AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055975


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055975.t1 MTR_7g093560 97.979 841 17 0 1 841 1 841 0.0 1703
MS.gene055975.t1 MTR_8g011450 26.842 570 321 21 181 700 20 543 1.82e-42 165
MS.gene055975.t1 MTR_1g088410 22.500 480 267 10 331 708 160 636 1.74e-24 110
MS.gene055975.t1 MTR_5g004880 26.493 268 176 7 477 731 851 1110 1.05e-16 85.5
MS.gene055975.t1 MTR_5g004880 26.394 269 176 8 477 731 851 1111 1.06e-16 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055975.t1 AT5G06680 70.047 848 232 7 3 841 2 836 0.0 1206
MS.gene055975.t1 AT5G17410 26.224 572 335 22 178 708 59 584 2.03e-34 141
MS.gene055975.t1 AT5G17410 26.224 572 335 22 178 708 60 585 2.32e-34 140
MS.gene055975.t1 AT3G53760 23.124 493 282 13 331 729 176 665 4.69e-24 108
MS.gene055975.t1 AT3G53760 23.124 493 282 13 331 729 176 665 5.40e-24 108
MS.gene055975.t1 AT3G43610 25.088 283 175 8 477 731 850 1123 4.57e-15 80.5
MS.gene055975.t1 AT3G43610 25.623 281 176 8 477 731 813 1086 5.40e-15 80.1
MS.gene055975.t1 AT3G53760 28.221 163 112 3 570 729 477 637 8.49e-15 79.3
MS.gene055975.t1 AT3G43610 25.532 282 176 9 477 731 850 1124 3.53e-14 77.4

Find 199 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTATGGGTTGGGAATTT+TGG 0.031923 7.4:-15381281 None:intergenic
TTGAGGGGAGTTAGGGTTTA+TGG 0.083486 7.4:-15381295 None:intergenic
ATTCTCCGAAATGGTTAAAT+TGG 0.115991 7.4:-15381592 None:intergenic
GTATGATGACCCTGATATTT+TGG 0.145189 7.4:+15382841 MS.gene055975:CDS
GTTTATAAGCTTTGTGAATT+AGG 0.158306 7.4:+15381879 MS.gene055975:CDS
TGAGGCGCTGCCAAGTTCTT+TGG 0.213912 7.4:+15383134 MS.gene055975:CDS
TGGATTCAATTAGGGTTTCT+AGG 0.220908 7.4:+15381841 MS.gene055975:CDS
TTATATAATGTTTGAGGTCT+TGG 0.237238 7.4:+15383192 MS.gene055975:CDS
GCAAACACGGAGAAAATTTA+TGG 0.243617 7.4:-15382483 None:intergenic
TTTCGGAATTGAGGGGAGTT+AGG 0.248248 7.4:-15381303 None:intergenic
AGCATGTTGCAATCTATTAA+AGG 0.251716 7.4:-15383086 None:intergenic
TTTATAAGCTTTGTGAATTA+GGG 0.258383 7.4:+15381880 MS.gene055975:CDS
TCGGCGACGGCGGCGGAGTC+GGG 0.277688 7.4:-15381381 None:intergenic
TGAGGGGAGTTAGGGTTTAT+GGG 0.283183 7.4:-15381294 None:intergenic
CTGAGCCTATCCAAAATATC+AGG 0.289118 7.4:-15382851 None:intergenic
ATAAGCTCTTTCAAACTTGC+AGG 0.292246 7.4:+15382782 MS.gene055975:CDS
ATGGCAAGACGCGGTGGTTT+TGG 0.294822 7.4:+15382554 MS.gene055975:CDS
GTATTAGAAGTTATGCAATT+TGG 0.298927 7.4:-15383064 None:intergenic
CTGTCTGAGGGTGTGAGTTC+GGG 0.300602 7.4:+15382074 MS.gene055975:CDS
TCTTCCCAATTTAACCATTT+CGG 0.301391 7.4:+15381587 MS.gene055975:CDS
TTTCAAACTTGCAGGTTTGC+TGG 0.301868 7.4:+15382790 MS.gene055975:CDS
GGGAGAGGAGGTGGTGGACT+AGG 0.303828 7.4:-15381248 None:intergenic
AGTTATGCAATTTGGTTTCA+TGG 0.305186 7.4:-15383056 None:intergenic
ATTTGGTTTCATGGTCTTCC+AGG 0.315576 7.4:-15383047 None:intergenic
TTCTAGGGCTAGTAGTAGTA+TGG 0.316780 7.4:+15381857 MS.gene055975:CDS
AGTGGCTTTGGTGGAGAATT+TGG 0.318484 7.4:-15381472 None:intergenic
AATGGTGAAGAGGTGGGTTT+TGG 0.332311 7.4:+15382304 MS.gene055975:CDS
TATTATTTAAGAGGGTTGTT+GGG 0.333456 7.4:+15381904 MS.gene055975:CDS
CGGCGACGGCGGCGGAGTCG+GGG 0.337631 7.4:-15381380 None:intergenic
CAAAGACGCGGTGAAAATAA+TGG 0.338003 7.4:+15381621 MS.gene055975:CDS
TGGGTTTATTGAGATGAGTT+TGG 0.343645 7.4:+15381923 MS.gene055975:CDS
AACTGATACCCTTGAGTCAT+TGG 0.348158 7.4:+15382586 MS.gene055975:CDS
TTTAAGAGGTGGGGCGATGG+CGG 0.348905 7.4:+15382190 MS.gene055975:CDS
ATCGGCGACGGCGGCGGAGT+CGG 0.351723 7.4:-15381382 None:intergenic
GCGATTTCTCGTCGATTCTT+CGG 0.358869 7.4:-15381678 None:intergenic
GAGGCGCTGCCAAGTTCTTT+GGG 0.368485 7.4:+15383135 MS.gene055975:CDS
AAAGAGCTTATTGTGTTTGC+GGG 0.370957 7.4:-15382770 None:intergenic
GATGAGGTTGATGGCAGATT+TGG 0.372904 7.4:+15382151 MS.gene055975:CDS
GGAGTTAGGGTTTATGGGTT+GGG 0.375325 7.4:-15381289 None:intergenic
AAGAATTGATAAGCATCTAT+TGG 0.375584 7.4:+15382625 MS.gene055975:CDS
CGTTGAGGAGATTAGCGGTT+TGG 0.375829 7.4:+15382108 MS.gene055975:CDS
ATTATCGATATGAGTGGCTT+TGG 0.379589 7.4:-15381484 None:intergenic
AATTAGGGGTATTATTTAAG+AGG 0.385775 7.4:+15381895 MS.gene055975:CDS
AGATCTGGATGCAATATCTA+AGG 0.386160 7.4:+15383674 MS.gene055975:CDS
GTATTATTTAAGAGGGTTGT+TGG 0.392422 7.4:+15381903 MS.gene055975:CDS
GGGTTTATTGAGATGAGTTT+GGG 0.393560 7.4:+15381924 MS.gene055975:CDS
GCAATATTATATAATGTTTG+AGG 0.393888 7.4:+15383186 MS.gene055975:CDS
GCTGTCTGAGGGTGTGAGTT+CGG 0.398690 7.4:+15382073 MS.gene055975:CDS
TACTATTAGTGACTTGTAAA+GGG 0.399617 7.4:-15383341 None:intergenic
AGAGTGGAACATGCACTTAT+TGG 0.400373 7.4:+15383022 MS.gene055975:CDS
CGCTTTGGAGAGAGGGATAT+AGG 0.401266 7.4:+15382390 MS.gene055975:CDS
GAGCGTAACGGAGGGAGTTT+CGG 0.402356 7.4:-15381320 None:intergenic
GTTTGCTGGAAACAGCAATT+CGG 0.402370 7.4:+15382804 MS.gene055975:CDS
CGGAGGGAGTTTCGGAATTG+AGG 0.406268 7.4:-15381312 None:intergenic
TTTGCTGGAAACAGCAATTC+GGG 0.411585 7.4:+15382805 MS.gene055975:CDS
TTCTCCGAAATGGTTAAATT+GGG 0.417131 7.4:-15381591 None:intergenic
GTAGAGGATGTTGGGACGGT+TGG 0.418070 7.4:+15381957 MS.gene055975:CDS
TTGAACGTTATTCTCCGAAA+TGG 0.418718 7.4:-15381601 None:intergenic
TAGAGGATGTTGGGACGGTT+GGG 0.424317 7.4:+15381958 MS.gene055975:CDS
GTCAGCGAAGGAGAGGGCTT+CGG 0.432734 7.4:-15381442 None:intergenic
TTAAGAGGTGGGGCGATGGC+GGG 0.433851 7.4:+15382191 MS.gene055975:CDS
TTCGGAATTGAGGGGAGTTA+GGG 0.434034 7.4:-15381302 None:intergenic
TTACTATTAGTGACTTGTAA+AGG 0.435584 7.4:-15383342 None:intergenic
CGTGCTGCGACTGAAGATAC+AGG 0.437000 7.4:+15382527 MS.gene055975:CDS
GGTGGCGAGACGGCGTTTGA+TGG 0.437023 7.4:-15381406 None:intergenic
ATTAAGCGGTATTTGTTGCT+TGG 0.439442 7.4:+15382692 MS.gene055975:CDS
ATGAAAGCGGTGATAGGGGC+TGG 0.445222 7.4:+15382891 MS.gene055975:CDS
GGATTCAATTAGGGTTTCTA+GGG 0.447671 7.4:+15381842 MS.gene055975:CDS
TGCCACATGAAAGCGGTGAT+AGG 0.449321 7.4:+15382885 MS.gene055975:CDS
GGAGAGGAGGTGGTGGACTA+GGG 0.451408 7.4:-15381247 None:intergenic
GGATGTTGGGACGGTTGGGC+AGG 0.452257 7.4:+15381962 MS.gene055975:CDS
TTTGCGGGCACAGAAAGTTC+AGG 0.456716 7.4:-15382755 None:intergenic
GGGAGTTAGGGTTTATGGGT+TGG 0.459109 7.4:-15381290 None:intergenic
GATGGAATCGGCGACGGCGG+CGG 0.459167 7.4:-15381388 None:intergenic
AATATCTAATGGATATTGTT+GGG 0.459669 7.4:+15382732 MS.gene055975:CDS
TTTGGGTAGGTCTCCGGTAG+AGG 0.461635 7.4:+15381941 MS.gene055975:CDS
GCCACATGAAAGCGGTGATA+GGG 0.462826 7.4:+15382886 MS.gene055975:CDS
CGGTATTTGTTGCTTGGCCA+AGG 0.464399 7.4:+15382698 MS.gene055975:CDS
CAGATTTGGTTGAGAAGTGT+AGG 0.464625 7.4:+15382165 MS.gene055975:CDS
GGAGGGAGTTTCGGAATTGA+GGG 0.470363 7.4:-15381311 None:intergenic
TCCGATTCCGTTGCTGTCTG+AGG 0.477670 7.4:+15382061 MS.gene055975:CDS
GAAAGAGCTTATTGTGTTTG+CGG 0.479203 7.4:-15382771 None:intergenic
CTGTGAAAGCTGAATCGCTT+TGG 0.486329 7.4:+15382375 MS.gene055975:CDS
GGTCTCCGGTAGAGGATGTT+GGG 0.490035 7.4:+15381949 MS.gene055975:CDS
GATGAGTTTGGGTAGGTCTC+CGG 0.491451 7.4:+15381935 MS.gene055975:CDS
TGGTGGAGAATTTGGCGTAA+AGG 0.491712 7.4:-15381464 None:intergenic
CCCTCAGACAGCAACGGAAT+CGG 0.494521 7.4:-15382062 None:intergenic
TAATTTCAACCCAAAGAACT+TGG 0.495615 7.4:-15383144 None:intergenic
AGGTCTCCGGTAGAGGATGT+TGG 0.497314 7.4:+15381948 MS.gene055975:CDS
AGATCAACATGCTGCTGCAC+AGG 0.498245 7.4:-15383735 None:intergenic
TTGCTGTGAGGACCGTGGTT+GGG 0.500638 7.4:+15382502 MS.gene055975:CDS
GGCGACGGCGGCGGAGTCGG+GGG 0.503666 7.4:-15381379 None:intergenic
TTATTGAGATGAGTTTGGGT+AGG 0.504499 7.4:+15381928 MS.gene055975:CDS
GAGTGATTATTATAAGTTGT+TGG 0.505355 7.4:+15382013 MS.gene055975:CDS
TTGAGGTCTTGGAAATATCA+TGG 0.508420 7.4:+15383203 MS.gene055975:CDS
TGATATTGAAGAGATGAAGT+AGG 0.510039 7.4:-15381515 None:intergenic
ATCGATATGAGTGGCTTTGG+TGG 0.511381 7.4:-15381481 None:intergenic
AGTCATCGGAAGAAGAATCC+TGG 0.512777 7.4:+15383589 MS.gene055975:CDS
GAAGAATCCTGGATTGCTGA+TGG 0.517806 7.4:+15383600 MS.gene055975:CDS
CGTAAAGGTCAGCGAAGGAG+AGG 0.518178 7.4:-15381449 None:intergenic
TTTGCTGTGAGGACCGTGGT+TGG 0.518184 7.4:+15382501 MS.gene055975:CDS
AGCGAAGGAGAGGGCTTCGG+AGG 0.524409 7.4:-15381439 None:intergenic
TGCAGCTAGTTTCAGCATTG+AGG 0.525852 7.4:+15383116 MS.gene055975:CDS
GAAAATAATGGATTTAATGA+TGG 0.529424 7.4:+15381633 MS.gene055975:CDS
CAATATCTAATGGATATTGT+TGG 0.533980 7.4:+15382731 MS.gene055975:CDS
TGAAAGCGGTGATAGGGGCT+GGG 0.537532 7.4:+15382892 MS.gene055975:CDS
AACATGCACTTATTGGTGCC+TGG 0.540811 7.4:+15383029 MS.gene055975:CDS
CAAAGCGATTCAGCTTTCAC+AGG 0.540978 7.4:-15382374 None:intergenic
GGGCTGGGATGTATTCTCAC+TGG 0.541307 7.4:+15382907 MS.gene055975:CDS
GAGACGGCGTTTGATGGAAT+CGG 0.541621 7.4:-15381400 None:intergenic
CGGGGAATTATTTATCGTTG+AGG 0.543145 7.4:+15382093 MS.gene055975:CDS
ATTGTAGAGAAATCTCTCCT+TGG 0.543350 7.4:+15383304 MS.gene055975:CDS
AGATTTGGTTGAGAAGTGTA+GGG 0.543651 7.4:+15382166 MS.gene055975:CDS
GCTGAATCGCTTTGGAGAGA+GGG 0.544757 7.4:+15382383 MS.gene055975:CDS
AGCTGAATCGCTTTGGAGAG+AGG 0.546870 7.4:+15382382 MS.gene055975:CDS
TATGCTTGTCAAGGTGTGGA+TGG 0.547211 7.4:+15381774 MS.gene055975:CDS
TCTATGGAAGCTTAAGAGAG+TGG 0.549168 7.4:+15383006 MS.gene055975:CDS
GATATTGAAGAGATGAAGTA+GGG 0.550167 7.4:-15381514 None:intergenic
TTCATAAACTCATGAACCAT+CGG 0.551343 7.4:-15382245 None:intergenic
ATTAGGGGTATTATTTAAGA+GGG 0.552551 7.4:+15381896 MS.gene055975:CDS
TTCATTTACATGCTAGACAT+GGG 0.552742 7.4:+15382219 MS.gene055975:CDS
CCGATTCCGTTGCTGTCTGA+GGG 0.554083 7.4:+15382062 MS.gene055975:CDS
CCACTCATATCGATAATAAG+TGG 0.554560 7.4:+15381490 MS.gene055975:CDS
ATCAACCTCATCTTCACCAT+CGG 0.554617 7.4:-15382140 None:intergenic
TAAGTTGTTGGCTGTGCTTG+AGG 0.555869 7.4:+15382025 MS.gene055975:CDS
AAGTGAGATGGAAGTAGCCA+AGG 0.558851 7.4:+15383237 MS.gene055975:CDS
ACCGTCCCAACATCCTCTAC+CGG 0.558936 7.4:-15381954 None:intergenic
CACGGTCCTCACAGCAAACA+CGG 0.559449 7.4:-15382496 None:intergenic
TGCTAGACATGGGGATCCGA+TGG 0.562527 7.4:+15382229 MS.gene055975:CDS
AAGTAGATCATCAAGATCCT+TGG 0.565007 7.4:-15383254 None:intergenic
TTTATCGTTGAGGAGATTAG+CGG 0.569383 7.4:+15382103 MS.gene055975:CDS
AGAGAAGCCGAAATAAAAGA+AGG 0.570875 7.4:-15382431 None:intergenic
AAACGCCGTCTCGCCACCGA+TGG 0.571083 7.4:+15381411 MS.gene055975:CDS
GGCTTCGGAGGAGCGACCAT+CGG 0.574319 7.4:-15381427 None:intergenic
GCGTTTGATGGAATCGGCGA+CGG 0.574329 7.4:-15381394 None:intergenic
TGAGTATGTGAAATTGATGA+AGG 0.576385 7.4:+15381707 MS.gene055975:CDS
GATGGTGAAGATGAGGTTGA+TGG 0.578907 7.4:+15382142 MS.gene055975:CDS
TCCGGTAGAGGATGTTGGGA+CGG 0.579004 7.4:+15381953 MS.gene055975:CDS
GATATTGCACAAAATCACCT+TGG 0.583338 7.4:-15382715 None:intergenic
AAGAATCCTGGATTGCTGAT+GGG 0.583389 7.4:+15383601 MS.gene055975:CDS
AGCACTGTCTTGCGATTAAG+CGG 0.583774 7.4:+15382678 MS.gene055975:CDS
ATTCATTTACATGCTAGACA+TGG 0.583889 7.4:+15382218 MS.gene055975:CDS
GCATTCATGAGTTGCAAGCA+AGG 0.587012 7.4:+15383416 MS.gene055975:CDS
GACTGAAGATACAGGGGCAA+TGG 0.587037 7.4:+15382535 MS.gene055975:CDS
TTCATCAACCAATGACTCAA+GGG 0.587392 7.4:-15382594 None:intergenic
TTCGGAGGAGCGACCATCGG+TGG 0.587494 7.4:-15381424 None:intergenic
CTTCATCAACCAATGACTCA+AGG 0.590356 7.4:-15382595 None:intergenic
TGATGTGACTGAGGAAGCTA+TGG 0.592801 7.4:+15381737 MS.gene055975:CDS
GGAGTATTCATCATTGCAAG+AGG 0.593594 7.4:+15383695 MS.gene055975:CDS
AGAGAATGCGGTGAGCGTAA+CGG 0.594393 7.4:-15381332 None:intergenic
TTAAGTGGGAGGAGAGAATG+CGG 0.594666 7.4:-15381344 None:intergenic
CCACATGAAAGCGGTGATAG+GGG 0.595304 7.4:+15382887 MS.gene055975:CDS
AGCGACCATCGGTGGCGAGA+CGG 0.600302 7.4:-15381416 None:intergenic
GGTTTGGCTTGCTGAGCCGA+TGG 0.602661 7.4:+15382124 MS.gene055975:CDS
TTTGATGGAATCGGCGACGG+CGG 0.604505 7.4:-15381391 None:intergenic
CCCCTATCACCGCTTTCATG+TGG 0.604989 7.4:-15382887 None:intergenic
GTGCTGCGACTGAAGATACA+GGG 0.606272 7.4:+15382528 MS.gene055975:CDS
ATGCTTGTCAAGGTGTGGAT+GGG 0.607920 7.4:+15381775 MS.gene055975:CDS
AATTGGGAAGAAGAACGAAA+GGG 0.609981 7.4:-15381575 None:intergenic
TCTGTGAACACAGTATCTAG+TGG 0.610337 7.4:-15382947 None:intergenic
CCACTTATTATCGATATGAG+TGG 0.611006 7.4:-15381490 None:intergenic
GCGATTGACTGATAAGTCAT+CGG 0.612217 7.4:+15383575 MS.gene055975:CDS
GATTTATGCTTGTCAAGGTG+TGG 0.612803 7.4:+15381770 MS.gene055975:CDS
GGAAGAGAATGATGTGACTG+AGG 0.613157 7.4:+15381728 MS.gene055975:CDS
GATGTGATTTATGCTTGTCA+AGG 0.615049 7.4:+15381765 MS.gene055975:CDS
CTCGAGACCAGAAGAAAACA+CGG 0.618015 7.4:+15383550 MS.gene055975:CDS
TTATAAGCTTTGTGAATTAG+GGG 0.619485 7.4:+15381881 MS.gene055975:CDS
CACTCATATCGATAATAAGT+GGG 0.620520 7.4:+15381491 MS.gene055975:CDS
TGGTGTTGTCATTCTTGCGA+GGG 0.621820 7.4:+15381653 MS.gene055975:CDS
AAAATTCATTGAAATCGAGA+CGG 0.627773 7.4:-15383773 None:intergenic
GAGGGAGTTTCGGAATTGAG+GGG 0.627860 7.4:-15381310 None:intergenic
AAATTGGGAAGAAGAACGAA+AGG 0.628457 7.4:-15381576 None:intergenic
TTTCGGCTTCTCTTGCGCAG+AGG 0.633142 7.4:+15382441 MS.gene055975:CDS
TATTGGATGTAATTTATGAG+AGG 0.636213 7.4:+15382642 MS.gene055975:CDS
GAATGCGGTGAGCGTAACGG+AGG 0.637646 7.4:-15381329 None:intergenic
GTAAAGGTCAGCGAAGGAGA+GGG 0.638021 7.4:-15381448 None:intergenic
GGGACTGAGAGAGTTCTCCA+AGG 0.638568 7.4:-15383321 None:intergenic
TGAGCCTATCCAAAATATCA+GGG 0.639430 7.4:-15382850 None:intergenic
TCATTTACATGCTAGACATG+GGG 0.643297 7.4:+15382220 MS.gene055975:CDS
TGGTTCATGAGTTTATGAAG+AGG 0.645000 7.4:+15382249 MS.gene055975:CDS
AAAGCCTTAACAAAACGCGC+TGG 0.650198 7.4:+15383627 MS.gene055975:CDS
ATGGTGTTGTCATTCTTGCG+AGG 0.651353 7.4:+15381652 MS.gene055975:CDS
GGGGCAATGGCAAGACGCGG+TGG 0.651719 7.4:+15382548 MS.gene055975:CDS
AAATTTGATGAAGAGAGTGA+TGG 0.655630 7.4:+15381807 MS.gene055975:CDS
CTGAGCCGATGGTGAAGATG+AGG 0.659393 7.4:+15382135 MS.gene055975:CDS
AATGCGGTGAGCGTAACGGA+GGG 0.662551 7.4:-15381328 None:intergenic
TGTCTGAGGGTGTGAGTTCG+GGG 0.665593 7.4:+15382075 MS.gene055975:CDS
TCGCAGCACGAGCCCAACCA+CGG 0.667283 7.4:-15382514 None:intergenic
AAAATGATGCCACATGAAAG+CGG 0.670653 7.4:+15382878 MS.gene055975:CDS
CTCACACCCTCAGACAGCAA+CGG 0.671898 7.4:-15382068 None:intergenic
CGTGTTTGCTGTGAGGACCG+TGG 0.673375 7.4:+15382497 MS.gene055975:CDS
AGGGTCATTCGATTTAGCAG+CGG 0.676282 7.4:-15381556 None:intergenic
CTTCGTATAAAATATCCGCA+TGG 0.678523 7.4:-15383393 None:intergenic
ACAGGGGCAATGGCAAGACG+CGG 0.679094 7.4:+15382545 MS.gene055975:CDS
TTTGGCGTAAAGGTCAGCGA+AGG 0.679814 7.4:-15381454 None:intergenic
CTGGTCTCGAGAGGACAGTG+AGG 0.696188 7.4:-15383538 None:intergenic
GAGAATAACGTTCAAAGACG+CGG 0.702247 7.4:+15381609 MS.gene055975:CDS
TGCTGCGACTGAAGATACAG+GGG 0.704839 7.4:+15382529 MS.gene055975:CDS
TCACAGAGTCTGTGATGACG+AGG 0.709275 7.4:+15382963 MS.gene055975:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGAATTTTTAATTTTCTA+TGG + chr7.4:15382990-15383009 MS.gene055975:CDS 10.0%
!! GCAATATTATATAATGTTTG+AGG + chr7.4:15383186-15383205 MS.gene055975:CDS 20.0%
!!! AATATCTAATGGATATTGTT+GGG + chr7.4:15382732-15382751 MS.gene055975:CDS 20.0%
!!! ATGTTTTATTGGATTCAATT+AGG + chr7.4:15381832-15381851 MS.gene055975:CDS 20.0%
!!! ATTTCAATGAATTTTATAGG+CGG + chr7.4:15383781-15383800 MS.gene055975:CDS 20.0%
!!! GAAAATAATGGATTTAATGA+TGG + chr7.4:15381633-15381652 MS.gene055975:CDS 20.0%
!!! TCGATTTCAATGAATTTTAT+AGG + chr7.4:15383778-15383797 MS.gene055975:CDS 20.0%
!!! TGTTTTATTGGATTCAATTA+GGG + chr7.4:15381833-15381852 MS.gene055975:CDS 20.0%
!!! TTGATCTTATATTACGTTTT+CGG + chr7.4:15383368-15383387 MS.gene055975:CDS 20.0%
!!! TTTATAAGCTTTGTGAATTA+GGG + chr7.4:15381880-15381899 MS.gene055975:CDS 20.0%
! AAAATTCATTGAAATCGAGA+CGG - chr7.4:15383776-15383795 None:intergenic 25.0%
! AAGAATTGATAAGCATCTAT+TGG + chr7.4:15382625-15382644 MS.gene055975:CDS 25.0%
! GAGTGATTATTATAAGTTGT+TGG + chr7.4:15382013-15382032 MS.gene055975:CDS 25.0%
! GTATTAGAAGTTATGCAATT+TGG - chr7.4:15383067-15383086 None:intergenic 25.0%
! TATTATTTAAGAGGGTTGTT+GGG + chr7.4:15381904-15381923 MS.gene055975:CDS 25.0%
! TATTGGATGTAATTTATGAG+AGG + chr7.4:15382642-15382661 MS.gene055975:CDS 25.0%
!! CAATATCTAATGGATATTGT+TGG + chr7.4:15382731-15382750 MS.gene055975:CDS 25.0%
!! GTTTATAAGCTTTGTGAATT+AGG + chr7.4:15381879-15381898 MS.gene055975:CDS 25.0%
!! TACTATTAGTGACTTGTAAA+GGG - chr7.4:15383344-15383363 None:intergenic 25.0%
!! TGATTTTGTGCAATATCTAA+TGG + chr7.4:15382721-15382740 MS.gene055975:CDS 25.0%
!! TTACTATTAGTGACTTGTAA+AGG - chr7.4:15383345-15383364 None:intergenic 25.0%
!! TTATAAGCTTTGTGAATTAG+GGG + chr7.4:15381881-15381900 MS.gene055975:CDS 25.0%
!! TTATATAATGTTTGAGGTCT+TGG + chr7.4:15383192-15383211 MS.gene055975:CDS 25.0%
!! TTGTTGAGTTTTTCATTGTT+GGG + chr7.4:15382348-15382367 MS.gene055975:CDS 25.0%
!! TTTCAATGAATTTTATAGGC+GGG + chr7.4:15383782-15383801 MS.gene055975:CDS 25.0%
!! TTTGTTGAGTTTTTCATTGT+TGG + chr7.4:15382347-15382366 MS.gene055975:CDS 25.0%
!!! AATTAGGGGTATTATTTAAG+AGG + chr7.4:15381895-15381914 MS.gene055975:CDS 25.0%
!!! ATTAGGGGTATTATTTAAGA+GGG + chr7.4:15381896-15381915 MS.gene055975:CDS 25.0%
!!! TATGCTTCCTTCTTTTATTT+CGG + chr7.4:15382424-15382443 MS.gene055975:CDS 25.0%
AAATGTCAAACATGGCAATA+TGG - chr7.4:15383488-15383507 None:intergenic 30.0%
AAATTTGATGAAGAGAGTGA+TGG + chr7.4:15381807-15381826 MS.gene055975:CDS 30.0%
AATGTCAAACATGGCAATAT+GGG - chr7.4:15383487-15383506 None:intergenic 30.0%
AGATGATCAAATGTCAAACA+TGG - chr7.4:15383496-15383515 None:intergenic 30.0%
AGCATGTTGCAATCTATTAA+AGG - chr7.4:15383089-15383108 None:intergenic 30.0%
ATTCATTTACATGCTAGACA+TGG + chr7.4:15382218-15382237 MS.gene055975:CDS 30.0%
ATTCTCCGAAATGGTTAAAT+TGG - chr7.4:15381595-15381614 None:intergenic 30.0%
CACTCATATCGATAATAAGT+GGG + chr7.4:15381491-15381510 MS.gene055975:CDS 30.0%
GATATTGAAGAGATGAAGTA+GGG - chr7.4:15381517-15381536 None:intergenic 30.0%
GTATTATTTAAGAGGGTTGT+TGG + chr7.4:15381903-15381922 MS.gene055975:CDS 30.0%
TAATTTCAACCCAAAGAACT+TGG - chr7.4:15383147-15383166 None:intergenic 30.0%
TCTTCCCAATTTAACCATTT+CGG + chr7.4:15381587-15381606 MS.gene055975:CDS 30.0%
TGAGTATGTGAAATTGATGA+AGG + chr7.4:15381707-15381726 MS.gene055975:CDS 30.0%
TGATATTGAAGAGATGAAGT+AGG - chr7.4:15381518-15381537 None:intergenic 30.0%
TGGTGAATTTCTCCAAAAAA+TGG + chr7.4:15383647-15383666 MS.gene055975:CDS 30.0%
TTCATAAACTCATGAACCAT+CGG - chr7.4:15382248-15382267 None:intergenic 30.0%
TTCATTTACATGCTAGACAT+GGG + chr7.4:15382219-15382238 MS.gene055975:CDS 30.0%
TTCTCCGAAATGGTTAAATT+GGG - chr7.4:15381594-15381613 None:intergenic 30.0%
! AGTTATGCAATTTGGTTTCA+TGG - chr7.4:15383059-15383078 None:intergenic 30.0%
! GAGTGATGGTTATGTTTTAT+TGG + chr7.4:15381821-15381840 MS.gene055975:CDS 30.0%
!!! GTCAAACTTTTTAAGTGAGA+TGG + chr7.4:15383225-15383244 MS.gene055975:CDS 30.0%
AAAATGATGCCACATGAAAG+CGG + chr7.4:15382878-15382897 MS.gene055975:CDS 35.0%
AAAGAGCTTATTGTGTTTGC+GGG - chr7.4:15382773-15382792 None:intergenic 35.0%
AAATTGGGAAGAAGAACGAA+AGG - chr7.4:15381579-15381598 None:intergenic 35.0%
AAGTAGATCATCAAGATCCT+TGG - chr7.4:15383257-15383276 None:intergenic 35.0%
AATATGGGGAGAAGAAATTG+AGG - chr7.4:15383472-15383491 None:intergenic 35.0%
AATTGGGAAGAAGAACGAAA+GGG - chr7.4:15381578-15381597 None:intergenic 35.0%
AGAGAAGCCGAAATAAAAGA+AGG - chr7.4:15382434-15382453 None:intergenic 35.0%
AGATCTGGATGCAATATCTA+AGG + chr7.4:15383674-15383693 MS.gene055975:CDS 35.0%
ATAAGCTCTTTCAAACTTGC+AGG + chr7.4:15382782-15382801 MS.gene055975:CDS 35.0%
ATGTCAAACATGGCAATATG+GGG - chr7.4:15383486-15383505 None:intergenic 35.0%
ATTATCGATATGAGTGGCTT+TGG - chr7.4:15381487-15381506 None:intergenic 35.0%
ATTGTAGAGAAATCTCTCCT+TGG + chr7.4:15383304-15383323 MS.gene055975:CDS 35.0%
CCAAAAAATGGAACAAGATC+TGG + chr7.4:15383659-15383678 MS.gene055975:CDS 35.0%
CCACTCATATCGATAATAAG+TGG + chr7.4:15381490-15381509 MS.gene055975:CDS 35.0%
CCACTTATTATCGATATGAG+TGG - chr7.4:15381493-15381512 None:intergenic 35.0%
CTCTTCACCATTTCAAAAAG+CGG - chr7.4:15382296-15382315 None:intergenic 35.0%
CTTCGTATAAAATATCCGCA+TGG - chr7.4:15383396-15383415 None:intergenic 35.0%
GAAAGAGCTTATTGTGTTTG+CGG - chr7.4:15382774-15382793 None:intergenic 35.0%
GATATTGCACAAAATCACCT+TGG - chr7.4:15382718-15382737 None:intergenic 35.0%
GATGTGATTTATGCTTGTCA+AGG + chr7.4:15381765-15381784 MS.gene055975:CDS 35.0%
GCAAACACGGAGAAAATTTA+TGG - chr7.4:15382486-15382505 None:intergenic 35.0%
GGATTCAATTAGGGTTTCTA+GGG + chr7.4:15381842-15381861 MS.gene055975:CDS 35.0%
GGGTTTATTGAGATGAGTTT+GGG + chr7.4:15381924-15381943 MS.gene055975:CDS 35.0%
TCATTTACATGCTAGACATG+GGG + chr7.4:15382220-15382239 MS.gene055975:CDS 35.0%
TGAGCCTATCCAAAATATCA+GGG - chr7.4:15382853-15382872 None:intergenic 35.0%
TGGATTCAATTAGGGTTTCT+AGG + chr7.4:15381841-15381860 MS.gene055975:CDS 35.0%
TGGGTTTATTGAGATGAGTT+TGG + chr7.4:15381923-15381942 MS.gene055975:CDS 35.0%
TGGTTCATGAGTTTATGAAG+AGG + chr7.4:15382249-15382268 MS.gene055975:CDS 35.0%
TTATTGAGATGAGTTTGGGT+AGG + chr7.4:15381928-15381947 MS.gene055975:CDS 35.0%
TTCATCAACCAATGACTCAA+GGG - chr7.4:15382597-15382616 None:intergenic 35.0%
TTGAACGTTATTCTCCGAAA+TGG - chr7.4:15381604-15381623 None:intergenic 35.0%
TTGAGGTCTTGGAAATATCA+TGG + chr7.4:15383203-15383222 MS.gene055975:CDS 35.0%
TTTATCGTTGAGGAGATTAG+CGG + chr7.4:15382103-15382122 MS.gene055975:CDS 35.0%
! AGATTTGGTTGAGAAGTGTA+GGG + chr7.4:15382166-15382185 MS.gene055975:CDS 35.0%
! ATTAAGCGGTATTTGTTGCT+TGG + chr7.4:15382692-15382711 MS.gene055975:CDS 35.0%
! CATGCGGATATTTTATACGA+AGG + chr7.4:15383394-15383413 MS.gene055975:CDS 35.0%
! GTATGATGACCCTGATATTT+TGG + chr7.4:15382841-15382860 MS.gene055975:CDS 35.0%
!! ATGACCCTGATATTTTGGAT+AGG + chr7.4:15382846-15382865 MS.gene055975:CDS 35.0%
!! TGATATTTTGGATAGGCTCA+GGG + chr7.4:15382853-15382872 MS.gene055975:CDS 35.0%
!!! CCAGATCTTGTTCCATTTTT+TGG - chr7.4:15383662-15383681 None:intergenic 35.0%
!!! GTTTATGGGTTGGGAATTTT+GGG - chr7.4:15381283-15381302 None:intergenic 35.0%
!!! TTTATGGGTTGGGAATTTTG+GGG - chr7.4:15381282-15381301 None:intergenic 35.0%
!!! TTTTGAAATGGTGAAGAGGT+GGG + chr7.4:15382298-15382317 MS.gene055975:CDS 35.0%
!!! TTTTTGAAATGGTGAAGAGG+TGG + chr7.4:15382297-15382316 MS.gene055975:CDS 35.0%
AACTGATACCCTTGAGTCAT+TGG + chr7.4:15382586-15382605 MS.gene055975:CDS 40.0%
AAGAATCCTGGATTGCTGAT+GGG + chr7.4:15383601-15383620 MS.gene055975:CDS 40.0%
AGAGTGGAACATGCACTTAT+TGG + chr7.4:15383022-15383041 MS.gene055975:CDS 40.0%
ATCAACCTCATCTTCACCAT+CGG - chr7.4:15382143-15382162 None:intergenic 40.0%
CAAAGACGCGGTGAAAATAA+TGG + chr7.4:15381621-15381640 MS.gene055975:CDS 40.0%
CGGGGAATTATTTATCGTTG+AGG + chr7.4:15382093-15382112 MS.gene055975:CDS 40.0%
CTGAGCCTATCCAAAATATC+AGG - chr7.4:15382854-15382873 None:intergenic 40.0%
CTTCATCAACCAATGACTCA+AGG - chr7.4:15382598-15382617 None:intergenic 40.0%
GAGAATAACGTTCAAAGACG+CGG + chr7.4:15381609-15381628 MS.gene055975:CDS 40.0%
GATTTATGCTTGTCAAGGTG+TGG + chr7.4:15381770-15381789 MS.gene055975:CDS 40.0%
GCGATTGACTGATAAGTCAT+CGG + chr7.4:15383575-15383594 MS.gene055975:CDS 40.0%
TCTATGGAAGCTTAAGAGAG+TGG + chr7.4:15383006-15383025 MS.gene055975:CDS 40.0%
TCTGTGAACACAGTATCTAG+TGG - chr7.4:15382950-15382969 None:intergenic 40.0%
TTTCAAACTTGCAGGTTTGC+TGG + chr7.4:15382790-15382809 MS.gene055975:CDS 40.0%
TTTGCTGGAAACAGCAATTC+GGG + chr7.4:15382805-15382824 MS.gene055975:CDS 40.0%
! ACTAGGGCTTTTACTAGATC+TGG - chr7.4:15381234-15381253 None:intergenic 40.0%
! ATTTGGTTTCATGGTCTTCC+AGG - chr7.4:15383050-15383069 None:intergenic 40.0%
! CAGATTTGGTTGAGAAGTGT+AGG + chr7.4:15382165-15382184 MS.gene055975:CDS 40.0%
! CTAGGGCTTTTACTAGATCT+GGG - chr7.4:15381233-15381252 None:intergenic 40.0%
! GGAGTATTCATCATTGCAAG+AGG + chr7.4:15383695-15383714 MS.gene055975:CDS 40.0%
! GTTTGCTGGAAACAGCAATT+CGG + chr7.4:15382804-15382823 MS.gene055975:CDS 40.0%
!! CTGATATTTTGGATAGGCTC+AGG + chr7.4:15382852-15382871 MS.gene055975:CDS 40.0%
!! GGAATTTTGGGGGAGATTTT+GGG - chr7.4:15381271-15381290 None:intergenic 40.0%
!! TTCTAGGGCTAGTAGTAGTA+TGG + chr7.4:15381857-15381876 MS.gene055975:CDS 40.0%
!!! AAGTGTAGGGTTTTAAGAGG+TGG + chr7.4:15382179-15382198 MS.gene055975:CDS 40.0%
!!! AGTGTAGGGTTTTAAGAGGT+GGG + chr7.4:15382180-15382199 MS.gene055975:CDS 40.0%
!!! CGCTTTTTGAAATGGTGAAG+AGG + chr7.4:15382294-15382313 MS.gene055975:CDS 40.0%
!!! GAGAAGTGTAGGGTTTTAAG+AGG + chr7.4:15382176-15382195 MS.gene055975:CDS 40.0%
!!! GGTTTATGGGTTGGGAATTT+TGG - chr7.4:15381284-15381303 None:intergenic 40.0%
!!! GTGTTCTCCGCTTTTTGAAA+TGG + chr7.4:15382286-15382305 MS.gene055975:CDS 40.0%
!!! TTATGGGTTGGGAATTTTGG+GGG - chr7.4:15381281-15381300 None:intergenic 40.0%
AAAGCCTTAACAAAACGCGC+TGG + chr7.4:15383627-15383646 MS.gene055975:CDS 45.0%
AAGTGAGATGGAAGTAGCCA+AGG + chr7.4:15383237-15383256 MS.gene055975:CDS 45.0%
AGCACTGTCTTGCGATTAAG+CGG + chr7.4:15382678-15382697 MS.gene055975:CDS 45.0%
AGGGTCATTCGATTTAGCAG+CGG - chr7.4:15381559-15381578 None:intergenic 45.0%
AGTCATCGGAAGAAGAATCC+TGG + chr7.4:15383589-15383608 MS.gene055975:CDS 45.0%
ATGCTTGTCAAGGTGTGGAT+GGG + chr7.4:15381775-15381794 MS.gene055975:CDS 45.0%
CAAAGCGATTCAGCTTTCAC+AGG - chr7.4:15382377-15382396 None:intergenic 45.0%
CTCGAGACCAGAAGAAAACA+CGG + chr7.4:15383550-15383569 MS.gene055975:CDS 45.0%
CTGTGAAAGCTGAATCGCTT+TGG + chr7.4:15382375-15382394 MS.gene055975:CDS 45.0%
GAAGAATCCTGGATTGCTGA+TGG + chr7.4:15383600-15383619 MS.gene055975:CDS 45.0%
GATGGTGAAGATGAGGTTGA+TGG + chr7.4:15382142-15382161 MS.gene055975:CDS 45.0%
GCATTCATGAGTTGCAAGCA+AGG + chr7.4:15383416-15383435 MS.gene055975:CDS 45.0%
GGAAGAGAATGATGTGACTG+AGG + chr7.4:15381728-15381747 MS.gene055975:CDS 45.0%
GGAGTTAGGGTTTATGGGTT+GGG - chr7.4:15381292-15381311 None:intergenic 45.0%
TATGCTTGTCAAGGTGTGGA+TGG + chr7.4:15381774-15381793 MS.gene055975:CDS 45.0%
TGAGGGGAGTTAGGGTTTAT+GGG - chr7.4:15381297-15381316 None:intergenic 45.0%
TGATGTGACTGAGGAAGCTA+TGG + chr7.4:15381737-15381756 MS.gene055975:CDS 45.0%
TGGTGGAGAATTTGGCGTAA+AGG - chr7.4:15381467-15381486 None:intergenic 45.0%
TTAAGTGGGAGGAGAGAATG+CGG - chr7.4:15381347-15381366 None:intergenic 45.0%
TTCGGAATTGAGGGGAGTTA+GGG - chr7.4:15381305-15381324 None:intergenic 45.0%
TTGAGGGGAGTTAGGGTTTA+TGG - chr7.4:15381298-15381317 None:intergenic 45.0%
TTTCGGAATTGAGGGGAGTT+AGG - chr7.4:15381306-15381325 None:intergenic 45.0%
! AACATGCACTTATTGGTGCC+TGG + chr7.4:15383029-15383048 MS.gene055975:CDS 45.0%
! ATCGCTTCCGTGTTTTCTTC+TGG - chr7.4:15383560-15383579 None:intergenic 45.0%
! ATTACGTTTTCGGAGCCATG+CGG + chr7.4:15383378-15383397 MS.gene055975:CDS 45.0%
! TAAGTTGTTGGCTGTGCTTG+AGG + chr7.4:15382025-15382044 MS.gene055975:CDS 45.0%
! TGCAGCTAGTTTCAGCATTG+AGG + chr7.4:15383116-15383135 MS.gene055975:CDS 45.0%
! TGTTTTCTTCTGGTCTCGAG+AGG - chr7.4:15383550-15383569 None:intergenic 45.0%
! TTTTCTCCCATCAGCAATCC+AGG - chr7.4:15383610-15383629 None:intergenic 45.0%
!! AATGGTGAAGAGGTGGGTTT+TGG + chr7.4:15382304-15382323 MS.gene055975:CDS 45.0%
!! AGTGGCTTTGGTGGAGAATT+TGG - chr7.4:15381475-15381494 None:intergenic 45.0%
!! ATCGATATGAGTGGCTTTGG+TGG - chr7.4:15381484-15381503 None:intergenic 45.0%
!! ATGGTGTTGTCATTCTTGCG+AGG + chr7.4:15381652-15381671 MS.gene055975:CDS 45.0%
!! GATGAGGTTGATGGCAGATT+TGG + chr7.4:15382151-15382170 MS.gene055975:CDS 45.0%
!! GCGATTTCTCGTCGATTCTT+CGG - chr7.4:15381681-15381700 None:intergenic 45.0%
!! GGGAATTTTGGGGGAGATTT+TGG - chr7.4:15381272-15381291 None:intergenic 45.0%
!! TGGTGTTGTCATTCTTGCGA+GGG + chr7.4:15381653-15381672 MS.gene055975:CDS 45.0%
!! TTCACCAGCGCGTTTTGTTA+AGG - chr7.4:15383634-15383653 None:intergenic 45.0%
!!! GTGTAGGGTTTTAAGAGGTG+GGG + chr7.4:15382181-15382200 MS.gene055975:CDS 45.0%
!!! TGAAGAGGTGGGTTTTGGAA+GGG + chr7.4:15382309-15382328 MS.gene055975:CDS 45.0%
!!! TTTTCTCCGTGTTTGCTGTG+AGG + chr7.4:15382490-15382509 MS.gene055975:CDS 45.0%
AGAGAATGCGGTGAGCGTAA+CGG - chr7.4:15381335-15381354 None:intergenic 50.0%
AGATCAACATGCTGCTGCAC+AGG - chr7.4:15383738-15383757 None:intergenic 50.0%
CCACATGAAAGCGGTGATAG+GGG + chr7.4:15382887-15382906 MS.gene055975:CDS 50.0%
CGTTGAGGAGATTAGCGGTT+TGG + chr7.4:15382108-15382127 MS.gene055975:CDS 50.0%
GACTGAAGATACAGGGGCAA+TGG + chr7.4:15382535-15382554 MS.gene055975:CDS 50.0%
GAGACGGCGTTTGATGGAAT+CGG - chr7.4:15381403-15381422 None:intergenic 50.0%
GAGGGAGTTTCGGAATTGAG+GGG - chr7.4:15381313-15381332 None:intergenic 50.0%
GATGAGTTTGGGTAGGTCTC+CGG + chr7.4:15381935-15381954 MS.gene055975:CDS 50.0%
GCCACATGAAAGCGGTGATA+GGG + chr7.4:15382886-15382905 MS.gene055975:CDS 50.0%
GGAGGGAGTTTCGGAATTGA+GGG - chr7.4:15381314-15381333 None:intergenic 50.0%
GGGAGTTAGGGTTTATGGGT+TGG - chr7.4:15381293-15381312 None:intergenic 50.0%
GTAAAGGTCAGCGAAGGAGA+GGG - chr7.4:15381451-15381470 None:intergenic 50.0%
GTGCTGCGACTGAAGATACA+GGG + chr7.4:15382528-15382547 MS.gene055975:CDS 50.0%
TAGAGGATGTTGGGACGGTT+GGG + chr7.4:15381958-15381977 MS.gene055975:CDS 50.0%
TGCCACATGAAAGCGGTGAT+AGG + chr7.4:15382885-15382904 MS.gene055975:CDS 50.0%
TGCTGCGACTGAAGATACAG+GGG + chr7.4:15382529-15382548 MS.gene055975:CDS 50.0%
TTTGCGGGCACAGAAAGTTC+AGG - chr7.4:15382758-15382777 None:intergenic 50.0%
TTTGGCGTAAAGGTCAGCGA+AGG - chr7.4:15381457-15381476 None:intergenic 50.0%
! CGGTATTTGTTGCTTGGCCA+AGG + chr7.4:15382698-15382717 MS.gene055975:CDS 50.0%
! CTCTTGCGCAGAGGATTTTG+AGG + chr7.4:15382450-15382469 MS.gene055975:CDS 50.0%
! GGCTTTTTGTGCTGCATTGC+AGG + chr7.4:15381983-15382002 MS.gene055975:CDS 50.0%
! TCACAGAGTCTGTGATGACG+AGG + chr7.4:15382963-15382982 MS.gene055975:CDS 50.0%
!! AGCTGAATCGCTTTGGAGAG+AGG + chr7.4:15382382-15382401 MS.gene055975:CDS 50.0%
!! CGCTTTGGAGAGAGGGATAT+AGG + chr7.4:15382390-15382409 MS.gene055975:CDS 50.0%
!! GCTGAATCGCTTTGGAGAGA+GGG + chr7.4:15382383-15382402 MS.gene055975:CDS 50.0%
!! TTTGGGGGAGATTTTGGGAG+AGG - chr7.4:15381266-15381285 None:intergenic 50.0%
!!! AGACGCGGTGGTTTTGGTTA+CGG + chr7.4:15382560-15382579 MS.gene055975:CDS 50.0%
!!! GAAGAGGTGGGTTTTGGAAG+GGG + chr7.4:15382310-15382329 MS.gene055975:CDS 50.0%
!!! GTGAAGAGGTGGGTTTTGGA+AGG + chr7.4:15382308-15382327 MS.gene055975:CDS 50.0%
ACCGTCCCAACATCCTCTAC+CGG - chr7.4:15381957-15381976 None:intergenic 55.0%
AGGTCTCCGGTAGAGGATGT+TGG + chr7.4:15381948-15381967 MS.gene055975:CDS 55.0%
ATGAAAGCGGTGATAGGGGC+TGG + chr7.4:15382891-15382910 MS.gene055975:CDS 55.0%
CACGGTCCTCACAGCAAACA+CGG - chr7.4:15382499-15382518 None:intergenic 55.0%
CCCCTATCACCGCTTTCATG+TGG - chr7.4:15382890-15382909 None:intergenic 55.0%
CCCTCAGACAGCAACGGAAT+CGG - chr7.4:15382065-15382084 None:intergenic 55.0%
CCGATTCCGTTGCTGTCTGA+GGG + chr7.4:15382062-15382081 MS.gene055975:CDS 55.0%
CGGAGGGAGTTTCGGAATTG+AGG - chr7.4:15381315-15381334 None:intergenic 55.0%
CGTAAAGGTCAGCGAAGGAG+AGG - chr7.4:15381452-15381471 None:intergenic 55.0%
CGTGCTGCGACTGAAGATAC+AGG + chr7.4:15382527-15382546 MS.gene055975:CDS 55.0%
CTCACACCCTCAGACAGCAA+CGG - chr7.4:15382071-15382090 None:intergenic 55.0%
CTGAGCCGATGGTGAAGATG+AGG + chr7.4:15382135-15382154 MS.gene055975:CDS 55.0%
GCGTTTGATGGAATCGGCGA+CGG - chr7.4:15381397-15381416 None:intergenic 55.0%
GGGACTGAGAGAGTTCTCCA+AGG - chr7.4:15383324-15383343 None:intergenic 55.0%
GGGCTGGGATGTATTCTCAC+TGG + chr7.4:15382907-15382926 MS.gene055975:CDS 55.0%
GGTCTCCGGTAGAGGATGTT+GGG + chr7.4:15381949-15381968 MS.gene055975:CDS 55.0%
GTAGAGGATGTTGGGACGGT+TGG + chr7.4:15381957-15381976 MS.gene055975:CDS 55.0%
TCCGATTCCGTTGCTGTCTG+AGG + chr7.4:15382061-15382080 MS.gene055975:CDS 55.0%
TCCGGTAGAGGATGTTGGGA+CGG + chr7.4:15381953-15381972 MS.gene055975:CDS 55.0%
TGAAAGCGGTGATAGGGGCT+GGG + chr7.4:15382892-15382911 MS.gene055975:CDS 55.0%
TGCTAGACATGGGGATCCGA+TGG + chr7.4:15382229-15382248 MS.gene055975:CDS 55.0%
TTGCTGTGAGGACCGTGGTT+GGG + chr7.4:15382502-15382521 MS.gene055975:CDS 55.0%
TTTAAGAGGTGGGGCGATGG+CGG + chr7.4:15382190-15382209 MS.gene055975:CDS 55.0%
TTTCGGCTTCTCTTGCGCAG+AGG + chr7.4:15382441-15382460 MS.gene055975:CDS 55.0%
TTTGATGGAATCGGCGACGG+CGG - chr7.4:15381394-15381413 None:intergenic 55.0%
TTTGGGTAGGTCTCCGGTAG+AGG + chr7.4:15381941-15381960 MS.gene055975:CDS 55.0%
! AATGCGGTGAGCGTAACGGA+GGG - chr7.4:15381331-15381350 None:intergenic 55.0%
! ATGGCAAGACGCGGTGGTTT+TGG + chr7.4:15382554-15382573 MS.gene055975:CDS 55.0%
! CTGTCTGAGGGTGTGAGTTC+GGG + chr7.4:15382074-15382093 MS.gene055975:CDS 55.0%
! GAGCGTAACGGAGGGAGTTT+CGG - chr7.4:15381323-15381342 None:intergenic 55.0%
! GCTGTCTGAGGGTGTGAGTT+CGG + chr7.4:15382073-15382092 MS.gene055975:CDS 55.0%
! TGTCTGAGGGTGTGAGTTCG+GGG + chr7.4:15382075-15382094 MS.gene055975:CDS 55.0%
! TTTGCTGTGAGGACCGTGGT+TGG + chr7.4:15382501-15382520 MS.gene055975:CDS 55.0%
!! GAGGCGCTGCCAAGTTCTTT+GGG + chr7.4:15383135-15383154 MS.gene055975:CDS 55.0%
!! GATTTTGGGAGAGGAGGTGG+TGG - chr7.4:15381257-15381276 None:intergenic 55.0%
!! GCGCAGAGGATTTTGAGGAC+TGG + chr7.4:15382455-15382474 MS.gene055975:CDS 55.0%
!! GGAGATTTTGGGAGAGGAGG+TGG - chr7.4:15381260-15381279 None:intergenic 55.0%
!! GGTGATGGAGGGGGTTAAGT+GGG - chr7.4:15381361-15381380 None:intergenic 55.0%
!! TGAGGCGCTGCCAAGTTCTT+TGG + chr7.4:15383134-15383153 MS.gene055975:CDS 55.0%
!!! ACGCGGTGGTTTTGGTTACG+GGG + chr7.4:15382562-15382581 MS.gene055975:CDS 55.0%
!!! GACGCGGTGGTTTTGGTTAC+GGG + chr7.4:15382561-15382580 MS.gene055975:CDS 55.0%
!!! GGTTTTAAGAGGTGGGGCGA+TGG + chr7.4:15382187-15382206 MS.gene055975:CDS 55.0%
!!! GTGGGTTTTGGAAGGGGAGT+TGG + chr7.4:15382316-15382335 MS.gene055975:CDS 55.0%
ACAGGGGCAATGGCAAGACG+CGG + chr7.4:15382545-15382564 MS.gene055975:CDS 60.0%
CTGGTCTCGAGAGGACAGTG+AGG - chr7.4:15383541-15383560 None:intergenic 60.0%
GAATGCGGTGAGCGTAACGG+AGG - chr7.4:15381332-15381351 None:intergenic 60.0%
GATGGAGGGGGTTAAGTGGG+AGG - chr7.4:15381358-15381377 None:intergenic 60.0%
GTCAGCGAAGGAGAGGGCTT+CGG - chr7.4:15381445-15381464 None:intergenic 60.0%
TTAAGAGGTGGGGCGATGGC+GGG + chr7.4:15382191-15382210 MS.gene055975:CDS 60.0%
!! CGTGTTTGCTGTGAGGACCG+TGG + chr7.4:15382497-15382516 MS.gene055975:CDS 60.0%
!! GGAGAGGAGGTGGTGGACTA+GGG - chr7.4:15381250-15381269 None:intergenic 60.0%
!! GGGGGAGATTTTGGGAGAGG+AGG - chr7.4:15381263-15381282 None:intergenic 60.0%
!! GGGTGATGGAGGGGGTTAAG+TGG - chr7.4:15381362-15381381 None:intergenic 60.0%
!! GGTTTGGCTTGCTGAGCCGA+TGG + chr7.4:15382124-15382143 MS.gene055975:CDS 60.0%
AAACGCCGTCTCGCCACCGA+TGG + chr7.4:15381411-15381430 MS.gene055975:CDS 65.0%
AGCGAAGGAGAGGGCTTCGG+AGG - chr7.4:15381442-15381461 None:intergenic 65.0%
AGCGACCATCGGTGGCGAGA+CGG - chr7.4:15381419-15381438 None:intergenic 65.0%
GGATGTTGGGACGGTTGGGC+AGG + chr7.4:15381962-15381981 MS.gene055975:CDS 65.0%
GGCTTCGGAGGAGCGACCAT+CGG - chr7.4:15381430-15381449 None:intergenic 65.0%
GGTGGCGAGACGGCGTTTGA+TGG - chr7.4:15381409-15381428 None:intergenic 65.0%
TCGCAGCACGAGCCCAACCA+CGG - chr7.4:15382517-15382536 None:intergenic 65.0%
TTCGGAGGAGCGACCATCGG+TGG - chr7.4:15381427-15381446 None:intergenic 65.0%
!! GGGAGAGGAGGTGGTGGACT+AGG - chr7.4:15381251-15381270 None:intergenic 65.0%
GATGGAATCGGCGACGGCGG+CGG - chr7.4:15381391-15381410 None:intergenic 70.0%
GGGGCAATGGCAAGACGCGG+TGG + chr7.4:15382548-15382567 MS.gene055975:CDS 70.0%
!! CGGAGTCGGGGGTGATGGAG+GGG - chr7.4:15381371-15381390 None:intergenic 70.0%
!! GCGGAGTCGGGGGTGATGGA+GGG - chr7.4:15381372-15381391 None:intergenic 70.0%
!! GGAGTCGGGGGTGATGGAGG+GGG - chr7.4:15381370-15381389 None:intergenic 70.0%
ATCGGCGACGGCGGCGGAGT+CGG - chr7.4:15381385-15381404 None:intergenic 75.0%
! GGCGGAGTCGGGGGTGATGG+AGG - chr7.4:15381373-15381392 None:intergenic 75.0%
! GGCGGCGGAGTCGGGGGTGA+TGG - chr7.4:15381376-15381395 None:intergenic 80.0%
! TCGGCGACGGCGGCGGAGTC+GGG - chr7.4:15381384-15381403 None:intergenic 80.0%
! CGGCGACGGCGGCGGAGTCG+GGG - chr7.4:15381383-15381402 None:intergenic 85.0%
! GGCGACGGCGGCGGAGTCGG+GGG - chr7.4:15381382-15381401 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 15381201 15383815 15381201 ID=MS.gene055975
chr7.4 mRNA 15381201 15383815 15381201 ID=MS.gene055975.t1;Parent=MS.gene055975
chr7.4 exon 15381201 15383437 15381201 ID=MS.gene055975.t1.exon1;Parent=MS.gene055975.t1
chr7.4 CDS 15381201 15383437 15381201 ID=cds.MS.gene055975.t1;Parent=MS.gene055975.t1
chr7.4 exon 15383527 15383815 15383527 ID=MS.gene055975.t1.exon2;Parent=MS.gene055975.t1
chr7.4 CDS 15383527 15383815 15383527 ID=cds.MS.gene055975.t1;Parent=MS.gene055975.t1
Gene Sequence

>MS.gene055975

ATGGACGACGAAGAAGAACAACAAAAACTCCCAGATCTAGTAAAAGCCCTAGTCCACCACCTCCTCTCCCAAAATCTCCCCCAAAATTCCCAACCCATAAACCCTAACTCCCCTCAATTCCGAAACTCCCTCCGTTACGCTCACCGCATTCTCTCCTCCCACTTAACCCCCTCCATCACCCCCGACTCCGCCGCCGTCGCCGATTCCATCAAACGCCGTCTCGCCACCGATGGTCGCTCCTCCGAAGCCCTCTCCTTCGCTGACCTTTACGCCAAATTCTCCACCAAAGCCACTCATATCGATAATAAGTGGGCCCTACTTCATCTCTTCAATATCATCTCTCAAGATCGTAAATCCGCTGCTAAATCGAATGACCCTTTCGTTCTTCTTCCCAATTTAACCATTTCGGAGAATAACGTTCAAAGACGCGGTGAAAATAATGGATTTAATGATGGTGTTGTCATTCTTGCGAGGGATCCGAAGAATCGACGAGAAATCGCGTTTAATGAGTATGTGAAATTGATGAAGGAAGAGAATGATGTGACTGAGGAAGCTATGGTGACTGATGTGATTTATGCTTGTCAAGGTGTGGATGGGAAATATGTGAAATTTGATGAAGAGAGTGATGGTTATGTTTTATTGGATTCAATTAGGGTTTCTAGGGCTAGTAGTAGTATGGTTTATAAGCTTTGTGAATTAGGGGTATTATTTAAGAGGGTTGTTGGGTTTATTGAGATGAGTTTGGGTAGGTCTCCGGTAGAGGATGTTGGGACGGTTGGGCAGGCTTTTTGTGCTGCATTGCAGGATGAGTTGAGTGATTATTATAAGTTGTTGGCTGTGCTTGAGGCTCAGAGTTCGAATCCGATTCCGTTGCTGTCTGAGGGTGTGAGTTCGGGGAATTATTTATCGTTGAGGAGATTAGCGGTTTGGCTTGCTGAGCCGATGGTGAAGATGAGGTTGATGGCAGATTTGGTTGAGAAGTGTAGGGTTTTAAGAGGTGGGGCGATGGCGGGTGCGATTCATTTACATGCTAGACATGGGGATCCGATGGTTCATGAGTTTATGAAGAGGTTGCTTCAGCGTGTGTGTTCTCCGCTTTTTGAAATGGTGAAGAGGTGGGTTTTGGAAGGGGAGTTGGAAGATATTTTTGTTGAGTTTTTCATTGTTGGGCAGCCTGTGAAAGCTGAATCGCTTTGGAGAGAGGGATATAGGCTCTATGATGCTATGCTTCCTTCTTTTATTTCGGCTTCTCTTGCGCAGAGGATTTTGAGGACTGGAAAGTCCATAAATTTTCTCCGTGTTTGCTGTGAGGACCGTGGTTGGGCTCGTGCTGCGACTGAAGATACAGGGGCAATGGCAAGACGCGGTGGTTTTGGTTACGGGGAAACTGATACCCTTGAGTCATTGGTTGATGAAGCTTCAAAAAGAATTGATAAGCATCTATTGGATGTAATTTATGAGAGGTATAAATTCAAAGAGCACTGTCTTGCGATTAAGCGGTATTTGTTGCTTGGCCAAGGTGATTTTGTGCAATATCTAATGGATATTGTTGGGCCTGAACTTTCTGTGCCCGCAAACACAATAAGCTCTTTCAAACTTGCAGGTTTGCTGGAAACAGCAATTCGGGCGTCAAATGCTCAGTATGATGACCCTGATATTTTGGATAGGCTCAGGGTCAAAATGATGCCACATGAAAGCGGTGATAGGGGCTGGGATGTATTCTCACTGGAATATGATGCAAGAGTTCCACTAGATACTGTGTTCACAGAGTCTGTGATGACGAGGTATTTAAGAATTTTTAATTTTCTATGGAAGCTTAAGAGAGTGGAACATGCACTTATTGGTGCCTGGAAGACCATGAAACCAAATTGCATAACTTCTAATACCTTTAATAGATTGCAACATGCTGTAAAGATGCAGCTAGTTTCAGCATTGAGGCGCTGCCAAGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACTTGCAATATTATATAATGTTTGAGGTCTTGGAAATATCATGGTCAAACTTTTTAAGTGAGATGGAAGTAGCCAAGGATCTTGATGATCTACTTGCAGCTCACGAGAAATATATGAATTCAATTGTAGAGAAATCTCTCCTTGGAGAACTCTCTCAGTCCCTTTACAAGTCACTAATAGTAATATTTGATCTTATATTACGTTTTCGGAGCCATGCGGATATTTTATACGAAGGCATTCATGAGTTGCAAGCAAGGTATTGATCTTACTTTTCTTCTTTACTGCTTCCTCAATTTCTTCTCCCCATATTGCCATGTTTGACATTTGATCATCTGTTTGTTTCAGAATCACAGAGTCCTCACTGTCCTCTCGAGACCAGAAGAAAACACGGAAGCGATTGACTGATAAGTCATCGGAAGAAGAATCCTGGATTGCTGATGGGAGAAAAGCCTTAACAAAACGCGCTGGTGAATTTCTCCAAAAAATGGAACAAGATCTGGATGCAATATCTAAGGAGTATTCATCATTGCAAGAGGATTTCATTTCTCAGTTGCCTGTGCAGCAGCATGTTGATCTAAAGTTTCTCTTTTTCCGTCTCGATTTCAATGAATTTTATAGGCGGGTTGTGTCGTAG

Protein sequence

>MS.gene055975.t1

MDDEEEQQKLPDLVKALVHHLLSQNLPQNSQPINPNSPQFRNSLRYAHRILSSHLTPSITPDSAAVADSIKRRLATDGRSSEALSFADLYAKFSTKATHIDNKWALLHLFNIISQDRKSAAKSNDPFVLLPNLTISENNVQRRGENNGFNDGVVILARDPKNRREIAFNEYVKLMKEENDVTEEAMVTDVIYACQGVDGKYVKFDEESDGYVLLDSIRVSRASSSMVYKLCELGVLFKRVVGFIEMSLGRSPVEDVGTVGQAFCAALQDELSDYYKLLAVLEAQSSNPIPLLSEGVSSGNYLSLRRLAVWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHARHGDPMVHEFMKRLLQRVCSPLFEMVKRWVLEGELEDIFVEFFIVGQPVKAESLWREGYRLYDAMLPSFISASLAQRILRTGKSINFLRVCCEDRGWARAATEDTGAMARRGGFGYGETDTLESLVDEASKRIDKHLLDVIYERYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSVPANTISSFKLAGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMTRYLRIFNFLWKLKRVEHALIGAWKTMKPNCITSNTFNRLQHAVKMQLVSALRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLSEMEVAKDLDDLLAAHEKYMNSIVEKSLLGELSQSLYKSLIVIFDLILRFRSHADILYEGIHELQARITESSLSSRDQKKTRKRLTDKSSEEESWIADGRKALTKRAGEFLQKMEQDLDAISKEYSSLQEDFISQLPVQQHVDLKFLFFRLDFNEFYRRVVS