Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38598.t1 | CAB77055.1 | 99.5 | 195 | 1 | 0 | 1 | 195 | 41 | 235 | 1.40E-71 | 279.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38598.t1 | O22533 | 54.5 | 189 | 77 | 4 | 2 | 182 | 42 | 229 | 1.9e-29 | 130.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38598.t1 | Q9LWA5 | 99.5 | 195 | 1 | 0 | 1 | 195 | 41 | 235 | 1.0e-71 | 279.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene38598.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057239 | MS.gene38598 | 0.819145 | 1.35E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38598 | MS.gene24464 | PPI |
| MS.gene044101 | MS.gene38598 | PPI |
| MS.gene38597 | MS.gene38598 | PPI |
| MS.gene66447 | MS.gene38598 | PPI |
| MS.gene015091 | MS.gene38598 | PPI |
| MS.gene012885 | MS.gene38598 | PPI |
| MS.gene001465 | MS.gene38598 | PPI |
| MS.gene00489 | MS.gene38598 | PPI |
| MS.gene38598 | MS.gene32887 | PPI |
| MS.gene38598 | MS.gene001466 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38598.t1 | MTR_3g102980 | 93.939 | 198 | 7 | 3 | 1 | 195 | 41 | 236 | 5.15e-118 | 334 |
| MS.gene38598.t1 | MTR_1g018420 | 57.500 | 200 | 67 | 6 | 6 | 193 | 37 | 230 | 4.21e-68 | 208 |
| MS.gene38598.t1 | MTR_1g106730 | 53.171 | 205 | 55 | 11 | 7 | 187 | 55 | 242 | 4.79e-52 | 167 |
| MS.gene38598.t1 | MTR_0160s0030 | 40.152 | 132 | 53 | 4 | 44 | 175 | 240 | 345 | 2.00e-19 | 84.7 |
| MS.gene38598.t1 | MTR_4g027440 | 45.652 | 92 | 48 | 2 | 36 | 125 | 212 | 303 | 4.07e-19 | 84.0 |
| MS.gene38598.t1 | MTR_1g067650 | 30.769 | 169 | 90 | 3 | 18 | 169 | 1 | 159 | 8.85e-19 | 79.7 |
| MS.gene38598.t1 | MTR_1g067640 | 30.357 | 168 | 90 | 3 | 19 | 169 | 1 | 158 | 5.37e-18 | 77.8 |
| MS.gene38598.t1 | MTR_4g028610 | 34.211 | 152 | 64 | 3 | 45 | 160 | 228 | 379 | 1.01e-17 | 80.5 |
| MS.gene38598.t1 | MTR_7g023560 | 34.375 | 128 | 70 | 2 | 12 | 139 | 12 | 125 | 2.95e-17 | 76.3 |
| MS.gene38598.t1 | MTR_1g090703 | 30.698 | 215 | 94 | 9 | 2 | 163 | 91 | 303 | 4.48e-17 | 78.2 |
| MS.gene38598.t1 | MTR_1g062780 | 32.178 | 202 | 80 | 8 | 12 | 167 | 81 | 271 | 9.47e-17 | 76.6 |
| MS.gene38598.t1 | MTR_5g099040 | 35.915 | 142 | 66 | 3 | 8 | 124 | 94 | 235 | 2.30e-16 | 75.5 |
| MS.gene38598.t1 | MTR_1g067660 | 33.529 | 170 | 85 | 5 | 7 | 169 | 6 | 154 | 7.04e-16 | 72.0 |
| MS.gene38598.t1 | MTR_5g062300 | 40.625 | 128 | 65 | 3 | 8 | 124 | 81 | 208 | 1.94e-15 | 72.4 |
| MS.gene38598.t1 | MTR_7g100100 | 43.038 | 79 | 38 | 2 | 44 | 122 | 34 | 105 | 2.14e-15 | 70.9 |
| MS.gene38598.t1 | MTR_4g109340 | 38.514 | 148 | 49 | 8 | 45 | 160 | 349 | 486 | 1.06e-14 | 72.0 |
| MS.gene38598.t1 | MTR_1g115345 | 39.496 | 119 | 60 | 3 | 4 | 122 | 12 | 118 | 1.15e-14 | 69.7 |
| MS.gene38598.t1 | MTR_2g084315 | 29.907 | 214 | 96 | 6 | 1 | 160 | 60 | 273 | 2.27e-14 | 70.1 |
| MS.gene38598.t1 | MTR_2g096540 | 37.037 | 108 | 43 | 2 | 15 | 122 | 13 | 95 | 2.32e-14 | 67.0 |
| MS.gene38598.t1 | MTR_4g100860 | 31.638 | 177 | 73 | 6 | 4 | 160 | 153 | 301 | 3.90e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38598.t1 | AT1G27730 | 52.660 | 188 | 74 | 5 | 7 | 191 | 50 | 225 | 1.11e-48 | 158 |
| MS.gene38598.t1 | AT5G04340 | 50.777 | 193 | 80 | 7 | 1 | 182 | 41 | 229 | 4.88e-47 | 154 |
| MS.gene38598.t1 | AT3G19580 | 51.282 | 195 | 78 | 7 | 7 | 187 | 66 | 257 | 8.46e-46 | 152 |
| MS.gene38598.t1 | AT3G19580 | 51.282 | 195 | 78 | 7 | 7 | 187 | 66 | 257 | 8.46e-46 | 152 |
| MS.gene38598.t1 | AT5G43170 | 50.543 | 184 | 51 | 8 | 7 | 186 | 45 | 192 | 7.22e-39 | 132 |
| MS.gene38598.t1 | AT3G49930 | 48.718 | 156 | 61 | 4 | 7 | 160 | 55 | 193 | 1.14e-33 | 119 |
| MS.gene38598.t1 | AT5G67450 | 42.541 | 181 | 75 | 5 | 7 | 160 | 59 | 237 | 7.01e-31 | 113 |
| MS.gene38598.t1 | AT2G45120 | 40.237 | 169 | 78 | 5 | 4 | 160 | 143 | 300 | 1.59e-24 | 98.2 |
| MS.gene38598.t1 | AT3G60580 | 37.209 | 172 | 79 | 4 | 4 | 160 | 119 | 276 | 2.98e-24 | 97.1 |
| MS.gene38598.t1 | AT2G28200 | 33.846 | 195 | 91 | 7 | 6 | 163 | 70 | 263 | 4.19e-23 | 94.0 |
| MS.gene38598.t1 | AT1G49900 | 51.579 | 95 | 40 | 2 | 45 | 138 | 194 | 283 | 5.62e-22 | 93.2 |
| MS.gene38598.t1 | AT1G49900 | 40.000 | 135 | 72 | 3 | 43 | 177 | 749 | 874 | 1.75e-18 | 83.2 |
| MS.gene38598.t1 | AT5G56200 | 47.423 | 97 | 38 | 2 | 44 | 127 | 342 | 438 | 1.01e-20 | 89.4 |
| MS.gene38598.t1 | AT5G03510 | 33.668 | 199 | 92 | 5 | 3 | 163 | 64 | 260 | 1.91e-19 | 84.0 |
| MS.gene38598.t1 | AT1G02040 | 33.103 | 145 | 71 | 3 | 5 | 123 | 104 | 248 | 3.95e-17 | 78.2 |
| MS.gene38598.t1 | AT1G02030 | 34.194 | 155 | 79 | 4 | 7 | 160 | 123 | 255 | 1.13e-16 | 76.3 |
| MS.gene38598.t1 | AT4G35280 | 38.400 | 125 | 53 | 4 | 8 | 124 | 138 | 246 | 1.44e-16 | 76.3 |
| MS.gene38598.t1 | AT3G46080 | 40.171 | 117 | 46 | 3 | 9 | 122 | 12 | 107 | 4.95e-16 | 72.4 |
| MS.gene38598.t1 | AT2G17180 | 31.481 | 162 | 72 | 6 | 8 | 160 | 121 | 252 | 7.17e-16 | 73.9 |
| MS.gene38598.t1 | AT2G37430 | 48.718 | 78 | 31 | 1 | 45 | 122 | 48 | 116 | 9.82e-16 | 72.0 |
| MS.gene38598.t1 | AT5G59820 | 37.815 | 119 | 52 | 3 | 15 | 133 | 18 | 114 | 1.21e-15 | 71.2 |
| MS.gene38598.t1 | AT3G46090 | 37.008 | 127 | 60 | 3 | 2 | 127 | 6 | 113 | 1.87e-15 | 70.9 |
| MS.gene38598.t1 | AT5G04390 | 28.509 | 228 | 93 | 7 | 8 | 166 | 96 | 322 | 2.87e-15 | 73.2 |
| MS.gene38598.t1 | AT3G53600 | 42.308 | 78 | 33 | 2 | 45 | 122 | 50 | 115 | 1.13e-14 | 68.9 |
| MS.gene38598.t1 | AT2G28710 | 39.640 | 111 | 43 | 3 | 12 | 122 | 14 | 100 | 1.87e-14 | 68.2 |
| MS.gene38598.t1 | AT3G10470 | 38.235 | 102 | 40 | 4 | 44 | 122 | 182 | 283 | 1.28e-12 | 65.9 |
| MS.gene38598.t1 | AT3G46070 | 34.545 | 110 | 55 | 3 | 13 | 122 | 16 | 108 | 1.49e-12 | 63.2 |
| MS.gene38598.t1 | AT5G61470 | 36.250 | 80 | 41 | 2 | 44 | 123 | 228 | 297 | 7.02e-11 | 60.5 |
Find 51 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCCTACTGGACAGGCTTT+GGG | 0.284852 | 3.2:-24606872 | MS.gene38598:CDS |
| TTGCGGACATAACAGCTTTC+CGG | 0.302034 | 3.2:+24606999 | None:intergenic |
| CTTCCCTACTGGACAGGCTT+TGG | 0.307779 | 3.2:-24606873 | MS.gene38598:CDS |
| GGCAGCGTTGGTGCCGGTGC+CGG | 0.399502 | 3.2:-24606824 | MS.gene38598:CDS |
| GTTGGTGCCGGTGCCGGTGC+TGG | 0.425482 | 3.2:-24606818 | MS.gene38598:CDS |
| CATAACAGCTTTCCGGTGAC+TGG | 0.439265 | 3.2:+24607006 | None:intergenic |
| GGCTTCTTTGCAGCAGGTAA+AGG | 0.446061 | 3.2:+24606668 | None:intergenic |
| AATTTCCAGCTTGAAAAGAC+AGG | 0.452679 | 3.2:+24606646 | None:intergenic |
| CTGATCTTCAGCGGTGGTTG+CGG | 0.460016 | 3.2:+24606982 | None:intergenic |
| TTTGAAAAGTCCGGAAAAGC+CGG | 0.466243 | 3.2:+24606722 | None:intergenic |
| ACTGGCTTTGTGTCCACCTA+GGG | 0.475209 | 3.2:+24607024 | None:intergenic |
| CTTACCGTTGGAAGCAGAGC+TGG | 0.488264 | 3.2:+24606931 | None:intergenic |
| GCATTTGTGACTGAGTTTAA+CGG | 0.491121 | 3.2:+24607081 | None:intergenic |
| ATGAGTCTTGTTCTTACCGT+TGG | 0.503655 | 3.2:+24606919 | None:intergenic |
| TGTCACAAATCCTTCCCTAC+TGG | 0.506283 | 3.2:-24606884 | MS.gene38598:CDS |
| AGACAGGGCTTCTTTGCAGC+AGG | 0.516606 | 3.2:+24606662 | None:intergenic |
| TACGAAGGCAGCGTTGGTGC+CGG | 0.519961 | 3.2:-24606830 | MS.gene38598:CDS |
| TTGAAAAGTCCGGAAAAGCC+GGG | 0.523321 | 3.2:+24606723 | None:intergenic |
| GACTGGCTTTGTGTCCACCT+AGG | 0.526559 | 3.2:+24607023 | None:intergenic |
| CAAATCCTTCCCTACTGGAC+AGG | 0.527321 | 3.2:-24606879 | MS.gene38598:CDS |
| CTGAGTTTAACGGTGGTTAG+CGG | 0.533899 | 3.2:+24607091 | None:intergenic |
| CCTCCCAAAGCCTGTCCAGT+AGG | 0.538116 | 3.2:+24606869 | None:intergenic |
| AGGGAAGGATTTGTGACAGA+TGG | 0.550231 | 3.2:+24606889 | None:intergenic |
| TTCTCATCTTATCAAGCCCT+AGG | 0.550654 | 3.2:-24607040 | MS.gene38598:CDS |
| GTAACTGCCTCTGAAGGAGT+TGG | 0.551176 | 3.2:-24606785 | MS.gene38598:CDS |
| CTCCCAAAGCCTGTCCAGTA+GGG | 0.562622 | 3.2:+24606870 | None:intergenic |
| TGTCACTACGAAGGCAGCGT+TGG | 0.571767 | 3.2:-24606836 | MS.gene38598:CDS |
| GGTAGTCACGGCGGATGAAG+TGG | 0.575582 | 3.2:+24606952 | None:intergenic |
| GCTACTTCCAGCACCGGCAC+CGG | 0.578492 | 3.2:+24606811 | None:intergenic |
| TAAGATCAAAATCACGGTGG+TGG | 0.583762 | 3.2:+24606750 | None:intergenic |
| CAAAGCCTGTCCAGTAGGGA+AGG | 0.583815 | 3.2:+24606874 | None:intergenic |
| GGAAGCAGAGCTGGTAGTCA+CGG | 0.585255 | 3.2:+24606940 | None:intergenic |
| CTCATCATGCTTGCTCGCAG+CGG | 0.585296 | 3.2:-24607151 | MS.gene38598:CDS |
| GTGGACACAAAGCCAGTCAC+CGG | 0.585980 | 3.2:-24607018 | MS.gene38598:CDS |
| ATTTCCAGCTTGAAAAGACA+GGG | 0.591447 | 3.2:+24606647 | None:intergenic |
| TACAGCGCTACTTCCAGCAC+CGG | 0.591699 | 3.2:+24606805 | None:intergenic |
| ATTATTGATCAGTAATGAGA+AGG | 0.592327 | 3.2:+24606623 | None:intergenic |
| AGCGCTGTAACTGCCTCTGA+AGG | 0.607763 | 3.2:-24606791 | MS.gene38598:CDS |
| CCTACTGGACAGGCTTTGGG+AGG | 0.612476 | 3.2:-24606869 | MS.gene38598:CDS |
| TCATCTTATCAAGCCCTAGG+TGG | 0.625860 | 3.2:-24607037 | MS.gene38598:CDS |
| TGACGATCCAACTCCTTCAG+AGG | 0.633382 | 3.2:+24606778 | None:intergenic |
| ACTACCAGCTCTGCTTCCAA+CGG | 0.645257 | 3.2:-24606935 | MS.gene38598:CDS |
| GGAGGTTAAGATCAAAATCA+CGG | 0.658091 | 3.2:+24606744 | None:intergenic |
| AGTCACGGCGGATGAAGTGG+TGG | 0.674100 | 3.2:+24606955 | None:intergenic |
| CACAAGCGTTGTCACTACGA+AGG | 0.677003 | 3.2:-24606845 | MS.gene38598:CDS |
| TTTGTGACTGAGTTTAACGG+TGG | 0.692042 | 3.2:+24607084 | None:intergenic |
| AGCAGAGCTGGTAGTCACGG+CGG | 0.700777 | 3.2:+24606943 | None:intergenic |
| GGTGATCTGATCTTCAGCGG+TGG | 0.700953 | 3.2:+24606976 | None:intergenic |
| GGTGGTGATCTGATCTTCAG+CGG | 0.704088 | 3.2:+24606973 | None:intergenic |
| AAAAGTCCGGAAAAGCCGGG+AGG | 0.720865 | 3.2:+24606726 | None:intergenic |
| GGTTAAGATCAAAATCACGG+TGG | 0.807668 | 3.2:+24606747 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTTCTTTGAAAAGTC+CGG | + | chr3.2:24607117-24607136 | None:intergenic | 25.0% |
| ! | CTTTTCAAAGAAGTTTTTCG+TGG | - | chr3.2:24607119-24607138 | MS.gene38598:CDS | 30.0% |
| AATTTCCAGCTTGAAAAGAC+AGG | + | chr3.2:24607184-24607203 | None:intergenic | 35.0% | |
| ATTTCCAGCTTGAAAAGACA+GGG | + | chr3.2:24607183-24607202 | None:intergenic | 35.0% | |
| CAACGACAAAAAGTCTGATT+CGG | - | chr3.2:24606705-24606724 | MS.gene38598:CDS | 35.0% | |
| GCATTTGTGACTGAGTTTAA+CGG | + | chr3.2:24606749-24606768 | None:intergenic | 35.0% | |
| GGAGGTTAAGATCAAAATCA+CGG | + | chr3.2:24607086-24607105 | None:intergenic | 35.0% | |
| !! | TGATTTTGATCTTAACCTCC+CGG | - | chr3.2:24607086-24607105 | MS.gene38598:CDS | 35.0% |
| GGTTAAGATCAAAATCACGG+TGG | + | chr3.2:24607083-24607102 | None:intergenic | 40.0% | |
| TAAGATCAAAATCACGGTGG+TGG | + | chr3.2:24607080-24607099 | None:intergenic | 40.0% | |
| TTCTCATCTTATCAAGCCCT+AGG | - | chr3.2:24606787-24606806 | MS.gene38598:CDS | 40.0% | |
| TTTGAAAAGTCCGGAAAAGC+CGG | + | chr3.2:24607108-24607127 | None:intergenic | 40.0% | |
| TTTGTGACTGAGTTTAACGG+TGG | + | chr3.2:24606746-24606765 | None:intergenic | 40.0% | |
| !! | ATGAGTCTTGTTCTTACCGT+TGG | + | chr3.2:24606911-24606930 | None:intergenic | 40.0% |
| AGGGAAGGATTTGTGACAGA+TGG | + | chr3.2:24606941-24606960 | None:intergenic | 45.0% | |
| CTGAGTTTAACGGTGGTTAG+CGG | + | chr3.2:24606739-24606758 | None:intergenic | 45.0% | |
| TCATCTTATCAAGCCCTAGG+TGG | - | chr3.2:24606790-24606809 | MS.gene38598:CDS | 45.0% | |
| TGTCACAAATCCTTCCCTAC+TGG | - | chr3.2:24606943-24606962 | MS.gene38598:CDS | 45.0% | |
| TTGAAAAGTCCGGAAAAGCC+GGG | + | chr3.2:24607107-24607126 | None:intergenic | 45.0% | |
| TTGCGGACATAACAGCTTTC+CGG | + | chr3.2:24606831-24606850 | None:intergenic | 45.0% | |
| ! | GAAGTTTTTCGTGGATGACG+AGG | - | chr3.2:24607128-24607147 | MS.gene38598:CDS | 45.0% |
| !! | CGACAAAAAGTCTGATTCGG+TGG | - | chr3.2:24606708-24606727 | MS.gene38598:CDS | 45.0% |
| ACTACCAGCTCTGCTTCCAA+CGG | - | chr3.2:24606892-24606911 | MS.gene38598:CDS | 50.0% | |
| CAAATCCTTCCCTACTGGAC+AGG | - | chr3.2:24606948-24606967 | MS.gene38598:CDS | 50.0% | |
| CATAACAGCTTTCCGGTGAC+TGG | + | chr3.2:24606824-24606843 | None:intergenic | 50.0% | |
| GGCTTCTTTGCAGCAGGTAA+AGG | + | chr3.2:24607162-24607181 | None:intergenic | 50.0% | |
| GGTGGTGATCTGATCTTCAG+CGG | + | chr3.2:24606857-24606876 | None:intergenic | 50.0% | |
| TGACGATCCAACTCCTTCAG+AGG | + | chr3.2:24607052-24607071 | None:intergenic | 50.0% | |
| TTCCCTACTGGACAGGCTTT+GGG | - | chr3.2:24606955-24606974 | MS.gene38598:CDS | 50.0% | |
| ! | CACAAGCGTTGTCACTACGA+AGG | - | chr3.2:24606982-24607001 | MS.gene38598:CDS | 50.0% |
| ! | GTAACTGCCTCTGAAGGAGT+TGG | - | chr3.2:24607042-24607061 | MS.gene38598:CDS | 50.0% |
| ! | TCTTAACCTCCCGGCTTTTC+CGG | - | chr3.2:24607095-24607114 | MS.gene38598:CDS | 50.0% |
| !! | ACTGGCTTTGTGTCCACCTA+GGG | + | chr3.2:24606806-24606825 | None:intergenic | 50.0% |
| !! | GAAGCCCTGTCTTTTCAAGC+TGG | - | chr3.2:24607176-24607195 | MS.gene38598:CDS | 50.0% |
| AAAAGTCCGGAAAAGCCGGG+AGG | + | chr3.2:24607104-24607123 | None:intergenic | 55.0% | |
| AGACAGGGCTTCTTTGCAGC+AGG | + | chr3.2:24607168-24607187 | None:intergenic | 55.0% | |
| AGCGCTGTAACTGCCTCTGA+AGG | - | chr3.2:24607036-24607055 | MS.gene38598:CDS | 55.0% | |
| CAAAGCCTGTCCAGTAGGGA+AGG | + | chr3.2:24606956-24606975 | None:intergenic | 55.0% | |
| CTCATCATGCTTGCTCGCAG+CGG | - | chr3.2:24606676-24606695 | MS.gene38598:CDS | 55.0% | |
| CTCCCAAAGCCTGTCCAGTA+GGG | + | chr3.2:24606960-24606979 | None:intergenic | 55.0% | |
| CTGATCTTCAGCGGTGGTTG+CGG | + | chr3.2:24606848-24606867 | None:intergenic | 55.0% | |
| CTTACCGTTGGAAGCAGAGC+TGG | + | chr3.2:24606899-24606918 | None:intergenic | 55.0% | |
| CTTCCCTACTGGACAGGCTT+TGG | - | chr3.2:24606954-24606973 | MS.gene38598:CDS | 55.0% | |
| GGAAGCAGAGCTGGTAGTCA+CGG | + | chr3.2:24606890-24606909 | None:intergenic | 55.0% | |
| GGTGATCTGATCTTCAGCGG+TGG | + | chr3.2:24606854-24606873 | None:intergenic | 55.0% | |
| GTGGACACAAAGCCAGTCAC+CGG | - | chr3.2:24606809-24606828 | MS.gene38598:CDS | 55.0% | |
| TACAGCGCTACTTCCAGCAC+CGG | + | chr3.2:24607025-24607044 | None:intergenic | 55.0% | |
| TGTCACTACGAAGGCAGCGT+TGG | - | chr3.2:24606991-24607010 | MS.gene38598:CDS | 55.0% | |
| !! | GACTGGCTTTGTGTCCACCT+AGG | + | chr3.2:24606807-24606826 | None:intergenic | 55.0% |
| AGCAGAGCTGGTAGTCACGG+CGG | + | chr3.2:24606887-24606906 | None:intergenic | 60.0% | |
| AGTCACGGCGGATGAAGTGG+TGG | + | chr3.2:24606875-24606894 | None:intergenic | 60.0% | |
| CCTCCCAAAGCCTGTCCAGT+AGG | + | chr3.2:24606961-24606980 | None:intergenic | 60.0% | |
| GGTAGTCACGGCGGATGAAG+TGG | + | chr3.2:24606878-24606897 | None:intergenic | 60.0% | |
| !! | CCTACTGGACAGGCTTTGGG+AGG | - | chr3.2:24606958-24606977 | MS.gene38598:CDS | 60.0% |
| !! | TACGAAGGCAGCGTTGGTGC+CGG | - | chr3.2:24606997-24607016 | MS.gene38598:CDS | 60.0% |
| !! | GCTACTTCCAGCACCGGCAC+CGG | + | chr3.2:24607019-24607038 | None:intergenic | 65.0% |
| !! | GGCAGCGTTGGTGCCGGTGC+CGG | - | chr3.2:24607003-24607022 | MS.gene38598:CDS | 75.0% |
| !! | GTTGGTGCCGGTGCCGGTGC+TGG | - | chr3.2:24607009-24607028 | MS.gene38598:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 24606631 | 24607218 | 24606631 | ID=MS.gene38598 |
| chr3.2 | mRNA | 24606631 | 24607218 | 24606631 | ID=MS.gene38598.t1;Parent=MS.gene38598 |
| chr3.2 | exon | 24606631 | 24607218 | 24606631 | ID=MS.gene38598.t1.exon1;Parent=MS.gene38598.t1 |
| chr3.2 | CDS | 24606631 | 24607218 | 24606631 | ID=cds.MS.gene38598.t1;Parent=MS.gene38598.t1 |
| Gene Sequence |
| Protein sequence |
