Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38255.t1 | XP_003617886.2 | 94 | 302 | 17 | 1 | 1 | 301 | 3 | 304 | 3.30E-160 | 574.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38255.t1 | Q5WVQ1 | 28.8 | 160 | 95 | 3 | 134 | 293 | 4 | 144 | 8.5e-08 | 59.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38255.t1 | G7K4S5 | 94.0 | 302 | 17 | 1 | 1 | 301 | 3 | 304 | 2.4e-160 | 574.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene38255 | 0.805542 | 1.27E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene38255 | -0.805185 | 1.51E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene38255 | 0.81915 | 1.35E-52 | -1.69E-46 |
| MS.gene051245 | MS.gene38255 | 0.802862 | 4.59E-49 | -1.69E-46 |
| MS.gene052286 | MS.gene38255 | 0.814691 | 1.35E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene38255 | 0.811737 | 6.03E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene38255 | 0.81377 | 2.16E-51 | -1.69E-46 |
| MS.gene052856 | MS.gene38255 | 0.814323 | 1.63E-51 | -1.69E-46 |
| MS.gene053132 | MS.gene38255 | 0.80825 | 3.40E-50 | -1.69E-46 |
| MS.gene054185 | MS.gene38255 | 0.802384 | 5.76E-49 | -1.69E-46 |
| MS.gene054667 | MS.gene38255 | 0.800674 | 1.29E-48 | -1.69E-46 |
| MS.gene055133 | MS.gene38255 | 0.80239 | 5.74E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene38255 | -0.822334 | 2.50E-53 | -1.69E-46 |
| MS.gene056601 | MS.gene38255 | 0.821813 | 3.31E-53 | -1.69E-46 |
| MS.gene057057 | MS.gene38255 | 0.812039 | 5.18E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene38255 | 0.80134 | 9.43E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene38255 | 0.837829 | 4.13E-57 | -1.69E-46 |
| MS.gene060476 | MS.gene38255 | 0.822791 | 1.96E-53 | -1.69E-46 |
| MS.gene060619 | MS.gene38255 | 0.810662 | 1.03E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38255.t1 | MTR_5g096560 | 94.040 | 302 | 17 | 1 | 1 | 301 | 3 | 304 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38255.t1 | AT3G13226 | 42.915 | 247 | 118 | 6 | 70 | 294 | 132 | 377 | 6.65e-60 | 196 |
Find 61 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATAAATGATGGGAAAAT+TGG | 0.155313 | 5.3:-77972120 | MS.gene38255:CDS |
| GGAGAAGAGAAGTCAATTAT+TGG | 0.244523 | 5.3:-77967075 | MS.gene38255:CDS |
| ATCACTGCCTCCACTGCATT+AGG | 0.286004 | 5.3:+77969630 | None:intergenic |
| TTAGTTCGTGTGTTGGTGTT+AGG | 0.315723 | 5.3:-77972218 | MS.gene38255:CDS |
| TCACTGCCTCCACTGCATTA+GGG | 0.318334 | 5.3:+77969631 | None:intergenic |
| TTAGGAACATTTGGAAGTTT+CGG | 0.323492 | 5.3:-77972266 | MS.gene38255:intron |
| GTATGAACTTCATCTGGATT+TGG | 0.326325 | 5.3:+77972066 | None:intergenic |
| CTTGATTTCCTTGTCTCCTT+CGG | 0.343399 | 5.3:+77966982 | None:intergenic |
| AAGGACAACAATGATTGTTC+TGG | 0.357621 | 5.3:-77967096 | MS.gene38255:CDS |
| ACCTTTGAACCACTGCTTTG+AGG | 0.360986 | 5.3:+77967014 | None:intergenic |
| GGTTGGAGATTCTTGTGAAC+AGG | 0.371729 | 5.3:-77970653 | MS.gene38255:CDS |
| CTAGATGGTCTTCGTCTACT+TGG | 0.373265 | 5.3:-77967563 | MS.gene38255:CDS |
| AGCCGATTGTTCAGCATCAT+TGG | 0.373844 | 5.3:+77970606 | None:intergenic |
| CATTGATCATCTTTATGTTC+AGG | 0.374786 | 5.3:-77967037 | MS.gene38255:CDS |
| TTCACCCTGCATGATGTGTT+AGG | 0.382312 | 5.3:+77972189 | None:intergenic |
| TCAGAGGGTTCATCAATGAT+AGG | 0.382601 | 5.3:-77967611 | MS.gene38255:intron |
| AAATTGAAATTAGGAACATT+TGG | 0.383207 | 5.3:-77972275 | MS.gene38255:intron |
| CAAAGCTACAATACTCCAAA+TGG | 0.386271 | 5.3:+77972160 | None:intergenic |
| CTGTCAAATTACTTGCATCT+AGG | 0.394839 | 5.3:-77970585 | MS.gene38255:intron |
| CAGGGTGAAAATTCCCCATT+TGG | 0.401072 | 5.3:-77972175 | MS.gene38255:CDS |
| AACTCAGTATGAACTTCATC+TGG | 0.406135 | 5.3:+77972060 | None:intergenic |
| CTTACCTGTTTGATCCGTCT+TGG | 0.409978 | 5.3:+77967537 | None:intergenic |
| AGATAAATGATGGGAAAATT+GGG | 0.425380 | 5.3:-77972119 | MS.gene38255:CDS |
| GATTCTAGGTTCTGAACAAA+TGG | 0.438649 | 5.3:-77970680 | MS.gene38255:intron |
| TCATAGTAAACAAACTAGAT+AGG | 0.439290 | 5.3:-77966909 | MS.gene38255:CDS |
| CTCTTTGATGATAGTGAAGA+AGG | 0.444371 | 5.3:-77972036 | MS.gene38255:intron |
| TAGATGGTCTTCGTCTACTT+GGG | 0.452942 | 5.3:-77967562 | MS.gene38255:CDS |
| AAAGCTACAATACTCCAAAT+GGG | 0.474481 | 5.3:+77972161 | None:intergenic |
| TACCAATGATGCTGAACAAT+CGG | 0.477064 | 5.3:-77970608 | MS.gene38255:CDS |
| AATCATATTCTCAATCTAGA+TGG | 0.477303 | 5.3:-77967578 | MS.gene38255:CDS |
| AGTTAGCTACATACTGTCTC+TGG | 0.482116 | 5.3:+77969598 | None:intergenic |
| AGTGTAATCAAGATAAATGA+TGG | 0.484873 | 5.3:-77972129 | MS.gene38255:CDS |
| GGGGCCAAGACGGATCAAAC+AGG | 0.494987 | 5.3:-77967541 | MS.gene38255:intron |
| CACTGCCTCCACTGCATTAG+GGG | 0.499282 | 5.3:+77969632 | None:intergenic |
| CGAAGGAGACAAGGAAATCA+AGG | 0.508111 | 5.3:-77966981 | MS.gene38255:CDS |
| GCCTCAAAGCAGTGGTTCAA+AGG | 0.522041 | 5.3:-77967015 | MS.gene38255:CDS |
| AGAGACTTTAGTTCGTGTGT+TGG | 0.535118 | 5.3:-77972225 | MS.gene38255:CDS |
| AGAAGTTTAGCGGGAAACAT+TGG | 0.537917 | 5.3:-77972897 | MS.gene38255:CDS |
| AGATGGTCTTCGTCTACTTG+GGG | 0.547146 | 5.3:-77967561 | MS.gene38255:CDS |
| CTGAACATAAAGATGATCAA+TGG | 0.547886 | 5.3:+77967038 | None:intergenic |
| AGGTTCTGAACAAATGGAAG+AGG | 0.550123 | 5.3:-77970674 | MS.gene38255:CDS |
| TCTGAACAAATGGAAGAGGT+TGG | 0.556064 | 5.3:-77970670 | MS.gene38255:CDS |
| TGGCAGGCACTGTTCAAGAA+AGG | 0.558497 | 5.3:-77967162 | MS.gene38255:intron |
| AACATGGCAAGAAGTTTAGC+GGG | 0.560092 | 5.3:-77972906 | MS.gene38255:CDS |
| ACATTCCTAACACATCATGC+AGG | 0.560654 | 5.3:-77972194 | MS.gene38255:CDS |
| GGAAATCAAGGATTATTCGA+TGG | 0.569098 | 5.3:-77966969 | MS.gene38255:CDS |
| ATGTTCAGGCCTCAAAGCAG+TGG | 0.582693 | 5.3:-77967023 | MS.gene38255:CDS |
| GAGTATTGTAGCTTTGCTGA+TGG | 0.583649 | 5.3:-77972153 | MS.gene38255:CDS |
| ATTCGATGGCTTCAATATCG+TGG | 0.583859 | 5.3:-77966955 | MS.gene38255:CDS |
| TTCGGATTGAATGCTTCAAG+AGG | 0.601314 | 5.3:-77972248 | MS.gene38255:CDS |
| GTCCCAGTTGTGCACTATGG+AGG | 0.603930 | 5.3:+77966874 | None:intergenic |
| AGAATGTTCCGAAGGAGACA+AGG | 0.604609 | 5.3:-77966990 | MS.gene38255:CDS |
| GAACATGGCAAGAAGTTTAG+CGG | 0.609052 | 5.3:-77972907 | None:intergenic |
| GTGTAATCAAGATAAATGAT+GGG | 0.609791 | 5.3:-77972128 | MS.gene38255:CDS |
| GAAATTCTCCCCTAATGCAG+TGG | 0.612114 | 5.3:-77969640 | MS.gene38255:CDS |
| ATTCTCCCCTAATGCAGTGG+AGG | 0.636527 | 5.3:-77969637 | MS.gene38255:CDS |
| CAAAGGTCAGAATGTTCCGA+AGG | 0.644420 | 5.3:-77966998 | MS.gene38255:CDS |
| GATGGTCTTCGTCTACTTGG+GGG | 0.660488 | 5.3:-77967560 | MS.gene38255:CDS |
| CATTCCTAACACATCATGCA+GGG | 0.662603 | 5.3:-77972193 | MS.gene38255:CDS |
| AAGCTACAATACTCCAAATG+GGG | 0.674118 | 5.3:+77972162 | None:intergenic |
| TTTGGAGAAGTTTCACAATG+CGG | 0.677880 | 5.3:+77972084 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTGAAATTGAAATT+AGG | - | chr5.3:77967507-77967526 | MS.gene38255:intron | 10.0% |
| !!! | TAAAATTTTAAAAGGTAAAT+TGG | + | chr5.3:77968920-77968939 | None:intergenic | 10.0% |
| !! | AATATTCAACATGATTATAA+GGG | + | chr5.3:77970480-77970499 | None:intergenic | 15.0% |
| !! | AATTTCAGAAAAAAATACAA+TGG | + | chr5.3:77969571-77969590 | None:intergenic | 15.0% |
| !! | AGACAATAATACTATATAAA+CGG | - | chr5.3:77971311-77971330 | MS.gene38255:intron | 15.0% |
| !! | TCTAGAAAATTATTAAGATT+TGG | + | chr5.3:77970884-77970903 | None:intergenic | 15.0% |
| !!! | AAAATACAATGGATTTTTTA+AGG | + | chr5.3:77969560-77969579 | None:intergenic | 15.0% |
| !!! | ACAAAAATTTGATAATGTTA+CGG | - | chr5.3:77968740-77968759 | MS.gene38255:intron | 15.0% |
| !!! | ACTAGATATATATCTAATTT+TGG | - | chr5.3:77971339-77971358 | MS.gene38255:intron | 15.0% |
| !!! | ATCCAAAAATTTTAATAAGT+GGG | - | chr5.3:77970721-77970740 | MS.gene38255:intron | 15.0% |
| !!! | ATTCTTATATTTGTTGAAAA+AGG | + | chr5.3:77971097-77971116 | None:intergenic | 15.0% |
| !!! | ATTTTAACTTATGTAGTATT+AGG | - | chr5.3:77972376-77972395 | MS.gene38255:intron | 15.0% |
| !!! | CATAATTTTTTTGAGATAAA+TGG | + | chr5.3:77966990-77967009 | None:intergenic | 15.0% |
| !!! | CTAGATATATATCTAATTTT+GGG | - | chr5.3:77971340-77971359 | MS.gene38255:intron | 15.0% |
| !!! | CTTAATGCTAAAATTTTAAA+AGG | + | chr5.3:77968928-77968947 | None:intergenic | 15.0% |
| !!! | GTTACATTATTTATTTTACT+GGG | + | chr5.3:77970277-77970296 | None:intergenic | 15.0% |
| !!! | TACAAATAATGCTTATTTTT+AGG | + | chr5.3:77971146-77971165 | None:intergenic | 15.0% |
| !!! | TGAATTTTAATACATTCTTT+GGG | - | chr5.3:77972122-77972141 | MS.gene38255:CDS | 15.0% |
| !!! | TGTTACATTATTTATTTTAC+TGG | + | chr5.3:77970278-77970297 | None:intergenic | 15.0% |
| !!! | TTTCAGCTTTTAATTAATAA+CGG | - | chr5.3:77967186-77967205 | MS.gene38255:intron | 15.0% |
| !! | AAAGATATACAAAGAAATGT+AGG | + | chr5.3:77969944-77969963 | None:intergenic | 20.0% |
| !! | AAATAAGTTGTTTATCCAAA+CGG | - | chr5.3:77967409-77967428 | MS.gene38255:intron | 20.0% |
| !! | AAATTGAAATTAGGAACATT+TGG | - | chr5.3:77967516-77967535 | MS.gene38255:intron | 20.0% |
| !! | AAGCATCAAATTTAATTACA+AGG | + | chr5.3:77968198-77968217 | None:intergenic | 20.0% |
| !! | AATTTAATTCTTGACTGATT+CGG | - | chr5.3:77971997-77972016 | MS.gene38255:intron | 20.0% |
| !! | ATAAAATAGAATGATGTCAT+AGG | + | chr5.3:77967903-77967922 | None:intergenic | 20.0% |
| !! | ATATAAAATAGTAGTTACCT+GGG | + | chr5.3:77966963-77966982 | None:intergenic | 20.0% |
| !! | ATATTCAACATGATTATAAG+GGG | + | chr5.3:77970479-77970498 | None:intergenic | 20.0% |
| !! | ATCCTAGATATTAATGATTA+AGG | + | chr5.3:77968845-77968864 | None:intergenic | 20.0% |
| !! | ATGTAAACTTTCGAAAAATT+TGG | + | chr5.3:77971901-77971920 | None:intergenic | 20.0% |
| !! | ATTCAACTTATCAAATACAA+TGG | + | chr5.3:77968705-77968724 | None:intergenic | 20.0% |
| !! | GAATATTCAACATGATTATA+AGG | + | chr5.3:77970481-77970500 | None:intergenic | 20.0% |
| !! | GACAAAAACATTACAAAATA+TGG | + | chr5.3:77967437-77967456 | None:intergenic | 20.0% |
| !! | GACAATAATACTATATAAAC+GGG | - | chr5.3:77971312-77971331 | MS.gene38255:intron | 20.0% |
| !! | TAACTTCATATCAAAATTGT+TGG | - | chr5.3:77970211-77970230 | MS.gene38255:intron | 20.0% |
| !! | TACATTTCTTTGTATATCTT+TGG | - | chr5.3:77969943-77969962 | MS.gene38255:intron | 20.0% |
| !! | TATATAAAATAGTAGTTACC+TGG | + | chr5.3:77966964-77966983 | None:intergenic | 20.0% |
| !! | TATCAAAACATTTAATTACC+TGG | - | chr5.3:77969711-77969730 | MS.gene38255:intron | 20.0% |
| !! | TCATACTAATATGATCAAAT+TGG | + | chr5.3:77971927-77971946 | None:intergenic | 20.0% |
| !! | TGATAATAATAGCAAGTATA+TGG | + | chr5.3:77972572-77972591 | None:intergenic | 20.0% |
| !! | TGGAATGAATTATAACTATT+TGG | - | chr5.3:77969651-77969670 | MS.gene38255:CDS | 20.0% |
| !! | TTAAAAATACAATACACATG+TGG | - | chr5.3:77971363-77971382 | MS.gene38255:intron | 20.0% |
| !! | TTAATCATTAATATCTAGGA+TGG | - | chr5.3:77968844-77968863 | MS.gene38255:intron | 20.0% |
| !! | TTGTAATTAAATTTGATGCT+TGG | - | chr5.3:77968197-77968216 | MS.gene38255:intron | 20.0% |
| !!! | AAAAATTTGATAATGTTACG+GGG | - | chr5.3:77968742-77968761 | MS.gene38255:intron | 20.0% |
| !!! | AAATATTGTTAGAGTTTGTT+AGG | + | chr5.3:77970427-77970446 | None:intergenic | 20.0% |
| !!! | ACCTTTATAAGATTTTTAAC+TGG | - | chr5.3:77971666-77971685 | MS.gene38255:intron | 20.0% |
| !!! | CAAAAATTTGATAATGTTAC+GGG | - | chr5.3:77968741-77968760 | MS.gene38255:intron | 20.0% |
| !!! | CCTTTATAAGATTTTTAACT+GGG | - | chr5.3:77971667-77971686 | MS.gene38255:intron | 20.0% |
| !!! | CTGAATTTTAATACATTCTT+TGG | - | chr5.3:77972121-77972140 | MS.gene38255:CDS | 20.0% |
| !!! | GATCCAAAAATTTTAATAAG+TGG | - | chr5.3:77970720-77970739 | MS.gene38255:intron | 20.0% |
| !!! | TCCAAAAATTTTAATAAGTG+GGG | - | chr5.3:77970722-77970741 | MS.gene38255:intron | 20.0% |
| !!! | TTATTTGAACAACCATTTTT+GGG | + | chr5.3:77969985-77970004 | None:intergenic | 20.0% |
| !!! | TTTTGTATATGTATAAAGAC+TGG | - | chr5.3:77968622-77968641 | MS.gene38255:intron | 20.0% |
| ! | AAATAACCGACCTATAATAA+AGG | - | chr5.3:77968019-77968038 | MS.gene38255:intron | 25.0% |
| ! | AATCATATTCTCAATCTAGA+TGG | - | chr5.3:77972213-77972232 | MS.gene38255:CDS | 25.0% |
| ! | AATCATGACCAAAAACATTA+TGG | + | chr5.3:77967466-77967485 | None:intergenic | 25.0% |
| ! | ACAAACTCTAACAATATTTC+TGG | - | chr5.3:77970428-77970447 | MS.gene38255:intron | 25.0% |
| ! | ACATTAATACTACCAATTCA+TGG | - | chr5.3:77968139-77968158 | MS.gene38255:intron | 25.0% |
| ! | AGAATAGGGAAAAAAAGAAA+TGG | - | chr5.3:77971770-77971789 | MS.gene38255:intron | 25.0% |
| ! | AGTGTAATCAAGATAAATGA+TGG | - | chr5.3:77967662-77967681 | MS.gene38255:intron | 25.0% |
| ! | ATTGGAAAAACAAATGAACA+TGG | + | chr5.3:77968902-77968921 | None:intergenic | 25.0% |
| ! | CAACGTGTAAAAAATATTAG+AGG | + | chr5.3:77970012-77970031 | None:intergenic | 25.0% |
| ! | CATTAATACTACCAATTCAT+GGG | - | chr5.3:77968140-77968159 | MS.gene38255:intron | 25.0% |
| ! | CCCAGTTAAAAATCTTATAA+AGG | + | chr5.3:77971670-77971689 | None:intergenic | 25.0% |
| ! | CTCCTTAATCATTAATATCT+AGG | - | chr5.3:77968840-77968859 | MS.gene38255:intron | 25.0% |
| ! | CTCTAGTATTGTAAAGTAAT+AGG | + | chr5.3:77972489-77972508 | None:intergenic | 25.0% |
| ! | CTGAAATTTCAACTTGATTT+GGG | - | chr5.3:77969583-77969602 | MS.gene38255:intron | 25.0% |
| ! | GAAGTTATAACTTATCTATG+TGG | - | chr5.3:77968300-77968319 | MS.gene38255:intron | 25.0% |
| ! | GAATAGAACATGATAAAAAC+TGG | + | chr5.3:77970624-77970643 | None:intergenic | 25.0% |
| ! | GAGAACATTCTCTAAATAAA+TGG | + | chr5.3:77968654-77968673 | None:intergenic | 25.0% |
| ! | GCTTGTAAGTTATTAACAAA+GGG | - | chr5.3:77969744-77969763 | MS.gene38255:intron | 25.0% |
| ! | GGAAAAACAGTATTATCTTA+TGG | - | chr5.3:77968780-77968799 | MS.gene38255:intron | 25.0% |
| ! | GTGTAATCAAGATAAATGAT+GGG | - | chr5.3:77967663-77967682 | MS.gene38255:intron | 25.0% |
| ! | TATAAAATAGTAGTTACCTG+GGG | + | chr5.3:77966962-77966981 | None:intergenic | 25.0% |
| ! | TCATAGTAAACAAACTAGAT+AGG | - | chr5.3:77972882-77972901 | MS.gene38255:CDS | 25.0% |
| ! | TCGGTTAATCATAGTTTAAA+TGG | + | chr5.3:77968582-77968601 | None:intergenic | 25.0% |
| ! | TGCTTGTAAGTTATTAACAA+AGG | - | chr5.3:77969743-77969762 | MS.gene38255:intron | 25.0% |
| ! | TTCAACTATAGCAAACAAAT+GGG | + | chr5.3:77967014-77967033 | None:intergenic | 25.0% |
| ! | TTCTAATTTAGATACCCAAT+TGG | - | chr5.3:77967087-77967106 | MS.gene38255:CDS | 25.0% |
| ! | TTTCAACTATAGCAAACAAA+TGG | + | chr5.3:77967015-77967034 | None:intergenic | 25.0% |
| !! | AAACACGGATTTTATCATTT+TGG | - | chr5.3:77968085-77968104 | MS.gene38255:intron | 25.0% |
| !! | AACACGGATTTTATCATTTT+GGG | - | chr5.3:77968086-77968105 | MS.gene38255:intron | 25.0% |
| !! | AAGATAAATGATGGGAAAAT+TGG | - | chr5.3:77967671-77967690 | MS.gene38255:intron | 25.0% |
| !! | ACCCCACTTATTAAAATTTT+TGG | + | chr5.3:77970726-77970745 | None:intergenic | 25.0% |
| !! | AGATAAATGATGGGAAAATT+GGG | - | chr5.3:77967672-77967691 | MS.gene38255:intron | 25.0% |
| !! | ATCAGAACAACTTTATTTCT+TGG | + | chr5.3:77969077-77969096 | None:intergenic | 25.0% |
| !! | GATTTTTCTTGCACTAAATT+AGG | + | chr5.3:77969337-77969356 | None:intergenic | 25.0% |
| !! | GTTATTTGAACAACCATTTT+TGG | + | chr5.3:77969986-77970005 | None:intergenic | 25.0% |
| !! | GTTCTAATAATGGTAATGTT+AGG | + | chr5.3:77970580-77970599 | None:intergenic | 25.0% |
| !! | TCATGATTCCATAATGTTTT+TGG | - | chr5.3:77967455-77967474 | MS.gene38255:intron | 25.0% |
| !! | TCTGAAATTTCAACTTGATT+TGG | - | chr5.3:77969582-77969601 | MS.gene38255:intron | 25.0% |
| !! | TGTTTTCAAAACTGAATGAA+TGG | + | chr5.3:77968070-77968089 | None:intergenic | 25.0% |
| !!! | AAAATTTGATAATGTTACGG+GGG | - | chr5.3:77968743-77968762 | MS.gene38255:intron | 25.0% |
| !!! | AGATATTTGTTTTATCTCAC+GGG | - | chr5.3:77968432-77968451 | MS.gene38255:intron | 25.0% |
| !!! | CTCTAATATTTTTTACACGT+TGG | - | chr5.3:77970010-77970029 | MS.gene38255:intron | 25.0% |
| !!! | GAGATATTTGTTTTATCTCA+CGG | - | chr5.3:77968431-77968450 | MS.gene38255:intron | 25.0% |
| !!! | GCTCTAGAGAAAATTAATAA+TGG | + | chr5.3:77968810-77968829 | None:intergenic | 25.0% |
| !!! | TAATACATTCTTTGGGATTA+TGG | - | chr5.3:77972129-77972148 | MS.gene38255:CDS | 25.0% |
| !!! | TAGTTCGGTTTTTAAAACAT+TGG | + | chr5.3:77967926-77967945 | None:intergenic | 25.0% |
| !!! | TCAGCTAATATTTTGAGAAA+TGG | - | chr5.3:77969790-77969809 | MS.gene38255:intron | 25.0% |
| !!! | TTACCATTTTAACTTTGATG+CGG | - | chr5.3:77971601-77971620 | MS.gene38255:intron | 25.0% |
| !!! | TTCATTCAGTTTTGAAAACA+CGG | - | chr5.3:77968070-77968089 | MS.gene38255:intron | 25.0% |
| AAAAGAAATAACAAACCCGT+GGG | + | chr5.3:77970942-77970961 | None:intergenic | 30.0% | |
| AAAATACAATACACATGTGG+AGG | - | chr5.3:77971366-77971385 | MS.gene38255:intron | 30.0% | |
| AAAGCTACAATACTCCAAAT+GGG | + | chr5.3:77967633-77967652 | None:intergenic | 30.0% | |
| AACATATTCATGACTACACA+GGG | + | chr5.3:77971574-77971593 | None:intergenic | 30.0% | |
| AACCTAAAAGATAAACTGAC+AGG | + | chr5.3:77971027-77971046 | None:intergenic | 30.0% | |
| ACAGATCAAGTGTATAAACT+AGG | + | chr5.3:77968385-77968404 | None:intergenic | 30.0% | |
| ACGGAAAAAGAAAAGATAAC+CGG | - | chr5.3:77970350-77970369 | MS.gene38255:intron | 30.0% | |
| AGAATAGTAGCTAGATAATC+AGG | - | chr5.3:77971507-77971526 | MS.gene38255:intron | 30.0% | |
| AGCTAACTTAAAATCAGTTG+CGG | - | chr5.3:77971474-77971493 | MS.gene38255:intron | 30.0% | |
| AGTTTATACACTTGATCTGT+AGG | - | chr5.3:77968385-77968404 | MS.gene38255:intron | 30.0% | |
| ATACAAAGAAATGTAGGTAG+TGG | + | chr5.3:77969938-77969957 | None:intergenic | 30.0% | |
| ATCTATGTGGTGAGTTTATT+AGG | - | chr5.3:77968313-77968332 | MS.gene38255:intron | 30.0% | |
| ATTAAATTTGATGCTTGGCA+CGG | - | chr5.3:77968202-77968221 | MS.gene38255:intron | 30.0% | |
| ATTGGAAAGCAAAAAGTAAG+AGG | + | chr5.3:77972306-77972325 | None:intergenic | 30.0% | |
| CAGATCAAGTGTATAAACTA+GGG | + | chr5.3:77968384-77968403 | None:intergenic | 30.0% | |
| CATTGATCATCTTTATGTTC+AGG | - | chr5.3:77972754-77972773 | MS.gene38255:intron | 30.0% | |
| CCAAACTTGGATTAACTTAA+TGG | + | chr5.3:77967880-77967899 | None:intergenic | 30.0% | |
| CCATTAAGTTAATCCAAGTT+TGG | - | chr5.3:77967877-77967896 | MS.gene38255:intron | 30.0% | |
| CTATCAGATACATTTGGAAA+TGG | + | chr5.3:77970252-77970271 | None:intergenic | 30.0% | |
| CTATTTAACAGTTTAGCACT+CGG | + | chr5.3:77968601-77968620 | None:intergenic | 30.0% | |
| CTGAACATAAAGATGATCAA+TGG | + | chr5.3:77972756-77972775 | None:intergenic | 30.0% | |
| GAAGTTAAATGAGCTAAAAC+AGG | + | chr5.3:77968964-77968983 | None:intergenic | 30.0% | |
| GCTTCATATTCTCTTCAATT+TGG | + | chr5.3:77969304-77969323 | None:intergenic | 30.0% | |
| GGAAAATAGTCAACTTTCTA+GGG | + | chr5.3:77968561-77968580 | None:intergenic | 30.0% | |
| TCTGCAATAACAGATACAAA+TGG | - | chr5.3:77970676-77970695 | MS.gene38255:intron | 30.0% | |
| TGGAAAATAGTCAACTTTCT+AGG | + | chr5.3:77968562-77968581 | None:intergenic | 30.0% | |
| TTACAAGCAATAACAAATCC+AGG | + | chr5.3:77969732-77969751 | None:intergenic | 30.0% | |
| TTAGGAACATTTGGAAGTTT+CGG | - | chr5.3:77967525-77967544 | MS.gene38255:intron | 30.0% | |
| TTATCTAGCTACTATTCTCA+TGG | + | chr5.3:77971505-77971524 | None:intergenic | 30.0% | |
| TTCAAATTTAGCTACCCAAT+TGG | - | chr5.3:77967211-77967230 | MS.gene38255:intron | 30.0% | |
| TTGCAGATCACTATATCAAA+GGG | - | chr5.3:77969618-77969637 | MS.gene38255:CDS | 30.0% | |
| TTGCATTGAATGTATATGCA+CGG | + | chr5.3:77970044-77970063 | None:intergenic | 30.0% | |
| TTTGCAGATCACTATATCAA+AGG | - | chr5.3:77969617-77969636 | MS.gene38255:CDS | 30.0% | |
| ! | AACCTGTCAGTTTATCTTTT+AGG | - | chr5.3:77971022-77971041 | MS.gene38255:intron | 30.0% |
| ! | AATAATGGTAATGTTAGGAG+CGG | + | chr5.3:77970575-77970594 | None:intergenic | 30.0% |
| ! | AATCAAGCTTTTCAGTGATT+TGG | + | chr5.3:77967040-77967059 | None:intergenic | 30.0% |
| ! | ACACGGATTTTATCATTTTG+GGG | - | chr5.3:77968087-77968106 | MS.gene38255:intron | 30.0% |
| ! | GCAAGCAAAAGTTCTAATAA+TGG | + | chr5.3:77970590-77970609 | None:intergenic | 30.0% |
| ! | GGAGATATGCTTATAGTTTT+TGG | + | chr5.3:77968363-77968382 | None:intergenic | 30.0% |
| ! | GTTCTGATCATCTTAATTTG+TGG | - | chr5.3:77969089-77969108 | MS.gene38255:intron | 30.0% |
| ! | TTACAATACTAGAGAGCATA+TGG | - | chr5.3:77972495-77972514 | MS.gene38255:intron | 30.0% |
| ! | TTATGGCTGACTATACATTT+TGG | - | chr5.3:77968508-77968527 | MS.gene38255:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5.3:77967311-77967330 | MS.gene38255:intron | 30.0% |
| !! | ATTTTATCCCTTTGTTTCAG+AGG | - | chr5.3:77972164-77972183 | MS.gene38255:CDS | 30.0% |
| !! | CATCTTAATTTGTGGATTCT+AGG | - | chr5.3:77969097-77969116 | MS.gene38255:intron | 30.0% |
| !! | GATTTTAAGTCATCTTCATC+AGG | + | chr5.3:77971436-77971455 | None:intergenic | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5.3:77967312-77967331 | MS.gene38255:intron | 30.0% |
| !! | TTTTATCCCTTTGTTTCAGA+GGG | - | chr5.3:77972165-77972184 | MS.gene38255:CDS | 30.0% |
| !!! | AATTTTCTCTAGAGCTTGAT+AGG | - | chr5.3:77968815-77968834 | MS.gene38255:intron | 30.0% |
| !!! | ATTTTTTACACGTTGGACTT+GGG | - | chr5.3:77970017-77970036 | MS.gene38255:intron | 30.0% |
| !!! | TATTTTTTACACGTTGGACT+TGG | - | chr5.3:77970016-77970035 | MS.gene38255:intron | 30.0% |
| !!! | TTATAGGTCGGTTATTTTTG+CGG | + | chr5.3:77968016-77968035 | None:intergenic | 30.0% |
| !!! | TTTTGTTTTATTTCAGCCCA+CGG | - | chr5.3:77970923-77970942 | MS.gene38255:intron | 30.0% |
| AAAGTAAGAGGATGAACAGA+AGG | + | chr5.3:77972294-77972313 | None:intergenic | 35.0% | |
| AACTAAAGACAGCAAAGTGT+TGG | + | chr5.3:77972335-77972354 | None:intergenic | 35.0% | |
| AACTCAGTATGAACTTCATC+TGG | + | chr5.3:77967734-77967753 | None:intergenic | 35.0% | |
| AACTGAATGAATGGATCAAC+CGG | + | chr5.3:77968061-77968080 | None:intergenic | 35.0% | |
| AAGCTACAATACTCCAAATG+GGG | + | chr5.3:77967632-77967651 | None:intergenic | 35.0% | |
| AAGGACAACAATGATTGTTC+TGG | - | chr5.3:77972695-77972714 | MS.gene38255:intron | 35.0% | |
| AAGTAAGAGGATGAACAGAA+GGG | + | chr5.3:77972293-77972312 | None:intergenic | 35.0% | |
| AGACACACATAGATAACCAT+CGG | - | chr5.3:77968477-77968496 | MS.gene38255:intron | 35.0% | |
| ATAATGTTACGGGGGAAATT+GGG | - | chr5.3:77968751-77968770 | MS.gene38255:intron | 35.0% | |
| ATGTTTAGACAGTGGAGAAT+AGG | - | chr5.3:77971755-77971774 | MS.gene38255:intron | 35.0% | |
| CAAAAGAAATAACAAACCCG+TGG | + | chr5.3:77970943-77970962 | None:intergenic | 35.0% | |
| CAAAGCTACAATACTCCAAA+TGG | + | chr5.3:77967634-77967653 | None:intergenic | 35.0% | |
| CAACCGCATCAAAGTTAAAA+TGG | + | chr5.3:77971607-77971626 | None:intergenic | 35.0% | |
| CCAATTGGTTGCATTGTAAT+GGG | - | chr5.3:77967102-77967121 | MS.gene38255:CDS | 35.0% | |
| CCATTACAATGCAACCAATT+GGG | + | chr5.3:77967104-77967123 | None:intergenic | 35.0% | |
| CTAACTTAAAATCAGTTGCG+GGG | - | chr5.3:77971476-77971495 | MS.gene38255:intron | 35.0% | |
| CTGTCAAATTACTTGCATCT+AGG | - | chr5.3:77969206-77969225 | MS.gene38255:intron | 35.0% | |
| GAACATATTCATGACTACAC+AGG | + | chr5.3:77971575-77971594 | None:intergenic | 35.0% | |
| GATGTAACATGTTTAGACAG+TGG | - | chr5.3:77971747-77971766 | MS.gene38255:intron | 35.0% | |
| GCATCACTTGTTCTTAACAT+CGG | - | chr5.3:77969398-77969417 | MS.gene38255:intron | 35.0% | |
| GCTAACTTAAAATCAGTTGC+GGG | - | chr5.3:77971475-77971494 | MS.gene38255:intron | 35.0% | |
| GGAAATCAAGGATTATTCGA+TGG | - | chr5.3:77972822-77972841 | MS.gene38255:intron | 35.0% | |
| GGAGAAGAGAAGTCAATTAT+TGG | - | chr5.3:77972716-77972735 | MS.gene38255:intron | 35.0% | |
| GTATGAACTTCATCTGGATT+TGG | + | chr5.3:77967728-77967747 | None:intergenic | 35.0% | |
| TAATGTAGTTCCTCTGTGAA+GGG | + | chr5.3:77968125-77968144 | None:intergenic | 35.0% | |
| TACCAATGATGCTGAACAAT+CGG | - | chr5.3:77969183-77969202 | MS.gene38255:intron | 35.0% | |
| TATCAAAGGGTGAGATAATG+TGG | - | chr5.3:77969631-77969650 | MS.gene38255:CDS | 35.0% | |
| TCCATAAGTTGTCCCAAAAA+TGG | - | chr5.3:77969970-77969989 | MS.gene38255:intron | 35.0% | |
| TCCTATTCAGCCCATTTATT+AGG | - | chr5.3:77970537-77970556 | MS.gene38255:intron | 35.0% | |
| TCCTCTCTTTCACACAAAAA+CGG | + | chr5.3:77971725-77971744 | None:intergenic | 35.0% | |
| TCTCACAAAACTTATGAGAG+TGG | + | chr5.3:77967306-77967325 | None:intergenic | 35.0% | |
| TGGACCTATGCCTAATAAAT+GGG | + | chr5.3:77970550-77970569 | None:intergenic | 35.0% | |
| TGGGTTCTATCAGATACATT+TGG | + | chr5.3:77970258-77970277 | None:intergenic | 35.0% | |
| TGTTTAGACAGTGGAGAATA+GGG | - | chr5.3:77971756-77971775 | MS.gene38255:intron | 35.0% | |
| TTAAATTTGATGCTTGGCAC+GGG | - | chr5.3:77968203-77968222 | MS.gene38255:intron | 35.0% | |
| TTAATGTAGTTCCTCTGTGA+AGG | + | chr5.3:77968126-77968145 | None:intergenic | 35.0% | |
| TTCAACATGATTATAAGGGG+TGG | + | chr5.3:77970476-77970495 | None:intergenic | 35.0% | |
| TTGGACCTATGCCTAATAAA+TGG | + | chr5.3:77970551-77970570 | None:intergenic | 35.0% | |
| TTTGGAGAAGTTTCACAATG+CGG | + | chr5.3:77967710-77967729 | None:intergenic | 35.0% | |
| ! | AATAGTCAACTTTCTAGGGA+TGG | + | chr5.3:77968557-77968576 | None:intergenic | 35.0% |
| ! | AGCAGTTGAAGTGGTTTTTA+AGG | - | chr5.3:77972676-77972695 | MS.gene38255:intron | 35.0% |
| ! | ATAATGGTAATGTTAGGAGC+GGG | + | chr5.3:77970574-77970593 | None:intergenic | 35.0% |
| ! | ATTTTCTCTCTCTATTGCTC+TGG | - | chr5.3:77969904-77969923 | MS.gene38255:intron | 35.0% |
| ! | CATACTGGTACTTTGGTAAT+TGG | + | chr5.3:77968272-77968291 | None:intergenic | 35.0% |
| ! | CTCTTTGATGATAGTGAAGA+AGG | - | chr5.3:77967755-77967774 | MS.gene38255:intron | 35.0% |
| ! | GTCACATTTCTGAAGAAAAC+TGG | - | chr5.3:77969462-77969481 | MS.gene38255:intron | 35.0% |
| ! | TACTAGAGAGCATATGGATA+AGG | - | chr5.3:77972501-77972520 | MS.gene38255:intron | 35.0% |
| ! | TTCTTTTCAAACTGCAGAGA+AGG | + | chr5.3:77972027-77972046 | None:intergenic | 35.0% |
| ! | TTTTTGTGTGAAAGAGAGGA+TGG | - | chr5.3:77971725-77971744 | MS.gene38255:intron | 35.0% |
| !! | GATTCTAGGTTCTGAACAAA+TGG | - | chr5.3:77969111-77969130 | MS.gene38255:intron | 35.0% |
| !! | GTGATGGACTTTAATTCTTG+TGG | - | chr5.3:77972609-77972628 | MS.gene38255:intron | 35.0% |
| !!! | ACCATTTTTGGGACAACTTA+TGG | + | chr5.3:77969974-77969993 | None:intergenic | 35.0% |
| !!! | GCTTTTAGTTCGCTTATTTG+AGG | - | chr5.3:77967276-77967295 | MS.gene38255:intron | 35.0% |
| !!! | TTCAATATCGTGGTTTTGAC+TGG | - | chr5.3:77972846-77972865 | MS.gene38255:intron | 35.0% |
| !!! | TTTGTTTTATTTCAGCCCAC+GGG | - | chr5.3:77970924-77970943 | MS.gene38255:intron | 35.0% |
| AAAAGTAGATGCACACTGCT+AGG | + | chr5.3:77972444-77972463 | None:intergenic | 40.0% | |
| AACCATCGGAGCTTACTTTA+TGG | - | chr5.3:77968491-77968510 | MS.gene38255:intron | 40.0% | |
| AACCGACCTATAATAAAGGC+CGG | - | chr5.3:77968023-77968042 | MS.gene38255:intron | 40.0% | |
| AACCGGCCTTTATTATAGGT+CGG | + | chr5.3:77968028-77968047 | None:intergenic | 40.0% | |
| ACATTCCTAACACATCATGC+AGG | - | chr5.3:77967597-77967616 | MS.gene38255:CDS | 40.0% | |
| AGAACATTATGCAGCCTAAG+AGG | - | chr5.3:77970973-77970992 | MS.gene38255:intron | 40.0% | |
| AGAAGTTTAGCGGGAAACAT+TGG | - | chr5.3:77966894-77966913 | MS.gene38255:CDS | 40.0% | |
| AGACTGTTTGGGAGAACTTA+TGG | - | chr5.3:77967323-77967342 | MS.gene38255:intron | 40.0% | |
| AGTCTAGATAGCCCATGAAT+TGG | + | chr5.3:77968154-77968173 | None:intergenic | 40.0% | |
| AGTTAGCTACATACTGTCTC+TGG | + | chr5.3:77970196-77970215 | None:intergenic | 40.0% | |
| ATATTCATGACTACACAGGG+TGG | + | chr5.3:77971571-77971590 | None:intergenic | 40.0% | |
| ATGATGTCATAGGCCAAACT+TGG | + | chr5.3:77967893-77967912 | None:intergenic | 40.0% | |
| ATGTTACAAGTTCGAGACGA+GGG | + | chr5.3:77969238-77969257 | None:intergenic | 40.0% | |
| ATTCGATGGCTTCAATATCG+TGG | - | chr5.3:77972836-77972855 | MS.gene38255:intron | 40.0% | |
| CAACGAAAATATGCGTGTGA+TGG | - | chr5.3:77972593-77972612 | MS.gene38255:intron | 40.0% | |
| CAGAGGCTTCATTATAGTTG+AGG | - | chr5.3:77968678-77968697 | MS.gene38255:intron | 40.0% | |
| CATTCCTAACACATCATGCA+GGG | - | chr5.3:77967598-77967617 | MS.gene38255:CDS | 40.0% | |
| CCCAATTGGTTGCATTGTAA+TGG | - | chr5.3:77967101-77967120 | MS.gene38255:CDS | 40.0% | |
| CCCATTACAATGCAACCAAT+TGG | + | chr5.3:77967105-77967124 | None:intergenic | 40.0% | |
| CTAGGATGGATGATCATGAT+AGG | - | chr5.3:77968858-77968877 | MS.gene38255:intron | 40.0% | |
| CTTGAACCGGCCTTTATTAT+AGG | + | chr5.3:77968032-77968051 | None:intergenic | 40.0% | |
| CTTGATTTCCTTGTCTCCTT+CGG | + | chr5.3:77972812-77972831 | None:intergenic | 40.0% | |
| GATAATGTTACGGGGGAAAT+TGG | - | chr5.3:77968750-77968769 | MS.gene38255:intron | 40.0% | |
| GGGATCGGTTACTTAAAGTA+CGG | - | chr5.3:77968223-77968242 | MS.gene38255:intron | 40.0% | |
| GTGCTCTTAGTACACTCATT+AGG | - | chr5.3:77971239-77971258 | MS.gene38255:intron | 40.0% | |
| GTTTATTAGGATACACCTGC+AGG | - | chr5.3:77968326-77968345 | MS.gene38255:intron | 40.0% | |
| TAACTTCACCTACAGCATAC+TGG | + | chr5.3:77968287-77968306 | None:intergenic | 40.0% | |
| TAAGTCATCTTCATCAGGCA+CGG | + | chr5.3:77971431-77971450 | None:intergenic | 40.0% | |
| TAGATGGTCTTCGTCTACTT+GGG | - | chr5.3:77972229-77972248 | MS.gene38255:CDS | 40.0% | |
| TATGTTACAAGTTCGAGACG+AGG | + | chr5.3:77969239-77969258 | None:intergenic | 40.0% | |
| TCAGAGGGTTCATCAATGAT+AGG | - | chr5.3:77972180-77972199 | MS.gene38255:CDS | 40.0% | |
| TCAGCCCATTTATTAGGCAT+AGG | - | chr5.3:77970543-77970562 | MS.gene38255:intron | 40.0% | |
| TCTCTTTCACACAAAAACGG+AGG | + | chr5.3:77971722-77971741 | None:intergenic | 40.0% | |
| TCTGAACAAATGGAAGAGGT+TGG | - | chr5.3:77969121-77969140 | MS.gene38255:intron | 40.0% | |
| TGAACTCAAGAGCTCTACAA+TGG | - | chr5.3:77970322-77970341 | MS.gene38255:intron | 40.0% | |
| TGCTGAAAAAGCAGTTGAAG+TGG | - | chr5.3:77972667-77972686 | MS.gene38255:intron | 40.0% | |
| TGGACTTTAATTCTTGTGGC+AGG | - | chr5.3:77972613-77972632 | MS.gene38255:intron | 40.0% | |
| TGGCTGATATAGCAATCAGT+TGG | + | chr5.3:77970503-77970522 | None:intergenic | 40.0% | |
| TTACAAAATATGGCGCCGTT+TGG | + | chr5.3:77967427-77967446 | None:intergenic | 40.0% | |
| TTCGGATTGAATGCTTCAAG+AGG | - | chr5.3:77967543-77967562 | MS.gene38255:CDS | 40.0% | |
| TTGGTTACATTCAATCCTGC+AGG | + | chr5.3:77968344-77968363 | None:intergenic | 40.0% | |
| TTGTTAGGAGAGTTTCTCTC+TGG | + | chr5.3:77970412-77970431 | None:intergenic | 40.0% | |
| ! | AGAGACTTTAGTTCGTGTGT+TGG | - | chr5.3:77967566-77967585 | MS.gene38255:CDS | 40.0% |
| ! | CTATAATAAAGGCCGGTTCA+AGG | - | chr5.3:77968030-77968049 | MS.gene38255:intron | 40.0% |
| ! | GAGTATTGTAGCTTTGCTGA+TGG | - | chr5.3:77967638-77967657 | MS.gene38255:intron | 40.0% |
| ! | TCTGTGTGAAACAGAGTGTT+TGG | - | chr5.3:77971969-77971988 | MS.gene38255:intron | 40.0% |
| ! | TTAGTTCGTGTGTTGGTGTT+AGG | - | chr5.3:77967573-77967592 | MS.gene38255:CDS | 40.0% |
| !! | AGGTTCTGAACAAATGGAAG+AGG | - | chr5.3:77969117-77969136 | MS.gene38255:intron | 40.0% |
| !! | CCTATCAAAAAGTGCCTCTT+AGG | + | chr5.3:77970990-77971009 | None:intergenic | 40.0% |
| !! | GAAATGATCGTTTAGCTCTG+TGG | + | chr5.3:77969498-77969517 | None:intergenic | 40.0% |
| !! | GATGAACCCTCTGAAACAAA+GGG | + | chr5.3:77972174-77972193 | None:intergenic | 40.0% |
| !! | GCCTAATAAATGGGCTGAAT+AGG | + | chr5.3:77970541-77970560 | None:intergenic | 40.0% |
| !! | GTTGCATTGTAATGGGTTGA+TGG | - | chr5.3:77967109-77967128 | MS.gene38255:CDS | 40.0% |
| !! | TCCGTTTTTGTGTGAAAGAG+AGG | - | chr5.3:77971721-77971740 | MS.gene38255:intron | 40.0% |
| !! | TGATGAACCCTCTGAAACAA+AGG | + | chr5.3:77972175-77972194 | None:intergenic | 40.0% |
| !! | TTGTTTTATCTCACGGGTCA+GGG | - | chr5.3:77968438-77968457 | MS.gene38255:intron | 40.0% |
| !!! | CCTAAGAGGCACTTTTTGAT+AGG | - | chr5.3:77970987-77971006 | MS.gene38255:intron | 40.0% |
| !!! | TTTGTTTTATCTCACGGGTC+AGG | - | chr5.3:77968437-77968456 | MS.gene38255:intron | 40.0% |
| AATACACATGTGGAGGCAAG+TGG | - | chr5.3:77971373-77971392 | MS.gene38255:intron | 45.0% | |
| ACCTTTGAACCACTGCTTTG+AGG | + | chr5.3:77972780-77972799 | None:intergenic | 45.0% | |
| ACTCAAGAGCTCTACAATGG+TGG | - | chr5.3:77970325-77970344 | MS.gene38255:intron | 45.0% | |
| ACTTATGCTTCCCTTCACAG+AGG | - | chr5.3:77968112-77968131 | MS.gene38255:intron | 45.0% | |
| AGAATGTTCCGAAGGAGACA+AGG | - | chr5.3:77972801-77972820 | MS.gene38255:intron | 45.0% | |
| AGAGAATGTTCTCGCTTCAG+AGG | - | chr5.3:77968661-77968680 | MS.gene38255:intron | 45.0% | |
| AGATGGTCTTCGTCTACTTG+GGG | - | chr5.3:77972230-77972249 | MS.gene38255:CDS | 45.0% | |
| AGCCATAAAGTAAGCTCCGA+TGG | + | chr5.3:77968496-77968515 | None:intergenic | 45.0% | |
| AGCCGATTGTTCAGCATCAT+TGG | + | chr5.3:77969188-77969207 | None:intergenic | 45.0% | |
| ATAAGGGGTGGAAGTAAGAG+AGG | + | chr5.3:77970464-77970483 | None:intergenic | 45.0% | |
| ATACACATGTGGAGGCAAGT+GGG | - | chr5.3:77971374-77971393 | MS.gene38255:intron | 45.0% | |
| CAAAGGTCAGAATGTTCCGA+AGG | - | chr5.3:77972793-77972812 | MS.gene38255:intron | 45.0% | |
| CAGGGTGAAAATTCCCCATT+TGG | - | chr5.3:77967616-77967635 | MS.gene38255:intron | 45.0% | |
| CCTACAGCATACTGGTACTT+TGG | + | chr5.3:77968279-77968298 | None:intergenic | 45.0% | |
| CGAAGGAGACAAGGAAATCA+AGG | - | chr5.3:77972810-77972829 | MS.gene38255:intron | 45.0% | |
| CTAGATGGTCTTCGTCTACT+TGG | - | chr5.3:77972228-77972247 | MS.gene38255:CDS | 45.0% | |
| CTGGGGATTGAAAAAATGCG+AGG | + | chr5.3:77966945-77966964 | None:intergenic | 45.0% | |
| CTTACCTGTTTGATCCGTCT+TGG | + | chr5.3:77972257-77972276 | None:intergenic | 45.0% | |
| GAAATTCTCCCCTAATGCAG+TGG | - | chr5.3:77970151-77970170 | MS.gene38255:intron | 45.0% | |
| GACAATTGCATTGCCTCAGT+AGG | + | chr5.3:77969445-77969464 | None:intergenic | 45.0% | |
| GGTTAGGAGTTCTTGAACTC+CGG | + | chr5.3:77970372-77970391 | None:intergenic | 45.0% | |
| GGTTGGAGATTCTTGTGAAC+AGG | - | chr5.3:77969138-77969157 | MS.gene38255:intron | 45.0% | |
| TAAGAGGATGAACAGAAGGG+CGG | + | chr5.3:77972290-77972309 | None:intergenic | 45.0% | |
| TAAGGGGTGGAAGTAAGAGA+GGG | + | chr5.3:77970463-77970482 | None:intergenic | 45.0% | |
| TAGGAGAGTTTCTCTCTGGT+AGG | + | chr5.3:77970408-77970427 | None:intergenic | 45.0% | |
| TGTGACTGACTGACGCAATA+CGG | + | chr5.3:77971073-77971092 | None:intergenic | 45.0% | |
| TTCACCCTGCATGATGTGTT+AGG | + | chr5.3:77967605-77967624 | None:intergenic | 45.0% | |
| ! | AGGAGCATATTGCTCTGGTT+AGG | + | chr5.3:77970388-77970407 | None:intergenic | 45.0% |
| ! | CCAAAGTACCAGTATGCTGT+AGG | - | chr5.3:77968276-77968295 | MS.gene38255:intron | 45.0% |
| ! | GAGAGCATATGGATAAGGCA+TGG | - | chr5.3:77972506-77972525 | MS.gene38255:intron | 45.0% |
| ! | GAGCTCTACAATGGTGGAAA+CGG | - | chr5.3:77970331-77970350 | MS.gene38255:intron | 45.0% |
| ! | GGTCAGCGACATTGTTTTCA+TGG | - | chr5.3:77972527-77972546 | MS.gene38255:intron | 45.0% |
| ! | TGTTTTATCTCACGGGTCAG+GGG | - | chr5.3:77968439-77968458 | MS.gene38255:intron | 45.0% |
| !! | GCAAAGTGTTGGCAGTGTAT+TGG | + | chr5.3:77972324-77972343 | None:intergenic | 45.0% |
| !!! | CTCGCATTTTTTCAATCCCC+AGG | - | chr5.3:77966943-77966962 | MS.gene38255:CDS | 45.0% |
| !! | TAAAAATTATAAAACAAAAA+AGG | + | chr5.3:77971267-77971286 | None:intergenic | 5.0% |
| ACGGGGGAAATTGGGAAGAA+AGG | - | chr5.3:77968759-77968778 | MS.gene38255:intron | 50.0% | |
| ATCACTGCCTCCACTGCATT+AGG | + | chr5.3:77970164-77970183 | None:intergenic | 50.0% | |
| ATCAGGCACGGATCTAGTGT+GGG | + | chr5.3:77971419-77971438 | None:intergenic | 50.0% | |
| ATGTTCAGGCCTCAAAGCAG+TGG | - | chr5.3:77972768-77972787 | MS.gene38255:intron | 50.0% | |
| ATTCTCCCCTAATGCAGTGG+AGG | - | chr5.3:77970154-77970173 | MS.gene38255:intron | 50.0% | |
| CAACCGGTTGAACCTTGAAC+CGG | + | chr5.3:77968045-77968064 | None:intergenic | 50.0% | |
| CATTGCCTCAGTAGGAAGCA+CGG | + | chr5.3:77969437-77969456 | None:intergenic | 50.0% | |
| CGCGAGTTCAACGTCTAGTT+CGG | + | chr5.3:77967941-77967960 | None:intergenic | 50.0% | |
| CTATATCAGCCATCGCTCCA+CGG | - | chr5.3:77970511-77970530 | MS.gene38255:intron | 50.0% | |
| CTTCTGGGTCATGGTTCAAC+TGG | - | chr5.3:77967964-77967983 | MS.gene38255:intron | 50.0% | |
| GATGGTCTTCGTCTACTTGG+GGG | - | chr5.3:77972231-77972250 | MS.gene38255:CDS | 50.0% | |
| GCCTATCTTCTTACTCCGCA+GGG | - | chr5.3:77970088-77970107 | MS.gene38255:intron | 50.0% | |
| GCCTCAAAGCAGTGGTTCAA+AGG | - | chr5.3:77972776-77972795 | MS.gene38255:intron | 50.0% | |
| GTTGAACTCGCGAGACTTCT+GGG | - | chr5.3:77967949-77967968 | MS.gene38255:intron | 50.0% | |
| TACACATGTGGAGGCAAGTG+GGG | - | chr5.3:77971375-77971394 | MS.gene38255:intron | 50.0% | |
| TATATCAGCCATCGCTCCAC+GGG | - | chr5.3:77970512-77970531 | MS.gene38255:intron | 50.0% | |
| TATCACCGTGCTTCCTACTG+AGG | - | chr5.3:77969429-77969448 | MS.gene38255:intron | 50.0% | |
| TCACTGCCTCCACTGCATTA+GGG | + | chr5.3:77970163-77970182 | None:intergenic | 50.0% | |
| TGCCTATCTTCTTACTCCGC+AGG | - | chr5.3:77970087-77970106 | MS.gene38255:intron | 50.0% | |
| TTTGATGCTTGGCACGGGAT+CGG | - | chr5.3:77968208-77968227 | MS.gene38255:intron | 50.0% | |
| ! | CTGGTAGGAGCATATTGCTC+TGG | + | chr5.3:77970393-77970412 | None:intergenic | 50.0% |
| ! | TGGCAGGCACTGTTCAAGAA+AGG | - | chr5.3:77972629-77972648 | MS.gene38255:intron | 50.0% |
| ! | TGGTAATGTTAGGAGCGGGT+TGG | + | chr5.3:77970570-77970589 | None:intergenic | 50.0% |
| ATAGGAAACCCGTGGAGCGA+TGG | + | chr5.3:77970523-77970542 | None:intergenic | 55.0% | |
| CACTGCCTCCACTGCATTAG+GGG | + | chr5.3:77970162-77970181 | None:intergenic | 55.0% | |
| CATCAGGCACGGATCTAGTG+TGG | + | chr5.3:77971420-77971439 | None:intergenic | 55.0% | |
| CGTTGAACTCGCGAGACTTC+TGG | - | chr5.3:77967948-77967967 | MS.gene38255:intron | 55.0% | |
| GCCCTGCGGAGTAAGAAGAT+AGG | + | chr5.3:77970092-77970111 | None:intergenic | 55.0% | |
| GGATCTAGTGTGGGGGCAAT+GGG | + | chr5.3:77971410-77971429 | None:intergenic | 55.0% | |
| GTAGCGTCAGTGATGCAGGA+GGG | - | chr5.3:77970823-77970842 | MS.gene38255:intron | 55.0% | |
| TCAGGCACGGATCTAGTGTG+GGG | + | chr5.3:77971418-77971437 | None:intergenic | 55.0% | |
| TGGGCTGAATAGGAAACCCG+TGG | + | chr5.3:77970531-77970550 | None:intergenic | 55.0% | |
| ! | ACTGGCTTAAACCGCTCGAG+CGG | - | chr5.3:77967982-77968001 | MS.gene38255:intron | 55.0% |
| ! | AGGCCGGTTCAAGGTTCAAC+CGG | - | chr5.3:77968039-77968058 | MS.gene38255:intron | 55.0% |
| ! | CTGACGCAATACGGAAGCGT+AGG | + | chr5.3:77971064-77971083 | None:intergenic | 55.0% |
| !! | CGGTTTTATCTCCGCTCGAG+CGG | + | chr5.3:77967996-77968015 | None:intergenic | 55.0% |
| ACGCGTAGCGTCAGTGATGC+AGG | - | chr5.3:77970819-77970838 | MS.gene38255:intron | 60.0% | |
| CAGGCACGGATCTAGTGTGG+GGG | + | chr5.3:77971417-77971436 | None:intergenic | 60.0% | |
| CGGATCTAGTGTGGGGGCAA+TGG | + | chr5.3:77971411-77971430 | None:intergenic | 60.0% | |
| CGTAGCGTCAGTGATGCAGG+AGG | - | chr5.3:77970822-77970841 | MS.gene38255:intron | 60.0% | |
| CGTCTACTTGGGGGCCAAGA+CGG | - | chr5.3:77972240-77972259 | MS.gene38255:CDS | 60.0% | |
| CTACTGCTGTGAGTGCCCTG+CGG | + | chr5.3:77970106-77970125 | None:intergenic | 60.0% | |
| CTCGCGAGACTTCTGGGTCA+TGG | - | chr5.3:77967955-77967974 | MS.gene38255:intron | 60.0% | |
| GGGGCCAAGACGGATCAAAC+AGG | - | chr5.3:77972250-77972269 | MS.gene38255:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 77966888 | 77972925 | 77966888 | ID=MS.gene38255 |
| chr5.3 | mRNA | 77966888 | 77972925 | 77966888 | ID=MS.gene38255.t1;Parent=MS.gene38255 |
| chr5.3 | exon | 77972849 | 77972925 | 77972849 | ID=MS.gene38255.t1.exon1;Parent=MS.gene38255.t1 |
| chr5.3 | CDS | 77972849 | 77972925 | 77972849 | ID=cds.MS.gene38255.t1;Parent=MS.gene38255.t1 |
| chr5.3 | exon | 77972037 | 77972284 | 77972037 | ID=MS.gene38255.t1.exon2;Parent=MS.gene38255.t1 |
| chr5.3 | CDS | 77972037 | 77972284 | 77972037 | ID=cds.MS.gene38255.t1;Parent=MS.gene38255.t1 |
| chr5.3 | exon | 77970586 | 77970694 | 77970586 | ID=MS.gene38255.t1.exon3;Parent=MS.gene38255.t1 |
| chr5.3 | CDS | 77970586 | 77970694 | 77970586 | ID=cds.MS.gene38255.t1;Parent=MS.gene38255.t1 |
| chr5.3 | exon | 77969612 | 77969704 | 77969612 | ID=MS.gene38255.t1.exon4;Parent=MS.gene38255.t1 |
| chr5.3 | CDS | 77969612 | 77969704 | 77969612 | ID=cds.MS.gene38255.t1;Parent=MS.gene38255.t1 |
| chr5.3 | exon | 77967542 | 77967629 | 77967542 | ID=MS.gene38255.t1.exon5;Parent=MS.gene38255.t1 |
| chr5.3 | CDS | 77967542 | 77967629 | 77967542 | ID=cds.MS.gene38255.t1;Parent=MS.gene38255.t1 |
| chr5.3 | exon | 77966888 | 77967178 | 77966888 | ID=MS.gene38255.t1.exon6;Parent=MS.gene38255.t1 |
| chr5.3 | CDS | 77966888 | 77967178 | 77966888 | ID=cds.MS.gene38255.t1;Parent=MS.gene38255.t1 |
| Gene Sequence |
| Protein sequence |
