Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37836.t1 | XP_003617079.1 | 97.2 | 389 | 11 | 0 | 1 | 389 | 3 | 391 | 5.60E-221 | 776.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37836.t1 | Q9FH04 | 72.0 | 375 | 104 | 1 | 14 | 387 | 15 | 389 | 7.8e-163 | 574.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37836.t1 | G7K2X3 | 97.2 | 389 | 11 | 0 | 1 | 389 | 3 | 391 | 4.0e-221 | 776.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051171 | MS.gene37836 | 0.81655 | 5.22E-52 | -1.69E-46 |
| MS.gene051242 | MS.gene37836 | 0.813573 | 2.39E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene37836 | 0.82062 | 6.23E-53 | -1.69E-46 |
| MS.gene056305 | MS.gene37836 | 0.848076 | 7.71E-60 | -1.69E-46 |
| MS.gene056633 | MS.gene37836 | 0.8475 | 1.11E-59 | -1.69E-46 |
| MS.gene056664 | MS.gene37836 | 0.804563 | 2.03E-49 | -1.69E-46 |
| MS.gene058746 | MS.gene37836 | 0.838136 | 3.44E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069804 | MS.gene37836 | PPI |
| MS.gene030545 | MS.gene37836 | PPI |
| MS.gene37836 | MS.gene79768 | PPI |
| MS.gene37836 | MS.gene83309 | PPI |
| MS.gene49741 | MS.gene37836 | PPI |
| MS.gene73688 | MS.gene37836 | PPI |
| MS.gene37836 | MS.gene70145 | PPI |
| MS.gene37836 | MS.gene042841 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37836.t1 | MTR_5g087710 | 97.172 | 389 | 11 | 0 | 1 | 389 | 3 | 391 | 0.0 | 773 |
| MS.gene37836.t1 | MTR_3g079180 | 75.584 | 385 | 93 | 1 | 6 | 389 | 2 | 386 | 0.0 | 616 |
| MS.gene37836.t1 | MTR_3g099460 | 61.905 | 378 | 140 | 3 | 14 | 388 | 14 | 390 | 4.42e-165 | 468 |
| MS.gene37836.t1 | MTR_3g099460 | 60.847 | 378 | 137 | 4 | 14 | 388 | 14 | 383 | 1.73e-158 | 451 |
| MS.gene37836.t1 | MTR_3g079170 | 76.753 | 271 | 49 | 1 | 109 | 379 | 26 | 282 | 3.96e-153 | 433 |
| MS.gene37836.t1 | MTR_3g099460 | 61.920 | 323 | 121 | 2 | 67 | 388 | 6 | 327 | 1.69e-137 | 395 |
| MS.gene37836.t1 | MTR_1g069430 | 51.070 | 374 | 181 | 2 | 14 | 387 | 6 | 377 | 9.07e-134 | 388 |
| MS.gene37836.t1 | MTR_6g068930 | 50.262 | 382 | 184 | 4 | 8 | 389 | 2 | 377 | 3.58e-130 | 379 |
| MS.gene37836.t1 | MTR_7g099040 | 49.206 | 378 | 190 | 2 | 8 | 385 | 2 | 377 | 1.55e-127 | 372 |
| MS.gene37836.t1 | MTR_3g089940 | 45.812 | 382 | 203 | 4 | 9 | 389 | 2 | 380 | 1.65e-122 | 359 |
| MS.gene37836.t1 | MTR_3g089940 | 45.889 | 377 | 200 | 4 | 14 | 389 | 7 | 380 | 8.09e-122 | 357 |
| MS.gene37836.t1 | MTR_3g089977 | 46.133 | 375 | 198 | 4 | 14 | 387 | 7 | 378 | 1.54e-121 | 357 |
| MS.gene37836.t1 | MTR_3g089970 | 45.889 | 377 | 200 | 4 | 14 | 389 | 8 | 381 | 8.40e-121 | 355 |
| MS.gene37836.t1 | MTR_7g068330 | 47.927 | 386 | 193 | 5 | 8 | 387 | 2 | 385 | 1.20e-119 | 352 |
| MS.gene37836.t1 | MTR_3g099460 | 62.238 | 286 | 105 | 2 | 14 | 296 | 14 | 299 | 4.97e-118 | 346 |
| MS.gene37836.t1 | MTR_7g068320 | 47.884 | 378 | 191 | 5 | 14 | 387 | 18 | 393 | 6.09e-117 | 345 |
| MS.gene37836.t1 | MTR_3g099460 | 60.839 | 286 | 102 | 3 | 14 | 296 | 14 | 292 | 2.15e-111 | 329 |
| MS.gene37836.t1 | MTR_3g089940 | 45.322 | 342 | 183 | 4 | 9 | 349 | 2 | 340 | 7.00e-105 | 313 |
| MS.gene37836.t1 | MTR_3g089940 | 45.401 | 337 | 180 | 4 | 14 | 349 | 7 | 340 | 2.42e-104 | 312 |
| MS.gene37836.t1 | MTR_5g045710 | 44.211 | 380 | 203 | 7 | 10 | 387 | 2 | 374 | 3.86e-104 | 312 |
| MS.gene37836.t1 | MTR_0001s0660 | 44.032 | 377 | 203 | 5 | 10 | 385 | 2 | 371 | 1.22e-103 | 314 |
| MS.gene37836.t1 | MTR_5g045710 | 43.197 | 294 | 161 | 5 | 95 | 387 | 3 | 291 | 3.56e-76 | 238 |
| MS.gene37836.t1 | MTR_8g095220 | 31.234 | 381 | 243 | 12 | 15 | 385 | 51 | 422 | 5.95e-39 | 144 |
| MS.gene37836.t1 | MTR_8g095220 | 33.603 | 247 | 153 | 6 | 15 | 253 | 51 | 294 | 6.65e-28 | 112 |
| MS.gene37836.t1 | MTR_6g465010 | 25.507 | 345 | 218 | 11 | 42 | 378 | 23 | 336 | 4.33e-22 | 96.7 |
| MS.gene37836.t1 | MTR_6g466320 | 25.507 | 345 | 218 | 11 | 42 | 378 | 39 | 352 | 5.79e-22 | 96.3 |
| MS.gene37836.t1 | MTR_6g465010 | 25.507 | 345 | 218 | 11 | 42 | 378 | 39 | 352 | 5.79e-22 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37836.t1 | AT5G42250 | 69.923 | 389 | 115 | 2 | 1 | 387 | 1 | 389 | 0.0 | 574 |
| MS.gene37836.t1 | AT1G22430 | 59.640 | 389 | 153 | 4 | 3 | 389 | 2 | 388 | 1.43e-170 | 482 |
| MS.gene37836.t1 | AT1G22430 | 59.640 | 389 | 153 | 4 | 3 | 389 | 2 | 388 | 1.43e-170 | 482 |
| MS.gene37836.t1 | AT4G22110 | 60.614 | 391 | 150 | 4 | 1 | 389 | 1 | 389 | 1.17e-169 | 479 |
| MS.gene37836.t1 | AT4G22110 | 60.614 | 391 | 150 | 4 | 1 | 389 | 1 | 389 | 1.17e-169 | 479 |
| MS.gene37836.t1 | AT1G22440 | 60.519 | 385 | 148 | 4 | 7 | 389 | 4 | 386 | 3.37e-168 | 476 |
| MS.gene37836.t1 | AT5G43940 | 51.075 | 372 | 180 | 2 | 14 | 385 | 6 | 375 | 5.07e-136 | 394 |
| MS.gene37836.t1 | AT5G43940 | 50.546 | 366 | 179 | 2 | 20 | 385 | 24 | 387 | 3.78e-132 | 384 |
| MS.gene37836.t1 | AT5G24760 | 50.000 | 386 | 185 | 5 | 6 | 389 | 2 | 381 | 4.09e-132 | 384 |
| MS.gene37836.t1 | AT1G22430 | 58.675 | 317 | 122 | 5 | 3 | 316 | 2 | 312 | 3.38e-127 | 369 |
| MS.gene37836.t1 | AT1G64710 | 48.800 | 375 | 187 | 5 | 16 | 387 | 8 | 380 | 1.00e-124 | 365 |
| MS.gene37836.t1 | AT1G77120 | 47.594 | 374 | 194 | 2 | 14 | 387 | 6 | 377 | 1.04e-124 | 365 |
| MS.gene37836.t1 | AT5G24760 | 50.279 | 358 | 172 | 4 | 32 | 389 | 1 | 352 | 1.30e-123 | 361 |
| MS.gene37836.t1 | AT5G24760 | 50.279 | 358 | 172 | 4 | 32 | 389 | 1 | 352 | 1.30e-123 | 361 |
| MS.gene37836.t1 | AT1G32780 | 48.438 | 384 | 186 | 6 | 16 | 389 | 9 | 390 | 1.94e-118 | 349 |
| MS.gene37836.t1 | AT1G64710 | 48.189 | 359 | 181 | 5 | 32 | 387 | 1 | 357 | 4.39e-118 | 347 |
| MS.gene37836.t1 | AT1G22430 | 58.889 | 270 | 108 | 3 | 3 | 270 | 2 | 270 | 1.01e-111 | 328 |
| MS.gene37836.t1 | AT1G22430 | 58.889 | 270 | 108 | 3 | 3 | 270 | 2 | 270 | 1.01e-111 | 328 |
| MS.gene37836.t1 | AT4G22110 | 61.798 | 267 | 99 | 3 | 1 | 265 | 1 | 266 | 2.63e-111 | 327 |
| MS.gene37836.t1 | AT1G64710 | 47.727 | 308 | 157 | 4 | 82 | 387 | 6 | 311 | 9.83e-99 | 296 |
| MS.gene37836.t1 | AT5G24760 | 49.630 | 270 | 133 | 3 | 120 | 389 | 1 | 267 | 3.10e-87 | 265 |
| MS.gene37836.t1 | AT5G63620 | 28.533 | 368 | 249 | 8 | 19 | 379 | 57 | 417 | 1.72e-38 | 143 |
| MS.gene37836.t1 | AT5G63620 | 28.533 | 368 | 249 | 8 | 19 | 379 | 57 | 417 | 3.15e-38 | 142 |
| MS.gene37836.t1 | AT5G63620 | 29.461 | 241 | 163 | 3 | 19 | 253 | 57 | 296 | 1.36e-26 | 108 |
| MS.gene37836.t1 | AT5G51970 | 24.930 | 357 | 218 | 12 | 36 | 378 | 34 | 354 | 2.51e-20 | 91.7 |
| MS.gene37836.t1 | AT5G51970 | 24.930 | 357 | 218 | 12 | 36 | 378 | 34 | 354 | 2.51e-20 | 91.7 |
| MS.gene37836.t1 | AT4G37990 | 23.565 | 331 | 212 | 9 | 44 | 364 | 35 | 334 | 5.76e-11 | 63.9 |
| MS.gene37836.t1 | AT4G37970 | 28.571 | 147 | 88 | 3 | 44 | 188 | 40 | 171 | 8.43e-11 | 62.4 |
| MS.gene37836.t1 | AT4G37970 | 28.571 | 147 | 88 | 3 | 44 | 188 | 40 | 171 | 9.26e-11 | 62.4 |
Find 79 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACACACCTTTACATCTTA+TGG | 0.160696 | 5.3:+70462260 | None:intergenic |
| TATTTATCAGGAACTCAATT+TGG | 0.180490 | 5.3:-70459247 | MS.gene37836:intron |
| ACTCTTATGGGGTCTATATT+TGG | 0.200744 | 5.3:-70459466 | MS.gene37836:CDS |
| TGTGGAGCAACTAGGATTAT+AGG | 0.276027 | 5.3:-70460272 | MS.gene37836:CDS |
| CTTTATTCAGCGAAGAAGTT+TGG | 0.298247 | 5.3:-70460097 | MS.gene37836:intron |
| CACACACCTTTACATCTTAT+GGG | 0.302890 | 5.3:+70462261 | None:intergenic |
| ACTAGATTCACTGATCTAAA+TGG | 0.304247 | 5.3:-70460980 | MS.gene37836:CDS |
| CTTTGTAAATCCTGGAGAAT+TGG | 0.307283 | 5.3:-70460065 | MS.gene37836:CDS |
| TAAGAGTCTTCCCTTGAAAA+AGG | 0.321797 | 5.3:+70459482 | None:intergenic |
| CCATCACTTGTTGCTGCAGC+AGG | 0.349672 | 5.3:+70462291 | None:intergenic |
| TTTCAAGGGAAGACTCTTAT+GGG | 0.369580 | 5.3:-70459478 | MS.gene37836:CDS |
| ATCCAACAATTCCTCCCAAC+AGG | 0.379793 | 5.3:-70460877 | MS.gene37836:CDS |
| CTTTACATCTTATGGGTTGT+TGG | 0.379879 | 5.3:+70462268 | None:intergenic |
| CATAGTTATCCCAATCTTCA+TGG | 0.380845 | 5.3:-70461101 | MS.gene37836:CDS |
| AGTGTCTTCGGTGTGTGATT+TGG | 0.391376 | 5.3:-70459155 | MS.gene37836:CDS |
| GCCCTGTTGGGAGGAATTGT+TGG | 0.392172 | 5.3:+70460875 | None:intergenic |
| CTCAGTTGTGGTGTATCAAC+AGG | 0.395594 | 5.3:-70460845 | MS.gene37836:intron |
| TCACAATCAGCCATGAAGAT+TGG | 0.401526 | 5.3:+70461091 | None:intergenic |
| GAAAACAGCAAATGTTGAAC+CGG | 0.406203 | 5.3:-70460717 | MS.gene37836:CDS |
| TGGATCAATCTTGAGTAGAT+TGG | 0.410420 | 5.3:+70460895 | None:intergenic |
| CACAATCAGCCATGAAGATT+GGG | 0.418681 | 5.3:+70461092 | None:intergenic |
| TACTGGGTCATGAGGCAATT+GGG | 0.421956 | 5.3:-70461690 | MS.gene37836:intron |
| GCTGAAGGAGCTAGACTTTG+TGG | 0.441563 | 5.3:-70460290 | MS.gene37836:CDS |
| GTCACAGACTTTGTAAATCC+TGG | 0.452717 | 5.3:-70460073 | MS.gene37836:CDS |
| GGAAAACAAATCTGTGAGTC+AGG | 0.454117 | 5.3:-70460044 | MS.gene37836:CDS |
| ATCCAAGGTTTAATATCAAA+AGG | 0.456805 | 5.3:+70461019 | None:intergenic |
| AACTAGAGACAAATATGAAA+TGG | 0.460302 | 5.3:+70460945 | None:intergenic |
| CTGAGGAGGCATGCCCTGTT+GGG | 0.462513 | 5.3:+70460863 | None:intergenic |
| GCCTCATGACCCAGTATCCT+TGG | 0.463153 | 5.3:+70461697 | None:intergenic |
| TGCAGCAGGTTTATCTTCCA+TGG | 0.473298 | 5.3:+70462305 | None:intergenic |
| TCAATAATCAGTGGCTCACC+TGG | 0.476109 | 5.3:+70461978 | None:intergenic |
| TGACAAAAGGAGAGTGTCTT+CGG | 0.477160 | 5.3:-70459167 | MS.gene37836:CDS |
| ATGTGTTGGTATGGCATCAT+TGG | 0.482347 | 5.3:-70459978 | MS.gene37836:CDS |
| GATTATTGAGGAGATCTTTG+TGG | 0.489087 | 5.3:-70461964 | MS.gene37836:CDS |
| CTAGACTTTGTGGAGCAACT+AGG | 0.495288 | 5.3:-70460280 | MS.gene37836:CDS |
| TTGATACTCAACTTAGATCC+TGG | 0.495669 | 5.3:+70459517 | None:intergenic |
| CTAGCTTCATGTGGCATTGG+TGG | 0.495830 | 5.3:+70461939 | None:intergenic |
| TTGCTTTGAATGTGTTGGTA+TGG | 0.503086 | 5.3:-70459987 | MS.gene37836:CDS |
| ACTGAGGAGGCATGCCCTGT+TGG | 0.511132 | 5.3:+70460862 | None:intergenic |
| AAGAATGGGTACATCAGACT+TGG | 0.513039 | 5.3:+70459432 | None:intergenic |
| CTTATGGGGTCTATATTTGG+AGG | 0.514741 | 5.3:-70459463 | MS.gene37836:CDS |
| CAACAACCCATAAGATGTAA+AGG | 0.516393 | 5.3:-70462267 | MS.gene37836:intron |
| AGCATATGCTTCATGTAGAA+AGG | 0.522535 | 5.3:-70459948 | MS.gene37836:intron |
| GAAGTAACAGAAGTTACAAA+GGG | 0.527117 | 5.3:-70461127 | MS.gene37836:CDS |
| ATCCTAGCTTCATGTGGCAT+TGG | 0.528211 | 5.3:+70461936 | None:intergenic |
| ATACTGGGTCATGAGGCAAT+TGG | 0.530290 | 5.3:-70461691 | MS.gene37836:CDS |
| GATTATTGCTTTGAATGTGT+TGG | 0.539967 | 5.3:-70459992 | MS.gene37836:CDS |
| GGAAGTAACAGAAGTTACAA+AGG | 0.541099 | 5.3:-70461128 | MS.gene37836:CDS |
| AGGGCATGCCTCCTCAGTTG+TGG | 0.551435 | 5.3:-70460857 | MS.gene37836:CDS |
| ATGTTAGGAGTGGACAAGCC+AGG | 0.552820 | 5.3:-70459535 | MS.gene37836:CDS |
| ATTGTTTCCTAGGTGGCTGA+AGG | 0.554628 | 5.3:-70460305 | MS.gene37836:intron |
| ACTCGGATGTATTGGATTAG+CGG | 0.554730 | 5.3:-70460672 | MS.gene37836:intron |
| TCCAAGGATACTGGGTCATG+AGG | 0.566290 | 5.3:-70461698 | MS.gene37836:CDS |
| GTTATCATAGAGATGACTGA+TGG | 0.568363 | 5.3:-70460022 | MS.gene37836:CDS |
| GCTGCGGTTTGTCGCAAACC+AGG | 0.570156 | 5.3:-70461996 | MS.gene37836:CDS |
| CACCAATGCCACATGAAGCT+AGG | 0.581082 | 5.3:-70461938 | MS.gene37836:CDS |
| TCTTCGGTGTGTGATTTGGA+TGG | 0.582969 | 5.3:-70459151 | MS.gene37836:CDS |
| AAAACAGCAAATGTTGAACC+GGG | 0.583487 | 5.3:-70460716 | MS.gene37836:CDS |
| CCTGCTGCAGCAACAAGTGA+TGG | 0.586016 | 5.3:-70462291 | MS.gene37836:CDS |
| AGGAGGCATGCCCTGTTGGG+AGG | 0.588882 | 5.3:+70460866 | None:intergenic |
| CAAAAGGAAACTTTGAACAA+AGG | 0.590036 | 5.3:+70461035 | None:intergenic |
| TCTTAGGGGTAGGTGCTGCA+TGG | 0.593039 | 5.3:-70460739 | MS.gene37836:intron |
| AGAATGGGTACATCAGACTT+GGG | 0.595366 | 5.3:+70459433 | None:intergenic |
| AGCAACTAGGATTATAGGTG+TGG | 0.598387 | 5.3:-70460267 | MS.gene37836:CDS |
| TCCAGGGTTGTGGAAAGTGT+TGG | 0.599735 | 5.3:-70461154 | MS.gene37836:intron |
| GATATCACTGTGACAAAGAG+AGG | 0.603012 | 5.3:+70461899 | None:intergenic |
| AGGTGAGCCACTGATTATTG+AGG | 0.608296 | 5.3:-70461976 | MS.gene37836:CDS |
| TTCAAGGGAAGACTCTTATG+GGG | 0.612341 | 5.3:-70459477 | MS.gene37836:CDS |
| GGTTGTGGAAAGTGTTGGAG+AGG | 0.628245 | 5.3:-70461149 | MS.gene37836:CDS |
| AAAATAGCTACTGTCGACCC+CGG | 0.636859 | 5.3:+70460698 | None:intergenic |
| TCCAACAATTCCTCCCAACA+GGG | 0.637346 | 5.3:-70460876 | MS.gene37836:CDS |
| ATCATAGAGATGACTGATGG+AGG | 0.637658 | 5.3:-70460019 | MS.gene37836:CDS |
| AAGATCTCCTCAATAATCAG+TGG | 0.639801 | 5.3:+70461969 | None:intergenic |
| TTGATACACCACAACTGAGG+AGG | 0.646650 | 5.3:+70460849 | None:intergenic |
| ATTTAGATCAGTGAATCTAG+TGG | 0.650022 | 5.3:+70460982 | None:intergenic |
| GTATCATATCTAAGCATCCA+AGG | 0.653021 | 5.3:+70461004 | None:intergenic |
| ATACGAATCCTAGCTTCATG+TGG | 0.667924 | 5.3:+70461930 | None:intergenic |
| CTGTTGATACACCACAACTG+AGG | 0.718420 | 5.3:+70460846 | None:intergenic |
| AAACAGCAAATGTTGAACCG+GGG | 0.725303 | 5.3:-70460715 | MS.gene37836:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAGATAAAATATAAT+TGG | + | chr5.3:70461000-70461019 | None:intergenic | 10.0% |
| !! | TATTATCAAATTAAATTGAA+TGG | + | chr5.3:70459316-70459335 | None:intergenic | 10.0% |
| !!! | CTAATTTTTTAACTTTTTTT+TGG | - | chr5.3:70459967-70459986 | MS.gene37836:CDS | 10.0% |
| !!! | TGAAACTATTTTTTTTTTTT+TGG | - | chr5.3:70459358-70459377 | MS.gene37836:intron | 10.0% |
| !!! | TTTTTTTTTTTTACTTTTGA+AGG | - | chr5.3:70459709-70459728 | MS.gene37836:intron | 10.0% |
| !! | ATACAAATTAATAAAATGCA+TGG | + | chr5.3:70459791-70459810 | None:intergenic | 15.0% |
| !!! | ATGTAATAGTTTTTTTTTGA+AGG | - | chr5.3:70459268-70459287 | MS.gene37836:intron | 15.0% |
| !! | TTATCAAACATCAATTCTTA+GGG | - | chr5.3:70460692-70460711 | MS.gene37836:CDS | 20.0% |
| !! | TTTATCAAACATCAATTCTT+AGG | - | chr5.3:70460691-70460710 | MS.gene37836:CDS | 20.0% |
| !!! | AATTAATTTTTATGTGATCC+AGG | - | chr5.3:70460275-70460294 | MS.gene37836:CDS | 20.0% |
| !!! | ATTAATTTTTATGTGATCCA+GGG | - | chr5.3:70460276-70460295 | MS.gene37836:CDS | 20.0% |
| !!! | CTTTATTTTAACCATGTTAT+TGG | - | chr5.3:70461574-70461593 | MS.gene37836:intron | 20.0% |
| !!! | TAGTAATGTCAACAATTTTT+AGG | - | chr5.3:70462159-70462178 | MS.gene37836:intron | 20.0% |
| !!! | TTACCAATTTCAAATTTTTC+TGG | + | chr5.3:70461213-70461232 | None:intergenic | 20.0% |
| !!! | TTTTTCTCCAATTATTTATC+AGG | - | chr5.3:70462187-70462206 | MS.gene37836:intron | 20.0% |
| ! | AAAAACAATTATGTTAGGAG+TGG | - | chr5.3:70461901-70461920 | MS.gene37836:CDS | 25.0% |
| ! | AACTAGAGACAAATATGAAA+TGG | + | chr5.3:70460504-70460523 | None:intergenic | 25.0% |
| ! | ATCCAAGGTTTAATATCAAA+AGG | + | chr5.3:70460430-70460449 | None:intergenic | 25.0% |
| ! | ATGTAGCGTTTAAAAAGAAT+GGG | + | chr5.3:70462031-70462050 | None:intergenic | 25.0% |
| ! | ATTGTGGATGAAAAAAAATG+TGG | + | chr5.3:70461690-70461709 | None:intergenic | 25.0% |
| ! | TATAAAATGTTCGCAAAAGA+GGG | + | chr5.3:70462108-70462127 | None:intergenic | 25.0% |
| ! | TATCAAACATCAATTCTTAG+GGG | - | chr5.3:70460693-70460712 | MS.gene37836:CDS | 25.0% |
| ! | TATTTATCAGGAACTCAATT+TGG | - | chr5.3:70462199-70462218 | MS.gene37836:intron | 25.0% |
| ! | TCATTTCCTAATTCCTAATT+AGG | - | chr5.3:70459838-70459857 | MS.gene37836:intron | 25.0% |
| ! | TGTAATGTGTATAATGTACT+TGG | - | chr5.3:70460122-70460141 | MS.gene37836:intron | 25.0% |
| ! | TTATAAAATGTTCGCAAAAG+AGG | + | chr5.3:70462109-70462128 | None:intergenic | 25.0% |
| ! | TTGAGTTCCTGATAAATAAT+TGG | + | chr5.3:70462197-70462216 | None:intergenic | 25.0% |
| ! | TTGTAATTGAATTGTTTCCT+AGG | - | chr5.3:70461131-70461150 | MS.gene37836:CDS | 25.0% |
| ! | TTTAGCATACAAAACTACAA+AGG | + | chr5.3:70461104-70461123 | None:intergenic | 25.0% |
| !! | AAGCCAGAAAAATTTGAAAT+TGG | - | chr5.3:70461207-70461226 | MS.gene37836:intron | 25.0% |
| !! | ATGTTTTCGTTTTGTAGTTT+GGG | - | chr5.3:70460816-70460835 | MS.gene37836:intron | 25.0% |
| !! | ATTTAGTTCGGATTGTTAAA+CGG | + | chr5.3:70460187-70460206 | None:intergenic | 25.0% |
| !! | TATGTTTTCGTTTTGTAGTT+TGG | - | chr5.3:70460815-70460834 | MS.gene37836:intron | 25.0% |
| !! | TTCCTTTTGATATTAAACCT+TGG | - | chr5.3:70460425-70460444 | MS.gene37836:intron | 25.0% |
| !!! | AAAATTGGTGTTTTGATTTC+AGG | - | chr5.3:70461871-70461890 | MS.gene37836:intron | 25.0% |
| !!! | AAATTGGTGTTTTGATTTCA+GGG | - | chr5.3:70461872-70461891 | MS.gene37836:intron | 25.0% |
| !!! | AGTTATGTTTTAATGAGTCA+TGG | + | chr5.3:70459221-70459240 | None:intergenic | 25.0% |
| !!! | GTTATGTTTTAATGAGTCAT+GGG | + | chr5.3:70459220-70459239 | None:intergenic | 25.0% |
| !!! | TATCATTTTTTGGAAAATGC+AGG | - | chr5.3:70459566-70459585 | MS.gene37836:intron | 25.0% |
| AAACTTCTTCGCTGAATAAA+GGG | + | chr5.3:70461350-70461369 | None:intergenic | 30.0% | |
| AATATCGCGTTAAACAGAAT+TGG | + | chr5.3:70460100-70460119 | None:intergenic | 30.0% | |
| ACAATCCGAACTAAATATGT+TGG | - | chr5.3:70460191-70460210 | MS.gene37836:intron | 30.0% | |
| ACTAGATTCACTGATCTAAA+TGG | - | chr5.3:70460466-70460485 | MS.gene37836:intron | 30.0% | |
| ACTTATTTGAGCTTCTCTAT+TGG | - | chr5.3:70460852-70460871 | MS.gene37836:CDS | 30.0% | |
| AGATTAGTAATCGGCAAAAT+CGG | + | chr5.3:70461613-70461632 | None:intergenic | 30.0% | |
| ATAAAATGTTCGCAAAAGAG+GGG | + | chr5.3:70462107-70462126 | None:intergenic | 30.0% | |
| ATAGAGAAGCTCAAATAAGT+CGG | + | chr5.3:70460852-70460871 | None:intergenic | 30.0% | |
| ATTCCTAATTAGGTAAAGGA+AGG | - | chr5.3:70459848-70459867 | MS.gene37836:intron | 30.0% | |
| ATTTAGATCAGTGAATCTAG+TGG | + | chr5.3:70460467-70460486 | None:intergenic | 30.0% | |
| CAAAACGAAAACATAAACCA+AGG | + | chr5.3:70460810-70460829 | None:intergenic | 30.0% | |
| CAAAAGGAAACTTTGAACAA+AGG | + | chr5.3:70460414-70460433 | None:intergenic | 30.0% | |
| CATGTAGCGTTTAAAAAGAA+TGG | + | chr5.3:70462032-70462051 | None:intergenic | 30.0% | |
| CCTAATTCCTAATTAGGTAA+AGG | - | chr5.3:70459844-70459863 | MS.gene37836:intron | 30.0% | |
| CCTTTACCTAATTAGGAATT+AGG | + | chr5.3:70459847-70459866 | None:intergenic | 30.0% | |
| GAAGTAACAGAAGTTACAAA+GGG | - | chr5.3:70460319-70460338 | MS.gene37836:intron | 30.0% | |
| GTTAGCTCAAATAATGAAAG+TGG | + | chr5.3:70460062-70460081 | None:intergenic | 30.0% | |
| GTTGTTCTCATAGACTATTA+TGG | + | chr5.3:70460955-70460974 | None:intergenic | 30.0% | |
| TAATTGAATTGTTTCCTAGG+TGG | - | chr5.3:70461134-70461153 | MS.gene37836:CDS | 30.0% | |
| TGAAAAAAAATGTGGTTGGA+AGG | + | chr5.3:70461682-70461701 | None:intergenic | 30.0% | |
| TGAGACCAACATATTTAGTT+CGG | + | chr5.3:70460199-70460218 | None:intergenic | 30.0% | |
| TGGATGAAAAAAAATGTGGT+TGG | + | chr5.3:70461686-70461705 | None:intergenic | 30.0% | |
| TGGGGAAAAACAATTATGTT+AGG | - | chr5.3:70461896-70461915 | MS.gene37836:CDS | 30.0% | |
| TTGCACACAAATGAAGAATA+TGG | + | chr5.3:70461802-70461821 | None:intergenic | 30.0% | |
| ! | AAAACTACAAAGGTTTTGCT+TGG | + | chr5.3:70461094-70461113 | None:intergenic | 30.0% |
| ! | ATTTGCAAATTTTGTAGCTG+CGG | - | chr5.3:70459434-70459453 | MS.gene37836:CDS | 30.0% |
| ! | CATTCTTTTTAAACGCTACA+TGG | - | chr5.3:70462030-70462049 | MS.gene37836:intron | 30.0% |
| ! | GATTATTGCTTTGAATGTGT+TGG | - | chr5.3:70461454-70461473 | MS.gene37836:intron | 30.0% |
| ! | TACTTGTTGAAAGAATGGAT+TGG | - | chr5.3:70461848-70461867 | MS.gene37836:intron | 30.0% |
| !! | GAAAGAATGGATTGGAAAAT+TGG | - | chr5.3:70461856-70461875 | MS.gene37836:intron | 30.0% |
| !! | TCAAAAATTGGTAACGATGA+AGG | + | chr5.3:70460151-70460170 | None:intergenic | 30.0% |
| !!! | GCTTTTGATTTGTTGACAAA+AGG | - | chr5.3:70462266-70462285 | MS.gene37836:intron | 30.0% |
| !!! | GTCACAGTGATATCATTTTT+TGG | - | chr5.3:70459556-70459575 | MS.gene37836:CDS | 30.0% |
| !!! | TAGTTTTAGTGAGTATACTG+TGG | - | chr5.3:70460519-70460538 | MS.gene37836:intron | 30.0% |
| !!! | TTTTTTTCATCCACAATGCT+TGG | - | chr5.3:70461693-70461712 | MS.gene37836:CDS | 30.0% |
| AAAACAGCAAATGTTGAACC+GGG | - | chr5.3:70460730-70460749 | MS.gene37836:CDS | 35.0% | |
| AAACATCAATTCTTAGGGGT+AGG | - | chr5.3:70460697-70460716 | MS.gene37836:CDS | 35.0% | |
| AACTTCTTCGCTGAATAAAG+GGG | + | chr5.3:70461349-70461368 | None:intergenic | 35.0% | |
| AAGATCTCCTCAATAATCAG+TGG | + | chr5.3:70459480-70459499 | None:intergenic | 35.0% | |
| ACACACACCTTTACATCTTA+TGG | + | chr5.3:70459189-70459208 | None:intergenic | 35.0% | |
| ACTCTTATGGGGTCTATATT+TGG | - | chr5.3:70461980-70461999 | MS.gene37836:CDS | 35.0% | |
| AGCATATGCTTCATGTAGAA+AGG | - | chr5.3:70461498-70461517 | MS.gene37836:intron | 35.0% | |
| AGTATCCTTGGAAAAATTGC+AGG | + | chr5.3:70459740-70459759 | None:intergenic | 35.0% | |
| AGTTGGCAGAGATTAGTAAT+CGG | + | chr5.3:70461622-70461641 | None:intergenic | 35.0% | |
| CAAACTTCTTCGCTGAATAA+AGG | + | chr5.3:70461351-70461370 | None:intergenic | 35.0% | |
| CAACAACCCATAAGATGTAA+AGG | - | chr5.3:70459179-70459198 | MS.gene37836:CDS | 35.0% | |
| CACACACCTTTACATCTTAT+GGG | + | chr5.3:70459188-70459207 | None:intergenic | 35.0% | |
| CATAGTTATCCCAATCTTCA+TGG | - | chr5.3:70460345-70460364 | MS.gene37836:intron | 35.0% | |
| CTTCCTTCCTTTACCTAATT+AGG | + | chr5.3:70459854-70459873 | None:intergenic | 35.0% | |
| CTTTATTCAGCGAAGAAGTT+TGG | - | chr5.3:70461349-70461368 | MS.gene37836:intron | 35.0% | |
| CTTTGTAAATCCTGGAGAAT+TGG | - | chr5.3:70461381-70461400 | MS.gene37836:intron | 35.0% | |
| GAAAACAGCAAATGTTGAAC+CGG | - | chr5.3:70460729-70460748 | MS.gene37836:CDS | 35.0% | |
| GATACTTTGCACCAATAACA+TGG | + | chr5.3:70461588-70461607 | None:intergenic | 35.0% | |
| GATTATTGAGGAGATCTTTG+TGG | - | chr5.3:70459482-70459501 | MS.gene37836:CDS | 35.0% | |
| GGAAGTAACAGAAGTTACAA+AGG | - | chr5.3:70460318-70460337 | MS.gene37836:intron | 35.0% | |
| GTATCATATCTAAGCATCCA+AGG | + | chr5.3:70460445-70460464 | None:intergenic | 35.0% | |
| GTTATCATAGAGATGACTGA+TGG | - | chr5.3:70461424-70461443 | MS.gene37836:intron | 35.0% | |
| TAAGAGTCTTCCCTTGAAAA+AGG | + | chr5.3:70461967-70461986 | None:intergenic | 35.0% | |
| TCAACAGGTATGCAAATTCA+AGG | - | chr5.3:70460616-70460635 | MS.gene37836:intron | 35.0% | |
| TGGATCAATCTTGAGTAGAT+TGG | + | chr5.3:70460554-70460573 | None:intergenic | 35.0% | |
| TTGATACTCAACTTAGATCC+TGG | + | chr5.3:70461932-70461951 | None:intergenic | 35.0% | |
| TTTATTCTACCCTGTTTGTG+TGG | - | chr5.3:70459880-70459899 | MS.gene37836:intron | 35.0% | |
| TTTCAAGGGAAGACTCTTAT+GGG | - | chr5.3:70461968-70461987 | MS.gene37836:CDS | 35.0% | |
| ! | CTGCATACTTGTTGAAAGAA+TGG | - | chr5.3:70461843-70461862 | MS.gene37836:intron | 35.0% |
| ! | CTTTACATCTTATGGGTTGT+TGG | + | chr5.3:70459181-70459200 | None:intergenic | 35.0% |
| ! | GCAATTTTTCCAAGGATACT+GGG | - | chr5.3:70459740-70459759 | MS.gene37836:intron | 35.0% |
| ! | GGATGATTTTGTTACACATG+AGG | - | chr5.3:70462220-70462239 | MS.gene37836:intron | 35.0% |
| ! | TGATTTTGTTACACATGAGG+TGG | - | chr5.3:70462223-70462242 | MS.gene37836:intron | 35.0% |
| ! | TGCAATTTTTCCAAGGATAC+TGG | - | chr5.3:70459739-70459758 | MS.gene37836:intron | 35.0% |
| ! | TTGCTTTGAATGTGTTGGTA+TGG | - | chr5.3:70461459-70461478 | MS.gene37836:intron | 35.0% |
| ! | TTTTAAACGCTACATGGACA+AGG | - | chr5.3:70462036-70462055 | MS.gene37836:intron | 35.0% |
| !! | ATTTTTGGACTCGGATGTAT+TGG | - | chr5.3:70460766-70460785 | MS.gene37836:intron | 35.0% |
| !! | GATTTGTTTTCCAATTCTCC+AGG | + | chr5.3:70461394-70461413 | None:intergenic | 35.0% |
| !! | TTTTCAAGGGAAGACTCTTA+TGG | - | chr5.3:70461967-70461986 | MS.gene37836:CDS | 35.0% |
| !!! | ACAGTAGCTATTTTTGGACT+CGG | - | chr5.3:70460757-70460776 | MS.gene37836:intron | 35.0% |
| !!! | AGTACTGATGTCCTTTTTCA+AGG | - | chr5.3:70461953-70461972 | MS.gene37836:CDS | 35.0% |
| !!! | GTACTGATGTCCTTTTTCAA+GGG | - | chr5.3:70461954-70461973 | MS.gene37836:CDS | 35.0% |
| AAACAGCAAATGTTGAACCG+GGG | - | chr5.3:70460731-70460750 | MS.gene37836:CDS | 40.0% | |
| AAGAATGGGTACATCAGACT+TGG | + | chr5.3:70462017-70462036 | None:intergenic | 40.0% | |
| AGAATGGGTACATCAGACTT+GGG | + | chr5.3:70462016-70462035 | None:intergenic | 40.0% | |
| AGCAACTAGGATTATAGGTG+TGG | - | chr5.3:70461179-70461198 | MS.gene37836:intron | 40.0% | |
| AGTGTATGACCACACAAACA+GGG | + | chr5.3:70459892-70459911 | None:intergenic | 40.0% | |
| ATACGAATCCTAGCTTCATG+TGG | + | chr5.3:70459519-70459538 | None:intergenic | 40.0% | |
| ATCATAGAGATGACTGATGG+AGG | - | chr5.3:70461427-70461446 | MS.gene37836:intron | 40.0% | |
| ATCCTTGGAAAAATTGCAGG+AGG | + | chr5.3:70459737-70459756 | None:intergenic | 40.0% | |
| CACAATCAGCCATGAAGATT+GGG | + | chr5.3:70460357-70460376 | None:intergenic | 40.0% | |
| CTCACATTGCCAAAGTTCTT+AGG | - | chr5.3:70460013-70460032 | MS.gene37836:CDS | 40.0% | |
| CTTATGGGGTCTATATTTGG+AGG | - | chr5.3:70461983-70462002 | MS.gene37836:CDS | 40.0% | |
| CTTCGCTCACTCTCAAAAAT+TGG | + | chr5.3:70460163-70460182 | None:intergenic | 40.0% | |
| GATATCACTGTGACAAAGAG+AGG | + | chr5.3:70459550-70459569 | None:intergenic | 40.0% | |
| GGAAAACAAATCTGTGAGTC+AGG | - | chr5.3:70461402-70461421 | MS.gene37836:intron | 40.0% | |
| GTCACAGACTTTGTAAATCC+TGG | - | chr5.3:70461373-70461392 | MS.gene37836:intron | 40.0% | |
| TCAAATAAGTCGGTCCAAAC+AGG | + | chr5.3:70460842-70460861 | None:intergenic | 40.0% | |
| TCACAATCAGCCATGAAGAT+TGG | + | chr5.3:70460358-70460377 | None:intergenic | 40.0% | |
| TGGAAGGATAGACTCCATAA+GGG | + | chr5.3:70461666-70461685 | None:intergenic | 40.0% | |
| TGTGGAGCAACTAGGATTAT+AGG | - | chr5.3:70461174-70461193 | MS.gene37836:intron | 40.0% | |
| TTCAAGGGAAGACTCTTATG+GGG | - | chr5.3:70461969-70461988 | MS.gene37836:CDS | 40.0% | |
| TTGGAAGGATAGACTCCATA+AGG | + | chr5.3:70461667-70461686 | None:intergenic | 40.0% | |
| ! | ACTCGGATGTATTGGATTAG+CGG | - | chr5.3:70460774-70460793 | MS.gene37836:intron | 40.0% |
| ! | ATGTGTTGGTATGGCATCAT+TGG | - | chr5.3:70461468-70461487 | MS.gene37836:intron | 40.0% |
| ! | TTTTATGTGATCCAGGGTTG+TGG | - | chr5.3:70460282-70460301 | MS.gene37836:CDS | 40.0% |
| ! | TTTTGTAGTTTGGGCCTGTT+TGG | - | chr5.3:70460825-70460844 | MS.gene37836:intron | 40.0% |
| !! | GATGTATTGGATTAGCGGTA+TGG | - | chr5.3:70460779-70460798 | MS.gene37836:intron | 40.0% |
| !! | TGACAAAAGGAGAGTGTCTT+CGG | - | chr5.3:70462279-70462298 | MS.gene37836:CDS | 40.0% |
| !!! | GGTGTTTTGATTTCAGGGTT+GGG | - | chr5.3:70461877-70461896 | MS.gene37836:intron | 40.0% |
| !!! | GTGTTTTGATTTCAGGGTTG+GGG | - | chr5.3:70461878-70461897 | MS.gene37836:intron | 40.0% |
| !!! | TGGTGTTTTGATTTCAGGGT+TGG | - | chr5.3:70461876-70461895 | MS.gene37836:intron | 40.0% |
| AAAATAGCTACTGTCGACCC+CGG | + | chr5.3:70460751-70460770 | None:intergenic | 45.0% | |
| AAGGATAGACTCCATAAGGG+TGG | + | chr5.3:70461663-70461682 | None:intergenic | 45.0% | |
| ATACTGGGTCATGAGGCAAT+TGG | - | chr5.3:70459755-70459774 | MS.gene37836:intron | 45.0% | |
| ATCCAACAATTCCTCCCAAC+AGG | - | chr5.3:70460569-70460588 | MS.gene37836:intron | 45.0% | |
| ATCCTAGCTTCATGTGGCAT+TGG | + | chr5.3:70459513-70459532 | None:intergenic | 45.0% | |
| ATTGTTTCCTAGGTGGCTGA+AGG | - | chr5.3:70461141-70461160 | MS.gene37836:CDS | 45.0% | |
| CAAAGTTGCATTAGTCCGAG+TGG | + | chr5.3:70461754-70461773 | None:intergenic | 45.0% | |
| CAACTAGACACCATGACAGT+TGG | + | chr5.3:70461639-70461658 | None:intergenic | 45.0% | |
| CAACTGTCATGGTGTCTAGT+TGG | - | chr5.3:70461637-70461656 | MS.gene37836:intron | 45.0% | |
| CACTCGGACTAATGCAACTT+TGG | - | chr5.3:70461752-70461771 | MS.gene37836:intron | 45.0% | |
| CGTTGCAGACCTAAGAACTT+TGG | + | chr5.3:70460025-70460044 | None:intergenic | 45.0% | |
| CTAATCTCTGCCAACTGTCA+TGG | - | chr5.3:70461626-70461645 | MS.gene37836:intron | 45.0% | |
| CTAGACTTTGTGGAGCAACT+AGG | - | chr5.3:70461166-70461185 | MS.gene37836:intron | 45.0% | |
| CTCAGTTGTGGTGTATCAAC+AGG | - | chr5.3:70460601-70460620 | MS.gene37836:intron | 45.0% | |
| CTGTTGATACACCACAACTG+AGG | + | chr5.3:70460603-70460622 | None:intergenic | 45.0% | |
| GAGTGTATGACCACACAAAC+AGG | + | chr5.3:70459893-70459912 | None:intergenic | 45.0% | |
| GATCTCTCAAGCAAGGTTTC+GGG | + | chr5.3:70461720-70461739 | None:intergenic | 45.0% | |
| GGATCTCTCAAGCAAGGTTT+CGG | + | chr5.3:70461721-70461740 | None:intergenic | 45.0% | |
| TACTGGGTCATGAGGCAATT+GGG | - | chr5.3:70459756-70459775 | MS.gene37836:intron | 45.0% | |
| TCAATAATCAGTGGCTCACC+TGG | + | chr5.3:70459471-70459490 | None:intergenic | 45.0% | |
| TCCAACAATTCCTCCCAACA+GGG | - | chr5.3:70460570-70460589 | MS.gene37836:intron | 45.0% | |
| TGCATTAGTCCGAGTGGAAT+TGG | + | chr5.3:70461748-70461767 | None:intergenic | 45.0% | |
| TTAGCGGTATGGATTCTCCT+TGG | - | chr5.3:70460790-70460809 | MS.gene37836:intron | 45.0% | |
| TTCTTCGCTGAATAAAGGGG+AGG | + | chr5.3:70461346-70461365 | None:intergenic | 45.0% | |
| TTGATACACCACAACTGAGG+AGG | + | chr5.3:70460600-70460619 | None:intergenic | 45.0% | |
| TTGTTAACTACGTGCATGCG+TGG | + | chr5.3:70459915-70459934 | None:intergenic | 45.0% | |
| ! | AGCCTCCTGCAATTTTTCCA+AGG | - | chr5.3:70459732-70459751 | MS.gene37836:intron | 45.0% |
| ! | AGGTGAGCCACTGATTATTG+AGG | - | chr5.3:70459470-70459489 | MS.gene37836:CDS | 45.0% |
| ! | AGTGTCTTCGGTGTGTGATT+TGG | - | chr5.3:70462291-70462310 | MS.gene37836:CDS | 45.0% |
| ! | TCTTCGGTGTGTGATTTGGA+TGG | - | chr5.3:70462295-70462314 | MS.gene37836:CDS | 45.0% |
| !! | GGGTCGACAGTAGCTATTTT+TGG | - | chr5.3:70460751-70460770 | MS.gene37836:intron | 45.0% |
| AGTCCGAGTGGAATTGGACT+CGG | + | chr5.3:70461742-70461761 | None:intergenic | 50.0% | |
| ATGTTAGGAGTGGACAAGCC+AGG | - | chr5.3:70461911-70461930 | MS.gene37836:CDS | 50.0% | |
| CACCAATGCCACATGAAGCT+AGG | - | chr5.3:70459508-70459527 | MS.gene37836:CDS | 50.0% | |
| GATCCGAGTCCAATTCCACT+CGG | - | chr5.3:70461736-70461755 | MS.gene37836:intron | 50.0% | |
| GCTGAAGGAGCTAGACTTTG+TGG | - | chr5.3:70461156-70461175 | MS.gene37836:intron | 50.0% | |
| TCCAACACTTTCCACAACCC+TGG | + | chr5.3:70460296-70460315 | None:intergenic | 50.0% | |
| TCCAAGGATACTGGGTCATG+AGG | - | chr5.3:70459748-70459767 | MS.gene37836:intron | 50.0% | |
| TGTCTAGTTGGCCACCCTTA+TGG | - | chr5.3:70461649-70461668 | MS.gene37836:intron | 50.0% | |
| ! | CTAGCTTCATGTGGCATTGG+TGG | + | chr5.3:70459510-70459529 | None:intergenic | 50.0% |
| ! | TCCAGGGTTGTGGAAAGTGT+TGG | - | chr5.3:70460292-70460311 | MS.gene37836:CDS | 50.0% |
| !! | GGTTGTGGAAAGTGTTGGAG+AGG | - | chr5.3:70460297-70460316 | MS.gene37836:intron | 50.0% |
| CCTGCTGCAGCAACAAGTGA+TGG | - | chr5.3:70459155-70459174 | MS.gene37836:CDS | 55.0% | |
| GCCCTGTTGGGAGGAATTGT+TGG | + | chr5.3:70460574-70460593 | None:intergenic | 55.0% | |
| GCCTCATGACCCAGTATCCT+TGG | + | chr5.3:70459752-70459771 | None:intergenic | 55.0% | |
| GGACTCGGATCTCTCAAGCA+AGG | + | chr5.3:70461727-70461746 | None:intergenic | 55.0% | |
| ! | CCATCACTTGTTGCTGCAGC+AGG | + | chr5.3:70459158-70459177 | None:intergenic | 55.0% |
| ! | GGTTTCGGGTCCAAGCATTG+TGG | + | chr5.3:70461706-70461725 | None:intergenic | 55.0% |
| ! | TCTAGCTCCTTCAGCCACCT+AGG | + | chr5.3:70461151-70461170 | None:intergenic | 55.0% |
| ! | TCTTAGGGGTAGGTGCTGCA+TGG | - | chr5.3:70460707-70460726 | MS.gene37836:CDS | 55.0% |
| AGGGCATGCCTCCTCAGTTG+TGG | - | chr5.3:70460589-70460608 | MS.gene37836:intron | 60.0% | |
| GCTGCGGTTTGTCGCAAACC+AGG | - | chr5.3:70459450-70459469 | MS.gene37836:CDS | 60.0% | |
| ! | ACTGAGGAGGCATGCCCTGT+TGG | + | chr5.3:70460587-70460606 | None:intergenic | 60.0% |
| ! | CTGAGGAGGCATGCCCTGTT+GGG | + | chr5.3:70460586-70460605 | None:intergenic | 60.0% |
| ! | AGGAGGCATGCCCTGTTGGG+AGG | + | chr5.3:70460583-70460602 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 70459143 | 70462325 | 70459143 | ID=MS.gene37836 |
| chr5.3 | mRNA | 70459143 | 70462325 | 70459143 | ID=MS.gene37836.t1;Parent=MS.gene37836 |
| chr5.3 | exon | 70462268 | 70462325 | 70462268 | ID=MS.gene37836.t1.exon1;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70462268 | 70462325 | 70462268 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| chr5.3 | exon | 70461881 | 70462017 | 70461881 | ID=MS.gene37836.t1.exon2;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70461881 | 70462017 | 70461881 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| chr5.3 | exon | 70461691 | 70461737 | 70461691 | ID=MS.gene37836.t1.exon3;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70461691 | 70461737 | 70461691 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| chr5.3 | exon | 70460846 | 70461171 | 70460846 | ID=MS.gene37836.t1.exon4;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70460846 | 70461171 | 70460846 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| chr5.3 | exon | 70460673 | 70460755 | 70460673 | ID=MS.gene37836.t1.exon5;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70460673 | 70460755 | 70460673 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| chr5.3 | exon | 70460240 | 70460315 | 70460240 | ID=MS.gene37836.t1.exon6;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70460240 | 70460315 | 70460240 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| chr5.3 | exon | 70459949 | 70460109 | 70459949 | ID=MS.gene37836.t1.exon7;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70459949 | 70460109 | 70459949 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| chr5.3 | exon | 70459411 | 70459575 | 70459411 | ID=MS.gene37836.t1.exon8;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70459411 | 70459575 | 70459411 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| chr5.3 | exon | 70459143 | 70459259 | 70459143 | ID=MS.gene37836.t1.exon9;Parent=MS.gene37836.t1 |
| chr5.3 | CDS | 70459143 | 70459259 | 70459143 | ID=cds.MS.gene37836.t1;Parent=MS.gene37836.t1 |
| Gene Sequence |
| Protein sequence |
