e-26 109
MS.gene059367.t1 MTR_4g094220 26.873 387 230 14 1 348 1 373 3.25e-26 109
MS.gene059367.t1 MTR_2g008210 27.224 371 230 12 7 348 11 370 3.99e-26 108
MS.gene059367.t1 MTR_0036s0220 28.191 376 221 15 7 348 12 372 1.25e-25 107
MS.gene059367.t1 MTR_5g072820 27.222 360 208 13 7 348 10 333 2.26e-25 106
MS.gene059367.t1 MTR_3g479470 27.056 377 225 12 7 348 13 374 3.18e-24 103
MS.gene059367.t1 MTR_6g014220 26.632 383 230 15 2 348 5 372 6.85e-24 102
MS.gene059367.t1 MTR_4g064987 27.072 362 219 13 5 348 6 340 1.03e-23 101
MS.gene059367.t1 MTR_4g064987 26.975 367 219 13 5 348 6 346 2.27e-23 100
MS.gene059367.t1 MTR_3g008010 27.926 376 224 14 7 348 10 372 6.19e-23 99.8
MS.gene059367.t1 MTR_6g014250 26.440 382 232 12 2 348 5 372 6.94e-23 99.8
MS.gene059367.t1 MTR_6g014020 28.021 389 219 16 2 348 5 374 1.11e-22 99.0
MS.gene059367.t1 MTR_7g013180 27.348 362 218 14 7 348 5 341 1.54e-22 98.2
MS.gene059367.t1 MTR_6g014040 27.225 382 222 14 7 348 10 375 2.65e-22 97.8
MS.gene059367.t1 MTR_3g069690 28.533 368 205 14 7 348 8 343 5.41e-22 97.1
MS.gene059367.t1 MTR_3g479520 25.401 374 236 14 7 348 15 377 7.61e-22 96.7
MS.gene059367.t1 MTR_7g013200 26.346 353 225 12 7 348 5 333 8.57e-22 96.3
MS.gene059367.t1 MTR_5g031860 28.877 374 214 15 7 348 12 365 1.11e-21 95.9
MS.gene059367.t1 MTR_7g013240 27.195 353 221 13 7 348 6 333 1.45e-21 95.5
MS.gene059367.t1 MTR_5g031830 28.075 374 218 14 7 348 12 366 2.70e-21 95.1
MS.gene059367.t1 MTR_7g070660 26.933 375 219 18 2 345 6 356 3.78e-21 94.7
MS.gene059367.t1 MTR_7g013260 26.000 350 230 11 7 348 6 334 8.41e-21 93.2
MS.gene059367.t1 MTR_7g070610 25.661 378 229 16 3 348 9 366 1.82e-20 92.8
MS.gene059367.t1 MTR_7g013220 25.620 363 226 13 7 348 5 344 2.20e-20 92.0
MS.gene059367.t1 MTR_4g082810 30.088 226 117 10 150 348 146 357 2.66e-20 91.7
MS.gene059367.t1 MTR_7g070780 26.216 370 233 15 2 345 6 361 5.92e-20 91.3
MS.gene059367.t1 MTR_5g072850 38.462 130 78 1 219 348 160 287 8.34e-20 90.1
MS.gene059367.t1 MTR_7g080960 32.174 230 134 9 7 233 12 222 8.49e-20 90.5
MS.gene059367.t1 MTR_3g069710 27.901 362 216 13 6 348 11 346 1.18e-19 90.1
MS.gene059367.t1 MTR_6g014187 26.823 384 220 14 7 348 10 374 1.89e-19 89.7
MS.gene059367.t1 MTR_2g008226 24.242 363 243 11 7 348 10 361 3.42e-19 88.6
MS.gene059367.t1 MTR_7g102490 29.167 264 145 10 112 348 119 367 4.72e-19 88.6
MS.gene059367.t1 MTR_7g011470 28.032 371 218 14 7 348 10 360 6.14e-19 87.8
MS.gene059367.t1 MTR_7g011470 28.571 371 212 15 7 348 10 356 6.45e-19 87.8
MS.gene059367.t1 MTR_6g014186 25.532 376 229 14 1 339 1 362 1.28e-18 87.0
MS.gene059367.t1 MTR_5g098960 25.627 359 228 15 8 348 8 345 1.69e-18 86.7
MS.gene059367.t1 MTR_5g004940 49.474 95 39 2 263 348 191 285 2.32e-18 85.9
MS.gene059367.t1 MTR_5g004940 28.814 177 116 5 6 178 16 186 3.54e-16 79.3
MS.gene059367.t1 MTR_6g013440 25.654 382 227 15 7 348 11 375 3.58e-18 85.9
MS.gene059367.t1 MTR_6g014310 26.542 373 235 14 7 348 11 375 4.69e-18 85.5
MS.gene059367.t1 MTR_6g014200 27.907 387 224 16 1 348 1 371 5.15e-18 85.1
MS.gene059367.t1 MTR_7g070860 28.631 241 145 9 115 345 117 340 5.43e-18 85.1
MS.gene059367.t1 MTR_0288s0020 24.672 381 223 14 2 348 5 355 8.13e-18 84.7
MS.gene059367.t1 MTR_5g090700 22.312 372 238 9 7 345 5 358 1.13e-17 84.3
MS.gene059367.t1 MTR_6g014270 25.450 389 233 13 1 348 1 373 1.29e-17 84.0
MS.gene059367.t1 MTR_7g055710 25.606 371 234 14 2 345 6 361 1.51e-17 84.0
MS.gene059367.t1 MTR_8g059425 26.702 382 221 15 7 348 10 372 1.65e-17 84.0
MS.gene059367.t1 MTR_7g070740 26.509 381 218 19 2 345 6 361 1.94e-17 83.6
MS.gene059367.t1 MTR_4g082820 29.032 217 115 8 158 348 152 355 2.07e-17 83.6
MS.gene059367.t1 MTR_6g014170 25.654 382 219 14 2 348 5 356 2.68e-17 83.2
MS.gene059367.t1 MTR_6g014050 27.132 387 215 15 7 348 11 375 3.66e-17 82.8
MS.gene059367.t1 MTR_0891s0010 32.240 183 102 7 183 348 7 184 4.35e-17 80.9
MS.gene059367.t1 MTR_6g013990 25.445 393 212 14 7 348 10 372 5.21e-17 82.4
MS.gene059367.t1 MTR_4g128690 22.989 348 246 8 7 348 15 346 1.21e-16 80.9
MS.gene059367.t1 MTR_7g102460 25.876 371 232 15 7 348 9 365 1.22e-16 81.3
MS.gene059367.t1 MTR_7g070800 24.528 371 225 14 7 345 6 353 1.42e-16 80.9
MS.gene059367.t1 MTR_3g479610 30.601 183 105 6 183 348 30 207 1.42e-16 79.7
MS.gene059367.t1 MTR_7g070930 24.933 373 235 15 2 345 9 365 1.45e-16 80.9
MS.gene059367.t1 MTR_0078s0010 25.858 379 216 17 7 348 6 356 1.69e-16 80.9
MS.gene059367.t1 MTR_4g128720 22.792 351 246 12 7 348 15 349 1.72e-16 80.5
MS.gene059367.t1 MTR_8g006710 25.606 371 224 9 8 348 7 355 2.41e-16 80.1
MS.gene059367.t1 MTR_5g090660 22.251 382 228 9 7 348 5 357 2.97e-16 80.1
MS.gene059367.t1 MTR_5g090600 22.409 357 233 13 7 345 5 335 8.95e-16 78.6
MS.gene059367.t1 MTR_6g078320 24.165 389 220 13 7 348 11 371 9.84e-16 78.6
MS.gene059367.t1 MTR_6g014150 25.707 389 230 15 1 348 1 371 1.40e-15 77.8
MS.gene059367.t1 MTR_7g047030 24.869 382 216 17 7 348 6 356 1.75e-15 77.8
MS.gene059367.t1 MTR_7g047270 24.869 382 216 17 7 348 6 356 1.75e-15 77.8
MS.gene059367.t1 MTR_8g465670 25.330 379 227 14 1 347 1 355 1.98e-15 77.4
MS.gene059367.t1 MTR_6g033660 26.616 263 163 7 103 348 105 354 3.24e-15 77.0
MS.gene059367.t1 MTR_0184s0040 33.775 151 77 5 219 348 223 371 4.04e-15 76.6
MS.gene059367.t1 MTR_0078s0190 33.775 151 77 5 219 348 223 371 4.04e-15 76.6
MS.gene059367.t1 MTR_6g033725 35.354 198 95 11 169 348 170 352 4.09e-15 76.6
MS.gene059367.t1 MTR_6g488280 32.886 149 76 4 219 348 211 354 5.07e-15 76.3
MS.gene059367.t1 MTR_0428s0010 32.886 149 76 4 219 348 211 354 5.07e-15 76.3
MS.gene059367.t1 MTR_5g090670 30.968 155 78 4 219 348 211 361 5.20e-15 76.3
MS.gene059367.t1 MTR_6g013450 26.302 384 223 14 7 348 10 375 5.35e-15 76.3
MS.gene059367.t1 MTR_2g059240 26.596 376 219 17 5 348 11 361 5.78e-15 76.3
MS.gene059367.t1 MTR_8g012635 25.654 382 217 17 7 347 6 361 6.72e-15 75.9
MS.gene059367.t1 MTR_6g013960 24.737 380 233 14 7 348 10 374 8.68e-15 75.5
MS.gene059367.t1 MTR_6g023665 25.000 368 229 12 8 348 14 361 1.10e-14 75.1
MS.gene059367.t1 MTR_7g070910 24.324 370 241 13 2 345 6 362 1.38e-14 75.1
MS.gene059367.t1 MTR_5g045970 25.132 378 224 17 7 348 16 370 1.59e-14 74.7
MS.gene059367.t1 MTR_6g011340 24.675 385 227 12 7 348 10 374 2.16e-14 74.3
MS.gene059367.t1 MTR_4g485630 26.016 369 227 16 7 348 9 358 2.41e-14 74.3
MS.gene059367.t1 MTR_4g024020 25.670 261 158 9 112 348 119 367 2.52e-14 74.3
MS.gene059367.t1 MTR_7g070810 25.208 361 230 13 7 345 9 351 2.97e-14 73.9
MS.gene059367.t1 MTR_0477s0010 29.108 213 109 6 144 348 33 211 3.63e-14 72.8
MS.gene059367.t1 MTR_1g107340 28.834 163 106 2 8 164 9 167 3.66e-14 72.0
MS.gene059367.t1 MTR_6g013920 27.013 385 217 17 7 348 10 373 5.50e-14 73.2
MS.gene059367.t1 MTR_7g070870 28.395 243 149 8 115 345 129 358 8.11e-14 72.4
MS.gene059367.t1 MTR_2g046750 27.094 203 117 6 166 348 164 355 8.36e-14 72.4
MS.gene059367.t1 MTR_0078s0060 34.868 152 73 7 219 348 208 355 8.66e-14 72.4
MS.gene059367.t1 MTR_2g008225 24.586 362 234 13 7 348 15 357 9.02e-14 72.4
MS.gene059367.t1 MTR_8g006730 24.462 372 230 13 7 348 6 356 1.15e-13 72.0
MS.gene059367.t1 MTR_2g046620 22.652 362 236 12 7 348 16 353 1.38e-13 72.0
MS.gene059367.t1 MTR_8g006220 31.013 158 73 4 219 347 212 362 1.41e-13 72.0
MS.gene059367.t1 MTR_7g071040 24.528 371 239 13 2 345 12 368 1.56e-13 71.6
MS.gene059367.t1 MTR_4g108250 23.670 376 239 14 2 345 6 365 2.06e-13 71.2
MS.gene059367.t1 MTR_2g008220 23.464 358 243 14 7 348 14 356 2.06e-13 71.2
MS.gene059367.t1 MTR_6g013900 26.494 385 219 16 7 348 10 373 2.27e-13 71.2
MS.gene059367.t1 MTR_5g090580 30.519 154 78 5 219 348 211 359 2.50e-13 71.2
MS.gene059367.t1 MTR_5g090620 27.358 212 117 7 159 345 158 357 2.82e-13 70.9
MS.gene059367.t1 MTR_8g012745 30.921 152 78 4 220 347 211 359 2.84e-13 70.9
MS.gene059367.t1 MTR_6g005600 32.903 155 74 5 219 348 209 358 2.99e-13 70.9
MS.gene059367.t1 MTR_5g090610 22.520 373 220 14 7 345 5 342 4.41e-13 70.5
MS.gene059367.t1 MTR_8g027885 30.464 151 79 4 219 348 218 363 5.28e-13 70.1
MS.gene059367.t1 MTR_7g067330 22.946 353 222 9 7 348 9 322 5.95e-13 69.7
MS.gene059367.t1 MTR_4g031800 24.390 369 226 15 8 348 10 353 7.46e-13 69.7
MS.gene059367.t1 MTR_7g102560 30.667 150 82 4 219 348 215 362 7.59e-13 69.7
MS.gene059367.t1 MTR_5g058320 29.703 202 110 7 167 348 170 359 7.87e-13 69.7
MS.gene059367.t1 MTR_6g033625 32.653 196 101 9 171 348 173 355 8.90e-13 69.3
MS.gene059367.t1 MTR_5g019580 36.090 133 72 4 198 320 211 340 9.51e-13 69.3
MS.gene059367.t1 MTR_7g067120 22.946 353 222 11 7 348 9 322 1.02e-12 69.3
MS.gene059367.t1 MTR_5g019580 36.090 133 72 4 198 320 187 316 1.09e-12 69.3
MS.gene059367.t1 MTR_6g033675 34.694 147 75 6 219 348 213 355 1.30e-12 68.9
MS.gene059367.t1 MTR_8g077590 22.691 379 224 15 7 347 9 356 1.34e-12 68.9
MS.gene059367.t1 MTR_7g046490 26.531 245 140 12 128 347 124 353 1.48e-12 68.6
MS.gene059367.t1 MTR_8g068340 23.545 378 223 13 7 348 12 359 1.64e-12 68.6
MS.gene059367.t1 MTR_5g090630 23.622 381 211 15 7 345 5 347 1.67e-12 68.6
MS.gene059367.t1 MTR_7g117405 25.134 374 223 15 7 348 12 360 1.89e-12 68.6
MS.gene059367.t1 MTR_6g013680 35.032 157 75 8 173 315 138 281 2.24e-12 67.8
MS.gene059367.t1 MTR_6g033615 29.279 222 119 8 144 348 141 341 3.30e-12 67.8
MS.gene059367.t1 MTR_6g052375 30.392 204 90 10 163 341 18 194 4.87e-12 66.6
MS.gene059367.t1 MTR_7g102550 25.000 376 232 15 4 347 6 363 5.11e-12 67.0
MS.gene059367.t1 MTR_8g027870 29.139 151 81 4 219 348 218 363 5.68e-12 67.0
MS.gene059367.t1 MTR_5g070040 36.986 146 74 7 219 348 215 358 5.74e-12 67.0
MS.gene059367.t1 MTR_0184s0030 32.215 149 79 6 220 348 212 358 1.19e-11 65.9
MS.gene059367.t1 MTR_2g098430 24.267 375 239 13 4 348 3 362 1.26e-11 65.9
MS.gene059367.t1 MTR_5g098930 29.054 148 84 2 219 345 202 349 1.32e-11 65.9
MS.gene059367.t1 MTR_4g117950 23.098 368 225 13 8 348 7 343 1.45e-11 65.9
MS.gene059367.t1 MTR_8g006270 32.903 155 74 6 219 348 205 354 1.50e-11 65.9
MS.gene059367.t1 MTR_7g102450 23.416 363 234 13 7 348 11 350 1.81e-11 65.5
MS.gene059367.t1 MTR_7g470610 33.793 145 75 5 220 345 76 218 2.21e-11 64.3
MS.gene059367.t1 MTR_7g070583 33.793 145 75 5 220 345 76 218 2.21e-11 64.3
MS.gene059367.t1 MTR_3g009510 30.625 160 78 4 219 348 210 366 2.35e-11 65.1
MS.gene059367.t1 MTR_8g068360 23.360 381 219 13 7 348 12 358 2.52e-11 65.1
MS.gene059367.t1 MTR_7g070940 35.507 138 73 6 220 345 217 350 2.79e-11 64.7
MS.gene059367.t1 MTR_0009s0240 25.337 371 228 17 1 345 1 348 3.41e-11 64.7
MS.gene059367.t1 MTR_8g071070 25.263 380 227 15 1 345 1 358 5.03e-11 63.9
MS.gene059367.t1 MTR_2g040530 22.372 371 240 13 6 348 4 354 5.65e-11 63.9
MS.gene059367.t1 MTR_1g019510 30.263 152 79 5 219 348 208 354 7.80e-11 63.5
MS.gene059367.t1 MTR_4g118000 24.119 369 212 15 11 348 16 347 8.55e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059367.t1 AT4G15550 40.884 362 181 10 7 348 13 361 7.94e-85 265
MS.gene059367.t1 AT1G05560 42.265 362 166 10 7 348 5 343 2.00e-79 250
MS.gene059367.t1 AT1G05560 42.265 362 166 10 7 348 55 393 2.98e-79 251
MS.gene059367.t1 AT1G05530 41.598 363 170 10 7 348 5 346 1.51e-76 243
MS.gene059367.t1 AT4G14090 40.503 358 182 12 2 348 8 345 1.13e-71 230
MS.gene059367.t1 AT4G15500 33.520 358 207 11 7 348 9 351 5.51e-52 179
MS.gene059367.t1 AT4G15480 31.129 363 215 10 7 348 19 367 3.86e-49 172
MS.gene059367.t1 AT2G43820 35.135 370 184 16 1 348 1 336 9.38e-49 170
MS.gene059367.t1 AT4G15490 31.044 364 219 10 4 348 5 355 2.90e-48 169
MS.gene059367.t1 AT1G24100 33.053 357 205 10 7 348 11 348 1.11e-46 164
MS.gene059367.t1 AT3G21560 30.748 361 220 11 7 348 12 361 3.73e-45 161
MS.gene059367.t1 AT1G05675 30.959 365 202 10 7 348 6 343 8.24e-42 151
MS.gene059367.t1 AT2G43840 32.065 368 198 15 1 348 1 336 2.44e-41 150
MS.gene059367.t1 AT2G23250 31.519 349 205 12 10 348 1 325 3.02e-41 150
MS.gene059367.t1 AT2G43840 31.793 368 199 15 1 348 1 336 5.99e-41 149
MS.gene059367.t1 AT2G23260 30.874 366 203 16 4 348 7 343 1.44e-40 148
MS.gene059367.t1 AT2G31790 30.532 357 216 10 7 348 8 347 1.51e-40 148
MS.gene059367.t1 AT1G05680 30.303 363 207 10 7 348 6 343 1.75e-38 142
MS.gene059367.t1 AT2G31750 32.033 359 204 15 7 348 8 343 1.30e-37 140
MS.gene059367.t1 AT2G31750 32.033 359 204 15 7 348 8 343 2.42e-37 140
MS.gene059367.t1 AT2G36970 28.219 365 228 11 7 348 10 363 9.99e-36 135
MS.gene059367.t1 AT2G28080 29.121 364 213 14 11 348 22 366 3.30e-33 129
MS.gene059367.t1 AT2G30140 29.508 366 202 14 3 348 9 338 5.86e-30 119
MS.gene059367.t1 AT2G30140 29.863 365 201 14 3 348 9 337 1.38e-29 118
MS.gene059367.t1 AT1G22360 26.234 385 224 14 4 348 7 371 5.18e-29 117
MS.gene059367.t1 AT1G22360 26.234 385 224 14 4 348 7 371 5.75e-29 117
MS.gene059367.t1 AT1G22400 25.326 383 225 13 7 348 13 375 2.97e-27 112
MS.gene059367.t1 AT1G78270 26.943 386 224 17 2 348 8 374 2.64e-25 106
MS.gene059367.t1 AT2G23210 30.877 285 161 13 7 280 10 269 3.12e-25 103
MS.gene059367.t1 AT2G30150 27.989 368 200 15 6 348 12 339 1.11e-24 104
MS.gene059367.t1 AT1G22380 25.405 370 240 11 7 348 13 374 1.32e-24 104
MS.gene059367.t1 AT3G46670 27.493 371 206 12 6 348 8 343 2.65e-24 103
MS.gene059367.t1 AT5G38040 26.761 355 211 11 15 348 18 344 1.67e-23 101
MS.gene059367.t1 AT2G30150 28.255 361 194 15 13 348 3 323 2.46e-23 100
MS.gene059367.t1 AT5G59580 25.333 375 210 11 5 348 7 342 1.85e-22 98.2
MS.gene059367.t1 AT1G22370 25.661 378 234 13 2 348 8 369 3.79e-22 97.4
MS.gene059367.t1 AT1G22340 25.587 383 224 15 7 348 13 375 1.14e-21 96.3
MS.gene059367.t1 AT3G46660 27.493 371 210 15 5 348 12 350 1.99e-21 95.1
MS.gene059367.t1 AT5G38010 27.473 364 225 10 3 348 6 348 2.01e-21 95.1
MS.gene059367.t1 AT5G59590 26.374 364 217 13 7 348 10 344 4.68e-20 91.3
MS.gene059367.t1 AT4G34131 27.078 373 231 15 3 347 6 365 5.97e-20 90.9
MS.gene059367.t1 AT4G34135 25.858 379 232 16 2 347 3 365 1.45e-19 90.1
MS.gene059367.t1 AT3G16520 30.469 256 134 11 128 348 107 353 1.93e-19 89.4
MS.gene059367.t1 AT3G16520 30.469 256 134 11 128 348 107 353 1.95e-19 89.4
MS.gene059367.t1 AT3G16520 30.469 256 134 11 128 348 107 353 2.12e-19 89.4
MS.gene059367.t1 AT3G46700 24.665 373 214 13 4 348 6 339 3.76e-19 88.6
MS.gene059367.t1 AT3G46690 25.606 371 218 13 4 348 6 344 5.92e-19 87.8
MS.gene059367.t1 AT5G37950 27.309 249 161 5 108 348 78 314 6.50e-19 87.0
MS.gene059367.t1 AT3G02100 23.810 357 240 10 7 348 13 352 7.23e-19 87.8
MS.gene059367.t1 AT3G46650 24.793 363 209 15 6 348 9 327 1.10e-18 87.0
MS.gene059367.t1 AT2G36770 25.867 375 238 16 2 348 6 368 5.98e-18 85.1
MS.gene059367.t1 AT2G36780 24.397 373 246 14 2 348 6 368 1.51e-17 84.0
MS.gene059367.t1 AT2G29740 24.934 377 235 13 3 348 4 363 2.57e-17 83.2
MS.gene059367.t1 AT3G46680 23.925 372 225 11 3 348 5 344 5.07e-17 82.4
MS.gene059367.t1 AT5G37950 27.059 255 160 7 108 348 78 320 7.50e-17 80.9
MS.gene059367.t1 AT3G46720 25.215 349 232 9 7 348 9 335 2.44e-16 80.1
MS.gene059367.t1 AT2G29710 24.397 373 230 12 4 348 2 350 3.58e-16 79.7
MS.gene059367.t1 AT1G73880 24.462 372 225 13 7 348 14 359 4.79e-16 79.3
MS.gene059367.t1 AT4G34135 25.220 341 213 13 2 316 3 327 1.09e-15 77.4
MS.gene059367.t1 AT5G05870 35.915 142 74 4 219 347 211 348 4.92e-15 76.3
MS.gene059367.t1 AT4G15280 22.102 371 244 10 7 348 4 358 5.04e-15 76.3
MS.gene059367.t1 AT4G15280 22.102 371 244 10 7 348 36 390 5.62e-15 76.3
MS.gene059367.t1 AT2G36760 22.951 366 247 13 7 348 14 368 1.00e-14 75.5
MS.gene059367.t1 AT3G21800 33.108 148 80 4 219 348 213 359 1.28e-14 75.1
MS.gene059367.t1 AT1G07260 25.000 376 227 15 7 348 6 360 1.44e-14 75.1
MS.gene059367.t1 AT2G15480 27.224 371 228 16 7 348 10 367 1.53e-14 74.7
MS.gene059367.t1 AT2G29750 26.190 378 229 15 3 348 4 363 1.81e-14 74.7
MS.gene059367.t1 AT2G15480 27.224 371 228 16 7 348 10 367 1.84e-14 74.7
MS.gene059367.t1 AT5G05900 25.956 366 216 12 7 348 8 342 2.08e-14 74.3
MS.gene059367.t1 AT3G55700 24.586 362 231 13 6 348 7 345 2.36e-14 74.3
MS.gene059367.t1 AT1G01390 25.197 381 214 13 7 347 25 374 2.71e-14 74.3
MS.gene059367.t1 AT2G15490 26.862 376 235 14 1 348 1 364 2.80e-14 73.9
MS.gene059367.t1 AT1G01390 25.197 381 214 13 7 347 8 357 3.01e-14 73.9
MS.gene059367.t1 AT5G05880 24.800 375 210 11 7 348 8 343 3.61e-14 73.6
MS.gene059367.t1 AT4G34138 24.603 378 228 14 7 348 11 367 7.75e-14 72.8
MS.gene059367.t1 AT2G15490 26.121 379 237 14 1 348 1 367 9.31e-14 72.4
MS.gene059367.t1 AT2G29730 22.888 367 237 12 7 348 5 350 1.17e-13 72.0
MS.gene059367.t1 AT1G22370 30.052 193 98 8 180 348 20 199 3.07e-13 70.1
MS.gene059367.t1 AT3G21790 22.340 376 241 12 7 348 4 362 5.29e-13 70.1
MS.gene059367.t1 AT1G07250 30.723 166 89 5 204 348 201 361 1.24e-12 68.9
MS.gene059367.t1 AT5G66690 25.641 312 211 7 7 315 7 300 1.49e-12 68.9
MS.gene059367.t1 AT2G36750 23.770 366 243 13 7 348 10 363 2.52e-12 68.2
MS.gene059367.t1 AT1G10400 22.764 369 247 13 1 348 1 352 2.87e-12 67.8
MS.gene059367.t1 AT1G07240 30.216 139 87 3 219 347 221 359 3.72e-12 67.8
MS.gene059367.t1 AT3G21780 29.932 147 85 3 219 348 208 353 5.29e-12 67.0
MS.gene059367.t1 AT2G18560 33.333 156 85 5 211 348 110 264 5.89e-12 66.6
MS.gene059367.t1 AT5G65550 22.740 365 239 13 7 348 9 353 5.91e-12 67.0
MS.gene059367.t1 AT5G03490 36.364 132 75 6 222 348 226 353 6.58e-12 66.6
MS.gene059367.t1 AT5G26310 22.764 369 240 6 7 348 7 357 1.22e-11 65.9
MS.gene059367.t1 AT1G51210 31.008 129 87 2 222 348 221 349 1.52e-11 65.5
MS.gene059367.t1 AT2G18570 30.968 155 90 3 211 348 200 354 1.89e-11 65.5
MS.gene059367.t1 AT3G22250 23.077 377 231 12 7 348 8 360 1.95e-11 65.5
MS.gene059367.t1 AT3G55710 33.099 142 83 3 219 348 208 349 2.19e-11 65.1
MS.gene059367.t1 AT4G15260 30.612 147 82 4 219 348 95 238 2.29e-11 64.7
MS.gene059367.t1 AT1G30530 22.689 357 238 13 6 348 12 344 2.88e-11 64.7
MS.gene059367.t1 AT4G01070 31.788 151 78 5 219 347 210 357 2.95e-11 64.7
MS.gene059367.t1 AT3G21760 22.622 389 227 15 7 348 4 365 3.22e-11 64.7
MS.gene059367.t1 AT3G21750 32.026 153 77 5 219 348 205 353 3.78e-11 64.3
MS.gene059367.t1 AT4G01070 38.384 99 56 2 219 315 210 305 8.63e-11 62.8

Find 106 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTCTTTCACATTCTTCTT+TGG 0.160797 4.2:-13448169 MS.gene059367:CDS
TGAAAATCTTGTTGAAAATA+TGG 0.193622 4.2:+13448588 None:intergenic
ACATAAACAACAGAAGATTT+TGG 0.246598 4.2:+13448366 None:intergenic
GGGTTTATGTGGCCTTGAGC+TGG 0.250910 4.2:+13449152 None:intergenic
GTTCTTTCACATTCTTCTTT+GGG 0.258852 4.2:-13448168 None:intergenic
ATTCAATGGTAGTTTGGTTT+TGG 0.261860 4.2:+13448697 None:intergenic
CTGGTAATTCAATGGTAGTT+TGG 0.310098 4.2:+13448691 None:intergenic
ATTCTCTATTACTACTTTCA+TGG 0.315279 4.2:-13448747 MS.gene059367:CDS
TCTGTTGTTTATGTTTCTTT+TGG 0.336383 4.2:-13448357 MS.gene059367:CDS
CGTAAACACCTTTGAAGCTT+TGG 0.337494 4.2:-13448532 MS.gene059367:CDS
TCTACACGTTAATGCTTCCT+TGG 0.338389 4.2:-13448842 MS.gene059367:CDS
TGGATGGATTGAGGAGGATT+AGG 0.363651 4.2:+13449051 None:intergenic
AAGGTGTTTACGAGTATTAT+CGG 0.367438 4.2:+13448543 None:intergenic
GAAAGGTTTGGATTCTTGTT+TGG 0.378817 4.2:+13448875 None:intergenic
CGCTTGGCAAATTGAAGGGC+TGG 0.382574 4.2:+13449131 None:intergenic
CCACCACCACCACATCCTTC+TGG 0.390460 4.2:-13449183 MS.gene059367:CDS
GAAGGATGTGGTGGTGGTGG+TGG 0.396112 4.2:+13449186 None:intergenic
CGGTAGAGGTGGAGGGTGAT+AGG 0.403832 4.2:+13449077 None:intergenic
TAAAGATGAGTTGGAAAAGA+AGG 0.407665 4.2:-13448223 MS.gene059367:CDS
GAGGTTGGAGATGGTGGTTA+TGG 0.413944 4.2:+13449031 None:intergenic
AGTCATTTGAAGGTTGCAAT+AGG 0.422571 4.2:+13448412 None:intergenic
CATTCAATATAGTCATTTGA+AGG 0.424031 4.2:+13448402 None:intergenic
GTTGAAATTTAAAGATGAGT+TGG 0.425358 4.2:-13448232 MS.gene059367:CDS
TTGCAATAGGTCACCGCTAA+AGG 0.428659 4.2:+13448425 None:intergenic
TTTGGCAGAGAGTATAAGAT+TGG 0.437133 4.2:+13448893 None:intergenic
CCAGAAGGATGTGGTGGTGG+TGG 0.440317 4.2:+13449183 None:intergenic
TATGGAGAGGTTGGAGATGG+TGG 0.448776 4.2:+13449025 None:intergenic
CAAGTGCGTTGTTGAATTGT+GGG 0.449033 4.2:-13448293 MS.gene059367:CDS
CTACACGTTAATGCTTCCTT+GGG 0.449608 4.2:-13448841 MS.gene059367:CDS
GGTTTATGTGGCCTTGAGCT+GGG 0.453046 4.2:+13449153 None:intergenic
TTAGGCGACGGTAGAGGTGG+AGG 0.465565 4.2:+13449069 None:intergenic
CTCTGGCTCCAAAGCTTCAA+AGG 0.465787 4.2:+13448524 None:intergenic
TGCCAAGCGACTCATATCAA+TGG 0.465795 4.2:-13449117 MS.gene059367:CDS
AAAGATGAGTTGGAAAAGAA+GGG 0.469951 4.2:-13448222 MS.gene059367:CDS
ATCGTCATGGCCATCGGAGA+AGG 0.471514 4.2:+13448998 None:intergenic
AGACAAGTCACCAGGATTTG+AGG 0.475080 4.2:+13448620 None:intergenic
ATTGAAGGGCTGGGTTTATG+TGG 0.477702 4.2:+13449141 None:intergenic
GAGTAAGCAAGTGAAAGGTT+TGG 0.478164 4.2:+13448863 None:intergenic
CTTCAAATGACTATATTGAA+TGG 0.480500 4.2:-13448401 MS.gene059367:CDS
TTGGAGATGGTGGTTATGGA+TGG 0.481152 4.2:+13449035 None:intergenic
TCCGGTAGTACTTCCTTTAG+CGG 0.499324 4.2:-13448438 MS.gene059367:CDS
TCGTCATGGCCATCGGAGAA+GGG 0.500781 4.2:+13448999 None:intergenic
GATAGTGTGAAGGGCAATCC+TGG 0.502974 4.2:+13448672 None:intergenic
TCAACGGCTCTAAGTGCCTC+TGG 0.506658 4.2:+13448507 None:intergenic
GCCAAGCGACTCATATCAAT+GGG 0.506703 4.2:-13449116 MS.gene059367:CDS
TGAGTCGCTTGGCAAATTGA+AGG 0.509396 4.2:+13449126 None:intergenic
GCAAGTGCGTTGTTGAATTG+TGG 0.515077 4.2:-13448294 MS.gene059367:CDS
GCTTGGCAAATTGAAGGGCT+GGG 0.519390 4.2:+13449132 None:intergenic
CAAACTACCATTGAATTACC+AGG 0.521103 4.2:-13448690 MS.gene059367:CDS
AAGGATGTGGTGGTGGTGGT+GGG 0.521392 4.2:+13449187 None:intergenic
TGTTGAACTGTGAAGTGTAT+AGG 0.522665 4.2:+13448937 None:intergenic
GGTGATGAAGTCGGAGCCAC+GGG 0.524438 4.2:+13448914 None:intergenic
GTACTACCGGAGGGAATCAA+TGG 0.525946 4.2:+13448450 None:intergenic
GGATTAGGCGACGGTAGAGG+TGG 0.538007 4.2:+13449066 None:intergenic
GAAACCATCGTCATGGCCAT+CGG 0.543402 4.2:+13448992 None:intergenic
AGAATATCAAACACTGTGGC+GGG 0.545004 4.2:+13448765 None:intergenic
ATCGGACCATTGATTCCCTC+CGG 0.545735 4.2:-13448456 MS.gene059367:CDS
GTTTACGAGTATTATCGGAT+TGG 0.548691 4.2:+13448548 None:intergenic
GGTTATGGAGAGGTTGGAGA+TGG 0.552642 4.2:+13449022 None:intergenic
GGGCAATCCTGGTAATTCAA+TGG 0.555277 4.2:+13448683 None:intergenic
TTCTCCGATGGCCATGACGA+TGG 0.557095 4.2:-13448996 MS.gene059367:CDS
CTTTGAAGCTTTGGAGCCAG+AGG 0.557170 4.2:-13448523 MS.gene059367:CDS
ACCGCTAAAGGAAGTACTAC+CGG 0.558600 4.2:+13448437 None:intergenic
TGGTGATGAAGTCGGAGCCA+CGG 0.561307 4.2:+13448913 None:intergenic
ACCTCCGCTCAGCTAAACTC+TGG 0.561490 4.2:-13448794 MS.gene059367:CDS
ACCCATTGATATGAGTCGCT+TGG 0.561897 4.2:+13449115 None:intergenic
TGGTGGTTATGGATGGATTG+AGG 0.564410 4.2:+13449042 None:intergenic
CGAGCTACTTGTGGAGCCCA+AGG 0.565805 4.2:+13448825 None:intergenic
GTCACGTGGCGATAGTGTGA+AGG 0.567114 4.2:+13448662 None:intergenic
GGAGGATTAGGCGACGGTAG+AGG 0.575095 4.2:+13449063 None:intergenic
TTGAATCCACGAGCTACTTG+TGG 0.578084 4.2:+13448816 None:intergenic
GGAGGGAATCAATGGTCCGA+TGG 0.581754 4.2:+13448458 None:intergenic
ATCAGCGTCGGTCTTTGTGA+TGG 0.582570 4.2:+13448965 None:intergenic
AAGATGAGTTGGAAAAGAAG+GGG 0.583738 4.2:-13448221 MS.gene059367:CDS
CGTCATGGCCATCGGAGAAG+GGG 0.584133 4.2:+13449000 None:intergenic
CTGGTAACGTACCCAGCTCA+AGG 0.588788 4.2:-13449164 MS.gene059367:CDS
GTGTAGAGTAAGCAAGTGAA+AGG 0.589149 4.2:+13448858 None:intergenic
GAGAATATCAAACACTGTGG+CGG 0.589449 4.2:+13448764 None:intergenic
GAGGTTATGATGAGTATCAA+CGG 0.591472 4.2:+13448491 None:intergenic
AGTGAAGTGGTGTTCTCAAG+TGG 0.591682 4.2:-13448193 MS.gene059367:CDS
TATAAGATTGGTGATGAAGT+CGG 0.591974 4.2:+13448905 None:intergenic
GAGGGAATCAATGGTCCGAT+GGG 0.595436 4.2:+13448459 None:intergenic
GAGTCGCTTGGCAAATTGAA+GGG 0.597812 4.2:+13449127 None:intergenic
AGAAGGGGAAGATAGTGAAG+TGG 0.600131 4.2:-13448206 MS.gene059367:CDS
TGGGCTCCACAAGTAGCTCG+TGG 0.600705 4.2:-13448822 MS.gene059367:CDS
AAAACAAAAGACAAGTCACC+AGG 0.608502 4.2:+13448612 None:intergenic
TCACGTGGCGATAGTGTGAA+GGG 0.616536 4.2:+13448663 None:intergenic
TCCAGAGTTTAGCTGAGCGG+AGG 0.617889 4.2:+13448793 None:intergenic
TAGGCGACGGTAGAGGTGGA+GGG 0.621593 4.2:+13449070 None:intergenic
AACCTCAAAATGATTCCCAT+CGG 0.625304 4.2:-13448474 MS.gene059367:CDS
TTACCAGAAGGATGTGGTGG+TGG 0.635353 4.2:+13449180 None:intergenic
TGAACTGTGAAGTGTATAGG+TGG 0.639900 4.2:+13448940 None:intergenic
GAGCTGGGTACGTTACCAGA+AGG 0.640393 4.2:+13449168 None:intergenic
TGGCGATGAAACCATCGTCA+TGG 0.640770 4.2:+13448985 None:intergenic
GGTACGTTACCAGAAGGATG+TGG 0.640781 4.2:+13449174 None:intergenic
GATTGAGGAGGATTAGGCGA+CGG 0.647039 4.2:+13449057 None:intergenic
GAAGTGGTGTTCTCAAGTGG+AGG 0.648671 4.2:-13448190 MS.gene059367:CDS
GTCATGGCCATCGGAGAAGG+GGG 0.657268 4.2:+13449001 None:intergenic
TGGTTATGGATGGATTGAGG+AGG 0.667299 4.2:+13449045 None:intergenic
ACTTCACAGTTCAACACCCG+TGG 0.674976 4.2:-13448930 MS.gene059367:CDS
GTATAGGTGGAAATCAGCGT+CGG 0.675940 4.2:+13448953 None:intergenic
CAATCCAGAGTTTAGCTGAG+CGG 0.681614 4.2:+13448790 None:intergenic
ACGTTACCAGAAGGATGTGG+TGG 0.681851 4.2:+13449177 None:intergenic
CTAAAGGAAGTACTACCGGA+GGG 0.685931 4.2:+13448441 None:intergenic
GCTAAAGGAAGTACTACCGG+AGG 0.721504 4.2:+13448440 None:intergenic
ATAGAGAATATCAAACACTG+TGG 0.766397 4.2:+13448761 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAATCTTGTTGAAAATA+TGG + chr4.2:13448775-13448794 None:intergenic 20.0%
!!! TTTGAGGTAAATAAAAAAGA+AGG + chr4.2:13448727-13448746 None:intergenic 20.0%
! ATTCTCTATTACTACTTTCA+TGG - chr4.2:13448613-13448632 MS.gene059367:CDS 25.0%
! CATTCAATATAGTCATTTGA+AGG + chr4.2:13448961-13448980 None:intergenic 25.0%
! CTTCAAATGACTATATTGAA+TGG - chr4.2:13448959-13448978 MS.gene059367:CDS 25.0%
! GTTGAAATTTAAAGATGAGT+TGG - chr4.2:13449128-13449147 MS.gene059367:CDS 25.0%
!! ACATAAACAACAGAAGATTT+TGG + chr4.2:13448997-13449016 None:intergenic 25.0%
!!! TCTGTTGTTTATGTTTCTTT+TGG - chr4.2:13449003-13449022 MS.gene059367:CDS 25.0%
!!! TTTGGTTTTGGTTATTGATA+TGG + chr4.2:13448648-13448667 None:intergenic 25.0%
!!! TTTTTATTTACCTCAAATCC+TGG - chr4.2:13448730-13448749 MS.gene059367:CDS 25.0%
ATAGAGAATATCAAACACTG+TGG + chr4.2:13448602-13448621 None:intergenic 30.0%
! AAAGATGAGTTGGAAAAGAA+GGG - chr4.2:13449138-13449157 MS.gene059367:CDS 30.0%
! AAGGTGTTTACGAGTATTAT+CGG + chr4.2:13448820-13448839 None:intergenic 30.0%
! TAAAGATGAGTTGGAAAAGA+AGG - chr4.2:13449137-13449156 MS.gene059367:CDS 30.0%
!! ATTCAATGGTAGTTTGGTTT+TGG + chr4.2:13448666-13448685 None:intergenic 30.0%
!! TATAAGATTGGTGATGAAGT+CGG + chr4.2:13448458-13448477 None:intergenic 30.0%
AAAACAAAAGACAAGTCACC+AGG + chr4.2:13448751-13448770 None:intergenic 35.0%
AACCTCAAAATGATTCCCAT+CGG - chr4.2:13448886-13448905 MS.gene059367:CDS 35.0%
AGTCATTTGAAGGTTGCAAT+AGG + chr4.2:13448951-13448970 None:intergenic 35.0%
CAAACTACCATTGAATTACC+AGG - chr4.2:13448670-13448689 MS.gene059367:CDS 35.0%
CTGGTAATTCAATGGTAGTT+TGG + chr4.2:13448672-13448691 None:intergenic 35.0%
GAAAGGTTTGGATTCTTGTT+TGG + chr4.2:13448488-13448507 None:intergenic 35.0%
GAGGTTATGATGAGTATCAA+CGG + chr4.2:13448872-13448891 None:intergenic 35.0%
GGTTCTTTCACATTCTTCTT+TGG - chr4.2:13449191-13449210 MS.gene059367:CDS 35.0%
GTTTACGAGTATTATCGGAT+TGG + chr4.2:13448815-13448834 None:intergenic 35.0%
TGTTGAACTGTGAAGTGTAT+AGG + chr4.2:13448426-13448445 None:intergenic 35.0%
! AAAAAAGAAGGTATGTCACG+TGG + chr4.2:13448715-13448734 None:intergenic 35.0%
! AAGATGAGTTGGAAAAGAAG+GGG - chr4.2:13449139-13449158 MS.gene059367:CDS 35.0%
! ATTGTGGGTTTTCATTCTTG+TGG - chr4.2:13449082-13449101 MS.gene059367:CDS 35.0%
! TTGTGGGTTTTCATTCTTGT+GGG - chr4.2:13449083-13449102 MS.gene059367:CDS 35.0%
! TTTGGCAGAGAGTATAAGAT+TGG + chr4.2:13448470-13448489 None:intergenic 35.0%
!!! TGGTAGTTTGGTTTTGGTTT+TGG + chr4.2:13448660-13448679 None:intergenic 35.0%
AGAATATCAAACACTGTGGC+GGG + chr4.2:13448598-13448617 None:intergenic 40.0%
CAAGTGCGTTGTTGAATTGT+GGG - chr4.2:13449067-13449086 MS.gene059367:CDS 40.0%
CTACACGTTAATGCTTCCTT+GGG - chr4.2:13448519-13448538 MS.gene059367:CDS 40.0%
GAGAATATCAAACACTGTGG+CGG + chr4.2:13448599-13448618 None:intergenic 40.0%
GAGTAAGCAAGTGAAAGGTT+TGG + chr4.2:13448500-13448519 None:intergenic 40.0%
GGTCATGAGAGAAAAAGAAG+AGG - chr4.2:13449104-13449123 MS.gene059367:CDS 40.0%
GTGTAGAGTAAGCAAGTGAA+AGG + chr4.2:13448505-13448524 None:intergenic 40.0%
TCTACACGTTAATGCTTCCT+TGG - chr4.2:13448518-13448537 MS.gene059367:CDS 40.0%
TGAACTGTGAAGTGTATAGG+TGG + chr4.2:13448423-13448442 None:intergenic 40.0%
!! CGTAAACACCTTTGAAGCTT+TGG - chr4.2:13448828-13448847 MS.gene059367:CDS 40.0%
ACCCATTGATATGAGTCGCT+TGG + chr4.2:13448248-13448267 None:intergenic 45.0%
AGAAGGGGAAGATAGTGAAG+TGG - chr4.2:13449154-13449173 MS.gene059367:CDS 45.0%
AGACAAGTCACCAGGATTTG+AGG + chr4.2:13448743-13448762 None:intergenic 45.0%
AGTGAAGTGGTGTTCTCAAG+TGG - chr4.2:13449167-13449186 MS.gene059367:CDS 45.0%
ATTGAAGGGCTGGGTTTATG+TGG + chr4.2:13448222-13448241 None:intergenic 45.0%
CAATCCAGAGTTTAGCTGAG+CGG + chr4.2:13448573-13448592 None:intergenic 45.0%
GAGTCGCTTGGCAAATTGAA+GGG + chr4.2:13448236-13448255 None:intergenic 45.0%
GCAAGTGCGTTGTTGAATTG+TGG - chr4.2:13449066-13449085 MS.gene059367:CDS 45.0%
GCCAAGCGACTCATATCAAT+GGG - chr4.2:13448244-13448263 MS.gene059367:CDS 45.0%
GGGCAATCCTGGTAATTCAA+TGG + chr4.2:13448680-13448699 None:intergenic 45.0%
GTATAGGTGGAAATCAGCGT+CGG + chr4.2:13448410-13448429 None:intergenic 45.0%
TCCGGTAGTACTTCCTTTAG+CGG - chr4.2:13448922-13448941 MS.gene059367:CDS 45.0%
TGAGTCGCTTGGCAAATTGA+AGG + chr4.2:13448237-13448256 None:intergenic 45.0%
TGCCAAGCGACTCATATCAA+TGG - chr4.2:13448243-13448262 MS.gene059367:CDS 45.0%
TTGAATCCACGAGCTACTTG+TGG + chr4.2:13448547-13448566 None:intergenic 45.0%
TTGCAATAGGTCACCGCTAA+AGG + chr4.2:13448938-13448957 None:intergenic 45.0%
! GTCCGATGGGAATCATTTTG+AGG + chr4.2:13448891-13448910 None:intergenic 45.0%
! TTGGAGATGGTGGTTATGGA+TGG + chr4.2:13448328-13448347 None:intergenic 45.0%
!! ACCGCTAAAGGAAGTACTAC+CGG + chr4.2:13448926-13448945 None:intergenic 45.0%
!! CTAAAGGAAGTACTACCGGA+GGG + chr4.2:13448922-13448941 None:intergenic 45.0%
!! TGGATGGATTGAGGAGGATT+AGG + chr4.2:13448312-13448331 None:intergenic 45.0%
!! TGGTGGTTATGGATGGATTG+AGG + chr4.2:13448321-13448340 None:intergenic 45.0%
!! TGGTTATGGATGGATTGAGG+AGG + chr4.2:13448318-13448337 None:intergenic 45.0%
ACGTTACCAGAAGGATGTGG+TGG + chr4.2:13448186-13448205 None:intergenic 50.0%
ACTTCACAGTTCAACACCCG+TGG - chr4.2:13448430-13448449 MS.gene059367:CDS 50.0%
GAAACCATCGTCATGGCCAT+CGG + chr4.2:13448371-13448390 None:intergenic 50.0%
GAAGTGGTGTTCTCAAGTGG+AGG - chr4.2:13449170-13449189 MS.gene059367:CDS 50.0%
GAGGGAATCAATGGTCCGAT+GGG + chr4.2:13448904-13448923 None:intergenic 50.0%
GATAGTGTGAAGGGCAATCC+TGG + chr4.2:13448691-13448710 None:intergenic 50.0%
GATTGAGGAGGATTAGGCGA+CGG + chr4.2:13448306-13448325 None:intergenic 50.0%
GCTTGGCAAATTGAAGGGCT+GGG + chr4.2:13448231-13448250 None:intergenic 50.0%
GGTACGTTACCAGAAGGATG+TGG + chr4.2:13448189-13448208 None:intergenic 50.0%
GGTTATGGAGAGGTTGGAGA+TGG + chr4.2:13448341-13448360 None:intergenic 50.0%
GTACTACCGGAGGGAATCAA+TGG + chr4.2:13448913-13448932 None:intergenic 50.0%
TATGGAGAGGTTGGAGATGG+TGG + chr4.2:13448338-13448357 None:intergenic 50.0%
TCACGTGGCGATAGTGTGAA+GGG + chr4.2:13448700-13448719 None:intergenic 50.0%
TGGCGATGAAACCATCGTCA+TGG + chr4.2:13448378-13448397 None:intergenic 50.0%
TTACCAGAAGGATGTGGTGG+TGG + chr4.2:13448183-13448202 None:intergenic 50.0%
! CTCTGGCTCCAAAGCTTCAA+AGG + chr4.2:13448839-13448858 None:intergenic 50.0%
! GAGGTTGGAGATGGTGGTTA+TGG + chr4.2:13448332-13448351 None:intergenic 50.0%
! GGTTTATGTGGCCTTGAGCT+GGG + chr4.2:13448210-13448229 None:intergenic 50.0%
!! ATCAGCGTCGGTCTTTGTGA+TGG + chr4.2:13448398-13448417 None:intergenic 50.0%
!! ATCGGACCATTGATTCCCTC+CGG - chr4.2:13448904-13448923 MS.gene059367:CDS 50.0%
!! CTTTGAAGCTTTGGAGCCAG+AGG - chr4.2:13448837-13448856 MS.gene059367:CDS 50.0%
!! GCTAAAGGAAGTACTACCGG+AGG + chr4.2:13448923-13448942 None:intergenic 50.0%
ACCTCCGCTCAGCTAAACTC+TGG - chr4.2:13448566-13448585 MS.gene059367:CDS 55.0%
ATCGTCATGGCCATCGGAGA+AGG + chr4.2:13448365-13448384 None:intergenic 55.0%
CGCTTGGCAAATTGAAGGGC+TGG + chr4.2:13448232-13448251 None:intergenic 55.0%
GAAGGGGGTTATGGAGAGGT+TGG + chr4.2:13448347-13448366 None:intergenic 55.0%
GAGCTGGGTACGTTACCAGA+AGG + chr4.2:13448195-13448214 None:intergenic 55.0%
GGAGGGAATCAATGGTCCGA+TGG + chr4.2:13448905-13448924 None:intergenic 55.0%
GTCACGTGGCGATAGTGTGA+AGG + chr4.2:13448701-13448720 None:intergenic 55.0%
TCCAGAGTTTAGCTGAGCGG+AGG + chr4.2:13448570-13448589 None:intergenic 55.0%
TCCATAACCCCCTTCTCCGA+TGG - chr4.2:13448352-13448371 MS.gene059367:CDS 55.0%
TCGTCATGGCCATCGGAGAA+GGG + chr4.2:13448364-13448383 None:intergenic 55.0%
TTCTCCGATGGCCATGACGA+TGG - chr4.2:13448364-13448383 MS.gene059367:CDS 55.0%
! CTGGTAACGTACCCAGCTCA+AGG - chr4.2:13448196-13448215 MS.gene059367:CDS 55.0%
! GGGTTTATGTGGCCTTGAGC+TGG + chr4.2:13448211-13448230 None:intergenic 55.0%
! TGGTGATGAAGTCGGAGCCA+CGG + chr4.2:13448450-13448469 None:intergenic 55.0%
!! AAGGATGTGGTGGTGGTGGT+GGG + chr4.2:13448176-13448195 None:intergenic 55.0%
!! TCAACGGCTCTAAGTGCCTC+TGG + chr4.2:13448856-13448875 None:intergenic 55.0%
CCACCACCACCACATCCTTC+TGG - chr4.2:13448177-13448196 MS.gene059367:CDS 60.0%
CGAGCTACTTGTGGAGCCCA+AGG + chr4.2:13448538-13448557 None:intergenic 60.0%
CGGAGAAGGGGGTTATGGAG+AGG + chr4.2:13448351-13448370 None:intergenic 60.0%
CGGTAGAGGTGGAGGGTGAT+AGG + chr4.2:13448286-13448305 None:intergenic 60.0%
CGTCATGGCCATCGGAGAAG+GGG + chr4.2:13448363-13448382 None:intergenic 60.0%
GCCATCGGAGAAGGGGGTTA+TGG + chr4.2:13448356-13448375 None:intergenic 60.0%
GGAGGATTAGGCGACGGTAG+AGG + chr4.2:13448300-13448319 None:intergenic 60.0%
GGATTAGGCGACGGTAGAGG+TGG + chr4.2:13448297-13448316 None:intergenic 60.0%
GGTGATGAAGTCGGAGCCAC+GGG + chr4.2:13448449-13448468 None:intergenic 60.0%
GTCATGGCCATCGGAGAAGG+GGG + chr4.2:13448362-13448381 None:intergenic 60.0%
TAGGCGACGGTAGAGGTGGA+GGG + chr4.2:13448293-13448312 None:intergenic 60.0%
TGGGCTCCACAAGTAGCTCG+TGG - chr4.2:13448538-13448557 MS.gene059367:CDS 60.0%
TTAGGCGACGGTAGAGGTGG+AGG + chr4.2:13448294-13448313 None:intergenic 60.0%
!! CCAGAAGGATGTGGTGGTGG+TGG + chr4.2:13448180-13448199 None:intergenic 60.0%
!! GAAGGATGTGGTGGTGGTGG+TGG + chr4.2:13448177-13448196 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 13448169 13449213 13448169 ID=MS.gene059367
chr4.2 mRNA 13448169 13449213 13448169 ID=MS.gene059367.t1;Parent=MS.gene059367
chr4.2 exon 13448169 13449213 13448169 ID=MS.gene059367.t1.exon1;Parent=MS.gene059367.t1
chr4.2 CDS 13448169 13449213 13448169 ID=cds.MS.gene059367.t1;Parent=MS.gene059367.t1
Gene Sequence

>MS.gene059367

ATGTCCCACCACCACCACCACATCCTTCTGGTAACGTACCCAGCTCAAGGCCACATAAACCCAGCCCTTCAATTTGCCAAGCGACTCATATCAATGGGTGCACATGTCACTCTTCCTATCACCCTCCACCTCTACCGTCGCCTAATCCTCCTCAATCCATCCATAACCACCATCTCCAACCTCTCCATAACCCCCTTCTCCGATGGCCATGACGATGGTTTCATCGCCATCACAAAGACCGACGCTGATTTCCACCTATACACTTCACAGTTCAACACCCGTGGCTCCGACTTCATCACCAATCTTATACTCTCTGCCAAACAAGAATCCAAACCTTTCACTTGCTTACTCTACACGTTAATGCTTCCTTGGGCTCCACAAGTAGCTCGTGGATTCAACCTCCGCTCAGCTAAACTCTGGATTGAACCCGCCACAGTGTTTGATATTCTCTATTACTACTTTCATGGTTATAGTAACCATATCAATAACCAAAACCAAAACCAAACTACCATTGAATTACCAGGATTGCCCTTCACACTATCGCCACGTGACATACCTTCTTTTTTATTTACCTCAAATCCTGGTGACTTGTCTTTTGTTTTTCCATATTTTCAACAAGATTTTCATGAACTCGATGTTGAAACCAATCCGATAATACTCGTAAACACCTTTGAAGCTTTGGAGCCAGAGGCACTTAGAGCCGTTGATACTCATCATAACCTCAAAATGATTCCCATCGGACCATTGATTCCCTCCGGTAGTACTTCCTTTAGCGGTGACCTATTGCAACCTTCAAATGACTATATTGAATGGTTGAACTCAAAGCCAAAATCTTCTGTTGTTTATGTTTCTTTTGGTAGTTACTTTGTTTTGTCTAAGCGACAAACAGACGAAATTGCAAGTGCGTTGTTGAATTGTGGGTTTTCATTCTTGTGGGTCATGAGAGAAAAAGAAGAGGAGTTGAAATTTAAAGATGAGTTGGAAAAGAAGGGGAAGATAGTGAAGTGGTGTTCTCAAGTGGAGGTTCTTTCACATTCTTCTTTGG

Protein sequence

>MS.gene059367.t1

MSHHHHHILLVTYPAQGHINPALQFAKRLISMGAHVTLPITLHLYRRLILLNPSITTISNLSITPFSDGHDDGFIAITKTDADFHLYTSQFNTRGSDFITNLILSAKQESKPFTCLLYTLMLPWAPQVARGFNLRSAKLWIEPATVFDILYYYFHGYSNHINNQNQNQTTIELPGLPFTLSPRDIPSFLFTSNPGDLSFVFPYFQQDFHELDVETNPIILVNTFEALEPEALRAVDTHHNLKMIPIGPLIPSGSTSFSGDLLQPSNDYIEWLNSKPKSSVVYVSFGSYFVLSKRQTDEIASALLNCGFSFLWVMREKEEELKFKDELEKKGKIVKWCSQVEVLSHSSL