Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35071.t1 | XP_013457255.1 | 77.8 | 742 | 90 | 6 | 1 | 669 | 51 | 790 | 0.00E+00 | 1097.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35071.t1 | Q641I1 | 43.8 | 192 | 95 | 5 | 473 | 656 | 1176 | 1362 | 7.4e-36 | 153.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35071.t1 | A0A072UPJ0 | 77.8 | 742 | 90 | 6 | 1 | 669 | 51 | 790 | 0.0e+00 | 1097.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene35071 | 0.85719 | 1.93E-62 | -1.69E-46 |
| MS.gene049300 | MS.gene35071 | 0.802971 | 4.36E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene35071 | 0.819243 | 1.29E-52 | -1.69E-46 |
| MS.gene049744 | MS.gene35071 | 0.838549 | 2.69E-57 | -1.69E-46 |
| MS.gene050257 | MS.gene35071 | 0.814133 | 1.80E-51 | -1.69E-46 |
| MS.gene050258 | MS.gene35071 | 0.826379 | 2.80E-54 | -1.69E-46 |
| MS.gene050348 | MS.gene35071 | 0.831272 | 1.83E-55 | -1.69E-46 |
| MS.gene050551 | MS.gene35071 | 0.800291 | 1.54E-48 | -1.69E-46 |
| MS.gene051247 | MS.gene35071 | 0.801916 | 7.18E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene35071 | 0.803664 | 3.13E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene35071 | 0.855041 | 8.23E-62 | -1.69E-46 |
| MS.gene051800 | MS.gene35071 | 0.805406 | 1.36E-49 | -1.69E-46 |
| MS.gene052168 | MS.gene35071 | 0.802043 | 6.76E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene35071 | 0.844682 | 6.50E-59 | -1.69E-46 |
| MS.gene052311 | MS.gene35071 | 0.825552 | 4.41E-54 | -1.69E-46 |
| MS.gene052609 | MS.gene35071 | 0.866758 | 2.26E-65 | -1.69E-46 |
| MS.gene052775 | MS.gene35071 | 0.829819 | 4.16E-55 | -1.69E-46 |
| MS.gene052776 | MS.gene35071 | 0.801432 | 9.03E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene35071 | 0.824959 | 6.08E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene35071 | 0.809431 | 1.90E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene35071 | 0.82182 | 3.29E-53 | -1.69E-46 |
| MS.gene053296 | MS.gene35071 | 0.811948 | 5.42E-51 | -1.69E-46 |
| MS.gene053621 | MS.gene35071 | 0.805133 | 1.55E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene35071 | 0.811937 | 5.45E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene35071 | 0.813657 | 2.29E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene35071 | 0.807395 | 5.16E-50 | -1.69E-46 |
| MS.gene054943 | MS.gene35071 | 0.823207 | 1.57E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene35071 | 0.837066 | 6.47E-57 | -1.69E-46 |
| MS.gene056050 | MS.gene35071 | 0.840168 | 1.02E-57 | -1.69E-46 |
| MS.gene056308 | MS.gene35071 | 0.836554 | 8.74E-57 | -1.69E-46 |
| MS.gene056507 | MS.gene35071 | 0.841056 | 5.99E-58 | -1.69E-46 |
| MS.gene056519 | MS.gene35071 | 0.845352 | 4.28E-59 | -1.69E-46 |
| MS.gene05686 | MS.gene35071 | 0.830317 | 3.14E-55 | -1.69E-46 |
| MS.gene057132 | MS.gene35071 | 0.819866 | 9.27E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene35071 | 0.81081 | 9.58E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene35071 | 0.82287 | 1.88E-53 | -1.69E-46 |
| MS.gene058289 | MS.gene35071 | 0.816847 | 4.48E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene35071 | 0.816656 | 4.94E-52 | -1.69E-46 |
| MS.gene058633 | MS.gene35071 | 0.823756 | 1.17E-53 | -1.69E-46 |
| MS.gene058649 | MS.gene35071 | 0.838797 | 2.32E-57 | -1.69E-46 |
| MS.gene058919 | MS.gene35071 | 0.825788 | 3.87E-54 | -1.69E-46 |
| MS.gene059439 | MS.gene35071 | 0.826466 | 2.67E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene35071 | 0.857196 | 1.92E-62 | -1.69E-46 |
| MS.gene059634 | MS.gene35071 | 0.834822 | 2.40E-56 | -1.69E-46 |
| MS.gene060353 | MS.gene35071 | 0.805774 | 1.13E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene35071 | 0.803638 | 3.17E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene35071 | 0.814133 | 1.80E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene35071 | 0.800043 | 1.73E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 139 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAATTCTCTATTCAATTC+AGG | 0.191230 | 4.4:+20362179 | MS.gene35071:CDS |
| ATGCAGATGGTACAAAATTA+AGG | 0.250319 | 4.4:+20356653 | MS.gene35071:intron |
| GCTTCAGACATGTATATATT+TGG | 0.262432 | 4.4:+20360825 | MS.gene35071:CDS |
| AAGTGATCTCTTTCCTAAAA+AGG | 0.278922 | 4.4:+20361875 | MS.gene35071:CDS |
| CTCTATTCAATTCAGGGCTT+TGG | 0.283617 | 4.4:+20362186 | MS.gene35071:CDS |
| GATCTCATTCTACCTAGCTT+TGG | 0.303191 | 4.4:+20358216 | MS.gene35071:CDS |
| CTGACAATTTATGTAGAGTT+TGG | 0.303507 | 4.4:+20358110 | MS.gene35071:CDS |
| TGTAATCCCAGAAGAGCTTT+AGG | 0.305888 | 4.4:-20358742 | None:intergenic |
| ACGCGTTCTACAATAATAAT+AGG | 0.308080 | 4.4:-20360863 | None:intergenic |
| AGCAGCTCATATAGAGTTCT+TGG | 0.309109 | 4.4:+20363429 | MS.gene35071:CDS |
| TTGAATCAGATGATACAAAA+TGG | 0.314689 | 4.4:+20359727 | MS.gene35071:CDS |
| CTTTGTTATCTAAACATCTC+TGG | 0.315177 | 4.4:-20363490 | None:intergenic |
| GTATACCTATGTGTCGATAT+CGG | 0.316268 | 4.4:+20362130 | MS.gene35071:CDS |
| CGCATTATTGCCGTTTGAAT+AGG | 0.321311 | 4.4:-20360670 | None:intergenic |
| TTGAATTTCTGCGCAAATCC+TGG | 0.325382 | 4.4:+20360385 | MS.gene35071:CDS |
| CATGCTCCTATGACTGCTAC+TGG | 0.333893 | 4.4:+20358513 | MS.gene35071:CDS |
| AGATGATCATCCCAAGAAAA+AGG | 0.335417 | 4.4:-20359977 | None:intergenic |
| CATCCATCAACTGACCTTTA+CGG | 0.338542 | 4.4:+20362238 | MS.gene35071:CDS |
| ATCTCATTCTACCTAGCTTT+GGG | 0.349445 | 4.4:+20358217 | MS.gene35071:CDS |
| CCTGCCTTGCATATCTAATC+TGG | 0.357865 | 4.4:-20358174 | None:intergenic |
| ATCTGGCGACTTCAGAGAAA+TGG | 0.359053 | 4.4:+20361834 | MS.gene35071:intron |
| TCATACTGAACAACCCTTGC+CGG | 0.370087 | 4.4:-20356720 | None:intergenic |
| GGTCAGAGGAAGTTCGGATT+TGG | 0.373363 | 4.4:-20363330 | None:intergenic |
| AGATTCTTATCCCGGGATTC+CGG | 0.376738 | 4.4:+20356701 | MS.gene35071:CDS |
| GGCACTGACTTCTTCCTATC+AGG | 0.380030 | 4.4:-20359809 | None:intergenic |
| CCTAGCTTTGGGTGAATATG+AGG | 0.387440 | 4.4:+20358228 | MS.gene35071:CDS |
| GGAGAACTGAATGGTCAATA+TGG | 0.393372 | 4.4:+20360418 | MS.gene35071:CDS |
| GTCGATATCGGGTCCACACT+TGG | 0.395614 | 4.4:+20362142 | MS.gene35071:CDS |
| AATCACCTCAGCTGCCTGAT+AGG | 0.399955 | 4.4:+20359795 | MS.gene35071:CDS |
| AACAACCCTTGCCGGAATCC+CGG | 0.400097 | 4.4:-20356712 | None:intergenic |
| AATTAAGGTTACTATGAGAT+TGG | 0.402101 | 4.4:+20356668 | MS.gene35071:CDS |
| ATTGTTCACCATCAATACTT+TGG | 0.404100 | 4.4:-20359775 | None:intergenic |
| CGAATCAGCTCTTATATCTC+TGG | 0.407257 | 4.4:+20360023 | MS.gene35071:CDS |
| CGCGATGGTCAGAGGAAGTT+CGG | 0.414981 | 4.4:-20363336 | None:intergenic |
| CGAATTCTCTATTCAATTCA+GGG | 0.417165 | 4.4:+20362180 | MS.gene35071:CDS |
| GTAATCCCAGAAGAGCTTTA+GGG | 0.418437 | 4.4:-20358741 | None:intergenic |
| AGTGGGAGTAGCCAGCAAAA+TGG | 0.418914 | 4.4:+20360988 | MS.gene35071:CDS |
| ATGTCCTAAGCAATGGTTCC+AGG | 0.419292 | 4.4:+20360950 | MS.gene35071:CDS |
| GTGGGAGTAGCCAGCAAAAT+GGG | 0.420182 | 4.4:+20360989 | MS.gene35071:CDS |
| AATGAAGTTTGAATTCAAAC+TGG | 0.428284 | 4.4:-20360905 | None:intergenic |
| AGAAGACGCTGGAAAACTTT+CGG | 0.432504 | 4.4:+20362693 | MS.gene35071:CDS |
| ACTGTGCCCAGCAGCTTCTT+CGG | 0.435625 | 4.4:+20363255 | MS.gene35071:CDS |
| AACTTCAACGCTTCTTCCTA+CGG | 0.438744 | 4.4:+20363379 | MS.gene35071:CDS |
| GTATACAAGTATCTTAGATA+TGG | 0.439686 | 4.4:-20362113 | None:intergenic |
| TTCTGTTCAGCCTATTCAAA+CGG | 0.440789 | 4.4:+20360660 | MS.gene35071:intron |
| TTTGTTATCTAAACATCTCT+GGG | 0.444284 | 4.4:-20363489 | None:intergenic |
| ACTAAACTTGTTTGTGGACC+TGG | 0.445595 | 4.4:-20360968 | None:intergenic |
| TAATGCGTGCAGAACTTCAT+AGG | 0.447317 | 4.4:+20360686 | MS.gene35071:CDS |
| GCACGTGTCCAAAGTATTGA+TGG | 0.455150 | 4.4:+20359767 | MS.gene35071:CDS |
| TATACCTATGTGTCGATATC+GGG | 0.465136 | 4.4:+20362131 | MS.gene35071:CDS |
| ATGAAAGTATTCTCAAGATC+AGG | 0.468624 | 4.4:-20362266 | None:intergenic |
| AAATTGTCAGAACCTACTTC+AGG | 0.470222 | 4.4:-20358097 | None:intergenic |
| TTGGCTATTGAAGAAGTTCA+AGG | 0.476659 | 4.4:+20362205 | MS.gene35071:CDS |
| GTCTGATTTACAAGGTTCAC+TGG | 0.477160 | 4.4:+20358681 | MS.gene35071:CDS |
| ACTAACCCAGTAGCAGTCAT+AGG | 0.488470 | 4.4:-20358519 | None:intergenic |
| AGTTTGGATGATTGATGATA+CGG | 0.489447 | 4.4:+20358126 | MS.gene35071:CDS |
| GTTGGTGAAGATTCTTATCC+CGG | 0.489620 | 4.4:+20356693 | MS.gene35071:CDS |
| ACTCCCACTAAACTTGTTTG+TGG | 0.495464 | 4.4:-20360974 | None:intergenic |
| TGGACCTGGAACCATTGCTT+AGG | 0.495670 | 4.4:-20360954 | None:intergenic |
| CATCCGTAAAGGTCAGTTGA+TGG | 0.496688 | 4.4:-20362241 | None:intergenic |
| TTTCAGTCAAATCAATAGCT+TGG | 0.497020 | 4.4:-20359698 | None:intergenic |
| TGAATTTCTGCGCAAATCCT+GGG | 0.498276 | 4.4:+20360386 | MS.gene35071:CDS |
| AGGTCCACAAACAAGTTTAG+TGG | 0.498908 | 4.4:+20360970 | MS.gene35071:CDS |
| TGAGCTGCAGCTCCTGAAGT+AGG | 0.499693 | 4.4:+20358085 | MS.gene35071:intron |
| TCTGGCGACTTCAGAGAAAT+GGG | 0.501567 | 4.4:+20361835 | MS.gene35071:intron |
| AGGAACTTAAACACACTTAT+CGG | 0.501670 | 4.4:+20363403 | MS.gene35071:CDS |
| TTATCCCGGGATTCCGGCAA+GGG | 0.502957 | 4.4:+20356707 | MS.gene35071:CDS |
| GATATCAAGCTCAGCTTCGT+TGG | 0.503921 | 4.4:+20361933 | MS.gene35071:CDS |
| TTCTGAATCCCTACAGTCAC+TGG | 0.505193 | 4.4:-20359372 | None:intergenic |
| ACAACCCTTGCCGGAATCCC+GGG | 0.506959 | 4.4:-20356711 | None:intergenic |
| ATGTATTTCTGAAATTCCAC+AGG | 0.508977 | 4.4:+20360047 | MS.gene35071:CDS |
| TTTCGATGCAGATCAACAAT+CGG | 0.512442 | 4.4:+20360800 | MS.gene35071:intron |
| TTGCGCAGGTCTGATTTACA+AGG | 0.512635 | 4.4:+20358673 | MS.gene35071:intron |
| AATTACGCTGAAGATTATGT+TGG | 0.515085 | 4.4:+20359398 | MS.gene35071:CDS |
| AATAATTCCAGAAAGCATGA+TGG | 0.516655 | 4.4:+20362088 | MS.gene35071:intron |
| TAAGGTTACTATGAGATTGG+AGG | 0.517202 | 4.4:+20356671 | MS.gene35071:CDS |
| TCAATACTTTGGACACGTGC+TGG | 0.518051 | 4.4:-20359764 | None:intergenic |
| ATTACGCTGAAGATTATGTT+GGG | 0.519193 | 4.4:+20359399 | MS.gene35071:CDS |
| CTTATCCCGGGATTCCGGCA+AGG | 0.521440 | 4.4:+20356706 | MS.gene35071:CDS |
| GCAAATCCTGGGCTGTTGAT+CGG | 0.521937 | 4.4:+20360397 | MS.gene35071:CDS |
| GATGCTCATCAAAGCATTGA+TGG | 0.522659 | 4.4:+20359623 | MS.gene35071:CDS |
| TCTATTCTAGCAGAATGATA+AGG | 0.527610 | 4.4:-20363232 | None:intergenic |
| GAATTGTACCAGTGACTGTA+GGG | 0.527884 | 4.4:+20359364 | MS.gene35071:CDS |
| CCAGATTAGATATGCAAGGC+AGG | 0.531143 | 4.4:+20358174 | MS.gene35071:CDS |
| ACAGATGCTAAATAATTGCT+TGG | 0.532785 | 4.4:+20363306 | MS.gene35071:CDS |
| GGAAAGCATCAAACGTGGAT+AGG | 0.534823 | 4.4:-20358775 | None:intergenic |
| CATGATTACGCGATGGTCAG+AGG | 0.538432 | 4.4:-20363344 | None:intergenic |
| TGAACTTCTGTAGTAAGCTA+TGG | 0.539015 | 4.4:-20360508 | None:intergenic |
| TTCGATGCAGATCAACAATC+GGG | 0.540738 | 4.4:+20360801 | MS.gene35071:intron |
| CCTCATATTCACCCAAAGCT+AGG | 0.541430 | 4.4:-20358228 | None:intergenic |
| TCAACGCTTCTTCCTACGGC+AGG | 0.541831 | 4.4:+20363383 | MS.gene35071:CDS |
| GCAAGGGTTGTTCAGTATGA+AGG | 0.542623 | 4.4:+20356723 | MS.gene35071:CDS |
| TTTCATCTATAATCTTTCCA+AGG | 0.548074 | 4.4:+20362283 | MS.gene35071:CDS |
| TATATGCACAACAAAGTTGA+GGG | 0.548369 | 4.4:+20360473 | MS.gene35071:CDS |
| GGCGAGGCATATCACAAATG+AGG | 0.549481 | 4.4:+20360707 | MS.gene35071:CDS |
| GAATTCAAACTTCATTTCTG+TGG | 0.555232 | 4.4:+20360912 | MS.gene35071:CDS |
| TTCTTCCTATCAGGCAGCTG+AGG | 0.555795 | 4.4:-20359800 | None:intergenic |
| CTTGCATATCTAATCTGGAA+TGG | 0.563392 | 4.4:-20358169 | None:intergenic |
| AAAAGGTTGAACTGATTCCT+CGG | 0.567378 | 4.4:-20359960 | None:intergenic |
| CAGCTTCGTTGGTCATCTAT+CGG | 0.568337 | 4.4:+20361944 | MS.gene35071:CDS |
| GTTACTATGAGATTGGAGGT+TGG | 0.574527 | 4.4:+20356675 | MS.gene35071:CDS |
| TCGATATCGGGTCCACACTT+GGG | 0.574688 | 4.4:+20362143 | MS.gene35071:CDS |
| TGAATTGTACCAGTGACTGT+AGG | 0.582373 | 4.4:+20359363 | MS.gene35071:CDS |
| AGTTCTCCGATCAACAGCCC+AGG | 0.586596 | 4.4:-20360403 | None:intergenic |
| TGGCTATTGAAGAAGTTCAA+GGG | 0.589842 | 4.4:+20362206 | MS.gene35071:CDS |
| AATAATAATAGGAACAAGCA+AGG | 0.592409 | 4.4:-20360852 | None:intergenic |
| AATATGGATGGTGTACTCAA+AGG | 0.598801 | 4.4:+20360434 | MS.gene35071:CDS |
| AAGATCAGGATCATCCGTAA+AGG | 0.598968 | 4.4:-20362252 | None:intergenic |
| TGTGTTTAAGTTCCTGCCGT+AGG | 0.599390 | 4.4:-20363395 | None:intergenic |
| ATATATGCACAACAAAGTTG+AGG | 0.599454 | 4.4:+20360472 | MS.gene35071:CDS |
| ATGCTCCTATGACTGCTACT+GGG | 0.599526 | 4.4:+20358514 | MS.gene35071:CDS |
| GCAAGGCATGTCCTAAGCAA+TGG | 0.600325 | 4.4:+20360943 | MS.gene35071:CDS |
| GATCTGAAAAGAATAAGCAC+AGG | 0.602066 | 4.4:+20359669 | MS.gene35071:CDS |
| GGTCCACAAACAAGTTTAGT+GGG | 0.604387 | 4.4:+20360971 | MS.gene35071:CDS |
| TTGGTGAAGATTCTTATCCC+GGG | 0.604750 | 4.4:+20356694 | MS.gene35071:CDS |
| TTTGAATTCAAACTGGCGAA+CGG | 0.610499 | 4.4:-20360898 | None:intergenic |
| AACTGAATGGTCAATATGGA+TGG | 0.612659 | 4.4:+20360422 | MS.gene35071:CDS |
| AGCAATTATTTAGCATCTGT+AGG | 0.614495 | 4.4:-20363303 | None:intergenic |
| ACAGAAGTTCATTAAATACA+AGG | 0.617853 | 4.4:+20360520 | MS.gene35071:CDS |
| GCGAGGCATATCACAAATGA+GGG | 0.621981 | 4.4:+20360708 | MS.gene35071:CDS |
| TAATCCCAGAAGAGCTTTAG+GGG | 0.624736 | 4.4:-20358740 | None:intergenic |
| CCAAATACAGGAGAAGACGC+TGG | 0.628853 | 4.4:+20362682 | MS.gene35071:intron |
| AGATTATGTTGGGTCAAACA+AGG | 0.639267 | 4.4:+20359409 | MS.gene35071:CDS |
| TTGTTGTGCATATATTGATG+AGG | 0.643079 | 4.4:-20360464 | None:intergenic |
| CGTGCAGAACTTCATAGGCG+AGG | 0.643599 | 4.4:+20360691 | MS.gene35071:CDS |
| CATTCCAGATTAGATATGCA+AGG | 0.646025 | 4.4:+20358170 | MS.gene35071:CDS |
| TGGACCCGATATCGACACAT+AGG | 0.653112 | 4.4:-20362135 | None:intergenic |
| AAAGGAAGTTACCTGAGGCG+AGG | 0.656494 | 4.4:-20362732 | None:intergenic |
| TTTCTGTGGAGAATGATGCA+AGG | 0.657311 | 4.4:+20360926 | MS.gene35071:CDS |
| TAATATCAATTATCTAACCG+AGG | 0.658017 | 4.4:+20359943 | MS.gene35071:CDS |
| ATCCCAGAAGAGCTTTAGGG+GGG | 0.659435 | 4.4:-20358738 | None:intergenic |
| AGTGACTGTAGGGATTCAGA+AGG | 0.671188 | 4.4:+20359374 | MS.gene35071:CDS |
| ATATGCACAACAAAGTTGAG+GGG | 0.678794 | 4.4:+20360474 | MS.gene35071:CDS |
| CGCAGCGCATGATTACGCGA+TGG | 0.679459 | 4.4:-20363351 | None:intergenic |
| AATCCCAGAAGAGCTTTAGG+GGG | 0.680337 | 4.4:-20358739 | None:intergenic |
| CTGTTGATCGGAGAACTGAA+TGG | 0.680511 | 4.4:+20360409 | MS.gene35071:CDS |
| CTGTACATATAACCCAAGTG+TGG | 0.683359 | 4.4:-20362155 | None:intergenic |
| GCATATCTAATCTGGAATGG+CGG | 0.692647 | 4.4:-20358166 | None:intergenic |
| GAAGTTCATTAAATACAAGG+AGG | 0.717680 | 4.4:+20360523 | MS.gene35071:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20356515 | 20363507 | 20356515 | ID=MS.gene35071 |
| chr4.4 | mRNA | 20356515 | 20363507 | 20356515 | ID=MS.gene35071.t1;Parent=MS.gene35071 |
| chr4.4 | exon | 20356515 | 20356544 | 20356515 | ID=MS.gene35071.t1.exon1;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20356515 | 20356544 | 20356515 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20356659 | 20356744 | 20356659 | ID=MS.gene35071.t1.exon2;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20356659 | 20356744 | 20356659 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20358095 | 20358249 | 20358095 | ID=MS.gene35071.t1.exon3;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20358095 | 20358249 | 20358095 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20358474 | 20358535 | 20358474 | ID=MS.gene35071.t1.exon4;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20358474 | 20358535 | 20358474 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20358681 | 20358783 | 20358681 | ID=MS.gene35071.t1.exon5;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20358681 | 20358783 | 20358681 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20359362 | 20359430 | 20359362 | ID=MS.gene35071.t1.exon6;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20359362 | 20359430 | 20359362 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20359621 | 20359826 | 20359621 | ID=MS.gene35071.t1.exon7;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20359621 | 20359826 | 20359621 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20359931 | 20360068 | 20359931 | ID=MS.gene35071.t1.exon8;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20359931 | 20360068 | 20359931 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20360365 | 20360557 | 20360365 | ID=MS.gene35071.t1.exon9;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20360365 | 20360557 | 20360365 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20360670 | 20360729 | 20360670 | ID=MS.gene35071.t1.exon10;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20360670 | 20360729 | 20360670 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20360811 | 20361050 | 20360811 | ID=MS.gene35071.t1.exon11;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20360811 | 20361050 | 20360811 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20361849 | 20361976 | 20361849 | ID=MS.gene35071.t1.exon12;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20361849 | 20361976 | 20361849 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20362103 | 20362304 | 20362103 | ID=MS.gene35071.t1.exon13;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20362103 | 20362304 | 20362103 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20362692 | 20362742 | 20362692 | ID=MS.gene35071.t1.exon14;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20362692 | 20362742 | 20362692 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| chr4.4 | exon | 20363220 | 20363507 | 20363220 | ID=MS.gene35071.t1.exon15;Parent=MS.gene35071.t1 |
| chr4.4 | CDS | 20363220 | 20363507 | 20363220 | ID=cds.MS.gene35071.t1;Parent=MS.gene35071.t1 |
| Gene Sequence |
| Protein sequence |
