Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39910.t1 | XP_013468580.1 | 92.4 | 553 | 42 | 0 | 1 | 553 | 1 | 553 | 2.90E-287 | 997.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39910.t1 | P27456 | 86.9 | 549 | 72 | 0 | 5 | 553 | 4 | 552 | 1.2e-273 | 943.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39910.t1 | A0A072VL94 | 92.4 | 553 | 42 | 0 | 1 | 553 | 1 | 553 | 2.1e-287 | 997.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene39910 | 0.804841 | 1.78E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene39910 | 0.837342 | 5.50E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene39910 | 0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene056609 | MS.gene39910 | 0.815428 | 9.29E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene39910 | 0.819099 | 1.39E-52 | -1.69E-46 |
| MS.gene057537 | MS.gene39910 | 0.837432 | 5.22E-57 | -1.69E-46 |
| MS.gene058082 | MS.gene39910 | 0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene058748 | MS.gene39910 | 0.826141 | 3.19E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene39910 | 0.800442 | 1.44E-48 | -1.69E-46 |
| MS.gene061051 | MS.gene39910 | -0.800477 | 1.42E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39910 | MS.gene053443 | PPI |
| MS.gene39910 | MS.gene67036 | PPI |
| MS.gene74672 | MS.gene39910 | PPI |
| MS.gene39910 | MS.gene073888 | PPI |
| MS.gene39910 | MS.gene65554 | PPI |
| MS.gene53517 | MS.gene39910 | PPI |
| MS.gene39910 | MS.gene019928 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39910.t1 | MTR_1g070505 | 97.830 | 553 | 12 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1111 |
| MS.gene39910.t1 | MTR_6g033515 | 53.878 | 477 | 213 | 5 | 66 | 536 | 16 | 491 | 3.14e-180 | 517 |
| MS.gene39910.t1 | MTR_6g033515 | 52.449 | 490 | 212 | 7 | 66 | 536 | 16 | 503 | 1.87e-175 | 505 |
| MS.gene39910.t1 | MTR_4g121880 | 33.068 | 502 | 293 | 15 | 48 | 521 | 54 | 540 | 4.52e-51 | 184 |
| MS.gene39910.t1 | MTR_2g034580 | 31.707 | 492 | 292 | 15 | 58 | 521 | 68 | 543 | 1.26e-48 | 177 |
| MS.gene39910.t1 | MTR_2g034580 | 31.707 | 492 | 292 | 15 | 58 | 521 | 68 | 543 | 2.57e-48 | 177 |
| MS.gene39910.t1 | MTR_4g123070 | 28.176 | 433 | 291 | 9 | 104 | 521 | 59 | 486 | 6.50e-46 | 169 |
| MS.gene39910.t1 | MTR_0644s0030 | 28.529 | 333 | 223 | 9 | 116 | 438 | 336 | 663 | 1.98e-30 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39910.t1 | AT3G54660 | 82.129 | 498 | 88 | 1 | 55 | 552 | 68 | 564 | 0.0 | 874 |
| MS.gene39910.t1 | AT3G24170 | 53.419 | 468 | 211 | 4 | 72 | 533 | 23 | 489 | 8.02e-177 | 508 |
| MS.gene39910.t1 | AT3G24170 | 53.419 | 468 | 211 | 4 | 72 | 533 | 23 | 489 | 8.02e-177 | 508 |
| MS.gene39910.t1 | AT3G24170 | 53.419 | 468 | 211 | 4 | 72 | 533 | 23 | 489 | 8.02e-177 | 508 |
| MS.gene39910.t1 | AT3G16950 | 32.819 | 518 | 297 | 19 | 36 | 521 | 46 | 544 | 4.77e-50 | 181 |
| MS.gene39910.t1 | AT3G16950 | 32.819 | 518 | 297 | 19 | 36 | 521 | 46 | 544 | 1.53e-49 | 181 |
| MS.gene39910.t1 | AT4G16155 | 31.532 | 555 | 320 | 18 | 3 | 521 | 11 | 541 | 2.58e-48 | 177 |
| MS.gene39910.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.68e-42 | 159 |
| MS.gene39910.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.68e-42 | 159 |
| MS.gene39910.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.68e-42 | 159 |
| MS.gene39910.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.68e-42 | 159 |
| MS.gene39910.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.68e-42 | 159 |
| MS.gene39910.t1 | AT3G17240 | 28.082 | 438 | 287 | 10 | 103 | 521 | 63 | 491 | 1.33e-41 | 157 |
| MS.gene39910.t1 | AT3G17240 | 28.082 | 438 | 287 | 10 | 103 | 521 | 63 | 491 | 1.33e-41 | 157 |
Find 147 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCGCTTTGCCTCGAATTT+TGG | 0.136844 | 1.4:+57901739 | MS.gene39910:CDS |
| CCACTGAAGGCCACCCTCTC+TGG | 0.136948 | 1.4:+57905939 | MS.gene39910:CDS |
| GAGTTTGCTGGTATCTTTAA+TGG | 0.157959 | 1.4:+57903758 | MS.gene39910:CDS |
| AAACATCGGTTCCTTCAATT+TGG | 0.171733 | 1.4:+57904885 | MS.gene39910:CDS |
| GGTGAAGAAGAGTGTGTTTC+GGG | 0.200443 | 1.4:-57901530 | None:intergenic |
| ACAATTTCACTGCAGAATTT+AGG | 0.226558 | 1.4:+57904718 | MS.gene39910:intron |
| AAACTTCATACCTTAGTATT+AGG | 0.232538 | 1.4:-57904097 | None:intergenic |
| AGAGTGAAGGAGCGAGAAAA+TGG | 0.259312 | 1.4:-57901562 | None:intergenic |
| GCTGAGTTGCAGAGGCTTAC+TGG | 0.274604 | 1.4:+57903377 | MS.gene39910:CDS |
| TTTGAAGAAAGCAATGGTTT+TGG | 0.285225 | 1.4:+57903296 | MS.gene39910:CDS |
| TCTCACTCCAGTTGCTTTGA+TGG | 0.293228 | 1.4:+57904937 | MS.gene39910:CDS |
| GGGGAGGGGATTGAGATATT+AGG | 0.293831 | 1.4:-57901609 | None:intergenic |
| TACATTGCCTTGGAGTTTGC+TGG | 0.310725 | 1.4:+57903746 | MS.gene39910:CDS |
| TCTATTGCATATTCCTTTCC+AGG | 0.317991 | 1.4:-57903662 | None:intergenic |
| CCCTTCATTCCTGATATTCC+TGG | 0.322317 | 1.4:+57903644 | MS.gene39910:CDS |
| CCCTCTCTGGGCTTCCAGAC+CGG | 0.323993 | 1.4:+57905952 | MS.gene39910:CDS |
| TATTCCTTTCCAGGAATATC+AGG | 0.334157 | 1.4:-57903653 | None:intergenic |
| AGCGAAGGTGCGGCGGGGAG+GGG | 0.337776 | 1.4:-57901623 | None:intergenic |
| GAGTGTGTTTCGGGTAAGTA+AGG | 0.338722 | 1.4:-57901521 | None:intergenic |
| GGATTGAGATATTAGGGTTT+TGG | 0.346965 | 1.4:-57901602 | None:intergenic |
| AACATCGGTTCCTTCAATTT+GGG | 0.350449 | 1.4:+57904886 | MS.gene39910:CDS |
| AGCCAACAAAACCTGATTAT+AGG | 0.353075 | 1.4:+57904996 | MS.gene39910:CDS |
| GGCACGGACACCTCCGCTTC+CGG | 0.362669 | 1.4:-57901716 | None:intergenic |
| CCTCTCTGGGCTTCCAGACC+GGG | 0.370019 | 1.4:+57905953 | MS.gene39910:CDS |
| CCAACAATGGCAATCTTCTC+AGG | 0.371658 | 1.4:-57903716 | None:intergenic |
| GGGAGGGGATTGAGATATTA+GGG | 0.373364 | 1.4:-57901608 | None:intergenic |
| CACTGAAGGCCACCCTCTCT+GGG | 0.374084 | 1.4:+57905940 | MS.gene39910:CDS |
| AATGTATATTACCTATAATC+AGG | 0.374502 | 1.4:-57905007 | None:intergenic |
| AACTCCTCCAATTGGTGGTT+GGG | 0.383902 | 1.4:-57905745 | None:intergenic |
| ACAGCGAAGGTGCGGCGGGG+AGG | 0.385464 | 1.4:-57901625 | None:intergenic |
| GCATAGACGAGTAATTTCTT+TGG | 0.399267 | 1.4:-57903254 | None:intergenic |
| TTCCGGCACCGATGGTAAAA+AGG | 0.400621 | 1.4:-57901699 | None:intergenic |
| ACCATCCACGGTACCTTTGC+TGG | 0.403218 | 1.4:-57904041 | None:intergenic |
| TGGTGAAGAAGAGTGTGTTT+CGG | 0.414409 | 1.4:-57901531 | None:intergenic |
| AACTGAAACTAAAATGTGTT+TGG | 0.416281 | 1.4:-57903612 | None:intergenic |
| CAGCGAAGGTGCGGCGGGGA+GGG | 0.417528 | 1.4:-57901624 | None:intergenic |
| CTACAGGAGACTCCTCAGTA+TGG | 0.424734 | 1.4:-57903979 | None:intergenic |
| GAGTGAAGGAGCGAGAAAAT+GGG | 0.424845 | 1.4:-57901561 | None:intergenic |
| CCTCACACAGTTGATGTTGA+TGG | 0.426893 | 1.4:+57903575 | MS.gene39910:CDS |
| TTCTGGGTTTGCACATGTGT+GGG | 0.429264 | 1.4:+57906015 | MS.gene39910:CDS |
| TCTAATGTCAAGTTGATTGA+AGG | 0.429954 | 1.4:+57903425 | MS.gene39910:CDS |
| CTTGATTTACCTGTGAATCA+AGG | 0.431951 | 1.4:-57906273 | None:intergenic |
| ACTCCCTCCATCAAAGCAAC+TGG | 0.439081 | 1.4:-57904944 | None:intergenic |
| GTTCCTTCAATTTGGGCAAT+CGG | 0.441096 | 1.4:+57904893 | MS.gene39910:CDS |
| TTTGCAGTTGCTATTAAAGC+TGG | 0.444400 | 1.4:+57906151 | MS.gene39910:CDS |
| GCACAGGCTGTAGAACAATA+TGG | 0.445183 | 1.4:+57905885 | MS.gene39910:intron |
| TTTACCATCGGTGCCGGAAG+CGG | 0.452329 | 1.4:+57901703 | MS.gene39910:CDS |
| TCTCATATTATGTTTGCTAC+AGG | 0.452576 | 1.4:+57904067 | MS.gene39910:CDS |
| ACAGTGAACCTAAGCATGAT+TGG | 0.455004 | 1.4:+57903330 | MS.gene39910:CDS |
| TGTATTTATACGACAAAAGC+AGG | 0.455244 | 1.4:+57903799 | MS.gene39910:CDS |
| CCTGAGAAGATTGCCATTGT+TGG | 0.456099 | 1.4:+57903716 | MS.gene39910:CDS |
| TCGAAAGAGCCTTGATTCAC+AGG | 0.456430 | 1.4:+57906264 | MS.gene39910:CDS |
| CGCGGACAGCGAAGGTGCGG+CGG | 0.457016 | 1.4:-57901630 | None:intergenic |
| AGGACGCAAACCTAATACTA+AGG | 0.462907 | 1.4:+57904087 | MS.gene39910:CDS |
| GCGGACAGCGAAGGTGCGGC+GGG | 0.464036 | 1.4:-57901629 | None:intergenic |
| TCTCCGATTGCCCAAATTGA+AGG | 0.476874 | 1.4:-57904896 | None:intergenic |
| ACTCCAGTTGCTTTGATGGA+GGG | 0.482584 | 1.4:+57904941 | MS.gene39910:CDS |
| AGTTGGTCTCACAGAGGAGC+AGG | 0.483401 | 1.4:+57905764 | MS.gene39910:CDS |
| TCCAGGAATATCAGGAATGA+AGG | 0.485140 | 1.4:-57903645 | None:intergenic |
| GTGAGACCAACTCCTCCAAT+TGG | 0.485622 | 1.4:-57905753 | None:intergenic |
| AAACTACTCCAATCATGCTT+AGG | 0.489785 | 1.4:-57903338 | None:intergenic |
| ACAAACTCCTCAGCTGCGGT+TGG | 0.490186 | 1.4:-57906214 | None:intergenic |
| AGTTGCTTTGATGGAGGGAG+TGG | 0.491872 | 1.4:+57904946 | MS.gene39910:CDS |
| CAATCGGAGATGCTACAAAC+AGG | 0.496018 | 1.4:+57904909 | MS.gene39910:CDS |
| CAAACTCCTCAGCTGCGGTT+GGG | 0.497195 | 1.4:-57906213 | None:intergenic |
| CAACCACCAATTGGAGGAGT+TGG | 0.497734 | 1.4:+57905747 | MS.gene39910:CDS |
| GTGTTCTCCCAACCACCAAT+TGG | 0.499772 | 1.4:+57905738 | MS.gene39910:CDS |
| AAAGCAATATTGTTAAGTTC+CGG | 0.508995 | 1.4:-57906820 | None:intergenic |
| TTCACTGCAGAATTTAGGAC+TGG | 0.509056 | 1.4:+57904723 | MS.gene39910:intron |
| GGTTGGGAGAACACAGCAGC+AGG | 0.513851 | 1.4:-57905729 | None:intergenic |
| CTTCCTAGTGGGAGTCCTCA+TGG | 0.514013 | 1.4:-57906239 | None:intergenic |
| GAGAGAAGGTGTGAGAGTGA+AGG | 0.516201 | 1.4:-57901575 | None:intergenic |
| ACCTCCGCTTCCGGCACCGA+TGG | 0.516522 | 1.4:-57901707 | None:intergenic |
| CACGAATTTGAAGAAAGCAA+TGG | 0.518983 | 1.4:+57903290 | MS.gene39910:CDS |
| CAACTCCTCCAATTGGTGGT+TGG | 0.519267 | 1.4:-57905746 | None:intergenic |
| CATTCCTGATATTCCTGGAA+AGG | 0.522049 | 1.4:+57903649 | MS.gene39910:CDS |
| CACTCCAGTTGCTTTGATGG+AGG | 0.522427 | 1.4:+57904940 | MS.gene39910:CDS |
| CGATTCAGCGCGGACAGCGA+AGG | 0.522983 | 1.4:-57901638 | None:intergenic |
| TAAGGGAGAAGAACAAGAGA+GGG | 0.523490 | 1.4:-57901503 | None:intergenic |
| AGCGTTAGCACCAAAATTCG+AGG | 0.532582 | 1.4:-57901749 | None:intergenic |
| GTTCTGGGTTTGCACATGTG+TGG | 0.535374 | 1.4:+57906014 | MS.gene39910:CDS |
| AGAAGATTGCCATTGTTGGT+GGG | 0.539271 | 1.4:+57903720 | MS.gene39910:CDS |
| CCAGAGAGGGTGGCCTTCAG+TGG | 0.541109 | 1.4:-57905939 | None:intergenic |
| TGATGCTCCTGAAATTGTGC+AGG | 0.541563 | 1.4:+57906040 | MS.gene39910:CDS |
| GCTGCCTTAGTGATAGCTAC+AGG | 0.541775 | 1.4:-57903995 | None:intergenic |
| GAGAAGATTGCCATTGTTGG+TGG | 0.542063 | 1.4:+57903719 | MS.gene39910:CDS |
| TGCTAAAGATGGATCAATAG+AGG | 0.542879 | 1.4:+57904765 | MS.gene39910:CDS |
| AATTTAGGACTGGAGTCTGT+TGG | 0.543197 | 1.4:+57904733 | MS.gene39910:CDS |
| GAAGATTGCCATTGTTGGTG+GGG | 0.543504 | 1.4:+57903721 | MS.gene39910:CDS |
| GTCAAGTTGATTGAAGGCCG+TGG | 0.546121 | 1.4:+57903431 | MS.gene39910:CDS |
| GTCTGGAAGCCCAGAGAGGG+TGG | 0.547984 | 1.4:-57905949 | None:intergenic |
| ACCATCGGTGCCGGAAGCGG+AGG | 0.550091 | 1.4:+57901706 | MS.gene39910:CDS |
| ACAATCTCATCGGATACCAC+TGG | 0.553720 | 1.4:+57901796 | MS.gene39910:CDS |
| CTCACACAGTTGATGTTGAT+GGG | 0.555032 | 1.4:+57903576 | MS.gene39910:CDS |
| CTCTTTCGAATCTTCCTAGT+GGG | 0.556074 | 1.4:-57906250 | None:intergenic |
| GTAAGGGAGAAGAACAAGAG+AGG | 0.557001 | 1.4:-57901504 | None:intergenic |
| AGTGTGTTTCGGGTAAGTAA+GGG | 0.562967 | 1.4:-57901520 | None:intergenic |
| CTCTCTTTAAAGACCAGCAA+AGG | 0.565512 | 1.4:+57904028 | MS.gene39910:CDS |
| TCGAAGTCATAGTGGCCGGT+GGG | 0.568371 | 1.4:-57901676 | None:intergenic |
| ACCAGCAAAGGTACCGTGGA+TGG | 0.570642 | 1.4:+57904040 | MS.gene39910:CDS |
| ACTAATGAAGCAAGCAGCAA+TGG | 0.570686 | 1.4:+57901468 | None:intergenic |
| GTTGATTGAAGGCCGTGGAA+AGG | 0.572186 | 1.4:+57903436 | MS.gene39910:CDS |
| TCTGAAGCAAAAGCTGTAGC+CGG | 0.574037 | 1.4:+57906801 | MS.gene39910:CDS |
| AAGATTGCCATTGTTGGTGG+GGG | 0.574113 | 1.4:+57903722 | MS.gene39910:CDS |
| AGTGGTATCCGATGAGATTG+TGG | 0.577551 | 1.4:-57901794 | None:intergenic |
| GGTGTGAAGATTGCTAAAGA+TGG | 0.580574 | 1.4:+57904754 | MS.gene39910:CDS |
| GTCCGCGCTGAATCGCAAAA+CGG | 0.581424 | 1.4:+57901646 | MS.gene39910:CDS |
| GCAGAAAATATGGCTCTAAG+AGG | 0.582671 | 1.4:+57903947 | MS.gene39910:CDS |
| CAGCGCGGACAGCGAAGGTG+CGG | 0.586569 | 1.4:-57901633 | None:intergenic |
| CCGGTCTGGAAGCCCAGAGA+GGG | 0.587282 | 1.4:-57905952 | None:intergenic |
| TCCGTTCTCCACAATCTCAT+CGG | 0.587909 | 1.4:+57901786 | MS.gene39910:CDS |
| TCGGATACCACTGGAGGTGT+CGG | 0.588150 | 1.4:+57901805 | MS.gene39910:CDS |
| TCCGATGAGATTGTGGAGAA+CGG | 0.588939 | 1.4:-57901787 | None:intergenic |
| CATTCACCCAACCGCAGCTG+AGG | 0.593036 | 1.4:+57906207 | MS.gene39910:CDS |
| CAAAACGGCGTCGACCCCAC+CGG | 0.597893 | 1.4:+57901661 | MS.gene39910:CDS |
| GTCGAAGTCATAGTGGCCGG+TGG | 0.598180 | 1.4:-57901677 | None:intergenic |
| TTCTCCCAACCACCAATTGG+AGG | 0.598183 | 1.4:+57905741 | MS.gene39910:CDS |
| CGAAGTCATAGTGGCCGGTG+GGG | 0.602265 | 1.4:-57901675 | None:intergenic |
| GCAGACTTTGATGCTACTGT+AGG | 0.605910 | 1.4:+57906184 | MS.gene39910:CDS |
| AAGGTCGAAGTCATAGTGGC+CGG | 0.610590 | 1.4:-57901680 | None:intergenic |
| GTCTCCTGTAGCTATCACTA+AGG | 0.610701 | 1.4:+57903991 | MS.gene39910:CDS |
| TCACCATGAGGACTCCCACT+AGG | 0.611633 | 1.4:+57906236 | MS.gene39910:CDS |
| TCTGGGTTTGCACATGTGTG+GGG | 0.615085 | 1.4:+57906016 | MS.gene39910:CDS |
| TTTGCGAGGATTTGATGAAG+AGG | 0.617316 | 1.4:+57903823 | MS.gene39910:CDS |
| AGAATCATCCCACCTTTCCA+CGG | 0.618295 | 1.4:-57903448 | None:intergenic |
| AAAGATACCAGCAAACTCCA+AGG | 0.619374 | 1.4:-57903753 | None:intergenic |
| TATTAAAGCTGGATTGACAA+AGG | 0.619694 | 1.4:+57906162 | MS.gene39910:CDS |
| CCAGGAATATCAGGAATGAA+GGG | 0.621948 | 1.4:-57903644 | None:intergenic |
| CCATCAACATCAACTGTGTG+AGG | 0.629501 | 1.4:-57903575 | None:intergenic |
| TGATGAATACTCTCAAACAT+CGG | 0.635283 | 1.4:+57904871 | MS.gene39910:CDS |
| GCTATCACTAAGGCAGCTGA+TGG | 0.636893 | 1.4:+57904001 | MS.gene39910:CDS |
| AGACCAACTCCTCCAATTGG+TGG | 0.641871 | 1.4:-57905750 | None:intergenic |
| TCGAGGCAAAGCGAGAGGCA+CGG | 0.642072 | 1.4:-57901732 | None:intergenic |
| AAAATTCGAGGCAAAGCGAG+AGG | 0.642593 | 1.4:-57901737 | None:intergenic |
| CGGACAGCGAAGGTGCGGCG+GGG | 0.644049 | 1.4:-57901628 | None:intergenic |
| GATACCACTGGAGGTGTCGG+CGG | 0.663722 | 1.4:+57901808 | MS.gene39910:CDS |
| GGTGACAAACTCCTCAGCTG+CGG | 0.664472 | 1.4:-57906218 | None:intergenic |
| GCTCTTTCGAATCTTCCTAG+TGG | 0.665678 | 1.4:-57906251 | None:intergenic |
| ATCTCATCGGATACCACTGG+AGG | 0.668382 | 1.4:+57901799 | MS.gene39910:CDS |
| CGTGCCGCCGACACCTCCAG+TGG | 0.675915 | 1.4:-57901812 | None:intergenic |
| AAAGACCAGCAAAGGTACCG+TGG | 0.688890 | 1.4:+57904036 | MS.gene39910:CDS |
| CTGAGGAGTTTGTCACCATG+AGG | 0.689480 | 1.4:+57906224 | MS.gene39910:CDS |
| CCCGGTCTGGAAGCCCAGAG+AGG | 0.691224 | 1.4:-57905953 | None:intergenic |
| AGGTATTGAATTCCATACTG+AGG | 0.697204 | 1.4:+57903967 | MS.gene39910:CDS |
| AATATGAGAGAAACCATCCA+CGG | 0.716565 | 1.4:-57904053 | None:intergenic |
| TTGTGCAGCTGTGTAATACG+TGG | 0.758121 | 1.4:+57903224 | MS.gene39910:intron |
| TGGAGGAGTTGGTCTCACAG+AGG | 0.772688 | 1.4:+57905758 | MS.gene39910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTAATATATTCTA+GGG | + | chr1.4:57906768-57906787 | MS.gene39910:intron | 10.0% |
| !! | AAATGAATTAAGTATCATAT+TGG | - | chr1.4:57906567-57906586 | None:intergenic | 15.0% |
| !! | AATATGATACTTAATTCATT+TGG | + | chr1.4:57906566-57906585 | MS.gene39910:intron | 15.0% |
| !! | ATATGATACTTAATTCATTT+GGG | + | chr1.4:57906567-57906586 | MS.gene39910:intron | 15.0% |
| !! | TTTCCATATTTATCAAAATT+AGG | + | chr1.4:57904511-57904530 | MS.gene39910:intron | 15.0% |
| !!! | ATTATGATTTACTAACATTT+TGG | + | chr1.4:57905856-57905875 | MS.gene39910:intron | 15.0% |
| !!! | GATTTTTTGTATTGATTATT+AGG | + | chr1.4:57902734-57902753 | MS.gene39910:intron | 15.0% |
| !!! | GTTTTGTTTTAATATATTCT+AGG | + | chr1.4:57906767-57906786 | MS.gene39910:intron | 15.0% |
| !!! | TTTTAGCATATGAAATAATT+TGG | + | chr1.4:57904236-57904255 | MS.gene39910:intron | 15.0% |
| !!! | TTTTCTAAAAAATTTCGTAA+TGG | + | chr1.4:57906742-57906761 | MS.gene39910:intron | 15.0% |
| !!! | TTTTTCTCTGAAAAAAAAAA+TGG | - | chr1.4:57902643-57902662 | None:intergenic | 15.0% |
| !! | AATGATATATGGTACAAAAT+TGG | + | chr1.4:57906621-57906640 | MS.gene39910:intron | 20.0% |
| !! | AATGTATATTACCTATAATC+AGG | - | chr1.4:57905010-57905029 | None:intergenic | 20.0% |
| !! | ACAAGCATTAAAAATTGATT+TGG | + | chr1.4:57905170-57905189 | MS.gene39910:intron | 20.0% |
| !! | ATGATATATGGTACAAAATT+GGG | + | chr1.4:57906622-57906641 | MS.gene39910:intron | 20.0% |
| !! | ATTCATATGGAAATGATATA+TGG | + | chr1.4:57906610-57906629 | MS.gene39910:intron | 20.0% |
| !! | ATTCATGTAATATTAAGCAA+GGG | - | chr1.4:57904465-57904484 | None:intergenic | 20.0% |
| !! | CTGTGAAATTAACTAAAAAA+CGG | - | chr1.4:57901872-57901891 | None:intergenic | 20.0% |
| !! | TACATTCAATAGATAGTTAA+TGG | - | chr1.4:57903092-57903111 | None:intergenic | 20.0% |
| !! | TATTCATGTAATATTAAGCA+AGG | - | chr1.4:57904466-57904485 | None:intergenic | 20.0% |
| !! | TCATTTGTAGATATATTGAA+TGG | + | chr1.4:57905627-57905646 | MS.gene39910:intron | 20.0% |
| !! | TTACAAAGCTATTTATTACA+TGG | - | chr1.4:57903486-57903505 | None:intergenic | 20.0% |
| !!! | ATTTGAATAACCAACTTTTT+AGG | + | chr1.4:57902261-57902280 | MS.gene39910:intron | 20.0% |
| !!! | GTTCCTAATTTTGATAAATA+TGG | - | chr1.4:57904517-57904536 | None:intergenic | 20.0% |
| !!! | TAGTGCTTATAATCTTTTTT+TGG | - | chr1.4:57904200-57904219 | None:intergenic | 20.0% |
| !!! | TCAAACAATTTTTAAACTGT+TGG | - | chr1.4:57902900-57902919 | None:intergenic | 20.0% |
| ! | AAACTTCATACCTTAGTATT+AGG | - | chr1.4:57904100-57904119 | None:intergenic | 25.0% |
| ! | AAATTAACCACCTAAAAAGT+TGG | - | chr1.4:57902274-57902293 | None:intergenic | 25.0% |
| ! | AACTGAAACTAAAATGTGTT+TGG | - | chr1.4:57903615-57903634 | None:intergenic | 25.0% |
| ! | AGATAAACAGATAGTTGAAA+CGG | - | chr1.4:57904648-57904667 | None:intergenic | 25.0% |
| ! | AGATGTTGTTAATATGATGT+GGG | + | chr1.4:57901959-57901978 | MS.gene39910:intron | 25.0% |
| ! | AGCATATGAAATAATTTGGA+GGG | + | chr1.4:57904240-57904259 | MS.gene39910:intron | 25.0% |
| ! | AGCTATTTATTACATGGAAA+TGG | - | chr1.4:57903480-57903499 | None:intergenic | 25.0% |
| ! | ATTATAAATGGTTAAGCAGT+TGG | - | chr1.4:57905130-57905149 | None:intergenic | 25.0% |
| ! | GTTAATTTAGTTGAAACATG+TGG | + | chr1.4:57902286-57902305 | MS.gene39910:intron | 25.0% |
| ! | GTTAGAAGAACACATATATT+AGG | + | chr1.4:57902524-57902543 | MS.gene39910:intron | 25.0% |
| ! | TAATGAGAACGTTGTAAAAA+TGG | + | chr1.4:57902050-57902069 | MS.gene39910:intron | 25.0% |
| ! | TAGCATATGAAATAATTTGG+AGG | + | chr1.4:57904239-57904258 | MS.gene39910:intron | 25.0% |
| ! | TCATGAAAGTTGTTCAAATT+TGG | + | chr1.4:57903154-57903173 | MS.gene39910:intron | 25.0% |
| ! | TGGCTAATAACATGATATTA+TGG | + | chr1.4:57902076-57902095 | MS.gene39910:intron | 25.0% |
| ! | TTCATGTAATATTAAGCAAG+GGG | - | chr1.4:57904464-57904483 | None:intergenic | 25.0% |
| ! | TTCTGATTGAAGGTAATTAT+TGG | - | chr1.4:57904286-57904305 | None:intergenic | 25.0% |
| !! | AAATTCGTGAGAAAATTTTG+AGG | - | chr1.4:57903279-57903298 | None:intergenic | 25.0% |
| !! | AACTTTCATGACAACTTTTA+AGG | - | chr1.4:57903145-57903164 | None:intergenic | 25.0% |
| !! | AAGATTTTGCATGATAAACA+GGG | + | chr1.4:57906127-57906146 | MS.gene39910:intron | 25.0% |
| !! | ATTTTCCAAAAACCAAATAC+GGG | - | chr1.4:57902867-57902886 | None:intergenic | 25.0% |
| !! | CATTTTCCAAAAACCAAATA+CGG | - | chr1.4:57902868-57902887 | None:intergenic | 25.0% |
| !! | CTATTAGTTTCATAAAAACC+CGG | - | chr1.4:57905974-57905993 | None:intergenic | 25.0% |
| !! | TAAGATTTTGCATGATAAAC+AGG | + | chr1.4:57906126-57906145 | MS.gene39910:intron | 25.0% |
| !! | TTACACCATTGTTTCTTAAA+TGG | + | chr1.4:57905339-57905358 | MS.gene39910:intron | 25.0% |
| !!! | AAACACATTTTAGTTTCAGT+TGG | + | chr1.4:57903614-57903633 | MS.gene39910:CDS | 25.0% |
| !!! | GCTAAAAGAGTATTTTCTTT+TGG | - | chr1.4:57904223-57904242 | None:intergenic | 25.0% |
| !!! | TTGTATTGATTATTAGGAGT+GGG | + | chr1.4:57902740-57902759 | MS.gene39910:intron | 25.0% |
| !!! | TTTGTATTGATTATTAGGAG+TGG | + | chr1.4:57902739-57902758 | MS.gene39910:intron | 25.0% |
| !!! | TTTTAAGAGAAGCATTTCTT+TGG | + | chr1.4:57902669-57902688 | MS.gene39910:intron | 25.0% |
| AACACGAGAATTAAGAAAGT+TGG | + | chr1.4:57902406-57902425 | MS.gene39910:intron | 30.0% | |
| AATCTCATTAACCACGTATT+TGG | - | chr1.4:57903053-57903072 | None:intergenic | 30.0% | |
| AATGTTTAACCAAAGCGAAA+AGG | - | chr1.4:57902201-57902220 | None:intergenic | 30.0% | |
| ACAATTTCACTGCAGAATTT+AGG | + | chr1.4:57904718-57904737 | MS.gene39910:intron | 30.0% | |
| ACCACATGTCATTATTCATA+TGG | + | chr1.4:57906597-57906616 | MS.gene39910:intron | 30.0% | |
| ACTGAAGTCAATCTTTAATC+AGG | - | chr1.4:57905055-57905074 | None:intergenic | 30.0% | |
| AGAAGAACACATATATTAGG+AGG | + | chr1.4:57902527-57902546 | MS.gene39910:intron | 30.0% | |
| AGAATGTAACACAATCTGTT+AGG | - | chr1.4:57905691-57905710 | None:intergenic | 30.0% | |
| AGCAAATTAGCAAGTCAATA+AGG | - | chr1.4:57902178-57902197 | None:intergenic | 30.0% | |
| AGTTGAACACCTGAAAATTA+TGG | + | chr1.4:57903017-57903036 | MS.gene39910:intron | 30.0% | |
| ATCAGGGAGATCATTATAAA+TGG | - | chr1.4:57905142-57905161 | None:intergenic | 30.0% | |
| ATCTCATTAACCACGTATTT+GGG | - | chr1.4:57903052-57903071 | None:intergenic | 30.0% | |
| ATGTGGTTAATCATGGTATA+TGG | + | chr1.4:57902303-57902322 | MS.gene39910:intron | 30.0% | |
| ATTTCTGCACAAGATATCAA+CGG | - | chr1.4:57906318-57906337 | None:intergenic | 30.0% | |
| CAATCAGAAAGTCATTGAAA+AGG | + | chr1.4:57904297-57904316 | MS.gene39910:intron | 30.0% | |
| CACATCATATTAACAACATC+TGG | - | chr1.4:57901960-57901979 | None:intergenic | 30.0% | |
| CAGATGTTGTTAATATGATG+TGG | + | chr1.4:57901958-57901977 | MS.gene39910:intron | 30.0% | |
| CTAAGAGAACCATAAAAACA+TGG | - | chr1.4:57906708-57906727 | None:intergenic | 30.0% | |
| CTCTCTATGATGAAATCATT+GGG | - | chr1.4:57902484-57902503 | None:intergenic | 30.0% | |
| CTTGACCATTTAAGAAACAA+TGG | - | chr1.4:57905347-57905366 | None:intergenic | 30.0% | |
| CTTTAATGGTTTAAAAGAGG+TGG | + | chr1.4:57905411-57905430 | MS.gene39910:intron | 30.0% | |
| GAACGTTGTAAAAATGGAAT+TGG | + | chr1.4:57902056-57902075 | MS.gene39910:intron | 30.0% | |
| GATTGAAGGTAATTATTGGA+AGG | - | chr1.4:57904282-57904301 | None:intergenic | 30.0% | |
| GCAAAAACAAATGAAGTTCT+GGG | + | chr1.4:57905999-57906018 | MS.gene39910:CDS | 30.0% | |
| TAATCATGGTATATGGTTCA+TGG | + | chr1.4:57902310-57902329 | MS.gene39910:intron | 30.0% | |
| TACAGAAAGAGCTAATAACA+TGG | + | chr1.4:57904677-57904696 | MS.gene39910:intron | 30.0% | |
| TATTAAAGCTGGATTGACAA+AGG | + | chr1.4:57906162-57906181 | MS.gene39910:CDS | 30.0% | |
| TCCATATGAATAATGACATG+TGG | - | chr1.4:57906601-57906620 | None:intergenic | 30.0% | |
| TCTTTCAATTCTCAAGTACA+AGG | - | chr1.4:57906416-57906435 | None:intergenic | 30.0% | |
| TGATGAATACTCTCAAACAT+CGG | + | chr1.4:57904871-57904890 | MS.gene39910:CDS | 30.0% | |
| TGCAAAAACAAATGAAGTTC+TGG | + | chr1.4:57905998-57906017 | MS.gene39910:CDS | 30.0% | |
| TGTATTTATACGACAAAAGC+AGG | + | chr1.4:57903799-57903818 | MS.gene39910:CDS | 30.0% | |
| TTAAGATTTGAACACTAGAC+TGG | + | chr1.4:57902555-57902574 | MS.gene39910:intron | 30.0% | |
| TTCAATGACTTTCTGATTGA+AGG | - | chr1.4:57904296-57904315 | None:intergenic | 30.0% | |
| TTGAAACATGTGGTTAATCA+TGG | + | chr1.4:57902296-57902315 | MS.gene39910:intron | 30.0% | |
| ! | AAGTCCTAAAAGTGTATCAT+GGG | - | chr1.4:57904403-57904422 | None:intergenic | 30.0% |
| ! | AGATTTTGCATGATAAACAG+GGG | + | chr1.4:57906128-57906147 | MS.gene39910:intron | 30.0% |
| ! | AGATTTTGTCGCAGAAAATA+TGG | + | chr1.4:57903937-57903956 | MS.gene39910:CDS | 30.0% |
| ! | GAGCTTTAATGGTTTAAAAG+AGG | + | chr1.4:57905408-57905427 | MS.gene39910:intron | 30.0% |
| ! | GTTTTTGACACGAATTTGTA+TGG | + | chr1.4:57905282-57905301 | MS.gene39910:intron | 30.0% |
| ! | TCTCATATTATGTTTGCTAC+AGG | + | chr1.4:57904067-57904086 | MS.gene39910:CDS | 30.0% |
| ! | TTTGAAGAAAGCAATGGTTT+TGG | + | chr1.4:57903296-57903315 | MS.gene39910:CDS | 30.0% |
| ! | TTTTCCCATGATACACTTTT+AGG | + | chr1.4:57904396-57904415 | MS.gene39910:intron | 30.0% |
| !! | AGGTTTTGATGGTAAATCAA+GGG | - | chr1.4:57903699-57903718 | None:intergenic | 30.0% |
| !! | ATTCTCGTGTTTTTGTCAAA+TGG | - | chr1.4:57902397-57902416 | None:intergenic | 30.0% |
| !! | CATTTCCAACCATGTTTTTA+TGG | + | chr1.4:57906696-57906715 | MS.gene39910:intron | 30.0% |
| !! | TACCTATAATCAGGTTTTGT+TGG | - | chr1.4:57905001-57905020 | None:intergenic | 30.0% |
| !! | TCTAATGTCAAGTTGATTGA+AGG | + | chr1.4:57903425-57903444 | MS.gene39910:CDS | 30.0% |
| !! | TGAATAACCAACTTTTTAGG+TGG | + | chr1.4:57902264-57902283 | MS.gene39910:intron | 30.0% |
| !! | TTCTCGTGTTTTTGTCAAAT+GGG | - | chr1.4:57902396-57902415 | None:intergenic | 30.0% |
| !! | TTTCATGACAACTTTTAAGG+TGG | - | chr1.4:57903142-57903161 | None:intergenic | 30.0% |
| !!! | AACATTTTGGTTATTTGCAC+AGG | + | chr1.4:57905869-57905888 | MS.gene39910:intron | 30.0% |
| !!! | CGTATTTGGTTTTTGGAAAA+TGG | + | chr1.4:57902866-57902885 | MS.gene39910:intron | 30.0% |
| AAAACCAAATACGGGATAAC+CGG | - | chr1.4:57902859-57902878 | None:intergenic | 35.0% | |
| AAACTACTCCAATCATGCTT+AGG | - | chr1.4:57903341-57903360 | None:intergenic | 35.0% | |
| AATATGAGAGAAACCATCCA+CGG | - | chr1.4:57904056-57904075 | None:intergenic | 35.0% | |
| AATTCCACATGCTTCTTAGT+TGG | + | chr1.4:57904574-57904593 | MS.gene39910:intron | 35.0% | |
| AATTCTCAAGTACAAGGCAA+CGG | - | chr1.4:57906410-57906429 | None:intergenic | 35.0% | |
| ACAAAAACCTGCACAATTTC+AGG | - | chr1.4:57906050-57906069 | None:intergenic | 35.0% | |
| AGCCAACAAAACCTGATTAT+AGG | + | chr1.4:57904996-57905015 | MS.gene39910:CDS | 35.0% | |
| ATAAAAATGCTGAGTTGCAG+AGG | + | chr1.4:57903369-57903388 | MS.gene39910:CDS | 35.0% | |
| ATGTAACACAATCTGTTAGG+AGG | - | chr1.4:57905688-57905707 | None:intergenic | 35.0% | |
| ATTGAATGGCAGCTATAATC+TGG | + | chr1.4:57905641-57905660 | MS.gene39910:intron | 35.0% | |
| ATTGTTTGAGAGTTTGAGAG+AGG | + | chr1.4:57902911-57902930 | MS.gene39910:intron | 35.0% | |
| CACAAAGATATGCATGTAGA+TGG | - | chr1.4:57903209-57903228 | None:intergenic | 35.0% | |
| CACGAATTTGAAGAAAGCAA+TGG | + | chr1.4:57903290-57903309 | MS.gene39910:CDS | 35.0% | |
| CAGAAGATCATTGATCTCAA+TGG | - | chr1.4:57905814-57905833 | None:intergenic | 35.0% | |
| CTACCCTTGTCTCTAAATAT+AGG | + | chr1.4:57902368-57902387 | MS.gene39910:intron | 35.0% | |
| CTTGATTTACCTGTGAATCA+AGG | - | chr1.4:57906276-57906295 | None:intergenic | 35.0% | |
| GAAGTCGACGTATTCATTAA+TGG | - | chr1.4:57906388-57906407 | None:intergenic | 35.0% | |
| GAGAACCATAAAAACATGGT+TGG | - | chr1.4:57906704-57906723 | None:intergenic | 35.0% | |
| GCATAGACGAGTAATTTCTT+TGG | - | chr1.4:57903257-57903276 | None:intergenic | 35.0% | |
| GCTCTCTATGATGAAATCAT+TGG | - | chr1.4:57902485-57902504 | None:intergenic | 35.0% | |
| GGAAAAAGGAAAATGACTAG+AGG | + | chr1.4:57905432-57905451 | MS.gene39910:intron | 35.0% | |
| GGTCCTATATTTAGAGACAA+GGG | - | chr1.4:57902374-57902393 | None:intergenic | 35.0% | |
| GGTTTAAAAGAGGTGGAAAA+AGG | + | chr1.4:57905418-57905437 | MS.gene39910:intron | 35.0% | |
| GTCAACACAGTTTAAATGAG+TGG | - | chr1.4:57903120-57903139 | None:intergenic | 35.0% | |
| GTGCAAAAAATGAGATGACT+AGG | - | chr1.4:57905577-57905596 | None:intergenic | 35.0% | |
| TAAAAAGGTCGAAGTCATAG+TGG | - | chr1.4:57901687-57901706 | None:intergenic | 35.0% | |
| TATTCCTTTCCAGGAATATC+AGG | - | chr1.4:57903656-57903675 | None:intergenic | 35.0% | |
| TCTATTGCATATTCCTTTCC+AGG | - | chr1.4:57903665-57903684 | None:intergenic | 35.0% | |
| TGCTAAAGATGGATCAATAG+AGG | + | chr1.4:57904765-57904784 | MS.gene39910:CDS | 35.0% | |
| TTAAAATTAGCCAACCCTCA+AGG | - | chr1.4:57904556-57904575 | None:intergenic | 35.0% | |
| TTAACAGCTACTGAAGTTAG+AGG | - | chr1.4:57902951-57902970 | None:intergenic | 35.0% | |
| TTATACCGATATTGCTAGGT+TGG | - | chr1.4:57901909-57901928 | None:intergenic | 35.0% | |
| TTCGTAAAACGTAGCTCATT+TGG | - | chr1.4:57901932-57901951 | None:intergenic | 35.0% | |
| TTGGTTATACCGATATTGCT+AGG | - | chr1.4:57901913-57901932 | None:intergenic | 35.0% | |
| ! | AATCGTGTGTATCTAAAACC+AGG | + | chr1.4:57902829-57902848 | MS.gene39910:intron | 35.0% |
| ! | AATGCTTGTTAAGCAAGATC+AGG | - | chr1.4:57905159-57905178 | None:intergenic | 35.0% |
| ! | ACGTCTACACAGCAAATTTT+AGG | + | chr1.4:57905916-57905935 | MS.gene39910:CDS | 35.0% |
| ! | ATCGTGTGTATCTAAAACCA+GGG | + | chr1.4:57902830-57902849 | MS.gene39910:intron | 35.0% |
| ! | ATGCTTGTTAAGCAAGATCA+GGG | - | chr1.4:57905158-57905177 | None:intergenic | 35.0% |
| ! | ATTTGAACACTAGACTGGTT+GGG | + | chr1.4:57902560-57902579 | MS.gene39910:intron | 35.0% |
| ! | CAAGTCCTAAAAGTGTATCA+TGG | - | chr1.4:57904404-57904423 | None:intergenic | 35.0% |
| ! | CGTGGTTAACCATAATTTTC+AGG | - | chr1.4:57903029-57903048 | None:intergenic | 35.0% |
| ! | GGATTGAGATATTAGGGTTT+TGG | - | chr1.4:57901605-57901624 | None:intergenic | 35.0% |
| ! | TAGTTGGCTCAATTTCCATA+CGG | + | chr1.4:57904590-57904609 | MS.gene39910:intron | 35.0% |
| ! | TTTGCAGTTGCTATTAAAGC+TGG | + | chr1.4:57906151-57906170 | MS.gene39910:CDS | 35.0% |
| !! | AAACATCGGTTCCTTCAATT+TGG | + | chr1.4:57904885-57904904 | MS.gene39910:CDS | 35.0% |
| !! | AACATCGGTTCCTTCAATTT+GGG | + | chr1.4:57904886-57904905 | MS.gene39910:CDS | 35.0% |
| !! | AGGTATTGAATTCCATACTG+AGG | + | chr1.4:57903967-57903986 | MS.gene39910:CDS | 35.0% |
| !! | CAGGTTTTGATGGTAAATCA+AGG | - | chr1.4:57903700-57903719 | None:intergenic | 35.0% |
| !! | GAGTTTGCTGGTATCTTTAA+TGG | + | chr1.4:57903758-57903777 | MS.gene39910:CDS | 35.0% |
| !! | GATGCTAAAAGAGTATTTGC+TGG | - | chr1.4:57904173-57904192 | None:intergenic | 35.0% |
| !! | GGTTTTTGGAAAATGGTACT+TGG | + | chr1.4:57902873-57902892 | MS.gene39910:intron | 35.0% |
| !! | TCTCGTGTTTTTGTCAAATG+GGG | - | chr1.4:57902395-57902414 | None:intergenic | 35.0% |
| !! | TTGAGAGTATTCATCAACCT+GGG | - | chr1.4:57904867-57904886 | None:intergenic | 35.0% |
| !! | TTGAGATATTAGGGTTTTGG+TGG | - | chr1.4:57901602-57901621 | None:intergenic | 35.0% |
| !! | TTTGAGAGTATTCATCAACC+TGG | - | chr1.4:57904868-57904887 | None:intergenic | 35.0% |
| !!! | AAGAAAGCAATGGTTTTGGA+TGG | + | chr1.4:57903300-57903319 | MS.gene39910:CDS | 35.0% |
| !!! | CACATTTTAGTTTCAGTTGG+AGG | + | chr1.4:57903617-57903636 | MS.gene39910:CDS | 35.0% |
| !!! | GTTATCCCGTATTTGGTTTT+TGG | + | chr1.4:57902859-57902878 | MS.gene39910:intron | 35.0% |
| !!! | TAATTTGCTCCTTTTCGCTT+TGG | + | chr1.4:57902189-57902208 | MS.gene39910:intron | 35.0% |
| AAAAGAAAACTTCCCTGTGC+AGG | + | chr1.4:57906471-57906490 | MS.gene39910:intron | 40.0% | |
| AAAGATACCAGCAAACTCCA+AGG | - | chr1.4:57903756-57903775 | None:intergenic | 40.0% | |
| AAGATATCAACGGAAGACAC+TGG | - | chr1.4:57906308-57906327 | None:intergenic | 40.0% | |
| AAGTTCCTCTTCCATAGCTT+GGG | + | chr1.4:57901836-57901855 | MS.gene39910:intron | 40.0% | |
| AATATTAAGCAAGGGGCTGA+AGG | - | chr1.4:57904457-57904476 | None:intergenic | 40.0% | |
| ACAGTGAACCTAAGCATGAT+TGG | + | chr1.4:57903330-57903349 | MS.gene39910:CDS | 40.0% | |
| AGAAGATTGCCATTGTTGGT+GGG | + | chr1.4:57903720-57903739 | MS.gene39910:CDS | 40.0% | |
| AGGACGCAAACCTAATACTA+AGG | + | chr1.4:57904087-57904106 | MS.gene39910:CDS | 40.0% | |
| AGTGTCCAACCTAGCAATAT+CGG | + | chr1.4:57901901-57901920 | MS.gene39910:intron | 40.0% | |
| AGTTTCATAAAAACCCGGTC+TGG | - | chr1.4:57905969-57905988 | None:intergenic | 40.0% | |
| ATTCATCAACCTGGGTGAAT+AGG | - | chr1.4:57904859-57904878 | None:intergenic | 40.0% | |
| ATTGGTAGACTTCTTCGTGA+GGG | - | chr1.4:57906549-57906568 | None:intergenic | 40.0% | |
| CATCTCCTTTCAGAAAGACA+CGG | - | chr1.4:57902237-57902256 | None:intergenic | 40.0% | |
| CATTCCTGATATTCCTGGAA+AGG | + | chr1.4:57903649-57903668 | MS.gene39910:CDS | 40.0% | |
| CCAGGAATATCAGGAATGAA+GGG | - | chr1.4:57903647-57903666 | None:intergenic | 40.0% | |
| CTCTTTCGAATCTTCCTAGT+GGG | - | chr1.4:57906253-57906272 | None:intergenic | 40.0% | |
| CTTGTTGAAGTGTGGTATTG+TGG | + | chr1.4:57902692-57902711 | MS.gene39910:intron | 40.0% | |
| GAATAAGAAACCCCAAGCTA+TGG | - | chr1.4:57901850-57901869 | None:intergenic | 40.0% | |
| GATGATATACAACCACACAC+TGG | - | chr1.4:57905080-57905099 | None:intergenic | 40.0% | |
| GATTTGAACACTAGACTGGT+TGG | + | chr1.4:57902559-57902578 | MS.gene39910:intron | 40.0% | |
| GGGTCCTATATTTAGAGACA+AGG | - | chr1.4:57902375-57902394 | None:intergenic | 40.0% | |
| GGTGTGAAGATTGCTAAAGA+TGG | + | chr1.4:57904754-57904773 | MS.gene39910:CDS | 40.0% | |
| GTTCCTTCAATTTGGGCAAT+CGG | + | chr1.4:57904893-57904912 | MS.gene39910:CDS | 40.0% | |
| TAAGGGAGAAGAACAAGAGA+GGG | - | chr1.4:57901506-57901525 | None:intergenic | 40.0% | |
| TAAGTTCCTCTTCCATAGCT+TGG | + | chr1.4:57901835-57901854 | MS.gene39910:intron | 40.0% | |
| TAGTATGCTGAACAGAATGC+AGG | - | chr1.4:57906344-57906363 | None:intergenic | 40.0% | |
| TATTGGTAGACTTCTTCGTG+AGG | - | chr1.4:57906550-57906569 | None:intergenic | 40.0% | |
| TCCAGGAATATCAGGAATGA+AGG | - | chr1.4:57903648-57903667 | None:intergenic | 40.0% | |
| TGACACGAATTTGTATGGTG+AGG | + | chr1.4:57905287-57905306 | MS.gene39910:intron | 40.0% | |
| TGGTTCTCTTAGCATGCTAT+TGG | + | chr1.4:57906716-57906735 | MS.gene39910:intron | 40.0% | |
| TTTCACCGTGTCTTTCTGAA+AGG | + | chr1.4:57902229-57902248 | MS.gene39910:intron | 40.0% | |
| TTTGCGAGGATTTGATGAAG+AGG | + | chr1.4:57903823-57903842 | MS.gene39910:CDS | 40.0% | |
| ! | AATTTAGGACTGGAGTCTGT+TGG | + | chr1.4:57904733-57904752 | MS.gene39910:CDS | 40.0% |
| ! | AGCAAATTTTAGGCCACTGA+AGG | + | chr1.4:57905926-57905945 | MS.gene39910:CDS | 40.0% |
| ! | AGTGTGTTTCGGGTAAGTAA+GGG | - | chr1.4:57901523-57901542 | None:intergenic | 40.0% |
| ! | CATCATGACGAGAGCTTTAA+TGG | + | chr1.4:57905397-57905416 | MS.gene39910:intron | 40.0% |
| ! | CTCACACAGTTGATGTTGAT+GGG | + | chr1.4:57903576-57903595 | MS.gene39910:CDS | 40.0% |
| ! | CTCTCTTTAAAGACCAGCAA+AGG | + | chr1.4:57904028-57904047 | MS.gene39910:CDS | 40.0% |
| ! | GACTTCGACCTTTTTACCAT+CGG | + | chr1.4:57901691-57901710 | MS.gene39910:CDS | 40.0% |
| ! | GCGAGAAAATGGGAAGTTTT+TGG | - | chr1.4:57901554-57901573 | None:intergenic | 40.0% |
| ! | TGGTGAAGAAGAGTGTGTTT+CGG | - | chr1.4:57901534-57901553 | None:intergenic | 40.0% |
| ! | TTCACTGCAGAATTTAGGAC+TGG | + | chr1.4:57904723-57904742 | MS.gene39910:intron | 40.0% |
| !! | GCAATCTTCTCAGGTTTTGA+TGG | - | chr1.4:57903710-57903729 | None:intergenic | 40.0% |
| !! | GCAGAAAATATGGCTCTAAG+AGG | + | chr1.4:57903947-57903966 | MS.gene39910:CDS | 40.0% |
| !! | TTCTTTGGCTTGTTGAAGTG+TGG | + | chr1.4:57902684-57902703 | MS.gene39910:intron | 40.0% |
| AAAATTCGAGGCAAAGCGAG+AGG | - | chr1.4:57901740-57901759 | None:intergenic | 45.0% | |
| AATGTAACCCCCACCAACAA+TGG | - | chr1.4:57903732-57903751 | None:intergenic | 45.0% | |
| ACAATCTCATCGGATACCAC+TGG | + | chr1.4:57901796-57901815 | MS.gene39910:CDS | 45.0% | |
| AGAATCATCCCACCTTTCCA+CGG | - | chr1.4:57903451-57903470 | None:intergenic | 45.0% | |
| AGACTTCTTCGTGAGGGAAA+GGG | - | chr1.4:57906543-57906562 | None:intergenic | 45.0% | |
| AGAGTGAAGGAGCGAGAAAA+TGG | - | chr1.4:57901565-57901584 | None:intergenic | 45.0% | |
| AGCGTTAGCACCAAAATTCG+AGG | - | chr1.4:57901752-57901771 | None:intergenic | 45.0% | |
| AGTGGTATCCGATGAGATTG+TGG | - | chr1.4:57901797-57901816 | None:intergenic | 45.0% | |
| AGTTCCTCTTCCATAGCTTG+GGG | + | chr1.4:57901837-57901856 | MS.gene39910:intron | 45.0% | |
| ATTAACCACGTATTTGGGCG+TGG | - | chr1.4:57903047-57903066 | None:intergenic | 45.0% | |
| ATTGAACTCCAGTGTCCTTG+AGG | + | chr1.4:57904538-57904557 | MS.gene39910:intron | 45.0% | |
| CAATCGGAGATGCTACAAAC+AGG | + | chr1.4:57904909-57904928 | MS.gene39910:CDS | 45.0% | |
| CCAACAATGGCAATCTTCTC+AGG | - | chr1.4:57903719-57903738 | None:intergenic | 45.0% | |
| CCATCAACATCAACTGTGTG+AGG | - | chr1.4:57903578-57903597 | None:intergenic | 45.0% | |
| CCCTTCATTCCTGATATTCC+TGG | + | chr1.4:57903644-57903663 | MS.gene39910:CDS | 45.0% | |
| CCTGAGAAGATTGCCATTGT+TGG | + | chr1.4:57903716-57903735 | MS.gene39910:CDS | 45.0% | |
| GAAGATTGCCATTGTTGGTG+GGG | + | chr1.4:57903721-57903740 | MS.gene39910:CDS | 45.0% | |
| GAGAAGATTGCCATTGTTGG+TGG | + | chr1.4:57903719-57903738 | MS.gene39910:CDS | 45.0% | |
| GAGTGAAGGAGCGAGAAAAT+GGG | - | chr1.4:57901564-57901583 | None:intergenic | 45.0% | |
| GATGAAGAGGTAAGCAAGCA+TGG | + | chr1.4:57903836-57903855 | MS.gene39910:intron | 45.0% | |
| GCACAGGCTGTAGAACAATA+TGG | + | chr1.4:57905885-57905904 | MS.gene39910:intron | 45.0% | |
| GCAGACTTTGATGCTACTGT+AGG | + | chr1.4:57906184-57906203 | MS.gene39910:CDS | 45.0% | |
| GCTCTTTCGAATCTTCCTAG+TGG | - | chr1.4:57906254-57906273 | None:intergenic | 45.0% | |
| GGAAAGGTGGGATGATTCTT+TGG | + | chr1.4:57903452-57903471 | MS.gene39910:intron | 45.0% | |
| GGGAGGGGATTGAGATATTA+GGG | - | chr1.4:57901611-57901630 | None:intergenic | 45.0% | |
| GTAAGGGAGAAGAACAAGAG+AGG | - | chr1.4:57901507-57901526 | None:intergenic | 45.0% | |
| GTCTCCTGTAGCTATCACTA+AGG | + | chr1.4:57903991-57904010 | MS.gene39910:CDS | 45.0% | |
| TACATTGCCTTGGAGTTTGC+TGG | + | chr1.4:57903746-57903765 | MS.gene39910:CDS | 45.0% | |
| TAGACTTCTTCGTGAGGGAA+AGG | - | chr1.4:57906544-57906563 | None:intergenic | 45.0% | |
| TCAACAGACCCGAGTAATCA+TGG | - | chr1.4:57906497-57906516 | None:intergenic | 45.0% | |
| TCAAGAACATGCAAGCCGTA+TGG | - | chr1.4:57904608-57904627 | None:intergenic | 45.0% | |
| TCCGATGAGATTGTGGAGAA+CGG | - | chr1.4:57901790-57901809 | None:intergenic | 45.0% | |
| TCCGTTCTCCACAATCTCAT+CGG | + | chr1.4:57901786-57901805 | MS.gene39910:CDS | 45.0% | |
| TCGAAAGAGCCTTGATTCAC+AGG | + | chr1.4:57906264-57906283 | MS.gene39910:CDS | 45.0% | |
| TCTCCGATTGCCCAAATTGA+AGG | - | chr1.4:57904899-57904918 | None:intergenic | 45.0% | |
| TGATGCTCCTGAAATTGTGC+AGG | + | chr1.4:57906040-57906059 | MS.gene39910:CDS | 45.0% | |
| TTCTGGGTTTGCACATGTGT+GGG | + | chr1.4:57906015-57906034 | MS.gene39910:CDS | 45.0% | |
| TTGAACTCCAGTGTCCTTGA+GGG | + | chr1.4:57904539-57904558 | MS.gene39910:intron | 45.0% | |
| TTGTGCAGCTGTGTAATACG+TGG | + | chr1.4:57903224-57903243 | MS.gene39910:intron | 45.0% | |
| ! | AACTCCTCCAATTGGTGGTT+GGG | - | chr1.4:57905748-57905767 | None:intergenic | 45.0% |
| ! | AAGATTGCCATTGTTGGTGG+GGG | + | chr1.4:57903722-57903741 | MS.gene39910:CDS | 45.0% |
| ! | ACTCCAGTTGCTTTGATGGA+GGG | + | chr1.4:57904941-57904960 | MS.gene39910:CDS | 45.0% |
| ! | AGTGTTACTCCTATTCACCC+AGG | + | chr1.4:57904847-57904866 | MS.gene39910:intron | 45.0% |
| ! | CAATGGATTTAGCCTGCCAT+AGG | - | chr1.4:57905797-57905816 | None:intergenic | 45.0% |
| ! | CCTCACACAGTTGATGTTGA+TGG | + | chr1.4:57903575-57903594 | MS.gene39910:CDS | 45.0% |
| ! | GAGTGTGTTTCGGGTAAGTA+AGG | - | chr1.4:57901524-57901543 | None:intergenic | 45.0% |
| ! | GGTGAAGAAGAGTGTGTTTC+GGG | - | chr1.4:57901533-57901552 | None:intergenic | 45.0% |
| ! | GTATCTAAAACCAGGGAAGC+CGG | + | chr1.4:57902837-57902856 | MS.gene39910:intron | 45.0% |
| ! | TCTCACTCCAGTTGCTTTGA+TGG | + | chr1.4:57904937-57904956 | MS.gene39910:CDS | 45.0% |
| ! | TCTCGCTTTGCCTCGAATTT+TGG | + | chr1.4:57901739-57901758 | MS.gene39910:CDS | 45.0% |
| ! | TCTGAAGCAAAAGCTGTAGC+CGG | + | chr1.4:57906801-57906820 | MS.gene39910:CDS | 45.0% |
| ! | TGAGCCAACTAAGAAGCATG+TGG | - | chr1.4:57904581-57904600 | None:intergenic | 45.0% |
| !! | TAATAGTTTAAAAAAAAAAA+TGG | - | chr1.4:57905322-57905341 | None:intergenic | 5.0% |
| AAGGTCGAAGTCATAGTGGC+CGG | - | chr1.4:57901683-57901702 | None:intergenic | 50.0% | |
| ACTCCCTCCATCAAAGCAAC+TGG | - | chr1.4:57904947-57904966 | None:intergenic | 50.0% | |
| AGACCAACTCCTCCAATTGG+TGG | - | chr1.4:57905753-57905772 | None:intergenic | 50.0% | |
| AGGAGCAGGTGAATGACCTA+TGG | + | chr1.4:57905778-57905797 | MS.gene39910:intron | 50.0% | |
| ATCTCATCGGATACCACTGG+AGG | + | chr1.4:57901799-57901818 | MS.gene39910:CDS | 50.0% | |
| ATTGAAGGCCGTGGAAAGGT+GGG | + | chr1.4:57903440-57903459 | MS.gene39910:intron | 50.0% | |
| CAACCACCAATTGGAGGAGT+TGG | + | chr1.4:57905747-57905766 | MS.gene39910:CDS | 50.0% | |
| CTACAGGAGACTCCTCAGTA+TGG | - | chr1.4:57903982-57904001 | None:intergenic | 50.0% | |
| CTGAGGAGTTTGTCACCATG+AGG | + | chr1.4:57906224-57906243 | MS.gene39910:CDS | 50.0% | |
| CTGTGCAGGCCATGATTACT+CGG | + | chr1.4:57906485-57906504 | MS.gene39910:intron | 50.0% | |
| GAAACCCCAAGCTATGGAAG+AGG | - | chr1.4:57901844-57901863 | None:intergenic | 50.0% | |
| GAAGCCGGTTATCCCGTATT+TGG | + | chr1.4:57902852-57902871 | MS.gene39910:intron | 50.0% | |
| GACTTCTTCGTGAGGGAAAG+GGG | - | chr1.4:57906542-57906561 | None:intergenic | 50.0% | |
| GAGTAATCATGGCCTGCACA+GGG | - | chr1.4:57906486-57906505 | None:intergenic | 50.0% | |
| GCAGCAACTACAACAACCAC+CGG | - | chr1.4:57905522-57905541 | None:intergenic | 50.0% | |
| GCTATCACTAAGGCAGCTGA+TGG | + | chr1.4:57904001-57904020 | MS.gene39910:CDS | 50.0% | |
| GCTGCCTTAGTGATAGCTAC+AGG | - | chr1.4:57903998-57904017 | None:intergenic | 50.0% | |
| GGGGAGGGGATTGAGATATT+AGG | - | chr1.4:57901612-57901631 | None:intergenic | 50.0% | |
| GTGAGACCAACTCCTCCAAT+TGG | - | chr1.4:57905756-57905775 | None:intergenic | 50.0% | |
| GTGTTCTCCCAACCACCAAT+TGG | + | chr1.4:57905738-57905757 | MS.gene39910:CDS | 50.0% | |
| GTTAACCACGCCCAAATACG+TGG | + | chr1.4:57903039-57903058 | MS.gene39910:intron | 50.0% | |
| GTTGATTGAAGGCCGTGGAA+AGG | + | chr1.4:57903436-57903455 | MS.gene39910:CDS | 50.0% | |
| TCTGGGTTTGCACATGTGTG+GGG | + | chr1.4:57906016-57906035 | MS.gene39910:CDS | 50.0% | |
| TGACTTCAGTGACCAGTGTG+TGG | + | chr1.4:57905065-57905084 | MS.gene39910:intron | 50.0% | |
| TGTGCAGGCCATGATTACTC+GGG | + | chr1.4:57906486-57906505 | MS.gene39910:intron | 50.0% | |
| TTCTCCCAACCACCAATTGG+AGG | + | chr1.4:57905741-57905760 | MS.gene39910:CDS | 50.0% | |
| ! | AGGAGTGGGTTTACTGAGTC+AGG | + | chr1.4:57902754-57902773 | MS.gene39910:intron | 50.0% |
| ! | AGTTGCTTTGATGGAGGGAG+TGG | + | chr1.4:57904946-57904965 | MS.gene39910:CDS | 50.0% |
| ! | CAACTCCTCCAATTGGTGGT+TGG | - | chr1.4:57905749-57905768 | None:intergenic | 50.0% |
| ! | CACTAGACTGGTTGGGTTTG+TGG | + | chr1.4:57902567-57902586 | MS.gene39910:intron | 50.0% |
| ! | CACTCCAGTTGCTTTGATGG+AGG | + | chr1.4:57904940-57904959 | MS.gene39910:CDS | 50.0% |
| ! | CGACAAAAGCAGGTTTTGCG+AGG | + | chr1.4:57903809-57903828 | MS.gene39910:CDS | 50.0% |
| ! | GACCTTTTTACCATCGGTGC+CGG | + | chr1.4:57901697-57901716 | MS.gene39910:CDS | 50.0% |
| ! | GAGAGAAGGTGTGAGAGTGA+AGG | - | chr1.4:57901578-57901597 | None:intergenic | 50.0% |
| ! | GTTCTGGGTTTGCACATGTG+TGG | + | chr1.4:57906014-57906033 | MS.gene39910:CDS | 50.0% |
| !! | AAAGACCAGCAAAGGTACCG+TGG | + | chr1.4:57904036-57904055 | MS.gene39910:CDS | 50.0% |
| !! | AGGGTTTTGGTGGAGAGAGA+AGG | - | chr1.4:57901592-57901611 | None:intergenic | 50.0% |
| !! | GTCAAGTTGATTGAAGGCCG+TGG | + | chr1.4:57903431-57903450 | MS.gene39910:CDS | 50.0% |
| !! | TTCCGGCACCGATGGTAAAA+AGG | - | chr1.4:57901702-57901721 | None:intergenic | 50.0% |
| ACAAACTCCTCAGCTGCGGT+TGG | - | chr1.4:57906217-57906236 | None:intergenic | 55.0% | |
| ACCATCCACGGTACCTTTGC+TGG | - | chr1.4:57904044-57904063 | None:intergenic | 55.0% | |
| ACTCCAGTGTCCTTGAGGGT+TGG | + | chr1.4:57904543-57904562 | MS.gene39910:intron | 55.0% | |
| CAAACTCCTCAGCTGCGGTT+GGG | - | chr1.4:57906216-57906235 | None:intergenic | 55.0% | |
| CGAGTAATCATGGCCTGCAC+AGG | - | chr1.4:57906487-57906506 | None:intergenic | 55.0% | |
| CTTCCTAGTGGGAGTCCTCA+TGG | - | chr1.4:57906242-57906261 | None:intergenic | 55.0% | |
| GATTGAAGGCCGTGGAAAGG+TGG | + | chr1.4:57903439-57903458 | MS.gene39910:intron | 55.0% | |
| GCAGGTGAATGACCTATGGC+AGG | + | chr1.4:57905782-57905801 | MS.gene39910:intron | 55.0% | |
| GCTGAGTTGCAGAGGCTTAC+TGG | + | chr1.4:57903377-57903396 | MS.gene39910:CDS | 55.0% | |
| GGTGACAAACTCCTCAGCTG+CGG | - | chr1.4:57906221-57906240 | None:intergenic | 55.0% | |
| GTCCGCGCTGAATCGCAAAA+CGG | + | chr1.4:57901646-57901665 | MS.gene39910:CDS | 55.0% | |
| TAGCCAACCCTCAAGGACAC+TGG | - | chr1.4:57904549-57904568 | None:intergenic | 55.0% | |
| TCACCATGAGGACTCCCACT+AGG | + | chr1.4:57906236-57906255 | MS.gene39910:CDS | 55.0% | |
| TCGAAGTCATAGTGGCCGGT+GGG | - | chr1.4:57901679-57901698 | None:intergenic | 55.0% | |
| TGGTGGGGGTTACATTGCCT+TGG | + | chr1.4:57903736-57903755 | MS.gene39910:CDS | 55.0% | |
| ! | AGTTGGTCTCACAGAGGAGC+AGG | + | chr1.4:57905764-57905783 | MS.gene39910:CDS | 55.0% |
| ! | TCGGATACCACTGGAGGTGT+CGG | + | chr1.4:57901805-57901824 | MS.gene39910:CDS | 55.0% |
| ! | TGGAGGAGTTGGTCTCACAG+AGG | + | chr1.4:57905758-57905777 | MS.gene39910:CDS | 55.0% |
| !! | ACCAGCAAAGGTACCGTGGA+TGG | + | chr1.4:57904040-57904059 | MS.gene39910:CDS | 55.0% |
| !! | TGTGTGATCGAGCTTGCTGC+CGG | + | chr1.4:57905500-57905519 | MS.gene39910:intron | 55.0% |
| !! | TTTACCATCGGTGCCGGAAG+CGG | + | chr1.4:57901703-57901722 | MS.gene39910:CDS | 55.0% |
| CACTGAAGGCCACCCTCTCT+GGG | + | chr1.4:57905940-57905959 | MS.gene39910:CDS | 60.0% | |
| CATTCACCCAACCGCAGCTG+AGG | + | chr1.4:57906207-57906226 | MS.gene39910:CDS | 60.0% | |
| CGAAGTCATAGTGGCCGGTG+GGG | - | chr1.4:57901678-57901697 | None:intergenic | 60.0% | |
| GGTTGGGAGAACACAGCAGC+AGG | - | chr1.4:57905732-57905751 | None:intergenic | 60.0% | |
| GTCGAAGTCATAGTGGCCGG+TGG | - | chr1.4:57901680-57901699 | None:intergenic | 60.0% | |
| TCGAGGCAAAGCGAGAGGCA+CGG | - | chr1.4:57901735-57901754 | None:intergenic | 60.0% | |
| TGAGGGAAAGGGGTGACAGC+AGG | - | chr1.4:57906532-57906551 | None:intergenic | 60.0% | |
| ! | TACGGGATAACCGGCTTCCC+TGG | - | chr1.4:57902850-57902869 | None:intergenic | 60.0% |
| !! | CGCCGTTTTGCGATTCAGCG+CGG | - | chr1.4:57901651-57901670 | None:intergenic | 60.0% |
| !! | GATACCACTGGAGGTGTCGG+CGG | + | chr1.4:57901808-57901827 | MS.gene39910:CDS | 60.0% |
| CCACTGAAGGCCACCCTCTC+TGG | + | chr1.4:57905939-57905958 | MS.gene39910:CDS | 65.0% | |
| CCAGAGAGGGTGGCCTTCAG+TGG | - | chr1.4:57905942-57905961 | None:intergenic | 65.0% | |
| CCCTCTCTGGGCTTCCAGAC+CGG | + | chr1.4:57905952-57905971 | MS.gene39910:CDS | 65.0% | |
| CCGGTCTGGAAGCCCAGAGA+GGG | - | chr1.4:57905955-57905974 | None:intergenic | 65.0% | |
| CCTCTCTGGGCTTCCAGACC+GGG | + | chr1.4:57905953-57905972 | MS.gene39910:CDS | 65.0% | |
| CGATTCAGCGCGGACAGCGA+AGG | - | chr1.4:57901641-57901660 | None:intergenic | 65.0% | |
| GTCTGGAAGCCCAGAGAGGG+TGG | - | chr1.4:57905952-57905971 | None:intergenic | 65.0% | |
| !! | CAAAACGGCGTCGACCCCAC+CGG | + | chr1.4:57901661-57901680 | MS.gene39910:CDS | 65.0% |
| !! | GTGATCGAGCTTGCTGCCGG+TGG | + | chr1.4:57905503-57905522 | MS.gene39910:intron | 65.0% |
| CAGCGCGGACAGCGAAGGTG+CGG | - | chr1.4:57901636-57901655 | None:intergenic | 70.0% | |
| CCCGGTCTGGAAGCCCAGAG+AGG | - | chr1.4:57905956-57905975 | None:intergenic | 70.0% | |
| GGCACGGACACCTCCGCTTC+CGG | - | chr1.4:57901719-57901738 | None:intergenic | 70.0% | |
| ! | ACCTCCGCTTCCGGCACCGA+TGG | - | chr1.4:57901710-57901729 | None:intergenic | 70.0% |
| !! | ACCATCGGTGCCGGAAGCGG+AGG | + | chr1.4:57901706-57901725 | MS.gene39910:CDS | 70.0% |
| CGTGCCGCCGACACCTCCAG+TGG | - | chr1.4:57901815-57901834 | None:intergenic | 75.0% | |
| ! | ACAGCGAAGGTGCGGCGGGG+AGG | - | chr1.4:57901628-57901647 | None:intergenic | 75.0% |
| ! | AGCGAAGGTGCGGCGGGGAG+GGG | - | chr1.4:57901626-57901645 | None:intergenic | 75.0% |
| ! | CAGCGAAGGTGCGGCGGGGA+GGG | - | chr1.4:57901627-57901646 | None:intergenic | 75.0% |
| ! | CGCGGACAGCGAAGGTGCGG+CGG | - | chr1.4:57901633-57901652 | None:intergenic | 75.0% |
| ! | CGGACAGCGAAGGTGCGGCG+GGG | - | chr1.4:57901631-57901650 | None:intergenic | 75.0% |
| ! | GCGGACAGCGAAGGTGCGGC+GGG | - | chr1.4:57901632-57901651 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 57901472 | 57906830 | 57901472 | ID=MS.gene39910 |
| chr1.4 | mRNA | 57901472 | 57906830 | 57901472 | ID=MS.gene39910.t1;Parent=MS.gene39910 |
| chr1.4 | exon | 57901472 | 57901833 | 57901472 | ID=MS.gene39910.t1.exon1;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57901472 | 57901833 | 57901472 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57903232 | 57903457 | 57903232 | ID=MS.gene39910.t1.exon2;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57903232 | 57903457 | 57903232 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57903566 | 57903844 | 57903566 | ID=MS.gene39910.t1.exon3;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57903566 | 57903844 | 57903566 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57903932 | 57904108 | 57903932 | ID=MS.gene39910.t1.exon4;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57903932 | 57904108 | 57903932 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57904733 | 57904786 | 57904733 | ID=MS.gene39910.t1.exon5;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57904733 | 57904786 | 57904733 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57904869 | 57905017 | 57904869 | ID=MS.gene39910.t1.exon6;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57904869 | 57905017 | 57904869 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57905722 | 57905785 | 57905722 | ID=MS.gene39910.t1.exon7;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57905722 | 57905785 | 57905722 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57905891 | 57906061 | 57905891 | ID=MS.gene39910.t1.exon8;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57905891 | 57906061 | 57905891 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57906148 | 57906285 | 57906148 | ID=MS.gene39910.t1.exon9;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57906148 | 57906285 | 57906148 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| chr1.4 | exon | 57906789 | 57906830 | 57906789 | ID=MS.gene39910.t1.exon10;Parent=MS.gene39910.t1 |
| chr1.4 | CDS | 57906789 | 57906830 | 57906789 | ID=cds.MS.gene39910.t1;Parent=MS.gene39910.t1 |
| Gene Sequence |
| Protein sequence |
