Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34219.t1 | XP_013445393.1 | 95.9 | 342 | 14 | 0 | 1 | 342 | 3 | 344 | 8.00E-179 | 636.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34219.t1 | Q9LTQ0 | 51.3 | 339 | 159 | 3 | 5 | 342 | 58 | 391 | 1.8e-91 | 337.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34219.t1 | A0A072TPL1 | 95.9 | 342 | 14 | 0 | 1 | 342 | 3 | 344 | 5.7e-179 | 636.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050226 | MS.gene34219 | 0.803198 | 3.91E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene34219 | 0.807031 | 6.16E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene34219 | 0.805669 | 1.19E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene34219 | 0.8166 | 5.09E-52 | -1.69E-46 |
| MS.gene050680 | MS.gene34219 | 0.8089 | 2.47E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene34219 | 0.810191 | 1.30E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene34219 | 0.808065 | 3.72E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene34219 | 0.821052 | 4.96E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene34219 | 0.813851 | 2.08E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene34219 | 0.816283 | 5.99E-52 | -1.69E-46 |
| MS.gene055356 | MS.gene34219 | 0.818774 | 1.64E-52 | -1.69E-46 |
| MS.gene055357 | MS.gene34219 | 0.826158 | 3.16E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene34219 | 0.84721 | 1.34E-59 | -1.69E-46 |
| MS.gene057469 | MS.gene34219 | 0.806368 | 8.51E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene34219 | 0.813544 | 2.43E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene34219 | 0.808254 | 3.39E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene34219 | -0.804207 | 2.41E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34219.t1 | MTR_8g058930 | 95.906 | 342 | 14 | 0 | 1 | 342 | 3 | 344 | 0.0 | 675 |
| MS.gene34219.t1 | MTR_3g096700 | 79.240 | 342 | 71 | 0 | 1 | 342 | 3 | 344 | 0.0 | 558 |
| MS.gene34219.t1 | MTR_3g080000 | 43.568 | 241 | 126 | 6 | 10 | 248 | 72 | 304 | 3.60e-55 | 183 |
| MS.gene34219.t1 | MTR_7g118350 | 34.694 | 343 | 201 | 7 | 9 | 338 | 1544 | 1876 | 7.20e-51 | 182 |
| MS.gene34219.t1 | MTR_7g118350 | 34.694 | 343 | 201 | 7 | 9 | 338 | 1505 | 1837 | 9.03e-51 | 182 |
| MS.gene34219.t1 | MTR_3g079980 | 41.036 | 251 | 126 | 7 | 7 | 248 | 227 | 464 | 9.92e-49 | 172 |
| MS.gene34219.t1 | MTR_3g079860 | 38.583 | 254 | 138 | 6 | 6 | 252 | 165 | 407 | 3.71e-44 | 159 |
| MS.gene34219.t1 | MTR_3g105390 | 28.954 | 411 | 211 | 10 | 5 | 338 | 1291 | 1697 | 6.37e-40 | 150 |
| MS.gene34219.t1 | MTR_2g030490 | 33.468 | 248 | 145 | 9 | 6 | 241 | 1136 | 1375 | 8.97e-32 | 126 |
| MS.gene34219.t1 | MTR_1g060740 | 30.252 | 238 | 156 | 5 | 6 | 235 | 1138 | 1373 | 3.43e-30 | 122 |
| MS.gene34219.t1 | MTR_4g116860 | 29.286 | 280 | 172 | 6 | 1 | 260 | 1195 | 1468 | 1.17e-28 | 117 |
| MS.gene34219.t1 | MTR_3g080010 | 34.459 | 148 | 81 | 5 | 106 | 248 | 2 | 138 | 1.71e-16 | 75.9 |
| MS.gene34219.t1 | MTR_3g080020 | 48.571 | 70 | 34 | 1 | 7 | 74 | 55 | 124 | 7.30e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34219.t1 | AT3G20420 | 51.613 | 341 | 155 | 4 | 5 | 342 | 58 | 391 | 2.91e-120 | 352 |
| MS.gene34219.t1 | AT5G45150 | 35.714 | 392 | 181 | 9 | 5 | 337 | 2 | 381 | 1.77e-61 | 211 |
| MS.gene34219.t1 | AT5G45150 | 36.398 | 261 | 153 | 5 | 2 | 259 | 410 | 660 | 2.90e-45 | 166 |
| MS.gene34219.t1 | AT5G45150 | 42.308 | 78 | 43 | 1 | 262 | 337 | 834 | 911 | 2.07e-12 | 68.9 |
| MS.gene34219.t1 | AT1G01040 | 36.441 | 354 | 197 | 6 | 7 | 338 | 1560 | 1907 | 1.16e-55 | 196 |
| MS.gene34219.t1 | AT1G01040 | 36.441 | 354 | 197 | 6 | 7 | 338 | 1559 | 1906 | 1.31e-55 | 196 |
| MS.gene34219.t1 | AT5G45150 | 36.398 | 261 | 153 | 5 | 2 | 259 | 214 | 464 | 1.59e-45 | 166 |
| MS.gene34219.t1 | AT5G45150 | 42.308 | 78 | 43 | 1 | 262 | 337 | 638 | 715 | 2.28e-12 | 68.6 |
| MS.gene34219.t1 | AT5G45150 | 43.662 | 71 | 38 | 1 | 269 | 337 | 115 | 185 | 2.29e-11 | 65.5 |
| MS.gene34219.t1 | AT5G45150 | 36.398 | 261 | 153 | 5 | 2 | 259 | 214 | 464 | 1.59e-45 | 166 |
| MS.gene34219.t1 | AT5G45150 | 42.308 | 78 | 43 | 1 | 262 | 337 | 638 | 715 | 2.28e-12 | 68.6 |
| MS.gene34219.t1 | AT5G45150 | 43.662 | 71 | 38 | 1 | 269 | 337 | 115 | 185 | 2.29e-11 | 65.5 |
| MS.gene34219.t1 | AT4G15417 | 36.515 | 241 | 142 | 6 | 7 | 244 | 29 | 261 | 1.04e-38 | 139 |
| MS.gene34219.t1 | AT4G15417 | 36.515 | 241 | 142 | 6 | 7 | 244 | 54 | 286 | 1.51e-38 | 139 |
| MS.gene34219.t1 | AT3G43920 | 27.202 | 386 | 230 | 8 | 4 | 342 | 1185 | 1566 | 5.84e-37 | 142 |
| MS.gene34219.t1 | AT3G43920 | 27.202 | 386 | 230 | 8 | 4 | 342 | 967 | 1348 | 5.87e-37 | 141 |
| MS.gene34219.t1 | AT3G43920 | 27.202 | 386 | 230 | 8 | 4 | 342 | 1184 | 1565 | 6.07e-37 | 141 |
| MS.gene34219.t1 | AT3G43920 | 27.202 | 386 | 230 | 8 | 4 | 342 | 1195 | 1576 | 6.75e-37 | 141 |
| MS.gene34219.t1 | AT3G43920 | 27.202 | 386 | 230 | 8 | 4 | 342 | 1146 | 1527 | 7.88e-37 | 141 |
| MS.gene34219.t1 | AT3G43920 | 33.333 | 240 | 156 | 2 | 4 | 243 | 1185 | 1420 | 1.19e-36 | 140 |
| MS.gene34219.t1 | AT5G20320 | 29.167 | 264 | 160 | 7 | 1 | 244 | 1061 | 1317 | 8.02e-26 | 109 |
| MS.gene34219.t1 | AT5G20320 | 30.952 | 168 | 89 | 5 | 6 | 152 | 866 | 1027 | 3.96e-12 | 68.2 |
| MS.gene34219.t1 | AT5G20320 | 29.167 | 264 | 160 | 7 | 1 | 244 | 1272 | 1528 | 9.29e-26 | 108 |
| MS.gene34219.t1 | AT5G20320 | 30.952 | 168 | 89 | 5 | 6 | 152 | 1077 | 1238 | 3.47e-12 | 68.2 |
| MS.gene34219.t1 | AT5G20320 | 29.167 | 264 | 160 | 7 | 1 | 244 | 1286 | 1542 | 9.84e-26 | 108 |
| MS.gene34219.t1 | AT5G20320 | 30.952 | 168 | 89 | 5 | 6 | 152 | 1091 | 1252 | 3.87e-12 | 68.2 |
| MS.gene34219.t1 | AT3G03300 | 33.854 | 192 | 114 | 6 | 6 | 190 | 1148 | 1333 | 3.04e-25 | 107 |
| MS.gene34219.t1 | AT3G03300 | 33.854 | 192 | 114 | 6 | 6 | 190 | 1148 | 1333 | 3.04e-25 | 107 |
| MS.gene34219.t1 | AT3G03300 | 33.854 | 192 | 114 | 6 | 6 | 190 | 935 | 1120 | 3.43e-25 | 107 |
| MS.gene34219.t1 | AT3G03300 | 33.854 | 192 | 114 | 6 | 6 | 190 | 1134 | 1319 | 4.21e-25 | 107 |
Find 81 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTCGTAGGAAACGGATTC+AGG | 0.236317 | 8.4:+47781015 | None:intergenic |
| GCAGATATTAAGAGGTCTTT+TGG | 0.236581 | 8.4:-47779731 | MS.gene34219:intron |
| GTTGAACGTGAGAATGATTT+TGG | 0.257919 | 8.4:-47780775 | MS.gene34219:CDS |
| GTTCGTTGGTGACGCTGTTT+TGG | 0.267706 | 8.4:-47780986 | MS.gene34219:CDS |
| TACCATCTGGAGTGGCTATC+TGG | 0.295887 | 8.4:+47778188 | None:intergenic |
| ATAGACACTGGCAGTGCTTT+TGG | 0.317059 | 8.4:+47779594 | None:intergenic |
| CTGTCAAAAGAATGGGAAAA+AGG | 0.340722 | 8.4:-47779644 | MS.gene34219:CDS |
| ACAATAATTGTCACACATAC+TGG | 0.347364 | 8.4:+47778077 | None:intergenic |
| GTTTACCTGTATACTGGTTT+AGG | 0.347893 | 8.4:+47779367 | None:intergenic |
| GATGGTAGACTCCAGATGTT+AGG | 0.353438 | 8.4:-47778172 | MS.gene34219:CDS |
| CCGCGGCGTCCTTGATGATT+CGG | 0.354038 | 8.4:-47778114 | MS.gene34219:CDS |
| GCGGCAGTGGAGAAGATAAT+TGG | 0.354408 | 8.4:-47781093 | MS.gene34219:CDS |
| AGCAGTGTTTACCTGTATAC+TGG | 0.362259 | 8.4:+47779361 | None:intergenic |
| CACATACTGGCCTTGTTGTA+AGG | 0.396980 | 8.4:+47778090 | None:intergenic |
| AGATCATCCAGTGTTACTAT+TGG | 0.408886 | 8.4:+47779706 | None:intergenic |
| AGGTGTAAGAGAGGAAAATA+TGG | 0.418619 | 8.4:+47780947 | None:intergenic |
| CGCGGCGTCCTTGATGATTC+GGG | 0.419403 | 8.4:-47778113 | MS.gene34219:CDS |
| TCTGGAACGAAAACCGCAAC+CGG | 0.421181 | 8.4:-47779686 | MS.gene34219:CDS |
| GACCCTTGTAAAGGCCTTGA+TGG | 0.430926 | 8.4:-47779451 | MS.gene34219:CDS |
| TAGTTCATGCACGGCAATCT+TGG | 0.445790 | 8.4:+47779507 | None:intergenic |
| CAGAAGTTATATGCAATTTG+TGG | 0.445804 | 8.4:-47779403 | MS.gene34219:CDS |
| AATAGTAACACTGGATGATC+TGG | 0.448961 | 8.4:-47779704 | MS.gene34219:CDS |
| TAGAGCGTTGTCACCGGTTG+CGG | 0.451536 | 8.4:+47779673 | None:intergenic |
| GGAAGATTCAATTGCGGCAG+TGG | 0.460922 | 8.4:-47781106 | MS.gene34219:CDS |
| TATGAGATCTGTCAAAAGAA+TGG | 0.468304 | 8.4:-47779652 | MS.gene34219:CDS |
| AGAAGTTATATGCAATTTGT+GGG | 0.472067 | 8.4:-47779402 | MS.gene34219:CDS |
| ACTGCCAGTGTCTATGTTGA+TGG | 0.474062 | 8.4:-47779586 | MS.gene34219:CDS |
| GTTCGTAGGAAACGGATTCA+GGG | 0.474695 | 8.4:+47781016 | None:intergenic |
| ATGAGATCTGTCAAAAGAAT+GGG | 0.483633 | 8.4:-47779651 | MS.gene34219:CDS |
| AGAGAGTTGACCAGCGTCAA+CGG | 0.489086 | 8.4:+47780924 | None:intergenic |
| CTTGGCTGCTTCAATTTCAA+AGG | 0.495502 | 8.4:+47779426 | None:intergenic |
| ACAACATCAGCAAGAATCTT+CGG | 0.499053 | 8.4:+47780721 | None:intergenic |
| CTCGAGACGTTCGTAGGAAA+CGG | 0.499376 | 8.4:+47781008 | None:intergenic |
| ATGGTAGACTCCAGATGTTA+GGG | 0.499843 | 8.4:-47778171 | MS.gene34219:CDS |
| GCTCGTGCAGCCGTCAATCA+TGG | 0.504231 | 8.4:-47780865 | MS.gene34219:CDS |
| CTTCTAGAAGCTTCTTGTTG+AGG | 0.505073 | 8.4:+47781061 | None:intergenic |
| AGTGGCCTAAACCAGTATAC+AGG | 0.509634 | 8.4:-47779372 | MS.gene34219:intron |
| AACATCTGGAGTCTACCATC+TGG | 0.515801 | 8.4:+47778175 | None:intergenic |
| TGTCTATGTTGATGGAGAGT+TGG | 0.531039 | 8.4:-47779578 | MS.gene34219:CDS |
| GTACCATCAAGGCCTTTACA+AGG | 0.533151 | 8.4:+47779448 | None:intergenic |
| AATTGCATATAACTTCTGCT+TGG | 0.540063 | 8.4:+47779408 | None:intergenic |
| TCGGACATCATGGTAGTGGC+AGG | 0.540791 | 8.4:+47779472 | None:intergenic |
| GATTCGTGAGTTTGCTGATG+CGG | 0.541010 | 8.4:-47780797 | MS.gene34219:CDS |
| TTTGGAGCCAATAGTAACAC+TGG | 0.541015 | 8.4:-47779713 | MS.gene34219:CDS |
| TACTGCTTGCTCTGATCAGA+AGG | 0.545679 | 8.4:-47779551 | MS.gene34219:CDS |
| ATCAAGGCCTTTACAAGGGT+CGG | 0.546856 | 8.4:+47779453 | None:intergenic |
| TTTACAAGGGTCGGACATCA+TGG | 0.550600 | 8.4:+47779462 | None:intergenic |
| AACTGAACAGAAGATGAAGA+TGG | 0.558212 | 8.4:-47781127 | None:intergenic |
| ATCTCATAGAGCGTTGTCAC+CGG | 0.560294 | 8.4:+47779667 | None:intergenic |
| ATGATGTCCGACCCTTGTAA+AGG | 0.565853 | 8.4:-47779460 | MS.gene34219:CDS |
| CGGATTCAGGGTAAGAAGTG+TGG | 0.566918 | 8.4:+47781028 | None:intergenic |
| GGATTCAGGGTAAGAAGTGT+GGG | 0.570162 | 8.4:+47781029 | None:intergenic |
| CTGATCAGAAGGACATTGCA+AGG | 0.577177 | 8.4:-47779540 | MS.gene34219:CDS |
| ACGATGAAGACCATGATTGA+CGG | 0.583527 | 8.4:+47780855 | None:intergenic |
| AGGGTCGGACATCATGGTAG+TGG | 0.585876 | 8.4:+47779468 | None:intergenic |
| ATGATTCGGGCCTTACAACA+AGG | 0.588835 | 8.4:-47778100 | MS.gene34219:CDS |
| GGATGAAAAGTCTCGGCTGA+AGG | 0.589224 | 8.4:-47778149 | MS.gene34219:CDS |
| TCTTACACCTCCGTTGACGC+TGG | 0.594089 | 8.4:-47780934 | MS.gene34219:CDS |
| CAATTTCAAAGGTACCATCA+AGG | 0.595839 | 8.4:+47779437 | None:intergenic |
| TTGTAAGGCCCGAATCATCA+AGG | 0.599006 | 8.4:+47778105 | None:intergenic |
| TACGAACGTCTCGAGTTCGT+TGG | 0.604550 | 8.4:-47781000 | MS.gene34219:CDS |
| TGATCTTAAGAAATTATGGG+TGG | 0.607681 | 8.4:-47780659 | MS.gene34219:intron |
| GAGATAAGACAATCGAGGAA+TGG | 0.616598 | 8.4:-47779619 | MS.gene34219:CDS |
| CTCTCCATCAACATAGACAC+TGG | 0.622843 | 8.4:+47779582 | None:intergenic |
| TGTTAGGGGATGAAAAGTCT+CGG | 0.624865 | 8.4:-47778156 | MS.gene34219:CDS |
| TACACGTTCTAGTTCATGCA+CGG | 0.628329 | 8.4:+47779498 | None:intergenic |
| GTCACAAATATCTTCTTCTG+AGG | 0.633804 | 8.4:+47778217 | None:intergenic |
| GTCCAGATAGCCACTCCAGA+TGG | 0.639689 | 8.4:-47778190 | MS.gene34219:CDS |
| AACGAACTCGAGACGTTCGT+AGG | 0.640436 | 8.4:+47781002 | None:intergenic |
| CGTCAACGGAGGTGTAAGAG+AGG | 0.656064 | 8.4:+47780938 | None:intergenic |
| TACCATCAAGGCCTTTACAA+GGG | 0.658897 | 8.4:+47779449 | None:intergenic |
| CTGGAGTCTACCATCTGGAG+TGG | 0.672296 | 8.4:+47778180 | None:intergenic |
| AACAGCATTGAGAAAGACGA+AGG | 0.690091 | 8.4:-47778244 | MS.gene34219:intron |
| TGGAGTGGCTATCTGGACAG+AGG | 0.691402 | 8.4:+47778195 | None:intergenic |
| TGGTAGACTCCAGATGTTAG+GGG | 0.698473 | 8.4:-47778170 | MS.gene34219:CDS |
| GAGTTGACCAGCGTCAACGG+AGG | 0.701883 | 8.4:+47780927 | None:intergenic |
| GAAGATGGAAGATTCAATTG+CGG | 0.703515 | 8.4:-47781112 | MS.gene34219:CDS |
| CCGAATCATCAAGGACGCCG+CGG | 0.727934 | 8.4:+47778114 | None:intergenic |
| GAAGGATGCACAGAACTCCG+CGG | 0.742068 | 8.4:-47778131 | MS.gene34219:CDS |
| TGCTGACATTAGCAGCACGT+AGG | 0.745064 | 8.4:+47780899 | None:intergenic |
| AGGTTGAGATAAGACAATCG+AGG | 0.766851 | 8.4:-47779624 | MS.gene34219:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATAACGAATTAATT+AGG | + | chr8.4:47778860-47778879 | None:intergenic | 10.0% |
| !! | TTCTTATAATTAACTAATTA+AGG | + | chr8.4:47780271-47780290 | None:intergenic | 10.0% |
| !!! | AATTTTTCTTTTAATTTTGT+TGG | - | chr8.4:47778585-47778604 | MS.gene34219:intron | 10.0% |
| !! | TAGATTTATTTAATTGGAAA+AGG | - | chr8.4:47778798-47778817 | MS.gene34219:intron | 15.0% |
| !!! | ATTTTGATCTTAAGAAATTA+TGG | - | chr8.4:47778538-47778557 | MS.gene34219:intron | 15.0% |
| !!! | TTTTGATCTTAAGAAATTAT+GGG | - | chr8.4:47778539-47778558 | MS.gene34219:intron | 15.0% |
| !! | AAGTAAGAAATCAGTTTAAA+AGG | + | chr8.4:47780931-47780950 | None:intergenic | 20.0% |
| !! | TATTATTTCATATACTCAAG+TGG | - | chr8.4:47780303-47780322 | MS.gene34219:intron | 20.0% |
| !!! | AATTTTACAATACCCAAATT+GGG | - | chr8.4:47780194-47780213 | MS.gene34219:intron | 20.0% |
| !!! | TAAAATTCTAAGACTTTATC+AGG | + | chr8.4:47780181-47780200 | None:intergenic | 20.0% |
| ! | AAAAATTACGAGCATTTATC+AGG | + | chr8.4:47779446-47779465 | None:intergenic | 25.0% |
| ! | AAGAAATCAGTTTAAAAGGA+GGG | + | chr8.4:47780927-47780946 | None:intergenic | 25.0% |
| ! | AATCAATTAACATCCCAATT+TGG | + | chr8.4:47780210-47780229 | None:intergenic | 25.0% |
| ! | AGAAGTTATATGCAATTTGT+GGG | - | chr8.4:47779799-47779818 | MS.gene34219:intron | 25.0% |
| ! | ATCAATTAACATCCCAATTT+GGG | + | chr8.4:47780209-47780228 | None:intergenic | 25.0% |
| ! | GCTTAAAAACATAGTTACAT+TGG | + | chr8.4:47779185-47779204 | None:intergenic | 25.0% |
| ! | TAACCTATTTACCAAAATGT+TGG | + | chr8.4:47779207-47779226 | None:intergenic | 25.0% |
| ! | TAAGAAATCAGTTTAAAAGG+AGG | + | chr8.4:47780928-47780947 | None:intergenic | 25.0% |
| ! | TCAAATTATAGGATCAATCA+AGG | - | chr8.4:47780335-47780354 | MS.gene34219:intron | 25.0% |
| ! | TGGGACTAGATTTATTTAAT+TGG | - | chr8.4:47778792-47778811 | MS.gene34219:intron | 25.0% |
| ! | TTTGGTAAATAGGTTAGAAT+GGG | - | chr8.4:47779211-47779230 | MS.gene34219:intron | 25.0% |
| !! | AAGTTAATGACCATGATTTT+AGG | - | chr8.4:47779272-47779291 | MS.gene34219:intron | 25.0% |
| !! | ATTAAGGCAGACTTTTTAAA+TGG | + | chr8.4:47780255-47780274 | None:intergenic | 25.0% |
| !! | CACATAACATTTTTGTTAAC+CGG | - | chr8.4:47780055-47780074 | MS.gene34219:intron | 25.0% |
| !! | GAATTTTACAATACCCAAAT+TGG | - | chr8.4:47780193-47780212 | MS.gene34219:intron | 25.0% |
| !! | TAAATGCTCGTAATTTTTGT+TGG | - | chr8.4:47779448-47779467 | MS.gene34219:CDS | 25.0% |
| !! | TTTTGGTAAATAGGTTAGAA+TGG | - | chr8.4:47779210-47779229 | MS.gene34219:intron | 25.0% |
| !!! | ATGTTTTTAAGCCAACATTT+TGG | - | chr8.4:47779193-47779212 | MS.gene34219:intron | 25.0% |
| !!! | ATTCATGTGTATTTTCTAGT+TGG | - | chr8.4:47780498-47780517 | MS.gene34219:intron | 25.0% |
| !!! | GATTTTGGTATTGTTTTGTA+TGG | - | chr8.4:47778441-47778460 | MS.gene34219:intron | 25.0% |
| AAAAAATGATGAGGATGGAT+GGG | - | chr8.4:47780007-47780026 | MS.gene34219:intron | 30.0% | |
| AAAACATTCATTCATAGTCG+TGG | - | chr8.4:47779900-47779919 | MS.gene34219:intron | 30.0% | |
| AAACCAAAAAATGATGAGGA+TGG | - | chr8.4:47780002-47780021 | MS.gene34219:intron | 30.0% | |
| AACTGTAGTAACTTAGTTTC+AGG | + | chr8.4:47778834-47778853 | None:intergenic | 30.0% | |
| AATAGTTTGGAAATATACGC+AGG | - | chr8.4:47779973-47779992 | MS.gene34219:intron | 30.0% | |
| AATTGCATATAACTTCTGCT+TGG | + | chr8.4:47779796-47779815 | None:intergenic | 30.0% | |
| AGTTATAGCTTCCATTTGTT+AGG | - | chr8.4:47780088-47780107 | MS.gene34219:intron | 30.0% | |
| ATGAGATCTGTCAAAAGAAT+GGG | - | chr8.4:47779550-47779569 | MS.gene34219:CDS | 30.0% | |
| CAGAAGTTATATGCAATTTG+TGG | - | chr8.4:47779798-47779817 | MS.gene34219:intron | 30.0% | |
| CATTGCAAATTATAGTGGTA+GGG | + | chr8.4:47779867-47779886 | None:intergenic | 30.0% | |
| CTCAAAACTATTCTTGTATG+CGG | - | chr8.4:47779365-47779384 | MS.gene34219:intron | 30.0% | |
| CTCGAGTTTATCTTCATATT+AGG | + | chr8.4:47780805-47780824 | None:intergenic | 30.0% | |
| GATATGAATCATTCACTAGA+AGG | + | chr8.4:47780233-47780252 | None:intergenic | 30.0% | |
| GCTATAACTTAAAACTGTTC+CGG | + | chr8.4:47780077-47780096 | None:intergenic | 30.0% | |
| GGAGACAAATCTCAAATTAT+AGG | - | chr8.4:47780324-47780343 | MS.gene34219:intron | 30.0% | |
| TATGAGATCTGTCAAAAGAA+TGG | - | chr8.4:47779549-47779568 | MS.gene34219:CDS | 30.0% | |
| TATGCCATTGCAAATTATAG+TGG | + | chr8.4:47779872-47779891 | None:intergenic | 30.0% | |
| TGAGAAACCAAAAAATGATG+AGG | - | chr8.4:47779998-47780017 | MS.gene34219:intron | 30.0% | |
| TGATCTTAAGAAATTATGGG+TGG | - | chr8.4:47778542-47778561 | MS.gene34219:intron | 30.0% | |
| ! | ACTCGAGCGATAATAATTTT+TGG | - | chr8.4:47780818-47780837 | MS.gene34219:CDS | 30.0% |
| ! | TACATGTGTTATTGTCATGT+TGG | - | chr8.4:47778689-47778708 | MS.gene34219:intron | 30.0% |
| ! | TTTTGTTGGCAGATATTAAG+AGG | - | chr8.4:47779462-47779481 | MS.gene34219:CDS | 30.0% |
| !! | AAGCCAACATTTTGGTAAAT+AGG | - | chr8.4:47779201-47779220 | MS.gene34219:intron | 30.0% |
| !! | ACACACACATGATTGATTTT+TGG | + | chr8.4:47779027-47779046 | None:intergenic | 30.0% |
| !! | CACACACATGATTGATTTTT+GGG | + | chr8.4:47779026-47779045 | None:intergenic | 30.0% |
| !! | TATTGTTTTGTATGGTGGTT+CGG | - | chr8.4:47778449-47778468 | MS.gene34219:intron | 30.0% |
| !! | TTTGGTATTGTTTTGTATGG+TGG | - | chr8.4:47778444-47778463 | MS.gene34219:intron | 30.0% |
| AATAGGTTAGATGGTATAGC+AGG | - | chr8.4:47779307-47779326 | MS.gene34219:intron | 35.0% | |
| AATAGTAACACTGGATGATC+TGG | - | chr8.4:47779497-47779516 | MS.gene34219:CDS | 35.0% | |
| ACAACATCAGCAAGAATCTT+CGG | + | chr8.4:47778483-47778502 | None:intergenic | 35.0% | |
| ACAATCCATCGTATCATTTG+AGG | + | chr8.4:47778992-47779011 | None:intergenic | 35.0% | |
| AGGTGTAAGAGAGGAAAATA+TGG | + | chr8.4:47778257-47778276 | None:intergenic | 35.0% | |
| ATAGGTTAGAATGGGATAGT+AGG | - | chr8.4:47779219-47779238 | MS.gene34219:intron | 35.0% | |
| ATAGGTTAGATGGTATAGCA+GGG | - | chr8.4:47779308-47779327 | MS.gene34219:intron | 35.0% | |
| ATTATGTGTTCAAACTCGGA+CGG | + | chr8.4:47778922-47778941 | None:intergenic | 35.0% | |
| CAAAAAATGATGAGGATGGA+TGG | - | chr8.4:47780006-47780025 | MS.gene34219:intron | 35.0% | |
| CATTTGGCAAATAGGTTAGA+TGG | - | chr8.4:47779298-47779317 | MS.gene34219:intron | 35.0% | |
| CCAAATGTTGCCTAAAATCA+TGG | + | chr8.4:47779285-47779304 | None:intergenic | 35.0% | |
| CCATTGCAAATTATAGTGGT+AGG | + | chr8.4:47779868-47779887 | None:intergenic | 35.0% | |
| CCCATAATCAATGTAAACCT+GGG | + | chr8.4:47778776-47778795 | None:intergenic | 35.0% | |
| CTGTCAAAAGAATGGGAAAA+AGG | - | chr8.4:47779557-47779576 | MS.gene34219:CDS | 35.0% | |
| GAAAAGGAAAGATAAACCAG+AGG | + | chr8.4:47780578-47780597 | None:intergenic | 35.0% | |
| GAAGATGGAAGATTCAATTG+CGG | - | chr8.4:47778089-47778108 | MS.gene34219:CDS | 35.0% | |
| GATCAATCAAGGATTCTGAT+AGG | - | chr8.4:47780346-47780365 | MS.gene34219:intron | 35.0% | |
| GGAGATTATGTGTTCAAACT+CGG | + | chr8.4:47778926-47778945 | None:intergenic | 35.0% | |
| GTCACAAATATCTTCTTCTG+AGG | + | chr8.4:47780987-47781006 | None:intergenic | 35.0% | |
| TAATCTCCAACTCTTTATCC+TGG | - | chr8.4:47778938-47778957 | MS.gene34219:intron | 35.0% | |
| TAGGTTAGAATGGGATAGTA+GGG | - | chr8.4:47779220-47779239 | MS.gene34219:intron | 35.0% | |
| TCCCATAATCAATGTAAACC+TGG | + | chr8.4:47778777-47778796 | None:intergenic | 35.0% | |
| TGTTATTGTCATGTTGGTGT+GGG | - | chr8.4:47778695-47778714 | MS.gene34219:intron | 35.0% | |
| TTAGGCAACATTTGGCAAAT+AGG | - | chr8.4:47779290-47779309 | MS.gene34219:intron | 35.0% | |
| TTTCCAAACTATTCTACCAG+AGG | + | chr8.4:47779966-47779985 | None:intergenic | 35.0% | |
| TTTCCTCTGGTAGAATAGTT+TGG | - | chr8.4:47779960-47779979 | MS.gene34219:intron | 35.0% | |
| ! | ACCCAGGTTTACATTGATTA+TGG | - | chr8.4:47778772-47778791 | MS.gene34219:intron | 35.0% |
| ! | AGATCATCCAGTGTTACTAT+TGG | + | chr8.4:47779498-47779517 | None:intergenic | 35.0% |
| ! | AGTGACTTGAAGCTAGATTT+TGG | - | chr8.4:47780427-47780446 | MS.gene34219:intron | 35.0% |
| ! | ATCTTTCCTTTTCTGCTGTA+AGG | - | chr8.4:47780585-47780604 | MS.gene34219:intron | 35.0% |
| ! | ATTGGTGGTAAGCAACATTT+GGG | + | chr8.4:47779069-47779088 | None:intergenic | 35.0% |
| ! | CCATGATTTTAGGCAACATT+TGG | - | chr8.4:47779282-47779301 | MS.gene34219:intron | 35.0% |
| ! | CCCAGGTTTACATTGATTAT+GGG | - | chr8.4:47778773-47778792 | MS.gene34219:intron | 35.0% |
| ! | CCTACCACTATAATTTGCAA+TGG | - | chr8.4:47779865-47779884 | MS.gene34219:intron | 35.0% |
| ! | GCAGATATTAAGAGGTCTTT+TGG | - | chr8.4:47779470-47779489 | MS.gene34219:CDS | 35.0% |
| ! | GCATATTCTAGAAGAAAGTG+AGG | - | chr8.4:47780377-47780396 | MS.gene34219:intron | 35.0% |
| ! | GTGACTTGAAGCTAGATTTT+GGG | - | chr8.4:47780428-47780447 | MS.gene34219:intron | 35.0% |
| ! | GTTGAACGTGAGAATGATTT+TGG | - | chr8.4:47778426-47778445 | MS.gene34219:intron | 35.0% |
| !! | CAATTTCAAAGGTACCATCA+AGG | + | chr8.4:47779767-47779786 | None:intergenic | 35.0% |
| !! | CTTTCTTCTAGAATATGCCT+AGG | + | chr8.4:47780375-47780394 | None:intergenic | 35.0% |
| !! | GTTTACCTGTATACTGGTTT+AGG | + | chr8.4:47779837-47779856 | None:intergenic | 35.0% |
| !!! | AGCTAGATTTTGGGATAGTT+TGG | - | chr8.4:47780437-47780456 | MS.gene34219:intron | 35.0% |
| !!! | CATCCATCCTCATCATTTTT+TGG | + | chr8.4:47780008-47780027 | None:intergenic | 35.0% |
| !!! | GTATTTTCTAGTTGGTCGTT+AGG | - | chr8.4:47780506-47780525 | MS.gene34219:intron | 35.0% |
| AACCTCCTCAAATGATACGA+TGG | - | chr8.4:47778984-47779003 | MS.gene34219:intron | 40.0% | |
| AAGTGCATCTTCTTGTCATC+TGG | - | chr8.4:47779937-47779956 | MS.gene34219:intron | 40.0% | |
| ACGATGAAGACCATGATTGA+CGG | + | chr8.4:47778349-47778368 | None:intergenic | 40.0% | |
| AGATCACCTTACAGCAGAAA+AGG | + | chr8.4:47780594-47780613 | None:intergenic | 40.0% | |
| AGCAGTGTTTACCTGTATAC+TGG | + | chr8.4:47779843-47779862 | None:intergenic | 40.0% | |
| AGGTTGAGATAAGACAATCG+AGG | - | chr8.4:47779577-47779596 | MS.gene34219:CDS | 40.0% | |
| ATCCATCGTATCATTTGAGG+AGG | + | chr8.4:47778989-47779008 | None:intergenic | 40.0% | |
| ATCGTATCATTTGAGGAGGT+TGG | + | chr8.4:47778985-47779004 | None:intergenic | 40.0% | |
| ATGAACTCCAAAACCACCAT+TGG | + | chr8.4:47779087-47779106 | None:intergenic | 40.0% | |
| ATGGTAGACTCCAGATGTTA+GGG | - | chr8.4:47781030-47781049 | MS.gene34219:CDS | 40.0% | |
| ATTGCGAGTCAAGTAAGTGA+GGG | - | chr8.4:47780470-47780489 | MS.gene34219:intron | 40.0% | |
| CAATTTGTGGGACGAAAAAG+TGG | - | chr8.4:47779811-47779830 | MS.gene34219:intron | 40.0% | |
| CGTCTTTCTCAATGCTGTTA+CGG | + | chr8.4:47780956-47780975 | None:intergenic | 40.0% | |
| CTTGGCTGCTTCAATTTCAA+AGG | + | chr8.4:47779778-47779797 | None:intergenic | 40.0% | |
| GAGATAAGACAATCGAGGAA+TGG | - | chr8.4:47779582-47779601 | MS.gene34219:CDS | 40.0% | |
| TACCATCAAGGCCTTTACAA+GGG | + | chr8.4:47779755-47779774 | None:intergenic | 40.0% | |
| TAGGTTAGATGGTATAGCAG+GGG | - | chr8.4:47779309-47779328 | MS.gene34219:intron | 40.0% | |
| TATTGCGAGTCAAGTAAGTG+AGG | - | chr8.4:47780469-47780488 | MS.gene34219:intron | 40.0% | |
| TCATTCACGACATGGTATCA+TGG | - | chr8.4:47779159-47779178 | MS.gene34219:intron | 40.0% | |
| TCGTATCATTTGAGGAGGTT+GGG | + | chr8.4:47778984-47779003 | None:intergenic | 40.0% | |
| TCTATGTAAACTTGCAACCC+AGG | - | chr8.4:47778756-47778775 | MS.gene34219:intron | 40.0% | |
| TGAGTTCCAGGATAAAGAGT+TGG | + | chr8.4:47778947-47778966 | None:intergenic | 40.0% | |
| TGTTAGGGGATGAAAAGTCT+CGG | - | chr8.4:47781045-47781064 | MS.gene34219:CDS | 40.0% | |
| ! | AACAGCATTGAGAAAGACGA+AGG | - | chr8.4:47780957-47780976 | MS.gene34219:CDS | 40.0% |
| ! | ACTTTTCATCCCCTAACATC+TGG | + | chr8.4:47781043-47781062 | None:intergenic | 40.0% |
| ! | CAAATGTTGCTTACCACCAA+TGG | - | chr8.4:47779068-47779087 | MS.gene34219:intron | 40.0% |
| ! | CATTGGTGGTAAGCAACATT+TGG | + | chr8.4:47779070-47779089 | None:intergenic | 40.0% |
| ! | CTTCTAGAAGCTTCTTGTTG+AGG | + | chr8.4:47778143-47778162 | None:intergenic | 40.0% |
| ! | GTGTTATTGTCATGTTGGTG+TGG | - | chr8.4:47778694-47778713 | MS.gene34219:intron | 40.0% |
| ! | GTTCAACTAGTTTGAGTTCC+AGG | + | chr8.4:47778959-47778978 | None:intergenic | 40.0% |
| ! | TGTCTATGTTGATGGAGAGT+TGG | - | chr8.4:47779623-47779642 | MS.gene34219:CDS | 40.0% |
| ! | TTGGTGGTAAGCAACATTTG+GGG | + | chr8.4:47779068-47779087 | None:intergenic | 40.0% |
| ! | TTTGGAGCCAATAGTAACAC+TGG | - | chr8.4:47779488-47779507 | MS.gene34219:CDS | 40.0% |
| !! | GTATGAAGGCACCTAACAAA+TGG | + | chr8.4:47780102-47780121 | None:intergenic | 40.0% |
| !! | TACACGTTCTAGTTCATGCA+CGG | + | chr8.4:47779706-47779725 | None:intergenic | 40.0% |
| !! | TAGGAGCATAGCTTTGGATT+AGG | - | chr8.4:47780544-47780563 | MS.gene34219:intron | 40.0% |
| !!! | GGTTTTGGAGTTCATGATGT+GGG | - | chr8.4:47779092-47779111 | MS.gene34219:intron | 40.0% |
| !!! | TGGTTTTGGAGTTCATGATG+TGG | - | chr8.4:47779091-47779110 | MS.gene34219:intron | 40.0% |
| AACTCCAAAACCACCATTGG+TGG | + | chr8.4:47779084-47779103 | None:intergenic | 45.0% | |
| ACTGCCAGTGTCTATGTTGA+TGG | - | chr8.4:47779615-47779634 | MS.gene34219:CDS | 45.0% | |
| AGACATGTGACCAGGTATGA+AGG | + | chr8.4:47780116-47780135 | None:intergenic | 45.0% | |
| AGGATTCTGATAGGACACCT+AGG | - | chr8.4:47780355-47780374 | MS.gene34219:intron | 45.0% | |
| AGTGGCCTAAACCAGTATAC+AGG | - | chr8.4:47779829-47779848 | MS.gene34219:intron | 45.0% | |
| ATCAAGGCCTTTACAAGGGT+CGG | + | chr8.4:47779751-47779770 | None:intergenic | 45.0% | |
| ATGATGTCCGACCCTTGTAA+AGG | - | chr8.4:47779741-47779760 | MS.gene34219:intron | 45.0% | |
| CTAGAAGAAAGTGAGGCCAT+GGG | - | chr8.4:47780384-47780403 | MS.gene34219:intron | 45.0% | |
| CTCTCCATCAACATAGACAC+TGG | + | chr8.4:47779622-47779641 | None:intergenic | 45.0% | |
| CTGATCAGAAGGACATTGCA+AGG | - | chr8.4:47779661-47779680 | MS.gene34219:CDS | 45.0% | |
| GAATGCACTCTGTCTTTGGT+TGG | - | chr8.4:47779131-47779150 | MS.gene34219:intron | 45.0% | |
| GATGGTAGACTCCAGATGTT+AGG | - | chr8.4:47781029-47781048 | MS.gene34219:CDS | 45.0% | |
| GCATGAATGCACTCTGTCTT+TGG | - | chr8.4:47779127-47779146 | MS.gene34219:intron | 45.0% | |
| GCTACTCAGAGAAGTGAAGA+AGG | + | chr8.4:47780708-47780727 | None:intergenic | 45.0% | |
| GTACCATCAAGGCCTTTACA+AGG | + | chr8.4:47779756-47779775 | None:intergenic | 45.0% | |
| TACGAGCATTTATCAGGCAG+TGG | + | chr8.4:47779440-47779459 | None:intergenic | 45.0% | |
| TACTGCTTGCTCTGATCAGA+AGG | - | chr8.4:47779650-47779669 | MS.gene34219:CDS | 45.0% | |
| TAGAAGAAAGTGAGGCCATG+GGG | - | chr8.4:47780385-47780404 | MS.gene34219:intron | 45.0% | |
| TAGGAGAGTTTCTCTCTGGT+AGG | - | chr8.4:47780525-47780544 | MS.gene34219:intron | 45.0% | |
| TAGTTCATGCACGGCAATCT+TGG | + | chr8.4:47779697-47779716 | None:intergenic | 45.0% | |
| TCGTTAGGAGAGTTTCTCTC+TGG | - | chr8.4:47780521-47780540 | MS.gene34219:intron | 45.0% | |
| TCTAGAAGAAAGTGAGGCCA+TGG | - | chr8.4:47780383-47780402 | MS.gene34219:intron | 45.0% | |
| TCTTGTATGCGGTTGTGTGT+TGG | - | chr8.4:47779376-47779395 | MS.gene34219:CDS | 45.0% | |
| TGGTAGACTCCAGATGTTAG+GGG | - | chr8.4:47781031-47781050 | MS.gene34219:CDS | 45.0% | |
| TTGCGAGTCAAGTAAGTGAG+GGG | - | chr8.4:47780471-47780490 | MS.gene34219:intron | 45.0% | |
| TTGTAAGGCCCGAATCATCA+AGG | + | chr8.4:47781099-47781118 | None:intergenic | 45.0% | |
| TTGTTAGGTGCCTTCATACC+TGG | - | chr8.4:47780103-47780122 | MS.gene34219:intron | 45.0% | |
| TTTACAAGGGTCGGACATCA+TGG | + | chr8.4:47779742-47779761 | None:intergenic | 45.0% | |
| ! | AACATCTGGAGTCTACCATC+TGG | + | chr8.4:47781029-47781048 | None:intergenic | 45.0% |
| ! | ATAGACACTGGCAGTGCTTT+TGG | + | chr8.4:47779610-47779629 | None:intergenic | 45.0% |
| ! | ATGATTCGGGCCTTACAACA+AGG | - | chr8.4:47781101-47781120 | MS.gene34219:CDS | 45.0% |
| ! | ATGTTGCTTACCACCAATGG+TGG | - | chr8.4:47779071-47779090 | MS.gene34219:intron | 45.0% |
| ! | CTTACCACCAATGGTGGTTT+TGG | - | chr8.4:47779077-47779096 | MS.gene34219:intron | 45.0% |
| ! | GGATTCAGGGTAAGAAGTGT+GGG | + | chr8.4:47778175-47778194 | None:intergenic | 45.0% |
| ! | GTTCGTAGGAAACGGATTCA+GGG | + | chr8.4:47778188-47778207 | None:intergenic | 45.0% |
| ! | GTTTTCTGTATGACGCAAGC+AGG | + | chr8.4:47780153-47780172 | None:intergenic | 45.0% |
| ! | TAAGCAACATTTGGGGTTGG+TGG | + | chr8.4:47779061-47779080 | None:intergenic | 45.0% |
| ! | TCTTGTCATCTGGTTTCCTC+TGG | - | chr8.4:47779947-47779966 | MS.gene34219:intron | 45.0% |
| ! | TGGTAAGCAACATTTGGGGT+TGG | + | chr8.4:47779064-47779083 | None:intergenic | 45.0% |
| !! | ATCTCATAGAGCGTTGTCAC+CGG | + | chr8.4:47779537-47779556 | None:intergenic | 45.0% |
| !! | CACATACTGGCCTTGTTGTA+AGG | + | chr8.4:47781114-47781133 | None:intergenic | 45.0% |
| !! | GATTCGTGAGTTTGCTGATG+CGG | - | chr8.4:47778404-47778423 | MS.gene34219:intron | 45.0% |
| !!! | TTCGTTGGTGACGCTGTTTT+GGG | - | chr8.4:47778216-47778235 | MS.gene34219:CDS | 45.0% |
| AACGAACTCGAGACGTTCGT+AGG | + | chr8.4:47778202-47778221 | None:intergenic | 50.0% | |
| AACTTCCATTCTCTCCCCCA+TGG | + | chr8.4:47780403-47780422 | None:intergenic | 50.0% | |
| AGAAGAAAGTGAGGCCATGG+GGG | - | chr8.4:47780386-47780405 | MS.gene34219:intron | 50.0% | |
| AGAGAGTTGACCAGCGTCAA+CGG | + | chr8.4:47778280-47778299 | None:intergenic | 50.0% | |
| ATGGGGGAGAGAATGGAAGT+TGG | - | chr8.4:47780402-47780421 | MS.gene34219:intron | 50.0% | |
| CAGGCAGTGGCAAAGTTGTT+TGG | + | chr8.4:47779427-47779446 | None:intergenic | 50.0% | |
| CGGATTCAGGGTAAGAAGTG+TGG | + | chr8.4:47778176-47778195 | None:intergenic | 50.0% | |
| CTCGAGACGTTCGTAGGAAA+CGG | + | chr8.4:47778196-47778215 | None:intergenic | 50.0% | |
| CTGTGTCTAGACATGTGACC+AGG | + | chr8.4:47780124-47780143 | None:intergenic | 50.0% | |
| GACCCTTGTAAAGGCCTTGA+TGG | - | chr8.4:47779750-47779769 | MS.gene34219:intron | 50.0% | |
| GCACTCTGTCTTTGGTTGGA+CGG | - | chr8.4:47779135-47779154 | MS.gene34219:intron | 50.0% | |
| GCGGCAGTGGAGAAGATAAT+TGG | - | chr8.4:47778108-47778127 | MS.gene34219:CDS | 50.0% | |
| GGAAGATTCAATTGCGGCAG+TGG | - | chr8.4:47778095-47778114 | MS.gene34219:CDS | 50.0% | |
| GGATGAAAAGTCTCGGCTGA+AGG | - | chr8.4:47781052-47781071 | MS.gene34219:CDS | 50.0% | |
| TACGAACGTCTCGAGTTCGT+TGG | - | chr8.4:47778201-47778220 | MS.gene34219:CDS | 50.0% | |
| TGCTCCTACCAGCGTGAAAA+AGG | + | chr8.4:47780634-47780653 | None:intergenic | 50.0% | |
| TGCTGACATTAGCAGCACGT+AGG | + | chr8.4:47778305-47778324 | None:intergenic | 50.0% | |
| TGGACGGTTCATTCACGACA+TGG | - | chr8.4:47779151-47779170 | MS.gene34219:intron | 50.0% | |
| TGGTGTGGGACACTAAGTGT+CGG | - | chr8.4:47778709-47778728 | MS.gene34219:intron | 50.0% | |
| ! | CGTTCGTAGGAAACGGATTC+AGG | + | chr8.4:47778189-47778208 | None:intergenic | 50.0% |
| ! | CTCTGGTAGGAGCATAGCTT+TGG | - | chr8.4:47780538-47780557 | MS.gene34219:intron | 50.0% |
| ! | TACCATCTGGAGTGGCTATC+TGG | + | chr8.4:47781016-47781035 | None:intergenic | 50.0% |
| ! | TCTGGAACGAAAACCGCAAC+CGG | - | chr8.4:47779515-47779534 | MS.gene34219:CDS | 50.0% |
| !! | CTGTGCAACCTTTTTCACGC+TGG | - | chr8.4:47780623-47780642 | MS.gene34219:intron | 50.0% |
| !! | GCAACCTTTTTCACGCTGGT+AGG | - | chr8.4:47780627-47780646 | MS.gene34219:intron | 50.0% |
| !!! | GTTCGTTGGTGACGCTGTTT+TGG | - | chr8.4:47778215-47778234 | MS.gene34219:CDS | 50.0% |
| AGGGTCGGACATCATGGTAG+TGG | + | chr8.4:47779736-47779755 | None:intergenic | 55.0% | |
| CTGGAGTCTACCATCTGGAG+TGG | + | chr8.4:47781024-47781043 | None:intergenic | 55.0% | |
| GAAGGATGCACAGAACTCCG+CGG | - | chr8.4:47781070-47781089 | MS.gene34219:CDS | 55.0% | |
| GGATTAGGACTCTCTGCCTC+TGG | - | chr8.4:47780559-47780578 | MS.gene34219:intron | 55.0% | |
| GTCCAGATAGCCACTCCAGA+TGG | - | chr8.4:47781011-47781030 | MS.gene34219:CDS | 55.0% | |
| TCTTACACCTCCGTTGACGC+TGG | - | chr8.4:47778267-47778286 | MS.gene34219:intron | 55.0% | |
| TGGAGTGGCTATCTGGACAG+AGG | + | chr8.4:47781009-47781028 | None:intergenic | 55.0% | |
| ! | CGTCAACGGAGGTGTAAGAG+AGG | + | chr8.4:47778266-47778285 | None:intergenic | 55.0% |
| !! | TAGAGCGTTGTCACCGGTTG+CGG | + | chr8.4:47779531-47779550 | None:intergenic | 55.0% |
| !! | TCGGACATCATGGTAGTGGC+AGG | + | chr8.4:47779732-47779751 | None:intergenic | 55.0% |
| CCGAATCATCAAGGACGCCG+CGG | + | chr8.4:47781090-47781109 | None:intergenic | 60.0% | |
| GAGTTGACCAGCGTCAACGG+AGG | + | chr8.4:47778277-47778296 | None:intergenic | 60.0% | |
| GCTCGTGCAGCCGTCAATCA+TGG | - | chr8.4:47778336-47778355 | MS.gene34219:intron | 60.0% | |
| TGAGGCCATGGGGGAGAGAA+TGG | - | chr8.4:47780395-47780414 | MS.gene34219:intron | 60.0% | |
| ! | CCGCGGCGTCCTTGATGATT+CGG | - | chr8.4:47781087-47781106 | MS.gene34219:CDS | 60.0% |
| ! | CGCGGCGTCCTTGATGATTC+GGG | - | chr8.4:47781088-47781107 | MS.gene34219:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 47778087 | 47781136 | 47778087 | ID=MS.gene34219 |
| chr8.4 | mRNA | 47778087 | 47781136 | 47778087 | ID=MS.gene34219.t1;Parent=MS.gene34219 |
| chr8.4 | exon | 47780660 | 47781136 | 47780660 | ID=MS.gene34219.t1.exon1;Parent=MS.gene34219.t1 |
| chr8.4 | CDS | 47780660 | 47781136 | 47780660 | ID=cds.MS.gene34219.t1;Parent=MS.gene34219.t1 |
| chr8.4 | exon | 47779373 | 47779749 | 47779373 | ID=MS.gene34219.t1.exon2;Parent=MS.gene34219.t1 |
| chr8.4 | CDS | 47779373 | 47779749 | 47779373 | ID=cds.MS.gene34219.t1;Parent=MS.gene34219.t1 |
| chr8.4 | exon | 47778087 | 47778261 | 47778087 | ID=MS.gene34219.t1.exon3;Parent=MS.gene34219.t1 |
| chr8.4 | CDS | 47778087 | 47778261 | 47778087 | ID=cds.MS.gene34219.t1;Parent=MS.gene34219.t1 |
| Gene Sequence |
| Protein sequence |
