Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36417.t1 | XP_013457265.1 | 97.4 | 624 | 12 | 1 | 1 | 620 | 1 | 624 | 0.00E+00 | 1198.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36417.t1 | Q9SL48 | 77.6 | 616 | 133 | 3 | 1 | 612 | 1 | 615 | 2.1e-279 | 962.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36417.t1 | G7ZYG6 | 97.4 | 624 | 12 | 1 | 1 | 620 | 1 | 624 | 0.0e+00 | 1198.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051003 | MS.gene36417 | 0.801526 | 8.64E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene36417 | 0.815246 | 1.02E-51 | -1.69E-46 |
| MS.gene051381 | MS.gene36417 | 0.801778 | 7.67E-49 | -1.69E-46 |
| MS.gene051450 | MS.gene36417 | 0.818017 | 2.44E-52 | -1.69E-46 |
| MS.gene051642 | MS.gene36417 | 0.814694 | 1.35E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene36417 | 0.818224 | 2.19E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene36417 | 0.839504 | 1.52E-57 | -1.69E-46 |
| MS.gene052609 | MS.gene36417 | 0.800158 | 1.64E-48 | -1.69E-46 |
| MS.gene053143 | MS.gene36417 | 0.839943 | 1.17E-57 | -1.69E-46 |
| MS.gene055975 | MS.gene36417 | 0.817689 | 2.89E-52 | -1.69E-46 |
| MS.gene059007 | MS.gene36417 | 0.81141 | 7.10E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene36417 | 0.802578 | 5.25E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene36417 | 0.817384 | 3.39E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072972 | MS.gene36417 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36417.t1 | MTR_4g094405 | 98.558 | 624 | 5 | 1 | 1 | 620 | 1 | 624 | 0.0 | 1273 |
| MS.gene36417.t1 | MTR_3g090170 | 23.792 | 559 | 350 | 21 | 35 | 572 | 22 | 525 | 4.93e-22 | 100 |
| MS.gene36417.t1 | MTR_4g023610 | 23.503 | 451 | 298 | 15 | 13 | 440 | 23 | 449 | 5.45e-22 | 100 |
| MS.gene36417.t1 | MTR_3g090170 | 25.059 | 423 | 266 | 14 | 35 | 439 | 22 | 411 | 2.00e-19 | 91.7 |
| MS.gene36417.t1 | MTR_4g102120 | 22.901 | 393 | 267 | 11 | 24 | 397 | 35 | 410 | 3.86e-18 | 89.0 |
| MS.gene36417.t1 | MTR_8g052140 | 92.308 | 39 | 3 | 0 | 45 | 83 | 35 | 73 | 1.33e-17 | 78.2 |
| MS.gene36417.t1 | MTR_5g011790 | 21.429 | 434 | 303 | 14 | 13 | 426 | 23 | 438 | 9.88e-16 | 80.9 |
| MS.gene36417.t1 | MTR_5g011790 | 21.429 | 434 | 303 | 14 | 13 | 426 | 23 | 438 | 1.55e-15 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36417.t1 | AT2G17980 | 77.597 | 616 | 133 | 3 | 1 | 612 | 1 | 615 | 0.0 | 1008 |
| MS.gene36417.t1 | AT4G31740 | 64.948 | 194 | 44 | 2 | 418 | 611 | 1 | 170 | 3.30e-76 | 240 |
| MS.gene36417.t1 | AT4G36100 | 65.185 | 135 | 40 | 3 | 383 | 516 | 107 | 235 | 1.05e-44 | 159 |
| MS.gene36417.t1 | AT4G12120 | 24.318 | 403 | 258 | 14 | 33 | 411 | 42 | 421 | 5.09e-21 | 98.2 |
| MS.gene36417.t1 | AT1G12360 | 21.483 | 391 | 274 | 9 | 24 | 397 | 33 | 407 | 1.35e-19 | 93.6 |
| MS.gene36417.t1 | AT1G02010 | 22.348 | 443 | 305 | 15 | 13 | 440 | 24 | 442 | 1.99e-19 | 92.8 |
| MS.gene36417.t1 | AT1G02010 | 22.297 | 444 | 306 | 15 | 13 | 441 | 24 | 443 | 2.17e-19 | 92.8 |
| MS.gene36417.t1 | AT1G02010 | 22.348 | 443 | 305 | 15 | 13 | 440 | 24 | 442 | 2.28e-19 | 92.8 |
| MS.gene36417.t1 | AT1G77140 | 21.931 | 611 | 394 | 22 | 11 | 602 | 9 | 555 | 2.67e-19 | 92.4 |
| MS.gene36417.t1 | AT1G02010 | 22.274 | 431 | 296 | 15 | 25 | 440 | 4 | 410 | 6.89e-19 | 91.3 |
| MS.gene36417.t1 | AT1G02010 | 21.519 | 474 | 301 | 17 | 13 | 440 | 24 | 472 | 9.72e-16 | 81.3 |
Find 156 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACAATTGCTTCCTTAAA+TGG | 0.132005 | 4.1:-19188765 | None:intergenic |
| GTTGTTGTTGTTCCTGTTAT+TGG | 0.224127 | 4.1:-19187175 | None:intergenic |
| CCATTTAAAAGGTCCATTTA+AGG | 0.245268 | 4.1:+19188752 | MS.gene36417:CDS |
| GAGAATGACATGATGGTTAG+AGG | 0.262303 | 4.1:+19188288 | MS.gene36417:CDS |
| TGGATAGTGCTGATTCGTTT+TGG | 0.273156 | 4.1:+19187980 | MS.gene36417:CDS |
| TTGGTGTTGTTCCGGTTATT+AGG | 0.300804 | 4.1:+19187683 | MS.gene36417:CDS |
| CCTCCCAAGCATATTATATA+TGG | 0.307162 | 4.1:+19188852 | MS.gene36417:CDS |
| ATGCTTGAAGATCTTGCTTC+GGG | 0.309638 | 4.1:+19187460 | MS.gene36417:CDS |
| GCAAGTGGCAACCATTTAAA+AGG | 0.326987 | 4.1:+19188741 | MS.gene36417:CDS |
| TTGCGATTCAGCATGACTTT+AGG | 0.340194 | 4.1:+19187869 | MS.gene36417:CDS |
| GTAGAGCAGCTTACGTTGTT+GGG | 0.345957 | 4.1:+19188906 | MS.gene36417:CDS |
| ATTGTTGAGAGGATTGTTAA+TGG | 0.346750 | 4.1:+19187637 | MS.gene36417:CDS |
| CGCTGAACGTTGGATTGAAT+TGG | 0.351150 | 4.1:-19187364 | None:intergenic |
| TTGGGGAAGAAGATGGGTTT+GGG | 0.355383 | 4.1:+19188924 | MS.gene36417:CDS |
| TACATATCTGTCTCAGGATT+TGG | 0.363551 | 4.1:-19188678 | None:intergenic |
| AATAATTTGTTTACTGAAGG+TGG | 0.367485 | 4.1:+19187781 | MS.gene36417:CDS |
| GATCCCCGTGCTCCTAAGTC+TGG | 0.372753 | 4.1:+19188711 | MS.gene36417:CDS |
| GATGCTTGAAGATCTTGCTT+CGG | 0.373839 | 4.1:+19187459 | MS.gene36417:CDS |
| TTCCTGTTATTGGTTGGTTT+AGG | 0.389171 | 4.1:-19187165 | None:intergenic |
| GGCGACGCTTGGTGTTGTTC+CGG | 0.390442 | 4.1:+19187675 | MS.gene36417:CDS |
| AACCTAAACCAACCAATAAC+AGG | 0.402200 | 4.1:+19187163 | MS.gene36417:CDS |
| TAGGTGTCCGCGTGGTGGGC+CGG | 0.402954 | 4.1:+19187702 | MS.gene36417:CDS |
| GACAGAATTTGTCGTAGATA+AGG | 0.409373 | 4.1:-19187219 | None:intergenic |
| GTTGGGGAAGAAGATGGGTT+TGG | 0.412638 | 4.1:+19188923 | MS.gene36417:CDS |
| AACATTGCTACTGTGTTGTT+GGG | 0.414573 | 4.1:+19188225 | MS.gene36417:CDS |
| GACTGGGCCGAGAAGCTCTA+TGG | 0.415523 | 4.1:+19188555 | MS.gene36417:CDS |
| TAACATTGCTACTGTGTTGT+TGG | 0.421174 | 4.1:+19188224 | MS.gene36417:CDS |
| TGCTTCGGGGACCATAGCTT+CGG | 0.422216 | 4.1:+19187474 | MS.gene36417:CDS |
| TTGTTGAGAGGATTGTTAAT+GGG | 0.426907 | 4.1:+19187638 | MS.gene36417:CDS |
| CGTGCTCCTAAGTCTGGTTC+AGG | 0.428583 | 4.1:+19188717 | MS.gene36417:CDS |
| GCGTGGTGGGCCGGCTGAGA+TGG | 0.429236 | 4.1:+19187711 | MS.gene36417:CDS |
| TTGAATAGGTTGAGTGTTCA+AGG | 0.432954 | 4.1:+19187928 | MS.gene36417:CDS |
| CGTTGGTTCATGATGTGCTT+GGG | 0.434927 | 4.1:+19187899 | MS.gene36417:CDS |
| AAACCGAAGCTTATCCATCT+TGG | 0.435098 | 4.1:-19188358 | None:intergenic |
| ATTTGGTCTCCCTTCAATCA+AGG | 0.437182 | 4.1:-19188661 | None:intergenic |
| CCGCGTTGGATCAAAGGATC+AGG | 0.441656 | 4.1:+19187740 | MS.gene36417:CDS |
| CTGTTGAAGCCTTGATTGAA+GGG | 0.444683 | 4.1:+19188652 | MS.gene36417:CDS |
| TGACTGTCCATAGAGCTTCT+CGG | 0.445565 | 4.1:-19188562 | None:intergenic |
| TTTGATGGGACGGATTTGAT+TGG | 0.447772 | 4.1:+19188123 | MS.gene36417:CDS |
| TGTAGAGCAGCTTACGTTGT+TGG | 0.448636 | 4.1:+19188905 | MS.gene36417:CDS |
| ACTGTTGAAGCCTTGATTGA+AGG | 0.449353 | 4.1:+19188651 | MS.gene36417:CDS |
| TTGAGTGTTCAAGGGGAGAA+AGG | 0.451443 | 4.1:+19187937 | MS.gene36417:CDS |
| TACGTTGTTGGGGAAGAAGA+TGG | 0.452960 | 4.1:+19188917 | MS.gene36417:CDS |
| AGATCTTTGACATGAATTAA+CGG | 0.456244 | 4.1:-19187256 | None:intergenic |
| TGTTAGTTCGTTTCAGAGGC+CGG | 0.458725 | 4.1:+19187810 | MS.gene36417:CDS |
| TGCTTGGGTTGAAGTTGAAT+AGG | 0.461236 | 4.1:+19187914 | MS.gene36417:CDS |
| AAGAATAATTTGTTTACTGA+AGG | 0.466422 | 4.1:+19187778 | MS.gene36417:CDS |
| GCAGAAGTAATATTGTTGAC+TGG | 0.470359 | 4.1:+19188538 | MS.gene36417:CDS |
| ATAATTTGTTTACTGAAGGT+GGG | 0.472080 | 4.1:+19187782 | MS.gene36417:CDS |
| AATCTTCGTCAGAAACAAAC+AGG | 0.472595 | 4.1:+19187045 | MS.gene36417:CDS |
| TCAATCTCCACCGCAACCTC+AGG | 0.475104 | 4.1:-19188027 | None:intergenic |
| CCACGCGGACACCTAATAAC+CGG | 0.475351 | 4.1:-19187694 | None:intergenic |
| AATCACGGTGCGGAGTTTGA+TGG | 0.479706 | 4.1:+19188108 | MS.gene36417:CDS |
| CGTTCCATATATAATATGCT+TGG | 0.482424 | 4.1:-19188856 | None:intergenic |
| CAACAATCTCCTCAATTTCA+CGG | 0.487353 | 4.1:-19187621 | None:intergenic |
| TTCAGCATGACTTTAGGTAT+AGG | 0.487647 | 4.1:+19187875 | MS.gene36417:CDS |
| TAAGTCTCTGAATGTTTCGT+TGG | 0.487831 | 4.1:+19188497 | MS.gene36417:CDS |
| TTATTAGGTGTCCGCGTGGT+GGG | 0.489264 | 4.1:+19187698 | MS.gene36417:CDS |
| AACTTCTCGGTGTGCTGAGA+GGG | 0.491058 | 4.1:+19188328 | MS.gene36417:CDS |
| GAACCAAGATGGATAAGCTT+CGG | 0.493462 | 4.1:+19188355 | MS.gene36417:CDS |
| CCGTTGGTTCATGATGTGCT+TGG | 0.493871 | 4.1:+19187898 | MS.gene36417:CDS |
| AAGTCATGCTGAATCGCAAC+CGG | 0.494196 | 4.1:-19187865 | None:intergenic |
| GTTCCATATATAATATGCTT+GGG | 0.496796 | 4.1:-19188855 | None:intergenic |
| AATCTTAATGATCCGTCTGC+TGG | 0.498721 | 4.1:+19187595 | MS.gene36417:CDS |
| TGCTTCCTCTCAGTCAGCTC+AGG | 0.499034 | 4.1:-19188183 | None:intergenic |
| AAGATGGGTTTGGGTAATGC+TGG | 0.500440 | 4.1:+19188933 | MS.gene36417:CDS |
| ACGGCGGGAACATCGTGAAC+GGG | 0.500575 | 4.1:-19187328 | None:intergenic |
| TGAAGTGGAGGCTGTGGAAA+CGG | 0.501310 | 4.1:+19188422 | MS.gene36417:CDS |
| GTTGGAGTTTCCTGAGGTTG+CGG | 0.502834 | 4.1:+19188017 | MS.gene36417:CDS |
| GCGAGGTACATATCTGTCTC+AGG | 0.503900 | 4.1:-19188684 | None:intergenic |
| TGGCTACCGCGTTGGATCAA+AGG | 0.505080 | 4.1:+19187734 | MS.gene36417:CDS |
| ATCACGGTGCGGAGTTTGAT+GGG | 0.508088 | 4.1:+19188109 | MS.gene36417:CDS |
| CTCGGTGTGCTGAGAGGGAA+GGG | 0.508637 | 4.1:+19188333 | MS.gene36417:CDS |
| ATTGAAAGGAGTGAACTTCT+CGG | 0.509013 | 4.1:+19188315 | MS.gene36417:CDS |
| AATTGGTTGAACGAAATAAA+CGG | 0.509297 | 4.1:-19187347 | None:intergenic |
| TGCGATGATTCGCTGAACGT+TGG | 0.509719 | 4.1:-19187374 | None:intergenic |
| TCCACAGCCTCCACTTCAGT+CGG | 0.509720 | 4.1:-19188417 | None:intergenic |
| CTTGCTCCTGAACCAGACTT+AGG | 0.509749 | 4.1:-19188723 | None:intergenic |
| CAGAAGTAATATTGTTGACT+GGG | 0.512458 | 4.1:+19188539 | MS.gene36417:CDS |
| TCTTGAGTTTGTTACTCTTG+AGG | 0.518569 | 4.1:+19187534 | MS.gene36417:CDS |
| GTGTTCAAGGGGAGAAAGGT+GGG | 0.520944 | 4.1:+19187941 | MS.gene36417:CDS |
| TCCGACTGAAGTGGAGGCTG+TGG | 0.522299 | 4.1:+19188416 | MS.gene36417:CDS |
| TTGGGTTGCAAATGGTGGGT+TGG | 0.524353 | 4.1:+19187999 | MS.gene36417:CDS |
| AGTGTTCAAGGGGAGAAAGG+TGG | 0.524971 | 4.1:+19187940 | MS.gene36417:CDS |
| TTGTTGTTCCTGTTATTGGT+TGG | 0.526111 | 4.1:-19187171 | None:intergenic |
| TGATAGGAATTTCGAGCTGC+CGG | 0.529179 | 4.1:+19187846 | MS.gene36417:CDS |
| ACGTTGTTGGGGAAGAAGAT+GGG | 0.529725 | 4.1:+19188918 | MS.gene36417:CDS |
| CATCATGTATCTGATTTCAT+CGG | 0.529783 | 4.1:+19188383 | MS.gene36417:CDS |
| TGAATAGGTTGAGTGTTCAA+GGG | 0.531169 | 4.1:+19187929 | MS.gene36417:CDS |
| CACATCTGAACTACTGAGGT+GGG | 0.531717 | 4.1:-19188962 | None:intergenic |
| GAGAGGGAAGGGAACCAAGA+TGG | 0.533226 | 4.1:+19188344 | MS.gene36417:CDS |
| TGGTTAGAGGGAGTATTGAA+AGG | 0.535987 | 4.1:+19188301 | MS.gene36417:CDS |
| TTCGATTCAGCGAATTTCGA+AGG | 0.537025 | 4.1:+19187498 | MS.gene36417:CDS |
| TAGTGACAGACAGCTAGCTT+TGG | 0.538193 | 4.1:+19188623 | MS.gene36417:CDS |
| TGACTTTAGGTATAGGCCGT+TGG | 0.538298 | 4.1:+19187882 | MS.gene36417:CDS |
| TGGGATGAGATCTTATGAGT+TGG | 0.539391 | 4.1:+19187960 | MS.gene36417:CDS |
| CTGACGAAGATTGAGAGACA+TGG | 0.539905 | 4.1:-19187034 | None:intergenic |
| GCTTGATTCATATGCTAAGA+AGG | 0.541789 | 4.1:+19188266 | MS.gene36417:CDS |
| AGAATGACATGATGGTTAGA+GGG | 0.546127 | 4.1:+19188289 | MS.gene36417:CDS |
| CGATGAAATCAGATACATGA+TGG | 0.547327 | 4.1:-19188382 | None:intergenic |
| TGTGTTGTTGGGTGAGATCA+AGG | 0.549244 | 4.1:+19188236 | MS.gene36417:CDS |
| TGAACCAGACTTAGGAGCAC+GGG | 0.551638 | 4.1:-19188715 | None:intergenic |
| CTGAATCGAATCCGAAGCTA+TGG | 0.553466 | 4.1:-19187485 | None:intergenic |
| CGGTGCGGAGTTTGATGGGA+CGG | 0.555506 | 4.1:+19188113 | MS.gene36417:CDS |
| GTTATTAGGTGTCCGCGTGG+TGG | 0.559238 | 4.1:+19187697 | MS.gene36417:CDS |
| AACTATTAATCCGACTGAAG+TGG | 0.560642 | 4.1:+19188407 | MS.gene36417:CDS |
| TCTCGGTGTGCTGAGAGGGA+AGG | 0.564630 | 4.1:+19188332 | MS.gene36417:CDS |
| GCGGTAGCCACCATCTCAGC+CGG | 0.573670 | 4.1:-19187721 | None:intergenic |
| GATGAGGTCAATAAGAGGAC+TGG | 0.574212 | 4.1:+19188081 | MS.gene36417:CDS |
| GAATAGGTTGAGTGTTCAAG+GGG | 0.576422 | 4.1:+19187930 | MS.gene36417:CDS |
| TGCTGGTGACCGTGAAATTG+AGG | 0.576895 | 4.1:+19187612 | MS.gene36417:CDS |
| AACGGCGGGAACATCGTGAA+CGG | 0.577620 | 4.1:-19187329 | None:intergenic |
| AAGAGGACTGGAGGGAATCA+CGG | 0.579431 | 4.1:+19188093 | MS.gene36417:CDS |
| TGGTGGGCCGGCTGAGATGG+TGG | 0.580027 | 4.1:+19187714 | MS.gene36417:CDS |
| ATGTTGATGAGGTCAATAAG+AGG | 0.580113 | 4.1:+19188076 | MS.gene36417:CDS |
| CGCGTTGGATCAAAGGATCA+GGG | 0.580476 | 4.1:+19187741 | MS.gene36417:CDS |
| TGAGATGGTGGCTACCGCGT+TGG | 0.586343 | 4.1:+19187726 | MS.gene36417:CDS |
| TCACATCTGAACTACTGAGG+TGG | 0.588791 | 4.1:-19188963 | None:intergenic |
| GAAGCAAGATCTTCAAGCAT+CGG | 0.589526 | 4.1:-19187457 | None:intergenic |
| TCGATGTTGAGAAATTGAGA+TGG | 0.590144 | 4.1:-19187426 | None:intergenic |
| GAGGTCAATAAGAGGACTGG+AGG | 0.591483 | 4.1:+19188084 | MS.gene36417:CDS |
| TAGAGCAGCTTACGTTGTTG+GGG | 0.594589 | 4.1:+19188907 | MS.gene36417:CDS |
| AGATCTTCAAGCATCGGACG+AGG | 0.598135 | 4.1:-19187451 | None:intergenic |
| TCAATAAGTGCAGTGACTGC+TGG | 0.598945 | 4.1:+19188582 | MS.gene36417:CDS |
| GGTTGAACGAAATAAACGGC+GGG | 0.599421 | 4.1:-19187343 | None:intergenic |
| TAAGAAGGAGAATGACATGA+TGG | 0.614444 | 4.1:+19188281 | MS.gene36417:CDS |
| TGGTGGGTTGGAGTTTCCTG+AGG | 0.614604 | 4.1:+19188011 | MS.gene36417:CDS |
| GGAGTTTCCTGAGGTTGCGG+TGG | 0.617381 | 4.1:+19188020 | MS.gene36417:CDS |
| TGCTTGAAGATCTTGCTTCG+GGG | 0.618864 | 4.1:+19187461 | MS.gene36417:CDS |
| AAATTGAGGAGATTGTTGAG+AGG | 0.621276 | 4.1:+19187626 | MS.gene36417:CDS |
| AAGTCTGGTTCAGGAGCAAG+TGG | 0.621847 | 4.1:+19188726 | MS.gene36417:CDS |
| TATTAATCCGACTGAAGTGG+AGG | 0.623131 | 4.1:+19188410 | MS.gene36417:CDS |
| GTATAAGAATGATGTTGATG+AGG | 0.625258 | 4.1:+19188065 | MS.gene36417:CDS |
| CCATATATAATATGCTTGGG+AGG | 0.626100 | 4.1:-19188852 | None:intergenic |
| GTTTACGATCTTTGTCGATG+AGG | 0.627835 | 4.1:-19187306 | None:intergenic |
| GTCAAAGATCTTCGTAAACA+CGG | 0.631895 | 4.1:+19187268 | MS.gene36417:CDS |
| CTGAACCAGACTTAGGAGCA+CGG | 0.640321 | 4.1:-19188716 | None:intergenic |
| ATTTCACGGTCACCAGCAGA+CGG | 0.640573 | 4.1:-19187607 | None:intergenic |
| AGGTCAATAAGAGGACTGGA+GGG | 0.644829 | 4.1:+19188085 | MS.gene36417:CDS |
| CCAAGCACATCATGAACCAA+CGG | 0.646610 | 4.1:-19187898 | None:intergenic |
| CACGAAGCATTTGATGAATG+CGG | 0.648032 | 4.1:+19188149 | MS.gene36417:CDS |
| ACATCTGAACTACTGAGGTG+GGG | 0.648073 | 4.1:-19188961 | None:intergenic |
| GAACTTCTCGGTGTGCTGAG+AGG | 0.648753 | 4.1:+19188327 | MS.gene36417:CDS |
| TGATTGATAAAGCGATCGTG+AGG | 0.664290 | 4.1:-19187401 | None:intergenic |
| ACAGACAGCTAGCTTTGGCG+AGG | 0.674437 | 4.1:+19188628 | MS.gene36417:CDS |
| CGTTACCTGAGCTGACTGAG+AGG | 0.681656 | 4.1:+19188178 | MS.gene36417:CDS |
| CATTCACATCTGAACTACTG+AGG | 0.684802 | 4.1:-19188966 | None:intergenic |
| ATCTCAGCCGGCCCACCACG+CGG | 0.700567 | 4.1:-19187709 | None:intergenic |
| GACTGGAGGGAATCACGGTG+CGG | 0.708144 | 4.1:+19188098 | MS.gene36417:CDS |
| GAGCACGGGGATCAAAAGCG+AGG | 0.710613 | 4.1:-19188701 | None:intergenic |
| AACGGCGCTGAGAGAGTGTG+AGG | 0.717344 | 4.1:+19188440 | MS.gene36417:CDS |
| CCTGATCCTTTGATCCAACG+CGG | 0.725049 | 4.1:-19187740 | None:intergenic |
| CCGGTTATTAGGTGTCCGCG+TGG | 0.725388 | 4.1:+19187694 | MS.gene36417:CDS |
| GAACCAGACTTAGGAGCACG+GGG | 0.729204 | 4.1:-19188714 | None:intergenic |
| TGTTGGGTGAGATCAAGGAG+AGG | 0.746514 | 4.1:+19188241 | MS.gene36417:CDS |
| TGGTTGAACGAAATAAACGG+CGG | 0.753853 | 4.1:-19187344 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAATAATTTGTTTACTGA+AGG | + | chr4.1:19187778-19187797 | MS.gene36417:CDS | 20.0% |
| ! | AAAACAATTGCTTCCTTAAA+TGG | - | chr4.1:19188768-19188787 | None:intergenic | 25.0% |
| ! | AATGATGAAGAGATTGAAAA+TGG | - | chr4.1:19187096-19187115 | None:intergenic | 25.0% |
| ! | AATTGGTTGAACGAAATAAA+CGG | - | chr4.1:19187350-19187369 | None:intergenic | 25.0% |
| ! | AGATCTTTGACATGAATTAA+CGG | - | chr4.1:19187259-19187278 | None:intergenic | 25.0% |
| ! | GTTCCATATATAATATGCTT+GGG | - | chr4.1:19188858-19188877 | None:intergenic | 25.0% |
| !! | GCATTCTGAAAATTTGAAAA+TGG | - | chr4.1:19187128-19187147 | None:intergenic | 25.0% |
| !!! | AATAATTTGTTTACTGAAGG+TGG | + | chr4.1:19187781-19187800 | MS.gene36417:CDS | 25.0% |
| !!! | ATAATTTGTTTACTGAAGGT+GGG | + | chr4.1:19187782-19187801 | MS.gene36417:CDS | 25.0% |
| AGAGATTGAAAATGGAATTG+AGG | - | chr4.1:19187088-19187107 | None:intergenic | 30.0% | |
| ATTGTTGAGAGGATTGTTAA+TGG | + | chr4.1:19187637-19187656 | MS.gene36417:CDS | 30.0% | |
| CATCATGTATCTGATTTCAT+CGG | + | chr4.1:19188383-19188402 | MS.gene36417:CDS | 30.0% | |
| CCATTTAAAAGGTCCATTTA+AGG | + | chr4.1:19188752-19188771 | MS.gene36417:CDS | 30.0% | |
| CGTTCCATATATAATATGCT+TGG | - | chr4.1:19188859-19188878 | None:intergenic | 30.0% | |
| CTATCAAAAACACACAAAAC+CGG | - | chr4.1:19187832-19187851 | None:intergenic | 30.0% | |
| GAGATTGAAAATGGAATTGA+GGG | - | chr4.1:19187087-19187106 | None:intergenic | 30.0% | |
| GTATAAGAATGATGTTGATG+AGG | + | chr4.1:19188065-19188084 | MS.gene36417:CDS | 30.0% | |
| TTGTTGAGAGGATTGTTAAT+GGG | + | chr4.1:19187638-19187657 | MS.gene36417:CDS | 30.0% | |
| ! | ATTTTGTTAGTTCGTTTCAG+AGG | + | chr4.1:19187806-19187825 | MS.gene36417:CDS | 30.0% |
| ! | CAGAAGTAATATTGTTGACT+GGG | + | chr4.1:19188539-19188558 | MS.gene36417:CDS | 30.0% |
| ! | CCTTAAATGGACCTTTTAAA+TGG | - | chr4.1:19188755-19188774 | None:intergenic | 30.0% |
| ! | GAAGCAATTGTTTTCATGAT+TGG | + | chr4.1:19188774-19188793 | MS.gene36417:CDS | 30.0% |
| !!! | TAATGGGTTGTTTTGTGTTT+TGG | + | chr4.1:19187654-19187673 | MS.gene36417:CDS | 30.0% |
| !!! | TGAGGATAATTTGTTTTCGT+TGG | + | chr4.1:19187552-19187571 | MS.gene36417:CDS | 30.0% |
| AAATTGAGGAGATTGTTGAG+AGG | + | chr4.1:19187626-19187645 | MS.gene36417:CDS | 35.0% | |
| AACCTAAACCAACCAATAAC+AGG | + | chr4.1:19187163-19187182 | MS.gene36417:CDS | 35.0% | |
| AACTATTAATCCGACTGAAG+TGG | + | chr4.1:19188407-19188426 | MS.gene36417:CDS | 35.0% | |
| AATCTTCGTCAGAAACAAAC+AGG | + | chr4.1:19187045-19187064 | MS.gene36417:CDS | 35.0% | |
| AGAATGACATGATGGTTAGA+GGG | + | chr4.1:19188289-19188308 | MS.gene36417:CDS | 35.0% | |
| ATTGAAAGGAGTGAACTTCT+CGG | + | chr4.1:19188315-19188334 | MS.gene36417:CDS | 35.0% | |
| CAACAATCTCCTCAATTTCA+CGG | - | chr4.1:19187624-19187643 | None:intergenic | 35.0% | |
| CCATATATAATATGCTTGGG+AGG | - | chr4.1:19188855-19188874 | None:intergenic | 35.0% | |
| CCTCCCAAGCATATTATATA+TGG | + | chr4.1:19188852-19188871 | MS.gene36417:CDS | 35.0% | |
| CGATGAAATCAGATACATGA+TGG | - | chr4.1:19188385-19188404 | None:intergenic | 35.0% | |
| GACAGAATTTGTCGTAGATA+AGG | - | chr4.1:19187222-19187241 | None:intergenic | 35.0% | |
| GCAGAAGTAATATTGTTGAC+TGG | + | chr4.1:19188538-19188557 | MS.gene36417:CDS | 35.0% | |
| GCTTGATTCATATGCTAAGA+AGG | + | chr4.1:19188266-19188285 | MS.gene36417:CDS | 35.0% | |
| GTCAAAGATCTTCGTAAACA+CGG | + | chr4.1:19187268-19187287 | MS.gene36417:CDS | 35.0% | |
| TAACATTGCTACTGTGTTGT+TGG | + | chr4.1:19188224-19188243 | MS.gene36417:CDS | 35.0% | |
| TAAGAAGGAGAATGACATGA+TGG | + | chr4.1:19188281-19188300 | MS.gene36417:CDS | 35.0% | |
| TAAGTCTCTGAATGTTTCGT+TGG | + | chr4.1:19188497-19188516 | MS.gene36417:CDS | 35.0% | |
| TACATATCTGTCTCAGGATT+TGG | - | chr4.1:19188681-19188700 | None:intergenic | 35.0% | |
| TCGATGTTGAGAAATTGAGA+TGG | - | chr4.1:19187429-19187448 | None:intergenic | 35.0% | |
| TTCAGCATGACTTTAGGTAT+AGG | + | chr4.1:19187875-19187894 | MS.gene36417:CDS | 35.0% | |
| ! | AACATTGCTACTGTGTTGTT+GGG | + | chr4.1:19188225-19188244 | MS.gene36417:CDS | 35.0% |
| ! | ATGTTGATGAGGTCAATAAG+AGG | + | chr4.1:19188076-19188095 | MS.gene36417:CDS | 35.0% |
| ! | ATTGTTTTCATGATTGGTGG+TGG | + | chr4.1:19188780-19188799 | MS.gene36417:CDS | 35.0% |
| ! | GCAATTGTTTTCATGATTGG+TGG | + | chr4.1:19188777-19188796 | MS.gene36417:CDS | 35.0% |
| ! | GTTGTTGTTGTTCCTGTTAT+TGG | - | chr4.1:19187178-19187197 | None:intergenic | 35.0% |
| ! | TGAATAGGTTGAGTGTTCAA+GGG | + | chr4.1:19187929-19187948 | MS.gene36417:CDS | 35.0% |
| ! | TTGAATAGGTTGAGTGTTCA+AGG | + | chr4.1:19187928-19187947 | MS.gene36417:CDS | 35.0% |
| ! | TTGTTGTTCCTGTTATTGGT+TGG | - | chr4.1:19187174-19187193 | None:intergenic | 35.0% |
| !! | CGGTTTTGTGTGTTTTTGAT+AGG | + | chr4.1:19187830-19187849 | MS.gene36417:CDS | 35.0% |
| !! | TCTTGAGTTTGTTACTCTTG+AGG | + | chr4.1:19187534-19187553 | MS.gene36417:CDS | 35.0% |
| !! | TTCCTGTTATTGGTTGGTTT+AGG | - | chr4.1:19187168-19187187 | None:intergenic | 35.0% |
| AAACCGAAGCTTATCCATCT+TGG | - | chr4.1:19188361-19188380 | None:intergenic | 40.0% | |
| AATCTTAATGATCCGTCTGC+TGG | + | chr4.1:19187595-19187614 | MS.gene36417:CDS | 40.0% | |
| ACTGTTGAAGCCTTGATTGA+AGG | + | chr4.1:19188651-19188670 | MS.gene36417:CDS | 40.0% | |
| ATGCTTGAAGATCTTGCTTC+GGG | + | chr4.1:19187460-19187479 | MS.gene36417:CDS | 40.0% | |
| ATTTGGTCTCCCTTCAATCA+AGG | - | chr4.1:19188664-19188683 | None:intergenic | 40.0% | |
| CTGTTGAAGCCTTGATTGAA+GGG | + | chr4.1:19188652-19188671 | MS.gene36417:CDS | 40.0% | |
| GAACCAAGATGGATAAGCTT+CGG | + | chr4.1:19188355-19188374 | MS.gene36417:CDS | 40.0% | |
| GAAGCAAGATCTTCAAGCAT+CGG | - | chr4.1:19187460-19187479 | None:intergenic | 40.0% | |
| GAGAATGACATGATGGTTAG+AGG | + | chr4.1:19188288-19188307 | MS.gene36417:CDS | 40.0% | |
| GATGCTTGAAGATCTTGCTT+CGG | + | chr4.1:19187459-19187478 | MS.gene36417:CDS | 40.0% | |
| GCAAGTGGCAACCATTTAAA+AGG | + | chr4.1:19188741-19188760 | MS.gene36417:CDS | 40.0% | |
| GTTTACGATCTTTGTCGATG+AGG | - | chr4.1:19187309-19187328 | None:intergenic | 40.0% | |
| TATTAATCCGACTGAAGTGG+AGG | + | chr4.1:19188410-19188429 | MS.gene36417:CDS | 40.0% | |
| TGATTGATAAAGCGATCGTG+AGG | - | chr4.1:19187404-19187423 | None:intergenic | 40.0% | |
| TGGGATGAGATCTTATGAGT+TGG | + | chr4.1:19187960-19187979 | MS.gene36417:CDS | 40.0% | |
| TGGTTGAACGAAATAAACGG+CGG | - | chr4.1:19187347-19187366 | None:intergenic | 40.0% | |
| TTCGATTCAGCGAATTTCGA+AGG | + | chr4.1:19187498-19187517 | MS.gene36417:CDS | 40.0% | |
| TTGCGATTCAGCATGACTTT+AGG | + | chr4.1:19187869-19187888 | MS.gene36417:CDS | 40.0% | |
| ! | CACGAAGCATTTGATGAATG+CGG | + | chr4.1:19188149-19188168 | MS.gene36417:CDS | 40.0% |
| ! | GAATAGGTTGAGTGTTCAAG+GGG | + | chr4.1:19187930-19187949 | MS.gene36417:CDS | 40.0% |
| ! | TTTGATGGGACGGATTTGAT+TGG | + | chr4.1:19188123-19188142 | MS.gene36417:CDS | 40.0% |
| !! | GACAGAACTTTTGACTGGAA+TGG | + | chr4.1:19188878-19188897 | MS.gene36417:CDS | 40.0% |
| !! | TGCTTGGGTTGAAGTTGAAT+AGG | + | chr4.1:19187914-19187933 | MS.gene36417:CDS | 40.0% |
| !! | TGGTTAGAGGGAGTATTGAA+AGG | + | chr4.1:19188301-19188320 | MS.gene36417:CDS | 40.0% |
| !! | TTGGTGTTGTTCCGGTTATT+AGG | + | chr4.1:19187683-19187702 | MS.gene36417:CDS | 40.0% |
| !!! | GATTCGTTTTGGGTTGCAAA+TGG | + | chr4.1:19187991-19188010 | MS.gene36417:CDS | 40.0% |
| !!! | GGATAGTGCTGATTCGTTTT+GGG | + | chr4.1:19187981-19188000 | MS.gene36417:CDS | 40.0% |
| !!! | TGGATAGTGCTGATTCGTTT+TGG | + | chr4.1:19187980-19187999 | MS.gene36417:CDS | 40.0% |
| AAGTCATGCTGAATCGCAAC+CGG | - | chr4.1:19187868-19187887 | None:intergenic | 45.0% | |
| ACGTTGTTGGGGAAGAAGAT+GGG | + | chr4.1:19188918-19188937 | MS.gene36417:CDS | 45.0% | |
| AGGTCAATAAGAGGACTGGA+GGG | + | chr4.1:19188085-19188104 | MS.gene36417:CDS | 45.0% | |
| CCAAGCACATCATGAACCAA+CGG | - | chr4.1:19187901-19187920 | None:intergenic | 45.0% | |
| CGCTGAACGTTGGATTGAAT+TGG | - | chr4.1:19187367-19187386 | None:intergenic | 45.0% | |
| CTGAATCGAATCCGAAGCTA+TGG | - | chr4.1:19187488-19187507 | None:intergenic | 45.0% | |
| GATGAGGTCAATAAGAGGAC+TGG | + | chr4.1:19188081-19188100 | MS.gene36417:CDS | 45.0% | |
| GGTTGAACGAAATAAACGGC+GGG | - | chr4.1:19187346-19187365 | None:intergenic | 45.0% | |
| GTAGAGCAGCTTACGTTGTT+GGG | + | chr4.1:19188906-19188925 | MS.gene36417:CDS | 45.0% | |
| TACGTTGTTGGGGAAGAAGA+TGG | + | chr4.1:19188917-19188936 | MS.gene36417:CDS | 45.0% | |
| TAGAGCAGCTTACGTTGTTG+GGG | + | chr4.1:19188907-19188926 | MS.gene36417:CDS | 45.0% | |
| TCAATAAGTGCAGTGACTGC+TGG | + | chr4.1:19188582-19188601 | MS.gene36417:CDS | 45.0% | |
| TGACTGTCCATAGAGCTTCT+CGG | - | chr4.1:19188565-19188584 | None:intergenic | 45.0% | |
| TGACTTTAGGTATAGGCCGT+TGG | + | chr4.1:19187882-19187901 | MS.gene36417:CDS | 45.0% | |
| TGATAGGAATTTCGAGCTGC+CGG | + | chr4.1:19187846-19187865 | MS.gene36417:CDS | 45.0% | |
| TGCTTGAAGATCTTGCTTCG+GGG | + | chr4.1:19187461-19187480 | MS.gene36417:CDS | 45.0% | |
| TGTAGAGCAGCTTACGTTGT+TGG | + | chr4.1:19188905-19188924 | MS.gene36417:CDS | 45.0% | |
| TGTTAGTTCGTTTCAGAGGC+CGG | + | chr4.1:19187810-19187829 | MS.gene36417:CDS | 45.0% | |
| TTGAGTGTTCAAGGGGAGAA+AGG | + | chr4.1:19187937-19187956 | MS.gene36417:CDS | 45.0% | |
| ! | AAGATGGGTTTGGGTAATGC+TGG | + | chr4.1:19188933-19188952 | MS.gene36417:CDS | 45.0% |
| ! | GGAACGACAGAACTTTTGAC+TGG | + | chr4.1:19188873-19188892 | MS.gene36417:CDS | 45.0% |
| ! | TAGTGACAGACAGCTAGCTT+TGG | + | chr4.1:19188623-19188642 | MS.gene36417:CDS | 45.0% |
| ! | TGTGTTGTTGGGTGAGATCA+AGG | + | chr4.1:19188236-19188255 | MS.gene36417:CDS | 45.0% |
| ! | TTGGGGAAGAAGATGGGTTT+GGG | + | chr4.1:19188924-19188943 | MS.gene36417:CDS | 45.0% |
| !! | CGTTGGTTCATGATGTGCTT+GGG | + | chr4.1:19187899-19187918 | MS.gene36417:CDS | 45.0% |
| !!! | CGTTTTGGGTTGCAAATGGT+GGG | + | chr4.1:19187995-19188014 | MS.gene36417:CDS | 45.0% |
| !!! | TCGTTTTGGGTTGCAAATGG+TGG | + | chr4.1:19187994-19188013 | MS.gene36417:CDS | 45.0% |
| !!! | TTTTGTGTTTTGGCGACGCT+TGG | + | chr4.1:19187664-19187683 | MS.gene36417:CDS | 45.0% |
| AAGAGGACTGGAGGGAATCA+CGG | + | chr4.1:19188093-19188112 | MS.gene36417:CDS | 50.0% | |
| AATCACGGTGCGGAGTTTGA+TGG | + | chr4.1:19188108-19188127 | MS.gene36417:CDS | 50.0% | |
| AGTGTTCAAGGGGAGAAAGG+TGG | + | chr4.1:19187940-19187959 | MS.gene36417:CDS | 50.0% | |
| ATCACGGTGCGGAGTTTGAT+GGG | + | chr4.1:19188109-19188128 | MS.gene36417:CDS | 50.0% | |
| ATTTCACGGTCACCAGCAGA+CGG | - | chr4.1:19187610-19187629 | None:intergenic | 50.0% | |
| CCTGATCCTTTGATCCAACG+CGG | - | chr4.1:19187743-19187762 | None:intergenic | 50.0% | |
| CGCGTTGGATCAAAGGATCA+GGG | + | chr4.1:19187741-19187760 | MS.gene36417:CDS | 50.0% | |
| CTGAACCAGACTTAGGAGCA+CGG | - | chr4.1:19188719-19188738 | None:intergenic | 50.0% | |
| CTTGCTCCTGAACCAGACTT+AGG | - | chr4.1:19188726-19188745 | None:intergenic | 50.0% | |
| GAGGTCAATAAGAGGACTGG+AGG | + | chr4.1:19188084-19188103 | MS.gene36417:CDS | 50.0% | |
| GCGAGGTACATATCTGTCTC+AGG | - | chr4.1:19188687-19188706 | None:intergenic | 50.0% | |
| GTGTTCAAGGGGAGAAAGGT+GGG | + | chr4.1:19187941-19187960 | MS.gene36417:CDS | 50.0% | |
| GTTGGAGTTTCCTGAGGTTG+CGG | + | chr4.1:19188017-19188036 | MS.gene36417:CDS | 50.0% | |
| TGAAGTGGAGGCTGTGGAAA+CGG | + | chr4.1:19188422-19188441 | MS.gene36417:CDS | 50.0% | |
| TGCGATGATTCGCTGAACGT+TGG | - | chr4.1:19187377-19187396 | None:intergenic | 50.0% | |
| TGCTGGTGACCGTGAAATTG+AGG | + | chr4.1:19187612-19187631 | MS.gene36417:CDS | 50.0% | |
| TGTTGGGTGAGATCAAGGAG+AGG | + | chr4.1:19188241-19188260 | MS.gene36417:CDS | 50.0% | |
| TTATTAGGTGTCCGCGTGGT+GGG | + | chr4.1:19187698-19187717 | MS.gene36417:CDS | 50.0% | |
| ! | AACTTCTCGGTGTGCTGAGA+GGG | + | chr4.1:19188328-19188347 | MS.gene36417:CDS | 50.0% |
| ! | AAGTCTGGTTCAGGAGCAAG+TGG | + | chr4.1:19188726-19188745 | MS.gene36417:CDS | 50.0% |
| ! | GTTGGGGAAGAAGATGGGTT+TGG | + | chr4.1:19188923-19188942 | MS.gene36417:CDS | 50.0% |
| ! | TGAACCAGACTTAGGAGCAC+GGG | - | chr4.1:19188718-19188737 | None:intergenic | 50.0% |
| !! | AGATCTTCAAGCATCGGACG+AGG | - | chr4.1:19187454-19187473 | None:intergenic | 50.0% |
| !! | CCGTTGGTTCATGATGTGCT+TGG | + | chr4.1:19187898-19187917 | MS.gene36417:CDS | 50.0% |
| !! | TTGGGTTGCAAATGGTGGGT+TGG | + | chr4.1:19187999-19188018 | MS.gene36417:CDS | 50.0% |
| AACGGCGGGAACATCGTGAA+CGG | - | chr4.1:19187332-19187351 | None:intergenic | 55.0% | |
| CCACGCGGACACCTAATAAC+CGG | - | chr4.1:19187697-19187716 | None:intergenic | 55.0% | |
| CCGCGTTGGATCAAAGGATC+AGG | + | chr4.1:19187740-19187759 | MS.gene36417:CDS | 55.0% | |
| CGTTACCTGAGCTGACTGAG+AGG | + | chr4.1:19188178-19188197 | MS.gene36417:CDS | 55.0% | |
| GAGAGGGAAGGGAACCAAGA+TGG | + | chr4.1:19188344-19188363 | MS.gene36417:CDS | 55.0% | |
| GTTATTAGGTGTCCGCGTGG+TGG | + | chr4.1:19187697-19187716 | MS.gene36417:CDS | 55.0% | |
| TCAATCTCCACCGCAACCTC+AGG | - | chr4.1:19188030-19188049 | None:intergenic | 55.0% | |
| TCCACAGCCTCCACTTCAGT+CGG | - | chr4.1:19188420-19188439 | None:intergenic | 55.0% | |
| TGCTTCCTCTCAGTCAGCTC+AGG | - | chr4.1:19188186-19188205 | None:intergenic | 55.0% | |
| TGCTTCGGGGACCATAGCTT+CGG | + | chr4.1:19187474-19187493 | MS.gene36417:CDS | 55.0% | |
| TGGCTACCGCGTTGGATCAA+AGG | + | chr4.1:19187734-19187753 | MS.gene36417:CDS | 55.0% | |
| ! | CGTGCTCCTAAGTCTGGTTC+AGG | + | chr4.1:19188717-19188736 | MS.gene36417:CDS | 55.0% |
| ! | GAACCAGACTTAGGAGCACG+GGG | - | chr4.1:19188717-19188736 | None:intergenic | 55.0% |
| ! | GAACTTCTCGGTGTGCTGAG+AGG | + | chr4.1:19188327-19188346 | MS.gene36417:CDS | 55.0% |
| !! | ACAGACAGCTAGCTTTGGCG+AGG | + | chr4.1:19188628-19188647 | MS.gene36417:CDS | 55.0% |
| !! | TGGTGGGTTGGAGTTTCCTG+AGG | + | chr4.1:19188011-19188030 | MS.gene36417:CDS | 55.0% |
| ACGGCGGGAACATCGTGAAC+GGG | - | chr4.1:19187331-19187350 | None:intergenic | 60.0% | |
| CCGGTTATTAGGTGTCCGCG+TGG | + | chr4.1:19187694-19187713 | MS.gene36417:CDS | 60.0% | |
| CGGTGCGGAGTTTGATGGGA+CGG | + | chr4.1:19188113-19188132 | MS.gene36417:CDS | 60.0% | |
| GACTGGAGGGAATCACGGTG+CGG | + | chr4.1:19188098-19188117 | MS.gene36417:CDS | 60.0% | |
| GACTGGGCCGAGAAGCTCTA+TGG | + | chr4.1:19188555-19188574 | MS.gene36417:CDS | 60.0% | |
| GAGCACGGGGATCAAAAGCG+AGG | - | chr4.1:19188704-19188723 | None:intergenic | 60.0% | |
| GATCCCCGTGCTCCTAAGTC+TGG | + | chr4.1:19188711-19188730 | MS.gene36417:CDS | 60.0% | |
| GGAGTTTCCTGAGGTTGCGG+TGG | + | chr4.1:19188020-19188039 | MS.gene36417:CDS | 60.0% | |
| TCCGACTGAAGTGGAGGCTG+TGG | + | chr4.1:19188416-19188435 | MS.gene36417:CDS | 60.0% | |
| ! | AACGGCGCTGAGAGAGTGTG+AGG | + | chr4.1:19188440-19188459 | MS.gene36417:CDS | 60.0% |
| ! | CTCGGTGTGCTGAGAGGGAA+GGG | + | chr4.1:19188333-19188352 | MS.gene36417:CDS | 60.0% |
| ! | TCTCGGTGTGCTGAGAGGGA+AGG | + | chr4.1:19188332-19188351 | MS.gene36417:CDS | 60.0% |
| ! | TGAGATGGTGGCTACCGCGT+TGG | + | chr4.1:19187726-19187745 | MS.gene36417:CDS | 60.0% |
| !! | GGCGACGCTTGGTGTTGTTC+CGG | + | chr4.1:19187675-19187694 | MS.gene36417:CDS | 60.0% |
| GCGGTAGCCACCATCTCAGC+CGG | - | chr4.1:19187724-19187743 | None:intergenic | 65.0% | |
| ATCTCAGCCGGCCCACCACG+CGG | - | chr4.1:19187712-19187731 | None:intergenic | 70.0% | |
| ! | TGGTGGGCCGGCTGAGATGG+TGG | + | chr4.1:19187714-19187733 | MS.gene36417:CDS | 70.0% |
| !! | TAGGTGTCCGCGTGGTGGGC+CGG | + | chr4.1:19187702-19187721 | MS.gene36417:CDS | 70.0% |
| !! | GCGTGGTGGGCCGGCTGAGA+TGG | + | chr4.1:19187711-19187730 | MS.gene36417:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 19187036 | 19188974 | 19187036 | ID=MS.gene36417 |
| chr4.1 | mRNA | 19187036 | 19188974 | 19187036 | ID=MS.gene36417.t1;Parent=MS.gene36417 |
| chr4.1 | exon | 19187036 | 19187066 | 19187036 | ID=MS.gene36417.t1.exon1;Parent=MS.gene36417.t1 |
| chr4.1 | CDS | 19187036 | 19187066 | 19187036 | ID=cds.MS.gene36417.t1;Parent=MS.gene36417.t1 |
| chr4.1 | exon | 19187143 | 19188974 | 19187143 | ID=MS.gene36417.t1.exon2;Parent=MS.gene36417.t1 |
| chr4.1 | CDS | 19187143 | 19188974 | 19187143 | ID=cds.MS.gene36417.t1;Parent=MS.gene36417.t1 |
| Gene Sequence |
| Protein sequence |
