Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33764.t1 | XP_013457081.1 | 93.5 | 459 | 22 | 3 | 1 | 459 | 1 | 451 | 1.40E-242 | 848.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33764.t1 | Q94BX4 | 78.8 | 444 | 82 | 1 | 7 | 450 | 3 | 434 | 5.4e-203 | 708.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33764.t1 | A0A072UN35 | 93.5 | 459 | 22 | 3 | 1 | 459 | 1 | 451 | 1.0e-242 | 848.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052513 | MS.gene33764 | 0.811726 | 6.06E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46611 | MS.gene33764 | PPI |
| MS.gene81658 | MS.gene33764 | PPI |
| MS.gene81660 | MS.gene33764 | PPI |
| MS.gene29768 | MS.gene33764 | PPI |
| MS.gene92674 | MS.gene33764 | PPI |
| MS.gene81663 | MS.gene33764 | PPI |
| MS.gene91851 | MS.gene33764 | PPI |
| MS.gene98540 | MS.gene33764 | PPI |
| MS.gene77885 | MS.gene33764 | PPI |
| MS.gene90626 | MS.gene33764 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33764.t1 | MTR_4g089065 | 93.074 | 462 | 18 | 3 | 1 | 459 | 1 | 451 | 0.0 | 873 |
| MS.gene33764.t1 | MTR_2g095220 | 82.944 | 428 | 63 | 2 | 6 | 433 | 4 | 421 | 0.0 | 731 |
| MS.gene33764.t1 | MTR_2g095220 | 83.709 | 399 | 55 | 2 | 6 | 404 | 4 | 392 | 0.0 | 681 |
| MS.gene33764.t1 | MTR_2g095220 | 82.769 | 325 | 46 | 2 | 6 | 330 | 4 | 318 | 0.0 | 543 |
| MS.gene33764.t1 | MTR_2g047140 | 90.000 | 70 | 7 | 0 | 44 | 113 | 140 | 209 | 6.65e-36 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33764.t1 | AT3G45100 | 78.829 | 444 | 82 | 1 | 7 | 450 | 3 | 434 | 0.0 | 708 |
| MS.gene33764.t1 | AT3G45100 | 78.829 | 444 | 82 | 1 | 7 | 450 | 3 | 434 | 0.0 | 708 |
| MS.gene33764.t1 | AT3G45100 | 78.829 | 444 | 82 | 1 | 7 | 450 | 3 | 434 | 0.0 | 708 |
| MS.gene33764.t1 | AT1G73160 | 26.648 | 364 | 218 | 12 | 25 | 360 | 98 | 440 | 6.60e-19 | 89.7 |
Find 109 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAGAATAGTTCTTATAAT+TGG | 0.157108 | 4.4:+23644773 | None:intergenic |
| TTGAAGGTTCGTTTCATTAT+TGG | 0.197372 | 4.4:-23643784 | MS.gene33764:intron |
| GTCCGGTCTGTTCTAATAAA+AGG | 0.197526 | 4.4:-23643664 | MS.gene33764:CDS |
| GCAGCATAGTTATCGCCTTC+TGG | 0.281379 | 4.4:+23641601 | None:intergenic |
| TGAAAAGCATTCGATTCTTA+TGG | 0.288138 | 4.4:-23645370 | MS.gene33764:CDS |
| GGCGGAGGCGGAGGCGGAGG+AGG | 0.302269 | 4.4:-23644435 | MS.gene33764:CDS |
| GGATGCAATCGACACACTTC+TGG | 0.311306 | 4.4:+23644323 | None:intergenic |
| AACACATTTCCAACTTTGTA+TGG | 0.315745 | 4.4:-23644803 | MS.gene33764:CDS |
| GCCTCCGACACTGGCTTAAA+TGG | 0.316977 | 4.4:+23644455 | None:intergenic |
| CAAGCAAGTCGGCTCCTTTA+CGG | 0.323790 | 4.4:+23644357 | None:intergenic |
| ATATACAATTTCGGTCCTTT+TGG | 0.324635 | 4.4:+23641432 | None:intergenic |
| TCGCCCAACCGTGATGGATT+TGG | 0.347022 | 4.4:-23640821 | MS.gene33764:CDS |
| CAAGATCGAGTTGGTTTGTT+GGG | 0.351826 | 4.4:-23643706 | MS.gene33764:CDS |
| ACAACTAGCAGCCTCTAATA+TGG | 0.367430 | 4.4:+23641890 | None:intergenic |
| TCCGCCTCCGCCTCCGACAC+TGG | 0.369391 | 4.4:+23644446 | None:intergenic |
| GGAGGCGGAGGCGGAGGCGG+AGG | 0.372171 | 4.4:-23644438 | MS.gene33764:CDS |
| TTGGCAGTGTCAACAGCATT+AGG | 0.387563 | 4.4:+23644485 | None:intergenic |
| TCCTCCAACCGTACACGTTT+AGG | 0.399496 | 4.4:+23643751 | None:intergenic |
| GTCGGAGGCGGAGGCGGAGG+CGG | 0.401289 | 4.4:-23644441 | MS.gene33764:CDS |
| AGCACGATCATATACAATTT+CGG | 0.403550 | 4.4:+23641423 | None:intergenic |
| GCCAGTGTCGGAGGCGGAGG+CGG | 0.403742 | 4.4:-23644447 | MS.gene33764:CDS |
| AACCTTCTCCGGCGCCAAAC+CGG | 0.405406 | 4.4:+23644517 | None:intergenic |
| TGAGAATAGTTCTTATAATT+GGG | 0.413206 | 4.4:+23644774 | None:intergenic |
| ACCAGATGATATGATTGTTT+TGG | 0.414859 | 4.4:-23641658 | MS.gene33764:CDS |
| TTTACTGATCATTCCTTGAA+TGG | 0.415081 | 4.4:-23644653 | MS.gene33764:CDS |
| GTCCGGTTTGGCGCCGGAGA+AGG | 0.430100 | 4.4:-23644519 | MS.gene33764:CDS |
| CCATGATTCTAGCATGCATA+AGG | 0.430190 | 4.4:+23644690 | None:intergenic |
| GACACCTCTCTTGCGGAGCA+TGG | 0.430975 | 4.4:-23641040 | MS.gene33764:CDS |
| CATGCTTATGGAAAACGCTC+TGG | 0.432407 | 4.4:-23644890 | MS.gene33764:CDS |
| AGTGTCGGAGGCGGAGGCGG+AGG | 0.432443 | 4.4:-23644444 | MS.gene33764:CDS |
| CGTTTCATTATTGGAGGTGA+TGG | 0.435650 | 4.4:-23643775 | MS.gene33764:CDS |
| CTCTCTTGCGGAGCATGGGC+AGG | 0.437196 | 4.4:-23641035 | MS.gene33764:CDS |
| TACCTTGGCAGATGTGAGTC+AGG | 0.451847 | 4.4:-23644585 | MS.gene33764:CDS |
| AGCGTCACTAAAACCATTCA+AGG | 0.453939 | 4.4:+23644640 | None:intergenic |
| GCCAAAACAATCATATCATC+TGG | 0.465468 | 4.4:+23641657 | None:intergenic |
| TCAAGATCGAGTTGGTTTGT+TGG | 0.467716 | 4.4:-23643707 | MS.gene33764:CDS |
| CCTTATGCATGCTAGAATCA+TGG | 0.471659 | 4.4:-23644690 | MS.gene33764:CDS |
| TTTGAGGTCCGGTTTGGCGC+CGG | 0.472709 | 4.4:-23644525 | MS.gene33764:CDS |
| TAAGCCAGTGTCGGAGGCGG+AGG | 0.475197 | 4.4:-23644450 | MS.gene33764:CDS |
| CTCGTGACAAAGTGTTGAAA+AGG | 0.478014 | 4.4:+23644715 | None:intergenic |
| TTCTCGACACCACCAACGTT+GGG | 0.478477 | 4.4:+23645330 | None:intergenic |
| ATGCTTATGGAAAACGCTCT+GGG | 0.482017 | 4.4:-23644889 | MS.gene33764:CDS |
| TATTGTTGTTATCAGTCGAT+TGG | 0.482179 | 4.4:-23644384 | MS.gene33764:CDS |
| CCCTCCAAATCCATCACGGT+TGG | 0.485277 | 4.4:+23640817 | None:intergenic |
| AGAACCTGATCCAAGTGATA+TGG | 0.488416 | 4.4:-23641634 | MS.gene33764:CDS |
| GTGGTTGTAACTCATGCTTA+TGG | 0.491032 | 4.4:-23644902 | MS.gene33764:CDS |
| TCCGGTCTGTTCTAATAAAA+GGG | 0.494942 | 4.4:-23643663 | MS.gene33764:CDS |
| AGTCGATTGGTTTACCGTAA+AGG | 0.496026 | 4.4:-23644371 | MS.gene33764:CDS |
| AAGGTTCGTTTCATTATTGG+AGG | 0.502256 | 4.4:-23643781 | MS.gene33764:CDS |
| CCTTGTGGCCTAAGTTGAGC+AGG | 0.506293 | 4.4:+23645283 | None:intergenic |
| TCTCAATGCCTGCTCAACTT+AGG | 0.508173 | 4.4:-23645291 | MS.gene33764:CDS |
| TTAGCCTGCTGATGATATTG+AGG | 0.508216 | 4.4:-23640864 | MS.gene33764:intron |
| ATTCTCTCGCCCAACCGTGA+TGG | 0.508522 | 4.4:-23640827 | MS.gene33764:CDS |
| TGGCTTAAATGGCTTAAACT+TGG | 0.511102 | 4.4:+23644466 | None:intergenic |
| CGCACCATATCACTTGGATC+AGG | 0.514256 | 4.4:+23641630 | None:intergenic |
| ATGTGTTTCTCATACAAGTA+AGG | 0.514270 | 4.4:-23644558 | MS.gene33764:CDS |
| CCCAACCGTGATGGATTTGG+AGG | 0.514955 | 4.4:-23640818 | MS.gene33764:CDS |
| TGCTAGAATCATGGGATACA+AGG | 0.515986 | 4.4:-23644681 | MS.gene33764:CDS |
| CCTCCAAATCCATCACGGTT+GGG | 0.516370 | 4.4:+23640818 | None:intergenic |
| TAAAAGTCTACTATGTTCCA+TGG | 0.517005 | 4.4:-23644844 | MS.gene33764:CDS |
| ATATTAGAGGCTGCTAGTTG+TGG | 0.519552 | 4.4:-23641888 | MS.gene33764:CDS |
| CATTCTCTTCAAGATCGAGT+TGG | 0.519737 | 4.4:-23643715 | MS.gene33764:CDS |
| CTGCCCATGCTCCGCAAGAG+AGG | 0.520071 | 4.4:+23641036 | None:intergenic |
| GGGAGTGTTCCATACAAAGT+TGG | 0.520624 | 4.4:+23644794 | None:intergenic |
| GCCTCCTCAATATCATCAGC+AGG | 0.523174 | 4.4:+23640860 | None:intergenic |
| ACACCTCTCTTGCGGAGCAT+GGG | 0.525914 | 4.4:-23641039 | MS.gene33764:CDS |
| GCCATTTAAGCCAGTGTCGG+AGG | 0.528866 | 4.4:-23644456 | MS.gene33764:CDS |
| CATGATTCTAGCATGCATAA+GGG | 0.530621 | 4.4:+23644691 | None:intergenic |
| CTTATGCATGCTAGAATCAT+GGG | 0.543612 | 4.4:-23644689 | MS.gene33764:CDS |
| ACCTAAACGTGTACGGTTGG+AGG | 0.551551 | 4.4:-23643752 | MS.gene33764:CDS |
| GCGTATATTGGAGCTATGGC+AGG | 0.555266 | 4.4:-23640970 | MS.gene33764:intron |
| GCTGGCATGATGTTGCCAAA+AGG | 0.559543 | 4.4:-23641447 | MS.gene33764:CDS |
| TATGGCGTATATTGGAGCTA+TGG | 0.563402 | 4.4:-23640974 | MS.gene33764:CDS |
| TGATTAAAGAATGGTCTCCA+TGG | 0.563439 | 4.4:+23644827 | None:intergenic |
| GAAAGAATTACCGTTGTGCA+TGG | 0.568216 | 4.4:-23644746 | MS.gene33764:CDS |
| CTGTACAACATACAGATGTC+CGG | 0.570521 | 4.4:-23643681 | MS.gene33764:CDS |
| TGATGATATTGAGGAGGCGC+CGG | 0.576740 | 4.4:-23640855 | MS.gene33764:CDS |
| TTGGGCGAGAGAATGAAATC+CGG | 0.582564 | 4.4:+23640836 | None:intergenic |
| ACTCGATTGTGCATGACTTG+AGG | 0.587904 | 4.4:+23641567 | None:intergenic |
| TAAGCCATTTAAGCCAGTGT+CGG | 0.590717 | 4.4:-23644459 | MS.gene33764:CDS |
| AGATGAGGGAACTCTATAGC+TGG | 0.592152 | 4.4:-23641465 | MS.gene33764:CDS |
| ATTGCGCGCACCATATCACT+TGG | 0.596121 | 4.4:+23641624 | None:intergenic |
| ATTTAAGCCAGTGTCGGAGG+CGG | 0.597549 | 4.4:-23644453 | MS.gene33764:CDS |
| TGGACCTAAACGTGTACGGT+TGG | 0.605008 | 4.4:-23643755 | MS.gene33764:CDS |
| ACAATTTCCGATCCGCTAGG+AGG | 0.612287 | 4.4:+23644407 | None:intergenic |
| CCTGCTCAACTTAGGCCACA+AGG | 0.612330 | 4.4:-23645283 | MS.gene33764:intron |
| TATGGTGCGCGCAATCCAGA+AGG | 0.612446 | 4.4:-23641616 | MS.gene33764:CDS |
| GTGATGGACCTAAACGTGTA+CGG | 0.614142 | 4.4:-23643759 | MS.gene33764:CDS |
| AATGTGTTCTGATTAAAGAA+TGG | 0.616415 | 4.4:+23644818 | None:intergenic |
| AGTTGAGCAGGCATTGAGAG+AGG | 0.618386 | 4.4:+23645295 | None:intergenic |
| ATAACAATTTCCGATCCGCT+AGG | 0.619141 | 4.4:+23644404 | None:intergenic |
| ATCTACTTGAACGACTCTCA+CGG | 0.623084 | 4.4:-23641381 | MS.gene33764:intron |
| GGAGCGTCCTCCTAGCGGAT+CGG | 0.629974 | 4.4:-23644414 | MS.gene33764:CDS |
| AGCCTGACTCACATCTGCCA+AGG | 0.635692 | 4.4:+23644583 | None:intergenic |
| ATTCTCGACACCACCAACGT+TGG | 0.636477 | 4.4:+23645329 | None:intergenic |
| GCCTGCTGATGATATTGAGG+AGG | 0.642745 | 4.4:-23640861 | MS.gene33764:CDS |
| TCTGGGGTCAGATACATGAC+AGG | 0.646517 | 4.4:-23644872 | MS.gene33764:CDS |
| ACGCGTCGGAGGTGTTCCTG+AGG | 0.652194 | 4.4:-23641847 | MS.gene33764:intron |
| CCAACCGTGATGGATTTGGA+GGG | 0.655955 | 4.4:-23640817 | MS.gene33764:CDS |
| TCATACAAGTAAGGAGAACA+CGG | 0.658070 | 4.4:-23644549 | MS.gene33764:CDS |
| ACAGTTAGCACACGCGTCGG+AGG | 0.658214 | 4.4:-23641858 | MS.gene33764:CDS |
| TGCTTATGGAAAACGCTCTG+GGG | 0.662549 | 4.4:-23644888 | MS.gene33764:CDS |
| TGGAAGTATTCACATGAACA+AGG | 0.662841 | 4.4:-23644618 | MS.gene33764:CDS |
| GAGGAGGAGCGTCCTCCTAG+CGG | 0.667739 | 4.4:-23644419 | MS.gene33764:CDS |
| AATGACTTCAACAAGCAAGT+CGG | 0.671637 | 4.4:+23644346 | None:intergenic |
| ACATCCCTCCAAATCCATCA+CGG | 0.683561 | 4.4:+23640813 | None:intergenic |
| GGGGTCAGATACATGACAGG+TGG | 0.683959 | 4.4:-23644869 | MS.gene33764:CDS |
| TTAACAGTTAGCACACGCGT+CGG | 0.711950 | 4.4:-23641861 | MS.gene33764:CDS |
| GGTTTGATGTCCATGCACAA+CGG | 0.712542 | 4.4:+23644736 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATTTATGATATAAG+TGG | + | chr4.4:23640986-23641005 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAAAAAAAACC+TGG | - | chr4.4:23644081-23644100 | MS.gene33764:intron | 10.0% |
| !! | TCTAAAAATTACAATTTATT+TGG | + | chr4.4:23642315-23642334 | None:intergenic | 10.0% |
| !!! | AAATTGTAATTTTTAGAATT+TGG | - | chr4.4:23642318-23642337 | MS.gene33764:intron | 10.0% |
| !!! | TTATTAATTTGAAGATATTA+AGG | - | chr4.4:23643515-23643534 | MS.gene33764:intron | 10.0% |
| !!! | TTTTTTTTTTTTTAATGGTT+GGG | + | chr4.4:23644075-23644094 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTAATGGT+TGG | + | chr4.4:23644076-23644095 | None:intergenic | 10.0% |
| !! | CACAATATTTATATGATTAT+TGG | - | chr4.4:23642223-23642242 | MS.gene33764:intron | 15.0% |
| !! | TGTGAAAATGAATATTAAAA+GGG | + | chr4.4:23642207-23642226 | None:intergenic | 15.0% |
| !! | TTGTGAAAATGAATATTAAA+AGG | + | chr4.4:23642208-23642227 | None:intergenic | 15.0% |
| !!! | AATTTTTTGCTTCAAATATA+AGG | - | chr4.4:23642759-23642778 | MS.gene33764:intron | 15.0% |
| !!! | ATATTTGAAGCAAAAAATTA+AGG | + | chr4.4:23642758-23642777 | None:intergenic | 15.0% |
| !!! | ATTATTCAAAATTTTGAAGT+CGG | - | chr4.4:23642106-23642125 | MS.gene33764:intron | 15.0% |
| !!! | ATTTTTTGCTTCAAATATAA+GGG | - | chr4.4:23642760-23642779 | MS.gene33764:intron | 15.0% |
| !!! | CATAGTTATTAAGTTTTATT+CGG | + | chr4.4:23643801-23643820 | None:intergenic | 15.0% |
| !!! | GATATTATTTATTTTGTATC+TGG | - | chr4.4:23644200-23644219 | MS.gene33764:intron | 15.0% |
| !!! | TTTCTTTCTTTTAAGTTTTA+TGG | - | chr4.4:23642571-23642590 | MS.gene33764:intron | 15.0% |
| !!! | TTTTTCTCAAAAAAAAAAAG+AGG | - | chr4.4:23643928-23643947 | MS.gene33764:intron | 15.0% |
| !! | AACTAATACCTAATGAATTA+AGG | - | chr4.4:23645048-23645067 | MS.gene33764:intron | 20.0% |
| !! | AAGAATAGAAAAAATACTTG+TGG | + | chr4.4:23644353-23644372 | None:intergenic | 20.0% |
| !! | AAGAATTATATCTCTTGAAA+AGG | - | chr4.4:23641093-23641112 | MS.gene33764:intron | 20.0% |
| !! | AATAGAATCAAGTGAAATAA+TGG | - | chr4.4:23642289-23642308 | MS.gene33764:intron | 20.0% |
| !! | AGAATATATTGCAAAAAAAG+TGG | + | chr4.4:23642053-23642072 | None:intergenic | 20.0% |
| !! | AGGTTCAATATAATTCTAAT+AGG | - | chr4.4:23644823-23644842 | MS.gene33764:CDS | 20.0% |
| !! | ATGCTATTAATTCTCATAAA+AGG | - | chr4.4:23643900-23643919 | MS.gene33764:intron | 20.0% |
| !! | TCAAAGATAAACTACATAAA+AGG | + | chr4.4:23644392-23644411 | None:intergenic | 20.0% |
| !! | TGAGAATAGTTCTTATAATT+GGG | + | chr4.4:23641397-23641416 | None:intergenic | 20.0% |
| !! | TGCTATTAATTCTCATAAAA+GGG | - | chr4.4:23643901-23643920 | MS.gene33764:intron | 20.0% |
| !! | TTAATTCTTCTTTAGTTGTT+GGG | - | chr4.4:23642724-23642743 | MS.gene33764:intron | 20.0% |
| !! | TTATAGTTAATAACAGCAAT+AGG | + | chr4.4:23643189-23643208 | None:intergenic | 20.0% |
| !! | TTATTTCACTTGATTCTATT+AGG | + | chr4.4:23642289-23642308 | None:intergenic | 20.0% |
| !!! | AAATTTTGAATAATGCAAAG+AGG | + | chr4.4:23642100-23642119 | None:intergenic | 20.0% |
| !!! | AGCGTTGTAATTTTTTTTTT+TGG | + | chr4.4:23643750-23643769 | None:intergenic | 20.0% |
| ! | AAATGTAATTACCAATGATC+AGG | - | chr4.4:23641241-23641260 | MS.gene33764:intron | 25.0% |
| ! | AACAATTCAACAGTTATTAC+GGG | + | chr4.4:23643323-23643342 | None:intergenic | 25.0% |
| ! | AATGTGTTCTGATTAAAGAA+TGG | + | chr4.4:23641353-23641372 | None:intergenic | 25.0% |
| ! | AGTTGTAAAATAAAATCCAC+TGG | - | chr4.4:23644853-23644872 | MS.gene33764:CDS | 25.0% |
| ! | ATAACTATTCTATAAACCCA+GGG | - | chr4.4:23643128-23643147 | MS.gene33764:intron | 25.0% |
| ! | ATTAATTTAACAAATCCCCT+GGG | + | chr4.4:23643147-23643166 | None:intergenic | 25.0% |
| ! | CAACAATTCAACAGTTATTA+CGG | + | chr4.4:23643324-23643343 | None:intergenic | 25.0% |
| ! | CTTAATAACTATGCATGAAT+AGG | - | chr4.4:23643808-23643827 | MS.gene33764:intron | 25.0% |
| ! | CTTAATTCTTCTTTAGTTGT+TGG | - | chr4.4:23642723-23642742 | MS.gene33764:intron | 25.0% |
| ! | GACATAATGGTATTAACTTA+TGG | - | chr4.4:23641936-23641955 | MS.gene33764:intron | 25.0% |
| ! | GTGAGAATAGTTCTTATAAT+TGG | + | chr4.4:23641398-23641417 | None:intergenic | 25.0% |
| ! | GTGCAAAATGATTAATTCTT+TGG | + | chr4.4:23641130-23641149 | None:intergenic | 25.0% |
| ! | TATACAAAAAGCTTCTGTTA+AGG | + | chr4.4:23644257-23644276 | None:intergenic | 25.0% |
| ! | TCACTATTATACAACATTTC+TGG | - | chr4.4:23642684-23642703 | MS.gene33764:intron | 25.0% |
| ! | TGTAAGTTCCTTAATTCATT+AGG | + | chr4.4:23645059-23645078 | None:intergenic | 25.0% |
| ! | TGTTGTATAATAGTGAATCT+CGG | + | chr4.4:23642680-23642699 | None:intergenic | 25.0% |
| ! | TTTCTCAAAAAACAAAGGTA+CGG | - | chr4.4:23643635-23643654 | MS.gene33764:intron | 25.0% |
| !! | AAGAAATAAAGAACTTTTCC+AGG | + | chr4.4:23642557-23642576 | None:intergenic | 25.0% |
| !! | AGTAGTAAAACAGTGTATTT+TGG | - | chr4.4:23644959-23644978 | MS.gene33764:intron | 25.0% |
| !! | ATCTAGATTTTTGTCTAATG+TGG | - | chr4.4:23641914-23641933 | MS.gene33764:CDS | 25.0% |
| !! | CATATTTTCTTAAACAGGTT+TGG | - | chr4.4:23642528-23642547 | MS.gene33764:intron | 25.0% |
| !! | GAGTAACATCTTTAAGAAAA+AGG | - | chr4.4:23642915-23642934 | MS.gene33764:intron | 25.0% |
| !! | GATTAAAGAATTTTATGCTC+AGG | + | chr4.4:23644918-23644937 | None:intergenic | 25.0% |
| !! | GTAGTAAAACAGTGTATTTT+GGG | - | chr4.4:23644960-23644979 | MS.gene33764:intron | 25.0% |
| !! | GTTTTTATCCATCCTTTATA+TGG | - | chr4.4:23643002-23643021 | MS.gene33764:intron | 25.0% |
| !! | TAACATCTTTAAGAAAAAGG+AGG | - | chr4.4:23642918-23642937 | MS.gene33764:intron | 25.0% |
| !! | TCTTGTCAATTCCAATATTT+TGG | - | chr4.4:23644436-23644455 | MS.gene33764:CDS | 25.0% |
| !! | TTTTTGTATAGCCATATTAG+AGG | - | chr4.4:23644267-23644286 | MS.gene33764:intron | 25.0% |
| !!! | AATTCCAATATTTTGGACTA+CGG | - | chr4.4:23644443-23644462 | MS.gene33764:CDS | 25.0% |
| !!! | GGTACTTTAGTTTTTCAATT+TGG | + | chr4.4:23643780-23643799 | None:intergenic | 25.0% |
| !!! | TGATCTTCAGTTTTTTGTTA+TGG | - | chr4.4:23645176-23645195 | MS.gene33764:intron | 25.0% |
| !!! | TGTTTATTTTCTGTAGATGA+GGG | - | chr4.4:23644689-23644708 | MS.gene33764:CDS | 25.0% |
| !!! | TTATCATTTTTCACCATTCT+AGG | - | chr4.4:23640915-23640934 | MS.gene33764:intron | 25.0% |
| !!! | TTTTTTGTTATGGCGTATAT+TGG | - | chr4.4:23645186-23645205 | MS.gene33764:intron | 25.0% |
| !!! | TTTTTTTTAATGGTTGGGTA+CGG | + | chr4.4:23644070-23644089 | None:intergenic | 25.0% |
| AAAAAAAAAGAGGATATGCG+TGG | - | chr4.4:23643938-23643957 | MS.gene33764:intron | 30.0% | |
| AAAACAAGCCAACTTACATT+AGG | + | chr4.4:23641869-23641888 | None:intergenic | 30.0% | |
| AACACATTTCCAACTTTGTA+TGG | - | chr4.4:23641365-23641384 | MS.gene33764:intron | 30.0% | |
| AACTTATGTATCCCATTTGA+AGG | - | chr4.4:23642368-23642387 | MS.gene33764:intron | 30.0% | |
| AATGAAACGAACCTTCAAAT+GGG | + | chr4.4:23642382-23642401 | None:intergenic | 30.0% | |
| ACAATTCAACAGTTATTACG+GGG | + | chr4.4:23643322-23643341 | None:intergenic | 30.0% | |
| AGCACGATCATATACAATTT+CGG | + | chr4.4:23644748-23644767 | None:intergenic | 30.0% | |
| AGTGGTTAAAGCAGTATATA+AGG | + | chr4.4:23640968-23640987 | None:intergenic | 30.0% | |
| ATAACGCGGTATAAGAAATT+TGG | - | chr4.4:23641891-23641910 | MS.gene33764:CDS | 30.0% | |
| ATGCAGAAAATCAGAAGAAT+AGG | - | chr4.4:23645394-23645413 | MS.gene33764:CDS | 30.0% | |
| ATGTGTTTCTCATACAAGTA+AGG | - | chr4.4:23641610-23641629 | MS.gene33764:CDS | 30.0% | |
| CAGATATTGAATGTTTGAAG+TGG | + | chr4.4:23643450-23643469 | None:intergenic | 30.0% | |
| CATTAATTTAACAAATCCCC+TGG | + | chr4.4:23643148-23643167 | None:intergenic | 30.0% | |
| CTGATGAAAGCAAAAGAAAA+GGG | + | chr4.4:23644646-23644665 | None:intergenic | 30.0% | |
| GATAACTATTCTATAAACCC+AGG | - | chr4.4:23643127-23643146 | MS.gene33764:intron | 30.0% | |
| GTTGTATAATAGTGAATCTC+GGG | + | chr4.4:23642679-23642698 | None:intergenic | 30.0% | |
| TAAAAGTCTACTATGTTCCA+TGG | - | chr4.4:23641324-23641343 | MS.gene33764:intron | 30.0% | |
| TAAATGTAGCTAAGGTAGAA+AGG | - | chr4.4:23643387-23643406 | MS.gene33764:intron | 30.0% | |
| TAACTATTCTATAAACCCAG+GGG | - | chr4.4:23643129-23643148 | MS.gene33764:intron | 30.0% | |
| TAATGAAACGAACCTTCAAA+TGG | + | chr4.4:23642383-23642402 | None:intergenic | 30.0% | |
| TAGATTCACTTCCTTACTAT+AGG | - | chr4.4:23644483-23644502 | MS.gene33764:CDS | 30.0% | |
| TATAAGGTGAAATAAGTGAG+TGG | + | chr4.4:23640952-23640971 | None:intergenic | 30.0% | |
| TCATACTACTTTAGATCAAC+AGG | - | chr4.4:23643073-23643092 | MS.gene33764:intron | 30.0% | |
| TGAATAATGCAAAGAGGTTA+AGG | + | chr4.4:23642094-23642113 | None:intergenic | 30.0% | |
| TTAAGGTTCAAATAGAAGAC+AGG | + | chr4.4:23642077-23642096 | None:intergenic | 30.0% | |
| TTAGATCAACAGGTACTTTA+GGG | - | chr4.4:23643083-23643102 | MS.gene33764:intron | 30.0% | |
| TTGAAGGTTCGTTTCATTAT+TGG | - | chr4.4:23642384-23642403 | MS.gene33764:intron | 30.0% | |
| TTTACTGATCATTCCTTGAA+TGG | - | chr4.4:23641515-23641534 | MS.gene33764:intron | 30.0% | |
| TTTAGATCAACAGGTACTTT+AGG | - | chr4.4:23643082-23643101 | MS.gene33764:intron | 30.0% | |
| TTTGTCTAATGTGGACATAA+TGG | - | chr4.4:23641923-23641942 | MS.gene33764:intron | 30.0% | |
| ! | AACTTTAGCAATCCTTTTTC+TGG | - | chr4.4:23645005-23645024 | MS.gene33764:intron | 30.0% |
| ! | AATGATAATGTGATACCTTG+TGG | + | chr4.4:23640903-23640922 | None:intergenic | 30.0% |
| ! | ACCAGATGATATGATTGTTT+TGG | - | chr4.4:23644510-23644529 | MS.gene33764:CDS | 30.0% |
| ! | ATATACAATTTCGGTCCTTT+TGG | + | chr4.4:23644739-23644758 | None:intergenic | 30.0% |
| ! | ATGACTTGAGGATCAATTTT+AGG | + | chr4.4:23644592-23644611 | None:intergenic | 30.0% |
| ! | TATTGTTGTTATCAGTCGAT+TGG | - | chr4.4:23641784-23641803 | MS.gene33764:intron | 30.0% |
| ! | TCCATTTTCTCCAAAAAAAG+AGG | - | chr4.4:23644007-23644026 | MS.gene33764:intron | 30.0% |
| ! | TTCTCAAAAAACAAAGGTAC+GGG | - | chr4.4:23643636-23643655 | MS.gene33764:intron | 30.0% |
| ! | TTCTGATTTTCTGCATTGTT+GGG | + | chr4.4:23645390-23645409 | None:intergenic | 30.0% |
| !! | AAGGGCATATTTTCTTAAAC+AGG | - | chr4.4:23642523-23642542 | MS.gene33764:intron | 30.0% |
| !! | CTGTTTATTTTCTGTAGATG+AGG | - | chr4.4:23644688-23644707 | MS.gene33764:CDS | 30.0% |
| !! | GATAATGAAGCCATTTTAAG+TGG | - | chr4.4:23642784-23642803 | MS.gene33764:intron | 30.0% |
| !! | TAGTCATTTTACTGAAGATG+AGG | + | chr4.4:23643874-23643893 | None:intergenic | 30.0% |
| !! | TGAAAAGCATTCGATTCTTA+TGG | - | chr4.4:23640798-23640817 | MS.gene33764:CDS | 30.0% |
| !!! | GTACGTTTATCCTCTTTTTT+TGG | + | chr4.4:23644020-23644039 | None:intergenic | 30.0% |
| !!! | TCCTCTTTTTTTGGAGAAAA+TGG | + | chr4.4:23644011-23644030 | None:intergenic | 30.0% |
| AAAAAAAACCTGGTGCTTCA+TGG | - | chr4.4:23644091-23644110 | MS.gene33764:intron | 35.0% | |
| AAAAAAACCTGGTGCTTCAT+GGG | - | chr4.4:23644092-23644111 | MS.gene33764:intron | 35.0% | |
| AAAAGGCAAATCATTCCAAG+AGG | + | chr4.4:23641965-23641984 | None:intergenic | 35.0% | |
| AAAGGCAAATCATTCCAAGA+GGG | + | chr4.4:23641964-23641983 | None:intergenic | 35.0% | |
| AAATGAAACAGAATGACCAG+TGG | + | chr4.4:23644872-23644891 | None:intergenic | 35.0% | |
| AAGGTTCGTTTCATTATTGG+AGG | - | chr4.4:23642387-23642406 | MS.gene33764:intron | 35.0% | |
| AATAGTGATATCGACACAGT+TGG | + | chr4.4:23643846-23643865 | None:intergenic | 35.0% | |
| AATCTGCTTGTAACTTAAGC+TGG | - | chr4.4:23644934-23644953 | MS.gene33764:intron | 35.0% | |
| AATGACTTCAACAAGCAAGT+CGG | + | chr4.4:23641825-23641844 | None:intergenic | 35.0% | |
| ACAGTTATTACGGGGTTATT+TGG | + | chr4.4:23643314-23643333 | None:intergenic | 35.0% | |
| ACCAAGGATACATAAGCAAA+AGG | + | chr4.4:23643364-23643383 | None:intergenic | 35.0% | |
| ACTCTCAACCATATAAAGGA+TGG | + | chr4.4:23643013-23643032 | None:intergenic | 35.0% | |
| ATAACTTATTGTGCTGTCTG+AGG | - | chr4.4:23641190-23641209 | MS.gene33764:intron | 35.0% | |
| ATCTGGTACAACCTATAGTA+AGG | + | chr4.4:23644497-23644516 | None:intergenic | 35.0% | |
| ATGACCGTAGTCCAAAATAT+TGG | + | chr4.4:23644450-23644469 | None:intergenic | 35.0% | |
| ATTATCCAAACAGAGCCTTA+GGG | - | chr4.4:23641033-23641052 | MS.gene33764:CDS | 35.0% | |
| CAGTTATTACGGGGTTATTT+GGG | + | chr4.4:23643313-23643332 | None:intergenic | 35.0% | |
| CATCACTCTCAACCATATAA+AGG | + | chr4.4:23643017-23643036 | None:intergenic | 35.0% | |
| CATGATTCTAGCATGCATAA+GGG | + | chr4.4:23641480-23641499 | None:intergenic | 35.0% | |
| CCTGATGAAAGCAAAAGAAA+AGG | + | chr4.4:23644647-23644666 | None:intergenic | 35.0% | |
| CGGCATTTCTCAAAAAACAA+AGG | - | chr4.4:23643630-23643649 | MS.gene33764:intron | 35.0% | |
| CTTATGCATGCTAGAATCAT+GGG | - | chr4.4:23641479-23641498 | MS.gene33764:intron | 35.0% | |
| GAACTTCTTGTACCAGAAAA+AGG | + | chr4.4:23645020-23645039 | None:intergenic | 35.0% | |
| GATTGCATCCTAATGTAAGT+TGG | - | chr4.4:23641858-23641877 | MS.gene33764:CDS | 35.0% | |
| GCCAAAACAATCATATCATC+TGG | + | chr4.4:23644514-23644533 | None:intergenic | 35.0% | |
| GGAATTAAGTAGACCTAGAA+TGG | + | chr4.4:23640931-23640950 | None:intergenic | 35.0% | |
| GGAATTACAAAAACCTTCTC+CGG | + | chr4.4:23641665-23641684 | None:intergenic | 35.0% | |
| GTATGATAGATGAGAACAGT+TGG | + | chr4.4:23642878-23642897 | None:intergenic | 35.0% | |
| TCATACAAGTAAGGAGAACA+CGG | - | chr4.4:23641619-23641638 | MS.gene33764:CDS | 35.0% | |
| TCCGGTCTGTTCTAATAAAA+GGG | - | chr4.4:23642505-23642524 | MS.gene33764:intron | 35.0% | |
| TGATTAAAGAATGGTCTCCA+TGG | + | chr4.4:23641344-23641363 | None:intergenic | 35.0% | |
| TGGCTTAAATGGCTTAAACT+TGG | + | chr4.4:23641705-23641724 | None:intergenic | 35.0% | |
| TGTAATTACCAATGATCAGG+TGG | - | chr4.4:23641244-23641263 | MS.gene33764:intron | 35.0% | |
| TTAGCTACATTTACCAACCA+AGG | + | chr4.4:23643380-23643399 | None:intergenic | 35.0% | |
| TTCTATTAGGCTCCTACATA+AGG | + | chr4.4:23642276-23642295 | None:intergenic | 35.0% | |
| TTTGCTTATGTATCCTTGGT+TGG | - | chr4.4:23643364-23643383 | MS.gene33764:intron | 35.0% | |
| ! | AACTCTCATTTTCTTCCCTA+AGG | + | chr4.4:23641051-23641070 | None:intergenic | 35.0% |
| ! | ACCTTTTGCTTATGTATCCT+TGG | - | chr4.4:23643360-23643379 | MS.gene33764:intron | 35.0% |
| ! | CAAGGTTTTGCAATTTACCT+TGG | - | chr4.4:23641568-23641587 | MS.gene33764:intron | 35.0% |
| ! | CATTTTACTGAAGATGAGGA+AGG | + | chr4.4:23643870-23643889 | None:intergenic | 35.0% |
| ! | CCTTTTCTTTTGCTTTCATC+AGG | - | chr4.4:23644644-23644663 | MS.gene33764:CDS | 35.0% |
| ! | CTTCTGATTTTCTGCATTGT+TGG | + | chr4.4:23645391-23645410 | None:intergenic | 35.0% |
| !! | ATATCAGATACTCTGAAGCA+CGG | + | chr4.4:23644185-23644204 | None:intergenic | 35.0% |
| !! | ATTGTGTTGGTTCCTTATGT+AGG | - | chr4.4:23642261-23642280 | MS.gene33764:intron | 35.0% |
| !! | TGGAAGTATTCACATGAACA+AGG | - | chr4.4:23641550-23641569 | MS.gene33764:intron | 35.0% |
| !! | TTGGTTGGTAAATGTAGCTA+AGG | - | chr4.4:23643379-23643398 | MS.gene33764:intron | 35.0% |
| !! | TTTCTGGTCTTAGAGATATG+CGG | - | chr4.4:23642700-23642719 | MS.gene33764:intron | 35.0% |
| !!! | GATTTTTTCTATCCCAACGT+TGG | - | chr4.4:23640826-23640845 | MS.gene33764:CDS | 35.0% |
| AACAGCAATAGGTGCTTTAG+AGG | + | chr4.4:23643178-23643197 | None:intergenic | 40.0% | |
| AACCAACACAATAGCAACAC+TGG | + | chr4.4:23642253-23642272 | None:intergenic | 40.0% | |
| AAGGAACTGTAACAGTGCAA+AGG | + | chr4.4:23644238-23644257 | None:intergenic | 40.0% | |
| AAGGCAAATCATTCCAAGAG+GGG | + | chr4.4:23641963-23641982 | None:intergenic | 40.0% | |
| AATTACCAATGATCAGGTGG+TGG | - | chr4.4:23641247-23641266 | MS.gene33764:intron | 40.0% | |
| ACAACTAGCAGCCTCTAATA+TGG | + | chr4.4:23644281-23644300 | None:intergenic | 40.0% | |
| AGAACCTGATCCAAGTGATA+TGG | - | chr4.4:23644534-23644553 | MS.gene33764:CDS | 40.0% | |
| AGCGTCACTAAAACCATTCA+AGG | + | chr4.4:23641531-23641550 | None:intergenic | 40.0% | |
| ATAACAATTTCCGATCCGCT+AGG | + | chr4.4:23641767-23641786 | None:intergenic | 40.0% | |
| ATATTAGAGGCTGCTAGTTG+TGG | - | chr4.4:23644280-23644299 | MS.gene33764:intron | 40.0% | |
| ATCTACTTGAACGACTCTCA+CGG | - | chr4.4:23644787-23644806 | MS.gene33764:CDS | 40.0% | |
| ATCTTCATGCCATGTCATTC+AGG | + | chr4.4:23643110-23643129 | None:intergenic | 40.0% | |
| ATGCTTATGGAAAACGCTCT+GGG | - | chr4.4:23641279-23641298 | MS.gene33764:intron | 40.0% | |
| ATTAACTTATGGTCCCCTCT+TGG | - | chr4.4:23641947-23641966 | MS.gene33764:intron | 40.0% | |
| ATTTGCGACACAACTTAGCT+TGG | + | chr4.4:23643475-23643494 | None:intergenic | 40.0% | |
| CAAGCTTCAGCCACTTAAAA+TGG | + | chr4.4:23642797-23642816 | None:intergenic | 40.0% | |
| CATTCTCTTCAAGATCGAGT+TGG | - | chr4.4:23642453-23642472 | MS.gene33764:intron | 40.0% | |
| CCATGATTCTAGCATGCATA+AGG | + | chr4.4:23641481-23641500 | None:intergenic | 40.0% | |
| CCATTCACACAATGTCAGTT+AGG | - | chr4.4:23643039-23643058 | MS.gene33764:intron | 40.0% | |
| CCTAACTGACATTGTGTGAA+TGG | + | chr4.4:23643042-23643061 | None:intergenic | 40.0% | |
| CCTTATGCATGCTAGAATCA+TGG | - | chr4.4:23641478-23641497 | MS.gene33764:intron | 40.0% | |
| CGTTTCATTATTGGAGGTGA+TGG | - | chr4.4:23642393-23642412 | MS.gene33764:intron | 40.0% | |
| CTGTACAACATACAGATGTC+CGG | - | chr4.4:23642487-23642506 | MS.gene33764:intron | 40.0% | |
| GAAAGAATTACCGTTGTGCA+TGG | - | chr4.4:23641422-23641441 | MS.gene33764:CDS | 40.0% | |
| GATTATCCAAACAGAGCCTT+AGG | - | chr4.4:23641032-23641051 | MS.gene33764:CDS | 40.0% | |
| GTCCGGTCTGTTCTAATAAA+AGG | - | chr4.4:23642504-23642523 | MS.gene33764:intron | 40.0% | |
| GTCTTTAATGTCTACACTCG+AGG | + | chr4.4:23642346-23642365 | None:intergenic | 40.0% | |
| GTGGTTGTAACTCATGCTTA+TGG | - | chr4.4:23641266-23641285 | MS.gene33764:intron | 40.0% | |
| TAAGCCATTTAAGCCAGTGT+CGG | - | chr4.4:23641709-23641728 | MS.gene33764:intron | 40.0% | |
| TACGGGTACGTTTAGCAAAA+CGG | - | chr4.4:23644154-23644173 | MS.gene33764:intron | 40.0% | |
| TATGGCGTATATTGGAGCTA+TGG | - | chr4.4:23645194-23645213 | MS.gene33764:intron | 40.0% | |
| TGCTAGAATCATGGGATACA+AGG | - | chr4.4:23641487-23641506 | MS.gene33764:intron | 40.0% | |
| TTAGCCTGCTGATGATATTG+AGG | - | chr4.4:23645304-23645323 | MS.gene33764:CDS | 40.0% | |
| ! | ATTTTGGACTACGGTCATGT+GGG | - | chr4.4:23644452-23644471 | MS.gene33764:CDS | 40.0% |
| ! | CATTTTTGCTTCGTCGTGTT+CGG | - | chr4.4:23645242-23645261 | MS.gene33764:intron | 40.0% |
| ! | CTTTTCAACACTTTGTCACG+AGG | - | chr4.4:23641454-23641473 | MS.gene33764:CDS | 40.0% |
| ! | GCCCTTTTATTAGAACAGAC+CGG | + | chr4.4:23642509-23642528 | None:intergenic | 40.0% |
| ! | TTCCAGTGTTGCTATTGTGT+TGG | - | chr4.4:23642248-23642267 | MS.gene33764:intron | 40.0% |
| ! | TTTTTCTATCCCAACGTTGG+TGG | - | chr4.4:23640829-23640848 | MS.gene33764:CDS | 40.0% |
| !! | AGTCGATTGGTTTACCGTAA+AGG | - | chr4.4:23641797-23641816 | MS.gene33764:intron | 40.0% |
| !! | CAAGATCGAGTTGGTTTGTT+GGG | - | chr4.4:23642462-23642481 | MS.gene33764:intron | 40.0% |
| !! | CTCGTGACAAAGTGTTGAAA+AGG | + | chr4.4:23641456-23641475 | None:intergenic | 40.0% |
| !! | TATCAGATACTCTGAAGCAC+GGG | + | chr4.4:23644184-23644203 | None:intergenic | 40.0% |
| !! | TATTTTGGACTACGGTCATG+TGG | - | chr4.4:23644451-23644470 | MS.gene33764:CDS | 40.0% |
| !! | TCAAGATCGAGTTGGTTTGT+TGG | - | chr4.4:23642461-23642480 | MS.gene33764:intron | 40.0% |
| !! | TGTTTTAGACACCTCTCTTG+CGG | - | chr4.4:23645121-23645140 | MS.gene33764:intron | 40.0% |
| !!! | TTGAATGGTTTTAGTGACGC+TGG | - | chr4.4:23641530-23641549 | MS.gene33764:intron | 40.0% |
| !!! | TTGGCTTGTTTTGCATAACG+CGG | - | chr4.4:23641877-23641896 | MS.gene33764:CDS | 40.0% |
| AACGATGTTGCTCTCTGCAA+TGG | + | chr4.4:23642182-23642201 | None:intergenic | 45.0% | |
| ACATCCCTCCAAATCCATCA+CGG | + | chr4.4:23645358-23645377 | None:intergenic | 45.0% | |
| ACGGGGTTATTTGGGTGAAA+TGG | + | chr4.4:23643305-23643324 | None:intergenic | 45.0% | |
| ACTCGATTGTGCATGACTTG+AGG | + | chr4.4:23644604-23644623 | None:intergenic | 45.0% | |
| ACTGTAACAGTGCAAAGGTC+AGG | + | chr4.4:23644233-23644252 | None:intergenic | 45.0% | |
| AGATGAGGGAACTCTATAGC+TGG | - | chr4.4:23644703-23644722 | MS.gene33764:CDS | 45.0% | |
| CATGCTTATGGAAAACGCTC+TGG | - | chr4.4:23641278-23641297 | MS.gene33764:intron | 45.0% | |
| CGTATCTGATCTGTGTTGCA+CGG | - | chr4.4:23643561-23643580 | MS.gene33764:intron | 45.0% | |
| CTCACGGTACACACTTTGAT+AGG | - | chr4.4:23644803-23644822 | MS.gene33764:CDS | 45.0% | |
| CTTAAACAGGTTTGGCATCC+TGG | - | chr4.4:23642536-23642555 | MS.gene33764:intron | 45.0% | |
| GGTTTGATGTCCATGCACAA+CGG | + | chr4.4:23641435-23641454 | None:intergenic | 45.0% | |
| GTATCTGATCTGTGTTGCAC+GGG | - | chr4.4:23643562-23643581 | MS.gene33764:intron | 45.0% | |
| TAACAGTGCAAAGGTCAGGT+AGG | + | chr4.4:23644229-23644248 | None:intergenic | 45.0% | |
| TACAACCACCACCTGATCAT+TGG | + | chr4.4:23641255-23641274 | None:intergenic | 45.0% | |
| TCTCAATGCCTGCTCAACTT+AGG | - | chr4.4:23640877-23640896 | MS.gene33764:intron | 45.0% | |
| TGCTTATGGAAAACGCTCTG+GGG | - | chr4.4:23641280-23641299 | MS.gene33764:intron | 45.0% | |
| TTAACAGTTAGCACACGCGT+CGG | - | chr4.4:23644307-23644326 | MS.gene33764:intron | 45.0% | |
| TTCTTCCCTAAGGCTCTGTT+TGG | + | chr4.4:23641041-23641060 | None:intergenic | 45.0% | |
| TTGGCAGTGTCAACAGCATT+AGG | + | chr4.4:23641686-23641705 | None:intergenic | 45.0% | |
| TTGGGCGAGAGAATGAAATC+CGG | + | chr4.4:23645335-23645354 | None:intergenic | 45.0% | |
| TTTGCTAAACGTACCCGTAC+CGG | + | chr4.4:23644153-23644172 | None:intergenic | 45.0% | |
| ! | CTTTAGGGACCTGAATGACA+TGG | - | chr4.4:23643098-23643117 | MS.gene33764:intron | 45.0% |
| ! | CTTTCTCTGTCAAGAAGCAC+CGG | + | chr4.4:23641995-23642014 | None:intergenic | 45.0% |
| ! | GATTTGCCTTTTTGTCCTGC+CGG | - | chr4.4:23641973-23641992 | MS.gene33764:intron | 45.0% |
| ! | GGCAGGAAAGATCTTTTGCT+TGG | - | chr4.4:23645150-23645169 | MS.gene33764:intron | 45.0% |
| ! | GTAAGGAGAACACGGTTTTG+AGG | - | chr4.4:23641627-23641646 | MS.gene33764:CDS | 45.0% |
| ! | TTTTAATGGTTGGGTACGGC+CGG | + | chr4.4:23644066-23644085 | None:intergenic | 45.0% |
| ! | TTTTGGACTACGGTCATGTG+GGG | - | chr4.4:23644453-23644472 | MS.gene33764:CDS | 45.0% |
| !! | GGGAGTGTTCCATACAAAGT+TGG | + | chr4.4:23641377-23641396 | None:intergenic | 45.0% |
| !! | GTACTGCAGTGGTACTGATT+GGG | + | chr4.4:23644042-23644061 | None:intergenic | 45.0% |
| !! | GTGATGGACCTAAACGTGTA+CGG | - | chr4.4:23642409-23642428 | MS.gene33764:intron | 45.0% |
| !!! | GTTTTTTTTTTTTTTTTTAA+TGG | + | chr4.4:23644080-23644099 | None:intergenic | 5.0% |
| ACAATTTCCGATCCGCTAGG+AGG | + | chr4.4:23641764-23641783 | None:intergenic | 50.0% | |
| ACCTAAACGTGTACGGTTGG+AGG | - | chr4.4:23642416-23642435 | MS.gene33764:intron | 50.0% | |
| ATACTTGTGGTGCCTACCTC+AGG | + | chr4.4:23644340-23644359 | None:intergenic | 50.0% | |
| ATTCTCGACACCACCAACGT+TGG | + | chr4.4:23640842-23640861 | None:intergenic | 50.0% | |
| ATTGCGCGCACCATATCACT+TGG | + | chr4.4:23644547-23644566 | None:intergenic | 50.0% | |
| CCAGAGGTCATGCAACAAAC+TGG | + | chr4.4:23643270-23643289 | None:intergenic | 50.0% | |
| CCTCCAAATCCATCACGGTT+GGG | + | chr4.4:23645353-23645372 | None:intergenic | 50.0% | |
| CGCACCATATCACTTGGATC+AGG | + | chr4.4:23644541-23644560 | None:intergenic | 50.0% | |
| GCAGCATAGTTATCGCCTTC+TGG | + | chr4.4:23644570-23644589 | None:intergenic | 50.0% | |
| GCCTCCTCAATATCATCAGC+AGG | + | chr4.4:23645311-23645330 | None:intergenic | 50.0% | |
| GCCTGCTGATGATATTGAGG+AGG | - | chr4.4:23645307-23645326 | MS.gene33764:CDS | 50.0% | |
| GCGTATATTGGAGCTATGGC+AGG | - | chr4.4:23645198-23645217 | MS.gene33764:intron | 50.0% | |
| GCTGGCATGATGTTGCCAAA+AGG | - | chr4.4:23644721-23644740 | MS.gene33764:CDS | 50.0% | |
| GGATGCAATCGACACACTTC+TGG | + | chr4.4:23641848-23641867 | None:intergenic | 50.0% | |
| TACCTTGGCAGATGTGAGTC+AGG | - | chr4.4:23641583-23641602 | MS.gene33764:CDS | 50.0% | |
| TCCTCCAACCGTACACGTTT+AGG | + | chr4.4:23642420-23642439 | None:intergenic | 50.0% | |
| TGGACCTAAACGTGTACGGT+TGG | - | chr4.4:23642413-23642432 | MS.gene33764:intron | 50.0% | |
| TTCTCGACACCACCAACGTT+GGG | + | chr4.4:23640841-23640860 | None:intergenic | 50.0% | |
| TTGCTAAACGTACCCGTACC+GGG | + | chr4.4:23644152-23644171 | None:intergenic | 50.0% | |
| TTTAATGGTTGGGTACGGCC+GGG | + | chr4.4:23644065-23644084 | None:intergenic | 50.0% | |
| ! | ATTTAAGCCAGTGTCGGAGG+CGG | - | chr4.4:23641715-23641734 | MS.gene33764:intron | 50.0% |
| ! | CAAGCAAGTCGGCTCCTTTA+CGG | + | chr4.4:23641814-23641833 | None:intergenic | 50.0% |
| ! | TCTGGGGTCAGATACATGAC+AGG | - | chr4.4:23641296-23641315 | MS.gene33764:intron | 50.0% |
| ! | TGATGATATTGAGGAGGCGC+CGG | - | chr4.4:23645313-23645332 | MS.gene33764:CDS | 50.0% |
| !! | AGTTGAGCAGGCATTGAGAG+AGG | + | chr4.4:23640876-23640895 | None:intergenic | 50.0% |
| !! | CCAACCGTGATGGATTTGGA+GGG | - | chr4.4:23645351-23645370 | MS.gene33764:CDS | 50.0% |
| !! | CCAGTTTGTTGCATGACCTC+TGG | - | chr4.4:23643267-23643286 | MS.gene33764:intron | 50.0% |
| !! | GGTACTGCAGTGGTACTGAT+TGG | + | chr4.4:23644043-23644062 | None:intergenic | 50.0% |
| !! | TGCATGACCTCTGGAGCAAA+GGG | - | chr4.4:23643276-23643295 | MS.gene33764:intron | 50.0% |
| !! | TTGCATGACCTCTGGAGCAA+AGG | - | chr4.4:23643275-23643294 | MS.gene33764:intron | 50.0% |
| !!! | GAGAACACGGTTTTGAGGTC+CGG | - | chr4.4:23641632-23641651 | MS.gene33764:CDS | 50.0% |
| ACACCTCTCTTGCGGAGCAT+GGG | - | chr4.4:23645129-23645148 | MS.gene33764:intron | 55.0% | |
| ACCGTACGTGTACCAGTACC+CGG | - | chr4.4:23644131-23644150 | MS.gene33764:intron | 55.0% | |
| ACGTGTACCAGTACCCGGTA+CGG | - | chr4.4:23644136-23644155 | MS.gene33764:intron | 55.0% | |
| AGCCTGACTCACATCTGCCA+AGG | + | chr4.4:23641588-23641607 | None:intergenic | 55.0% | |
| ATTCTCTCGCCCAACCGTGA+TGG | - | chr4.4:23645341-23645360 | MS.gene33764:CDS | 55.0% | |
| CCCTCCAAATCCATCACGGT+TGG | + | chr4.4:23645354-23645373 | None:intergenic | 55.0% | |
| CCTGCTCAACTTAGGCCACA+AGG | - | chr4.4:23640885-23640904 | MS.gene33764:intron | 55.0% | |
| GGGGTCAGATACATGACAGG+TGG | - | chr4.4:23641299-23641318 | MS.gene33764:intron | 55.0% | |
| TATGGTGCGCGCAATCCAGA+AGG | - | chr4.4:23644552-23644571 | MS.gene33764:CDS | 55.0% | |
| TCAGTACCACTGCAGTACCC+CGG | - | chr4.4:23644044-23644063 | MS.gene33764:intron | 55.0% | |
| TGATCTGTGTTGCACGGGTG+CGG | - | chr4.4:23643567-23643586 | MS.gene33764:intron | 55.0% | |
| TTAATGGTTGGGTACGGCCG+GGG | + | chr4.4:23644064-23644083 | None:intergenic | 55.0% | |
| ! | CCTTGTGGCCTAAGTTGAGC+AGG | + | chr4.4:23640888-23640907 | None:intergenic | 55.0% |
| ! | GCCATTTAAGCCAGTGTCGG+AGG | - | chr4.4:23641712-23641731 | MS.gene33764:intron | 55.0% |
| !! | ACCGGGTACTGGTACACGTA+CGG | + | chr4.4:23644135-23644154 | None:intergenic | 55.0% |
| !! | CCCAACCGTGATGGATTTGG+AGG | - | chr4.4:23645350-23645369 | MS.gene33764:CDS | 55.0% |
| !! | GAAGCACCGGCAGGACAAAA+AGG | + | chr4.4:23641982-23642001 | None:intergenic | 55.0% |
| !! | GCATGACCTCTGGAGCAAAG+GGG | - | chr4.4:23643277-23643296 | MS.gene33764:intron | 55.0% |
| !! | GCCTCCGACACTGGCTTAAA+TGG | + | chr4.4:23641716-23641735 | None:intergenic | 55.0% |
| !! | TCGCCCAACCGTGATGGATT+TGG | - | chr4.4:23645347-23645366 | MS.gene33764:CDS | 55.0% |
| !!! | CACGGTTTTGAGGTCCGGTT+TGG | - | chr4.4:23641637-23641656 | MS.gene33764:CDS | 55.0% |
| AACCTTCTCCGGCGCCAAAC+CGG | + | chr4.4:23641654-23641673 | None:intergenic | 60.0% | |
| AACGTACCCGTACCGGGTAC+TGG | + | chr4.4:23644146-23644165 | None:intergenic | 60.0% | |
| ACAGTTAGCACACGCGTCGG+AGG | - | chr4.4:23644310-23644329 | MS.gene33764:intron | 60.0% | |
| ATGGTGCCCCTTTGCTCCAG+AGG | + | chr4.4:23643286-23643305 | None:intergenic | 60.0% | |
| CGTGTACCAGTACCCGGTAC+GGG | - | chr4.4:23644137-23644156 | MS.gene33764:intron | 60.0% | |
| GACACCTCTCTTGCGGAGCA+TGG | - | chr4.4:23645128-23645147 | MS.gene33764:intron | 60.0% | |
| GATCTGTGTTGCACGGGTGC+GGG | - | chr4.4:23643568-23643587 | MS.gene33764:intron | 60.0% | |
| ! | GTACGCACCCATGAAGCACC+AGG | + | chr4.4:23644102-23644121 | None:intergenic | 60.0% |
| !! | CTCTGTCAAGAAGCACCGGC+AGG | + | chr4.4:23641991-23642010 | None:intergenic | 60.0% |
| !! | GTCGGAGGTGTTCCTGAGGT+AGG | - | chr4.4:23644325-23644344 | MS.gene33764:CDS | 60.0% |
| !! | TTTGAGGTCCGGTTTGGCGC+CGG | - | chr4.4:23641643-23641662 | MS.gene33764:CDS | 60.0% |
| CTCTCTTGCGGAGCATGGGC+AGG | - | chr4.4:23645133-23645152 | MS.gene33764:intron | 65.0% | |
| CTGCCCATGCTCCGCAAGAG+AGG | + | chr4.4:23645135-23645154 | None:intergenic | 65.0% | |
| ! | GGAGCGTCCTCCTAGCGGAT+CGG | - | chr4.4:23641754-23641773 | MS.gene33764:intron | 65.0% |
| ! | TAAGCCAGTGTCGGAGGCGG+AGG | - | chr4.4:23641718-23641737 | MS.gene33764:intron | 65.0% |
| !! | ACGCGTCGGAGGTGTTCCTG+AGG | - | chr4.4:23644321-23644340 | MS.gene33764:CDS | 65.0% |
| !! | GAGGAGGAGCGTCCTCCTAG+CGG | - | chr4.4:23641749-23641768 | MS.gene33764:intron | 65.0% |
| GCGGGTGCGGGTACGGGATA+CGG | - | chr4.4:23643610-23643629 | MS.gene33764:intron | 70.0% | |
| GTGTTGCACGGGTGCGGGTG+CGG | - | chr4.4:23643573-23643592 | MS.gene33764:intron | 70.0% | |
| TACGGGTGCGGGTGCGGGTA+CGG | - | chr4.4:23643603-23643622 | MS.gene33764:intron | 70.0% | |
| TGCGGGTGCGGTACCCGGTA+CGG | - | chr4.4:23643585-23643604 | MS.gene33764:intron | 70.0% | |
| TGCGGTACCCGGTACGGGTG+CGG | - | chr4.4:23643591-23643610 | MS.gene33764:intron | 70.0% | |
| !! | GTACGGCCGGGGTACTGCAG+TGG | + | chr4.4:23644053-23644072 | None:intergenic | 70.0% |
| !! | GTCCGGTTTGGCGCCGGAGA+AGG | - | chr4.4:23641649-23641668 | MS.gene33764:CDS | 70.0% |
| ACCCGCACCCGCACCCGTAC+CGG | + | chr4.4:23643602-23643621 | None:intergenic | 75.0% | |
| ACCCGGTACGGGTGCGGGTG+CGG | - | chr4.4:23643597-23643616 | MS.gene33764:intron | 75.0% | |
| ACGGGTGCGGGTGCGGGTAC+GGG | - | chr4.4:23643604-23643623 | MS.gene33764:intron | 75.0% | |
| ACGGGTGCGGGTGCGGTACC+CGG | - | chr4.4:23643580-23643599 | MS.gene33764:intron | 75.0% | |
| GCGGGTGCGGTACCCGGTAC+GGG | - | chr4.4:23643586-23643605 | MS.gene33764:intron | 75.0% | |
| GCGGTACCCGGTACGGGTGC+GGG | - | chr4.4:23643592-23643611 | MS.gene33764:intron | 75.0% | |
| TCCGCCTCCGCCTCCGACAC+TGG | + | chr4.4:23641725-23641744 | None:intergenic | 75.0% | |
| ! | AGTGTCGGAGGCGGAGGCGG+AGG | - | chr4.4:23641724-23641743 | MS.gene33764:intron | 75.0% |
| ! | GCCAGTGTCGGAGGCGGAGG+CGG | - | chr4.4:23641721-23641740 | MS.gene33764:intron | 75.0% |
| ! | CCCGCACCCGCACCCGTACC+GGG | + | chr4.4:23643601-23643620 | None:intergenic | 80.0% |
| ! | CCCGGTACGGGTGCGGGTGC+GGG | - | chr4.4:23643598-23643617 | MS.gene33764:intron | 80.0% |
| ! | GTCGGAGGCGGAGGCGGAGG+CGG | - | chr4.4:23641727-23641746 | MS.gene33764:intron | 80.0% |
| ! | GGAGGCGGAGGCGGAGGCGG+AGG | - | chr4.4:23641730-23641749 | MS.gene33764:intron | 85.0% |
| ! | GGCGGAGGCGGAGGCGGAGG+AGG | - | chr4.4:23641733-23641752 | MS.gene33764:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 23640775 | 23645415 | 23640775 | ID=MS.gene33764 |
| chr4.4 | mRNA | 23640775 | 23645415 | 23640775 | ID=MS.gene33764.t1;Parent=MS.gene33764 |
| chr4.4 | exon | 23645284 | 23645415 | 23645284 | ID=MS.gene33764.t1.exon1;Parent=MS.gene33764.t1 |
| chr4.4 | CDS | 23645284 | 23645415 | 23645284 | ID=cds.MS.gene33764.t1;Parent=MS.gene33764.t1 |
| chr4.4 | exon | 23644319 | 23644927 | 23644319 | ID=MS.gene33764.t1.exon2;Parent=MS.gene33764.t1 |
| chr4.4 | CDS | 23644319 | 23644927 | 23644319 | ID=cds.MS.gene33764.t1;Parent=MS.gene33764.t1 |
| chr4.4 | exon | 23643646 | 23643800 | 23643646 | ID=MS.gene33764.t1.exon3;Parent=MS.gene33764.t1 |
| chr4.4 | CDS | 23643646 | 23643800 | 23643646 | ID=cds.MS.gene33764.t1;Parent=MS.gene33764.t1 |
| chr4.4 | exon | 23641848 | 23641938 | 23641848 | ID=MS.gene33764.t1.exon4;Parent=MS.gene33764.t1 |
| chr4.4 | CDS | 23641848 | 23641938 | 23641848 | ID=cds.MS.gene33764.t1;Parent=MS.gene33764.t1 |
| chr4.4 | exon | 23641569 | 23641685 | 23641569 | ID=MS.gene33764.t1.exon5;Parent=MS.gene33764.t1 |
| chr4.4 | CDS | 23641569 | 23641685 | 23641569 | ID=cds.MS.gene33764.t1;Parent=MS.gene33764.t1 |
| chr4.4 | exon | 23641382 | 23641485 | 23641382 | ID=MS.gene33764.t1.exon6;Parent=MS.gene33764.t1 |
| chr4.4 | CDS | 23641382 | 23641485 | 23641382 | ID=cds.MS.gene33764.t1;Parent=MS.gene33764.t1 |
| chr4.4 | exon | 23640971 | 23641061 | 23640971 | ID=MS.gene33764.t1.exon7;Parent=MS.gene33764.t1 |
| chr4.4 | CDS | 23640971 | 23641061 | 23640971 | ID=cds.MS.gene33764.t1;Parent=MS.gene33764.t1 |
| chr4.4 | exon | 23640775 | 23640882 | 23640775 | ID=MS.gene33764.t1.exon8;Parent=MS.gene33764.t1 |
| chr4.4 | CDS | 23640775 | 23640882 | 23640775 | ID=cds.MS.gene33764.t1;Parent=MS.gene33764.t1 |
| Gene Sequence |
| Protein sequence |
