AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41567

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41567.t1 MTR_3g466180 93.569 311 7 1 1 311 26 323 0.0 586
MS.gene41567.t1 MTR_7g072510 65.909 308 92 1 4 311 18 312 3.89e-146 414
MS.gene41567.t1 MTR_7g072480 63.961 308 98 1 4 311 22 316 1.71e-138 394
MS.gene41567.t1 MTR_4g029200 57.605 309 118 1 3 311 43 338 7.32e-135 386
MS.gene41567.t1 MTR_3g094650 60.968 310 106 2 4 311 26 322 1.81e-133 382
MS.gene41567.t1 MTR_4g029190 59.164 311 111 3 4 311 43 340 7.40e-133 381
MS.gene41567.t1 MTR_3g072190 58.710 310 115 1 2 311 22 318 1.88e-132 379
MS.gene41567.t1 MTR_5g083860 59.295 312 112 2 2 311 27 325 1.72e-130 374
MS.gene41567.t1 MTR_3g094670 61.538 312 105 2 2 311 24 322 3.09e-130 374
MS.gene41567.t1 MTR_2g084080 59.416 308 112 1 4 311 23 317 1.79e-128 369
MS.gene41567.t1 MTR_5g074970 58.280 314 114 3 2 311 26 326 8.18e-128 367
MS.gene41567.t1 MTR_2g084020 58.900 309 113 2 4 311 23 318 4.86e-126 363
MS.gene41567.t1 MTR_2g084110 57.792 308 117 1 4 311 23 317 1.02e-125 362
MS.gene41567.t1 MTR_3g466200 57.235 311 117 3 4 311 23 320 3.02e-125 361
MS.gene41567.t1 MTR_3g094630 61.538 312 105 2 2 311 24 322 1.32e-124 359
MS.gene41567.t1 MTR_4g083710 58.786 313 111 4 4 311 25 324 1.76e-124 359
MS.gene41567.t1 MTR_7g026990 58.199 311 115 3 2 311 26 322 6.75e-124 357
MS.gene41567.t1 MTR_2g084010 57.929 309 116 2 4 311 23 318 9.94e-124 357
MS.gene41567.t1 MTR_1g115900 58.199 311 113 4 4 311 25 321 3.36e-123 356
MS.gene41567.t1 MTR_4g029170 55.305 311 124 3 3 311 24 321 2.40e-122 353
MS.gene41567.t1 MTR_2g084090 55.987 309 122 2 4 311 23 318 9.91e-119 344
MS.gene41567.t1 MTR_2g084000 54.693 309 126 2 4 311 24 319 1.26e-117 342
MS.gene41567.t1 MTR_4g074995 57.827 313 101 5 4 311 22 308 1.99e-117 340
MS.gene41567.t1 MTR_4g029180 54.426 305 124 3 9 311 30 321 2.28e-117 341
MS.gene41567.t1 MTR_3g467600 53.674 313 127 4 4 311 25 324 1.30e-113 332
MS.gene41567.t1 MTR_5g074860 52.564 312 129 5 4 310 27 324 8.37e-112 327
MS.gene41567.t1 MTR_5g074740 52.396 313 130 5 4 311 23 321 9.11e-111 324
MS.gene41567.t1 MTR_4g074990 53.846 312 112 4 4 311 22 305 2.27e-110 322
MS.gene41567.t1 MTR_5g074760 51.757 313 132 5 4 311 23 321 4.99e-110 322
MS.gene41567.t1 MTR_3g072190 59.761 251 101 0 61 311 1 251 1.33e-109 318
MS.gene41567.t1 MTR_5g074710 51.438 313 133 5 4 311 23 321 2.71e-109 320
MS.gene41567.t1 MTR_4g074980 52.751 309 108 5 4 311 23 294 4.17e-104 306
MS.gene41567.t1 MTR_5g021060 47.452 314 144 3 6 311 30 330 5.60e-101 300
MS.gene41567.t1 MTR_4g122640 49.359 312 139 3 6 311 38 336 1.49e-100 299
MS.gene41567.t1 MTR_1g054205 48.113 318 142 4 4 311 22 326 1.68e-100 298
MS.gene41567.t1 MTR_8g076820 47.134 314 145 3 6 311 30 330 9.80e-100 296
MS.gene41567.t1 MTR_4g125940 47.649 319 141 4 4 311 26 329 6.31e-99 294
MS.gene41567.t1 MTR_5g017850 47.785 316 143 4 4 311 25 326 5.25e-97 289
MS.gene41567.t1 MTR_2g040000 47.022 319 142 4 5 311 28 331 7.77e-96 286
MS.gene41567.t1 MTR_5g017860 47.152 316 145 4 4 311 25 326 1.86e-95 285
MS.gene41567.t1 MTR_7g093370 44.969 318 152 4 4 311 67 371 9.96e-93 280
MS.gene41567.t1 MTR_4g074980 57.787 244 86 3 4 243 23 253 1.03e-92 276
MS.gene41567.t1 MTR_5g014100 47.500 320 140 4 6 311 26 331 1.91e-92 278
MS.gene41567.t1 MTR_1g022970 45.000 320 153 4 1 311 42 347 5.76e-92 277
MS.gene41567.t1 MTR_2g029830 45.741 317 150 3 4 311 26 329 9.81e-92 277
MS.gene41567.t1 MTR_2g029560 43.711 318 157 3 3 311 21 325 1.61e-91 276
MS.gene41567.t1 MTR_5g049280 43.260 319 156 5 5 311 32 337 2.73e-90 273
MS.gene41567.t1 MTR_2g029800 44.795 317 153 3 4 311 27 330 1.36e-89 271
MS.gene41567.t1 MTR_2g029815 44.795 317 153 3 4 311 27 330 1.55e-89 271
MS.gene41567.t1 MTR_4g125940 48.958 288 121 4 35 311 2 274 1.56e-89 268
MS.gene41567.t1 MTR_2g029750 44.479 317 154 3 4 311 27 330 2.69e-89 271
MS.gene41567.t1 MTR_2g028980 44.164 317 155 3 4 311 27 330 1.18e-88 269
MS.gene41567.t1 MTR_2g029740 44.164 317 155 3 4 311 27 330 2.38e-88 268
MS.gene41567.t1 MTR_2g029860 43.533 317 157 3 4 311 27 330 4.11e-88 268
MS.gene41567.t1 MTR_2g029820 44.479 317 154 3 4 311 27 330 7.18e-87 265
MS.gene41567.t1 MTR_4g030890 44.762 315 151 4 4 311 98 396 9.43e-87 266
MS.gene41567.t1 MTR_5g074860 44.872 312 114 6 4 310 27 285 6.69e-86 259
MS.gene41567.t1 MTR_4g031140 43.131 313 155 4 6 311 28 324 4.94e-85 259
MS.gene41567.t1 MTR_2g029730 41.693 319 164 3 2 311 21 326 4.15e-83 254
MS.gene41567.t1 MTR_2g029850 42.902 317 159 3 4 311 27 330 6.52e-83 254
MS.gene41567.t1 MTR_2g029910 42.138 318 161 4 4 311 28 332 8.71e-83 254
MS.gene41567.t1 MTR_1g077000 43.322 307 155 6 6 311 39 327 1.37e-82 253
MS.gene41567.t1 MTR_0155s0040 41.424 309 162 6 4 311 25 315 1.11e-78 242
MS.gene41567.t1 MTR_7g086820 40.823 316 164 5 1 311 15 312 1.93e-76 236
MS.gene41567.t1 MTR_3g092990 40.881 318 167 3 2 311 22 326 5.50e-76 236
MS.gene41567.t1 MTR_2g029830 46.693 257 128 2 64 311 5 261 1.41e-75 233
MS.gene41567.t1 MTR_1g038680 41.534 313 159 5 10 311 33 332 4.99e-75 233
MS.gene41567.t1 MTR_1g101830 39.048 315 168 5 4 311 25 322 3.40e-74 231
MS.gene41567.t1 MTR_2g008710 41.534 313 154 6 10 311 31 325 5.21e-74 231
MS.gene41567.t1 MTR_2g088770 39.432 317 168 6 4 311 24 325 6.04e-74 230
MS.gene41567.t1 MTR_8g075100 41.270 315 155 8 6 311 26 319 2.77e-72 226
MS.gene41567.t1 MTR_4g046713 37.658 316 175 4 4 311 25 326 9.95e-72 225
MS.gene41567.t1 MTR_1g086320 41.640 317 161 4 6 311 30 333 2.34e-71 224
MS.gene41567.t1 MTR_7g107520 39.297 313 166 5 6 311 25 320 5.53e-71 223
MS.gene41567.t1 MTR_4g114210 40.000 320 162 6 4 311 19 320 8.61e-71 222
MS.gene41567.t1 MTR_7g029030 38.264 311 174 4 5 311 24 320 1.13e-69 219
MS.gene41567.t1 MTR_1g086490 41.358 324 159 5 6 311 30 340 4.75e-69 218
MS.gene41567.t1 MTR_1g025980 40.064 312 162 5 6 310 24 317 5.49e-69 218
MS.gene41567.t1 MTR_7g086870 38.835 309 167 6 6 311 22 311 1.01e-68 216
MS.gene41567.t1 MTR_6g027440 37.975 316 174 6 1 311 16 314 1.19e-68 216
MS.gene41567.t1 MTR_5g022870 39.557 316 159 9 6 311 23 316 1.49e-68 216
MS.gene41567.t1 MTR_4g133800 39.482 309 158 7 11 311 46 333 1.85e-66 211
MS.gene41567.t1 MTR_2g067440 36.842 342 164 7 6 310 60 386 5.00e-66 212
MS.gene41567.t1 MTR_1g090760 38.050 318 174 5 4 311 26 330 5.71e-66 210
MS.gene41567.t1 MTR_2g437770 38.535 314 163 7 6 311 50 341 6.40e-66 210
MS.gene41567.t1 MTR_3g092990 38.679 318 163 3 2 311 22 315 1.74e-65 208
MS.gene41567.t1 MTR_6g043280 38.710 310 168 7 6 311 41 332 7.66e-65 207
MS.gene41567.t1 MTR_8g062780 37.539 317 176 4 4 311 21 324 3.07e-64 206
MS.gene41567.t1 MTR_2g078610 35.756 344 168 7 6 310 76 405 1.01e-63 207
MS.gene41567.t1 MTR_2g077990 36.628 344 165 7 6 310 76 405 1.17e-63 206
MS.gene41567.t1 MTR_2g008160 38.871 319 167 7 4 311 22 323 2.07e-63 203
MS.gene41567.t1 MTR_3g072210 52.432 185 86 2 129 311 54 238 5.68e-63 199
MS.gene41567.t1 MTR_6g043460 38.033 305 170 6 6 307 36 324 9.94e-63 202
MS.gene41567.t1 MTR_0286s0010 37.658 316 176 5 4 311 32 334 1.11e-62 202
MS.gene41567.t1 MTR_6g008075 37.658 316 176 5 4 311 32 334 1.11e-62 202
MS.gene41567.t1 MTR_7g072490 47.807 228 65 2 65 292 2 175 9.82e-62 195
MS.gene41567.t1 MTR_5g074700 46.188 223 104 5 92 311 5 214 4.25e-61 194
MS.gene41567.t1 MTR_0147s0010 36.145 332 158 7 6 310 77 381 2.09e-60 197
MS.gene41567.t1 MTR_2g099175 36.050 319 174 7 5 311 35 335 5.87e-59 192
MS.gene41567.t1 MTR_2g078280 35.952 331 159 7 6 297 76 392 1.83e-58 192
MS.gene41567.t1 MTR_5g016010 35.032 314 181 4 4 307 25 325 2.36e-58 190
MS.gene41567.t1 MTR_4g095450 35.806 310 181 4 3 307 24 320 2.97e-58 190
MS.gene41567.t1 MTR_4g087965 35.873 315 177 6 5 307 41 342 3.92e-58 190
MS.gene41567.t1 MTR_1g009750 35.016 317 182 5 5 311 26 328 2.48e-57 188
MS.gene41567.t1 MTR_3g105790 35.962 317 177 4 4 311 23 322 2.64e-57 187
MS.gene41567.t1 MTR_4g132490 33.227 313 190 3 5 311 28 327 7.77e-57 186
MS.gene41567.t1 MTR_5g033470 35.913 323 176 8 4 311 71 377 6.27e-56 186
MS.gene41567.t1 MTR_2g008730 41.736 242 128 4 81 311 62 301 1.34e-54 180
MS.gene41567.t1 MTR_2g067450 36.250 320 172 9 4 310 9 309 1.37e-54 180
MS.gene41567.t1 MTR_6g043240 34.824 313 182 7 2 311 38 331 2.39e-54 181
MS.gene41567.t1 MTR_1g066380 32.803 314 192 4 3 311 24 323 6.56e-54 179
MS.gene41567.t1 MTR_4g127670 33.123 317 186 5 5 311 23 323 7.00e-54 179
MS.gene41567.t1 MTR_1g066640 32.907 313 191 4 4 311 25 323 2.06e-52 175
MS.gene41567.t1 MTR_1g066710 33.123 317 185 5 4 311 25 323 3.02e-52 174
MS.gene41567.t1 MTR_2g008160 35.783 313 150 7 4 311 22 288 7.97e-51 170
MS.gene41567.t1 MTR_1g066680 32.704 318 190 6 1 311 22 322 1.24e-49 167
MS.gene41567.t1 MTR_4g132110 32.792 308 186 6 6 307 32 324 1.01e-48 166
MS.gene41567.t1 MTR_1g009750 32.698 315 175 6 5 311 26 311 6.20e-48 163
MS.gene41567.t1 MTR_3g072260 62.602 123 33 1 5 127 25 134 3.38e-47 155
MS.gene41567.t1 MTR_4g132110 32.268 313 186 7 6 307 32 329 2.20e-46 160
MS.gene41567.t1 MTR_1g066380 33.465 254 163 3 63 311 3 255 5.64e-45 154
MS.gene41567.t1 MTR_3g105790 36.250 240 143 2 81 311 8 246 6.33e-42 145
MS.gene41567.t1 MTR_2g008160 44.199 181 84 4 4 184 22 185 1.90e-40 140
MS.gene41567.t1 MTR_2g029880 37.368 190 100 4 131 311 9 188 2.54e-38 135
MS.gene41567.t1 MTR_2g078560 31.532 222 114 4 124 307 95 316 1.59e-28 112
MS.gene41567.t1 MTR_7g086790 36.757 185 102 4 66 250 17 186 5.87e-28 107
MS.gene41567.t1 MTR_2g077980 30.545 275 144 9 81 310 11 283 1.48e-27 108
MS.gene41567.t1 MTR_5g074770 45.133 113 54 3 200 310 2 108 8.30e-26 99.4
MS.gene41567.t1 MTR_3g462850 41.135 141 71 5 183 311 9 149 3.11e-24 96.3
MS.gene41567.t1 MTR_5g058120 34.416 154 97 2 154 307 6 155 1.65e-23 97.4
MS.gene41567.t1 MTR_4g031040 33.735 166 73 3 80 245 3 131 1.68e-21 88.6
MS.gene41567.t1 MTR_1g089005 43.200 125 63 3 6 130 15 131 3.03e-21 88.6
MS.gene41567.t1 MTR_6g048160 56.627 83 19 3 45 127 22 87 3.31e-19 81.3
MS.gene41567.t1 MTR_4g114220 45.545 101 32 3 26 126 23 100 4.65e-18 79.7
MS.gene41567.t1 MTR_2g029930 41.176 102 41 3 4 102 17 102 1.93e-17 77.0
MS.gene41567.t1 MTR_3g107060 28.625 269 116 9 38 292 106 312 6.07e-17 80.1
MS.gene41567.t1 MTR_1g098320 44.286 70 39 0 238 307 51 120 4.03e-15 71.6
MS.gene41567.t1 MTR_6g071110 29.412 170 104 5 10 177 4 159 2.57e-14 70.1
MS.gene41567.t1 MTR_3g088160 26.154 260 160 7 40 293 121 354 2.82e-14 73.2
MS.gene41567.t1 MTR_3g088160 26.154 260 160 7 40 293 121 354 3.35e-14 73.2
MS.gene41567.t1 MTR_3g086710 57.692 52 22 0 3 54 16 67 3.80e-13 64.7
MS.gene41567.t1 MTR_7g086785 41.096 73 42 1 64 136 3 74 5.48e-12 62.8
MS.gene41567.t1 MTR_0147s0040 41.096 73 43 0 238 310 10 82 2.19e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41567.t1 AT5G05340 60.323 310 108 2 4 311 28 324 1.22e-132 380
MS.gene41567.t1 AT5G58400 56.230 313 121 4 2 311 26 325 5.04e-118 343
MS.gene41567.t1 AT5G58390 54.984 311 124 3 4 311 19 316 2.68e-114 333
MS.gene41567.t1 AT1G14550 52.090 311 133 4 4 311 24 321 1.28e-109 321
MS.gene41567.t1 AT1G14540 51.613 310 135 3 4 311 19 315 3.04e-107 315
MS.gene41567.t1 AT5G06720 49.842 317 137 3 4 311 30 333 1.45e-106 314
MS.gene41567.t1 AT4G36430 45.570 316 151 3 4 311 28 330 1.25e-101 301
MS.gene41567.t1 AT2G18150 45.806 310 147 3 10 311 40 336 4.00e-101 300
MS.gene41567.t1 AT2G18140 45.541 314 150 3 6 311 35 335 4.89e-100 297
MS.gene41567.t1 AT3G50990 46.203 316 149 3 4 311 39 341 4.99e-97 290
MS.gene41567.t1 AT5G06730 46.057 317 149 3 4 311 31 334 1.37e-96 290
MS.gene41567.t1 AT5G66390 45.860 314 149 3 6 311 33 333 2.15e-96 288
MS.gene41567.t1 AT1G44970 46.541 318 148 3 3 311 42 346 4.99e-96 288
MS.gene41567.t1 AT4G08770 44.720 322 154 4 1 311 19 327 1.99e-94 283
MS.gene41567.t1 AT4G16270 48.387 310 137 4 10 311 54 348 3.31e-93 280
MS.gene41567.t1 AT4G08780 43.789 322 157 4 1 311 19 327 5.66e-93 280
MS.gene41567.t1 AT5G19890 48.750 320 132 9 4 311 28 327 2.44e-92 278
MS.gene41567.t1 AT2G38380 45.283 318 151 4 4 311 29 333 6.71e-92 277
MS.gene41567.t1 AT1G49570 46.178 314 146 4 4 307 46 346 1.76e-91 276
MS.gene41567.t1 AT2G38390 44.340 318 154 4 4 311 29 333 7.64e-90 272
MS.gene41567.t1 AT3G32980 43.574 319 156 5 4 311 29 334 2.92e-89 270
MS.gene41567.t1 AT1G68850 41.379 319 161 5 6 311 30 335 1.13e-88 268
MS.gene41567.t1 AT3G49110 43.260 319 157 5 4 311 31 336 2.85e-88 268
MS.gene41567.t1 AT3G49120 42.547 322 161 5 1 311 27 335 2.66e-87 266
MS.gene41567.t1 AT2G22420 44.904 314 148 6 6 311 23 319 1.21e-86 263
MS.gene41567.t1 AT2G35380 45.455 319 148 3 6 311 30 335 3.71e-86 262
MS.gene41567.t1 AT5G19880 44.062 320 154 4 4 311 23 329 2.21e-82 252
MS.gene41567.t1 AT4G33420 43.322 307 155 6 6 311 37 325 2.30e-79 244
MS.gene41567.t1 AT4G33420 43.322 307 155 6 6 311 84 372 1.45e-78 244
MS.gene41567.t1 AT5G17820 41.824 318 155 6 1 311 19 313 5.94e-76 235
MS.gene41567.t1 AT5G64120 41.558 308 156 5 10 311 39 328 6.00e-76 236
MS.gene41567.t1 AT5G17820 41.824 318 155 6 1 311 72 366 4.22e-75 235
MS.gene41567.t1 AT1G71695 40.836 311 164 6 6 311 44 339 6.06e-74 231
MS.gene41567.t1 AT3G03670 40.252 318 169 3 1 311 18 321 8.13e-74 230
MS.gene41567.t1 AT5G15180 39.490 314 166 6 6 311 32 329 1.32e-73 229
MS.gene41567.t1 AT1G05240 39.103 312 164 6 6 307 26 321 1.51e-73 229
MS.gene41567.t1 AT1G05250 39.103 312 164 6 6 307 26 321 1.51e-73 229
MS.gene41567.t1 AT5G40150 41.270 315 166 5 2 311 28 328 4.36e-73 228
MS.gene41567.t1 AT3G01190 40.123 324 163 8 1 311 16 321 4.90e-73 228
MS.gene41567.t1 AT4G11290 38.679 318 171 6 4 311 23 326 5.45e-73 228
MS.gene41567.t1 AT1G05260 39.432 317 168 6 4 311 24 325 9.15e-73 228
MS.gene41567.t1 AT5G51890 40.063 317 163 7 4 311 24 322 3.24e-72 226
MS.gene41567.t1 AT5G42180 40.064 312 162 5 6 310 23 316 2.65e-71 223
MS.gene41567.t1 AT2G41480 39.937 318 161 6 6 311 29 328 4.81e-71 223
MS.gene41567.t1 AT3G21770 38.978 313 167 6 4 307 27 324 1.54e-70 222
MS.gene41567.t1 AT3G28200 39.297 313 174 4 2 311 17 316 5.43e-70 220
MS.gene41567.t1 AT4G33870 35.549 346 167 5 6 309 68 399 5.43e-69 220
MS.gene41567.t1 AT5G14130 37.855 317 172 6 4 311 30 330 9.60e-69 217
MS.gene41567.t1 AT4G26010 39.228 311 169 6 2 311 18 309 1.40e-68 216
MS.gene41567.t1 AT4G26010 39.228 311 169 6 2 311 46 337 1.69e-68 217
MS.gene41567.t1 AT5G39580 41.748 309 155 6 10 311 29 319 2.31e-68 216
MS.gene41567.t1 AT5G14130 37.855 317 172 6 4 311 71 371 2.31e-68 218
MS.gene41567.t1 AT2G35380 45.902 244 119 2 81 311 4 247 4.93e-66 207
MS.gene41567.t1 AT5G47000 38.854 314 172 5 4 311 31 330 4.68e-65 208
MS.gene41567.t1 AT1G34510 38.065 310 172 6 3 311 19 309 8.14e-65 206
MS.gene41567.t1 AT4G17690 38.585 311 172 5 6 311 26 322 3.70e-64 205
MS.gene41567.t1 AT1G77100 40.000 315 165 9 4 311 22 319 6.76e-63 202
MS.gene41567.t1 AT4G37530 36.137 321 182 4 1 311 22 329 1.24e-62 201
MS.gene41567.t1 AT1G30870 37.855 317 164 8 6 311 51 345 1.45e-62 202
MS.gene41567.t1 AT2G18980 37.500 320 171 5 3 311 22 323 4.42e-62 200
MS.gene41567.t1 AT4G31760 37.224 317 173 4 4 311 27 326 2.24e-60 196
MS.gene41567.t1 AT5G67400 35.987 314 178 4 4 307 25 325 1.49e-59 194
MS.gene41567.t1 AT4G30170 35.890 326 166 7 4 311 25 325 2.13e-59 193
MS.gene41567.t1 AT4G25980 35.294 323 180 7 1 311 21 326 2.98e-59 192
MS.gene41567.t1 AT4G37520 35.987 314 178 5 4 307 25 325 9.84e-58 189
MS.gene41567.t1 AT1G24110 35.647 317 181 5 4 311 20 322 1.09e-57 189
MS.gene41567.t1 AT5G64110 38.658 313 161 7 10 311 38 330 1.17e-57 189
MS.gene41567.t1 AT3G49960 35.535 318 182 4 4 311 25 329 3.49e-57 187
MS.gene41567.t1 AT2G34060 36.792 318 172 9 5 308 41 343 5.92e-57 187
MS.gene41567.t1 AT4G37520 35.669 314 176 6 4 307 25 322 5.58e-56 184
MS.gene41567.t1 AT2G24800 36.196 326 165 6 4 311 29 329 8.79e-56 184
MS.gene41567.t1 AT2G39040 35.514 321 178 8 5 311 45 350 2.59e-54 181
MS.gene41567.t1 AT3G17070 35.443 316 180 5 6 311 38 339 3.59e-54 180
MS.gene41567.t1 AT4G37530 37.269 271 147 4 1 261 22 279 1.57e-53 177
MS.gene41567.t1 AT5G64100 35.897 312 169 7 10 311 41 331 1.89e-53 178
MS.gene41567.t1 AT2G37130 34.185 313 186 5 5 311 29 327 9.81e-52 173
MS.gene41567.t1 AT2G37130 34.304 309 183 5 9 311 2 296 3.71e-51 171
MS.gene41567.t1 AT4G21960 33.013 312 188 6 6 311 31 327 1.42e-50 170
MS.gene41567.t1 AT5G22410 33.333 318 180 10 3 308 25 322 1.52e-50 170
MS.gene41567.t1 AT2G43480 33.951 324 181 8 2 311 31 335 2.77e-49 167
MS.gene41567.t1 AT5G24070 32.903 310 177 7 14 311 45 335 3.16e-46 159
MS.gene41567.t1 AT3G17070 36.187 257 153 4 65 311 21 276 4.51e-44 152
MS.gene41567.t1 AT5G39580 42.381 210 99 5 10 219 29 216 1.05e-41 144
MS.gene41567.t1 AT4G25980 39.785 186 95 4 1 186 66 234 1.19e-37 135
MS.gene41567.t1 AT2G24800 41.989 181 88 3 4 184 29 192 4.52e-34 125
MS.gene41567.t1 AT3G42570 40.206 97 57 1 91 186 53 149 5.11e-16 74.3
MS.gene41567.t1 AT4G32320 27.574 272 117 8 37 292 114 321 3.16e-15 75.5
MS.gene41567.t1 AT1G77490 25.385 260 162 7 40 293 106 339 9.34e-14 71.6
MS.gene41567.t1 AT1G07890 28.634 227 122 7 75 297 59 249 1.06e-13 70.1
MS.gene41567.t1 AT1G77490 25.385 260 162 7 40 293 106 339 1.11e-13 71.6
MS.gene41567.t1 AT1G07890 28.700 223 119 7 75 293 59 245 1.30e-13 69.7
MS.gene41567.t1 AT1G07890 28.700 223 119 7 75 293 59 245 1.30e-13 69.7
MS.gene41567.t1 AT1G07890 28.700 223 119 7 75 293 59 245 1.30e-13 69.7
MS.gene41567.t1 AT1G07890 28.700 223 119 7 75 293 59 245 1.30e-13 69.7
MS.gene41567.t1 AT1G07890 28.700 223 119 7 75 293 59 245 1.30e-13 69.7
MS.gene41567.t1 AT1G07890 28.700 223 119 7 75 293 59 245 1.30e-13 69.7
MS.gene41567.t1 AT1G07890 28.700 223 119 7 75 293 59 245 1.30e-13 69.7
MS.gene41567.t1 AT4G08390 23.571 280 173 8 20 293 116 360 1.56e-12 67.8
MS.gene41567.t1 AT4G08390 23.571 280 173 8 20 293 116 360 1.56e-12 67.8
MS.gene41567.t1 AT4G08390 23.571 280 173 8 20 293 116 360 1.56e-12 67.8
MS.gene41567.t1 AT4G08390 23.571 280 173 8 20 293 115 359 1.69e-12 67.8

Find 67 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTAGTGCTATGGTGAAAA+TGG 0.207916 3.1:+50440889 MS.gene41567:CDS
AAAGAGATGGTTGTCCTTTC+AGG 0.221896 3.1:+50440269 MS.gene41567:CDS
TGGCCGTTATTCCCGGTTAA+AGG 0.231977 3.1:-50440923 None:intergenic
TTTATGATAGAAAGGGCTTT+AGG 0.242653 3.1:-50438973 None:intergenic
CAATTATCTTCAGATTTCTA+TGG 0.243841 3.1:+50438940 MS.gene41567:CDS
TGATATTCCATCCCCTCTTA+TGG 0.297430 3.1:+50440199 MS.gene41567:CDS
ACGAATCTGGCCGTTATTCC+CGG 0.335428 3.1:-50440930 None:intergenic
TGACAACATTAAAACTCAAT+TGG 0.351916 3.1:+50439606 MS.gene41567:CDS
TTATGATAGAAAGGGCTTTA+GGG 0.357839 3.1:-50438972 None:intergenic
GGAAATCTCAGTCCTTTAAC+CGG 0.390312 3.1:+50440911 MS.gene41567:CDS
CAATTGACACCTGGCTTGTC+CGG 0.396982 3.1:-50440603 None:intergenic
TGCGGCAATTAGTACGAATC+TGG 0.400407 3.1:-50440943 None:intergenic
TGAAAGGACAACCATCTCTT+TGG 0.409369 3.1:-50440267 None:intergenic
CCAACATGGAGTGTTGGATT+AGG 0.409859 3.1:+50440134 MS.gene41567:CDS
AAATCTGTATAGAAAGTTGT+AGG 0.425690 3.1:-50440866 None:intergenic
AGTTGTAGGACTTGTGCTAT+AGG 0.433383 3.1:-50440852 None:intergenic
CAACGATTTAGTTAACTTTG+CGG 0.433402 3.1:-50440961 None:intergenic
GGTTGCAAAATTTGAATCAA+TGG 0.435863 3.1:-50440654 None:intergenic
TTGCTATCACCACCTGTACT+TGG 0.442974 3.1:-50440695 None:intergenic
CTGCAGTGTTTATGATAGAA+AGG 0.456023 3.1:-50438981 None:intergenic
GTGCATTGACAAAGCAATCA+TGG 0.468415 3.1:-50439062 None:intergenic
TGCATAGGTGCTCATACAAC+CGG 0.472398 3.1:+50440584 MS.gene41567:intron
AGCTTGAAGTGTCATCTAAT+AGG 0.475347 3.1:-50439525 None:intergenic
TGGTTGTCTCATTATAAATC+CGG 0.475695 3.1:-50440634 None:intergenic
TGCACCAGCCGACTTCTCTC+CGG 0.477310 3.1:-50439551 None:intergenic
CAAAGCAATCATGGAAATGA+AGG 0.492608 3.1:-50439053 None:intergenic
GCTAGTGCTATGGTGAAAAT+GGG 0.496755 3.1:+50440890 MS.gene41567:CDS
AGGTCACTAAGATCCATAAG+AGG 0.497849 3.1:-50440212 None:intergenic
GGCAGTATCTTTACTAGCAG+TGG 0.501994 3.1:-50440171 None:intergenic
CAATTGGAAACTGCTTGTCC+TGG 0.510442 3.1:+50439622 MS.gene41567:CDS
CTCAGTTGGGTGGTCCAACA+TGG 0.519896 3.1:+50440120 MS.gene41567:intron
AGTCCTTTAACCGGGAATAA+CGG 0.521082 3.1:+50440920 MS.gene41567:CDS
TGCAGTGTTTATGATAGAAA+GGG 0.526350 3.1:-50438980 None:intergenic
AAATCAAACTGTCCAAGTAC+AGG 0.528486 3.1:+50440683 MS.gene41567:CDS
GGTGTCAATTGTTCAGAGGC+CGG 0.528795 3.1:+50440615 MS.gene41567:CDS
CTCATACAACCGGACAAGCC+AGG 0.537911 3.1:+50440594 MS.gene41567:CDS
AGGGGATGGAATATCATTAG+TGG 0.539253 3.1:-50440192 None:intergenic
CTAAGATCCATAAGAGGGGA+TGG 0.539670 3.1:-50440206 None:intergenic
AATTTACTATCTCAGTTGGG+TGG 0.542773 3.1:+50440110 MS.gene41567:intron
GATGACACTTCAAGCTTCAC+CGG 0.544535 3.1:+50439532 MS.gene41567:CDS
GAAATATGAGGTTACCTGAA+AGG 0.547360 3.1:-50440283 None:intergenic
GGTGGTCCAACATGGAGTGT+TGG 0.550979 3.1:+50440128 MS.gene41567:CDS
AAGGACAACCATCTCTTTGG+TGG 0.552824 3.1:-50440264 None:intergenic
GGGATTTACCACCAAAGAGA+TGG 0.564115 3.1:+50440256 MS.gene41567:CDS
AGATAATTGAGCAAAGGCCA+TGG 0.564237 3.1:-50438926 None:intergenic
GCCTCTGAACAATTGACACC+TGG 0.564734 3.1:-50440612 None:intergenic
AAGCTTCACCGGAGAGAAGT+CGG 0.573162 3.1:+50439543 MS.gene41567:CDS
TTCACCGGAGAGAAGTCGGC+TGG 0.575709 3.1:+50439547 MS.gene41567:CDS
TCAGCACAAGAAACAACTCC+AGG 0.586737 3.1:-50439640 None:intergenic
GGTCACTAAGATCCATAAGA+GGG 0.589820 3.1:-50440211 None:intergenic
ATCTGAAGATAATTGAGCAA+AGG 0.594818 3.1:-50438932 None:intergenic
CCTAATCCAACACTCCATGT+TGG 0.600465 3.1:-50440134 None:intergenic
TGTTTCGAAAGAACATCGCA+TGG 0.605673 3.1:+50439014 MS.gene41567:CDS
GATCAACAACTCTTCAGTGG+TGG 0.610710 3.1:+50440806 MS.gene41567:CDS
AGCATTGTCAAATAGCACAT+TGG 0.616357 3.1:-50440741 None:intergenic
TTGTGACATCAAGTGAGGTA+AGG 0.618359 3.1:-50440718 None:intergenic
GCAAATGTAAATTCTCTCAG+AGG 0.619141 3.1:+50439571 MS.gene41567:CDS
GTTTCGAAAGAACATCGCAT+GGG 0.632231 3.1:+50439015 MS.gene41567:CDS
TGCTCGTGATGCTGTTGTAG+CGG 0.635557 3.1:+50439678 MS.gene41567:CDS
GCCAGGTGTCAATTGTTCAG+AGG 0.643723 3.1:+50440611 MS.gene41567:CDS
GAAATCTCAGTCCTTTAACC+GGG 0.649187 3.1:+50440912 MS.gene41567:CDS
TCTGATCAACAACTCTTCAG+TGG 0.652175 3.1:+50440803 MS.gene41567:CDS
TCAAACTGTCCAAGTACAGG+TGG 0.661430 3.1:+50440686 MS.gene41567:CDS
AGCAATCATGGAAATGAAGG+CGG 0.675421 3.1:-50439050 None:intergenic
ATTGGTTGTGACATCAAGTG+AGG 0.686079 3.1:-50440723 None:intergenic
GTCACTAAGATCCATAAGAG+GGG 0.687769 3.1:-50440210 None:intergenic
TGGACAGTTTGATTTCACTG+AGG 0.727605 3.1:-50440675 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTAATTAAGAAATATG+AGG - chr3.1:50440298-50440317 None:intergenic 10.0%
!!! AAATTATCTAAAACTTTTTA+AGG - chr3.1:50440058-50440077 None:intergenic 10.0%
!!! TAGAATTTTTTTTTGTTAAT+AGG + chr3.1:50439846-50439865 MS.gene41567:intron 10.0%
!! AAAAAATGTTAGTTAAAGTT+TGG - chr3.1:50440084-50440103 None:intergenic 15.0%
!! AAAAACTTGATCTTAATTAT+GGG - chr3.1:50440326-50440345 None:intergenic 15.0%
!! ATTTAACAAATTGAAATATG+TGG - chr3.1:50439902-50439921 None:intergenic 15.0%
!! TAAAAACTTGATCTTAATTA+TGG - chr3.1:50440327-50440346 None:intergenic 15.0%
!!! AAGATCAAGTTTTTAATATA+AGG + chr3.1:50440332-50440351 MS.gene41567:intron 15.0%
!! AAAACTTGATCTTAATTATG+GGG - chr3.1:50440325-50440344 None:intergenic 20.0%
!! AAGAATCTAGTTAACAAAAA+AGG + chr3.1:50440770-50440789 MS.gene41567:CDS 20.0%
!! ACATTAAGTGCTTATAAATA+AGG + chr3.1:50439742-50439761 MS.gene41567:intron 20.0%
!! ATGATATTTGTACAACTATT+TGG + chr3.1:50440520-50440539 MS.gene41567:intron 20.0%
!! TATCATTACTCTCAATAAAA+AGG - chr3.1:50440506-50440525 None:intergenic 20.0%
!!! ATCATATAATTGTAATTTGC+AGG + chr3.1:50439277-50439296 MS.gene41567:intron 20.0%
!!! GATTTTTTGTTTTGAAAACT+TGG + chr3.1:50440560-50440579 MS.gene41567:intron 20.0%
! AAATCTGTATAGAAAGTTGT+AGG - chr3.1:50440869-50440888 None:intergenic 25.0%
! ATTCACTATAGTACTAAGAT+TGG + chr3.1:50439971-50439990 MS.gene41567:intron 25.0%
! CAAGGATATTTGATATGTTA+GGG - chr3.1:50439789-50439808 None:intergenic 25.0%
! CAATTATCTTCAGATTTCTA+TGG + chr3.1:50438940-50438959 MS.gene41567:CDS 25.0%
! TGACAACATTAAAACTCAAT+TGG + chr3.1:50439606-50439625 MS.gene41567:CDS 25.0%
! TTCAATTTACTATCTCAGTT+GGG + chr3.1:50440107-50440126 MS.gene41567:intron 25.0%
!! CGTAGCAAACTTTTATATTA+CGG + chr3.1:50439308-50439327 MS.gene41567:intron 25.0%
!!! ATATCTGCTTTTTCAAACAA+GGG + chr3.1:50440236-50440255 MS.gene41567:CDS 25.0%
!!! TTTTTTTCTTTTAAAGAGCC+TGG + chr3.1:50439706-50439725 MS.gene41567:intron 25.0%
ATACCTGTAAATAGTACTCT+AGG + chr3.1:50439998-50440017 MS.gene41567:intron 30.0%
ATCTGAAGATAATTGAGCAA+AGG - chr3.1:50438935-50438954 None:intergenic 30.0%
GCAAGGATATTTGATATGTT+AGG - chr3.1:50439790-50439809 None:intergenic 30.0%
GGTTGCAAAATTTGAATCAA+TGG - chr3.1:50440657-50440676 None:intergenic 30.0%
GTTCAATTTACTATCTCAGT+TGG + chr3.1:50440106-50440125 MS.gene41567:intron 30.0%
TGATGTTTCATCTTGAATTG+CGG + chr3.1:50440473-50440492 MS.gene41567:intron 30.0%
TGCAGTGTTTATGATAGAAA+GGG - chr3.1:50438983-50439002 None:intergenic 30.0%
TGGTTGTCTCATTATAAATC+CGG - chr3.1:50440637-50440656 None:intergenic 30.0%
TGTTTGAAAAAGCAGATATG+AGG - chr3.1:50440235-50440254 None:intergenic 30.0%
TTATGATAGAAAGGGCTTTA+GGG - chr3.1:50438975-50438994 None:intergenic 30.0%
TTGAAAACGTAGTTACAATG+CGG + chr3.1:50440429-50440448 MS.gene41567:intron 30.0%
TTTATGATAGAAAGGGCTTT+AGG - chr3.1:50438976-50438995 None:intergenic 30.0%
!! ATGACGATTTTATAACTTGC+AGG + chr3.1:50439486-50439505 MS.gene41567:intron 30.0%
!! TGACGATTTTATAACTTGCA+GGG + chr3.1:50439487-50439506 MS.gene41567:intron 30.0%
!! TTTTGAAAACTTGGATGCAT+AGG + chr3.1:50440569-50440588 MS.gene41567:intron 30.0%
!!! CATATCTGCTTTTTCAAACA+AGG + chr3.1:50440235-50440254 MS.gene41567:CDS 30.0%
AAATCAAACTGTCCAAGTAC+AGG + chr3.1:50440683-50440702 MS.gene41567:CDS 35.0%
AAGGAATTACAGTCTCAAAC+CGG + chr3.1:50439761-50439780 MS.gene41567:intron 35.0%
AATTTACTATCTCAGTTGGG+TGG + chr3.1:50440110-50440129 MS.gene41567:intron 35.0%
AGATGGCAATAGATATTGCA+AGG - chr3.1:50439807-50439826 None:intergenic 35.0%
AGCATTGTCAAATAGCACAT+TGG - chr3.1:50440744-50440763 None:intergenic 35.0%
CAAAGCAATCATGGAAATGA+AGG - chr3.1:50439056-50439075 None:intergenic 35.0%
CAGAGAATTGCAATCAAATG+TGG + chr3.1:50440389-50440408 MS.gene41567:intron 35.0%
CTGCAGTGTTTATGATAGAA+AGG - chr3.1:50438984-50439003 None:intergenic 35.0%
GAAATATGAGGTTACCTGAA+AGG - chr3.1:50440286-50440305 None:intergenic 35.0%
GCAAATGTAAATTCTCTCAG+AGG + chr3.1:50439571-50439590 MS.gene41567:CDS 35.0%
TTCCATAAGTACAACTCAGA+TGG - chr3.1:50439824-50439843 None:intergenic 35.0%
TTTCAATGCGACTACAATTG+AGG - chr3.1:50440415-50440434 None:intergenic 35.0%
! AGCTTGAAGTGTCATCTAAT+AGG - chr3.1:50439528-50439547 None:intergenic 35.0%
! CAACCTAGAGTACTATTTAC+AGG - chr3.1:50440004-50440023 None:intergenic 35.0%
! TACAGATTTTGCTAGTGCTA+TGG + chr3.1:50440880-50440899 MS.gene41567:CDS 35.0%
!! TTTTCTTTTAAAGAGCCTGG+CGG + chr3.1:50439709-50439728 MS.gene41567:intron 35.0%
AAAGAGATGGTTGTCCTTTC+AGG + chr3.1:50440269-50440288 MS.gene41567:CDS 40.0%
AGCAATCATGGAAATGAAGG+CGG - chr3.1:50439053-50439072 None:intergenic 40.0%
AGGGGATGGAATATCATTAG+TGG - chr3.1:50440195-50440214 None:intergenic 40.0%
AGGTCACTAAGATCCATAAG+AGG - chr3.1:50440215-50440234 None:intergenic 40.0%
AGTCCTTTAACCGGGAATAA+CGG + chr3.1:50440920-50440939 MS.gene41567:CDS 40.0%
AGTTGTAGGACTTGTGCTAT+AGG - chr3.1:50440855-50440874 None:intergenic 40.0%
ATTGGTTGTGACATCAAGTG+AGG - chr3.1:50440726-50440745 None:intergenic 40.0%
CGGTAAAATGCAGACAAATG+CGG + chr3.1:50439328-50439347 MS.gene41567:intron 40.0%
GAAATCTCAGTCCTTTAACC+GGG + chr3.1:50440912-50440931 MS.gene41567:CDS 40.0%
GCTAGTGCTATGGTGAAAAT+GGG + chr3.1:50440890-50440909 MS.gene41567:CDS 40.0%
GGAAATCTCAGTCCTTTAAC+CGG + chr3.1:50440911-50440930 MS.gene41567:CDS 40.0%
GGTCACTAAGATCCATAAGA+GGG - chr3.1:50440214-50440233 None:intergenic 40.0%
GTCACTAAGATCCATAAGAG+GGG - chr3.1:50440213-50440232 None:intergenic 40.0%
GTTTCGAAAGAACATCGCAT+GGG + chr3.1:50439015-50439034 MS.gene41567:CDS 40.0%
TATTTGATATGTTAGGGCGC+CGG - chr3.1:50439783-50439802 None:intergenic 40.0%
TCTGATCAACAACTCTTCAG+TGG + chr3.1:50440803-50440822 MS.gene41567:CDS 40.0%
TGAAAGGACAACCATCTCTT+TGG - chr3.1:50440270-50440289 None:intergenic 40.0%
TGATATTCCATCCCCTCTTA+TGG + chr3.1:50440199-50440218 MS.gene41567:CDS 40.0%
TGCCATCTGAGTTGTACTTA+TGG + chr3.1:50439819-50439838 MS.gene41567:intron 40.0%
TGCTAGTGCTATGGTGAAAA+TGG + chr3.1:50440889-50440908 MS.gene41567:CDS 40.0%
TGTTTCGAAAGAACATCGCA+TGG + chr3.1:50439014-50439033 MS.gene41567:CDS 40.0%
TTGCAGTACAGCTACAATTG+TGG - chr3.1:50439443-50439462 None:intergenic 40.0%
TTGTGACATCAAGTGAGGTA+AGG - chr3.1:50440721-50440740 None:intergenic 40.0%
! GTGCATTGACAAAGCAATCA+TGG - chr3.1:50439065-50439084 None:intergenic 40.0%
! TGGACAGTTTGATTTCACTG+AGG - chr3.1:50440678-50440697 None:intergenic 40.0%
AAGGACAACCATCTCTTTGG+TGG - chr3.1:50440267-50440286 None:intergenic 45.0%
AGTGTTTGTTTCGCGATCCT+AGG + chr3.1:50440362-50440381 MS.gene41567:intron 45.0%
CAATTGGAAACTGCTTGTCC+TGG + chr3.1:50439622-50439641 MS.gene41567:CDS 45.0%
CCTAATCCAACACTCCATGT+TGG - chr3.1:50440137-50440156 None:intergenic 45.0%
CTAAGATCCATAAGAGGGGA+TGG - chr3.1:50440209-50440228 None:intergenic 45.0%
GATCAACAACTCTTCAGTGG+TGG + chr3.1:50440806-50440825 MS.gene41567:CDS 45.0%
GATGACACTTCAAGCTTCAC+CGG + chr3.1:50439532-50439551 MS.gene41567:CDS 45.0%
GGCAGTATCTTTACTAGCAG+TGG - chr3.1:50440174-50440193 None:intergenic 45.0%
GGGATTTACCACCAAAGAGA+TGG + chr3.1:50440256-50440275 MS.gene41567:CDS 45.0%
TCAAACTGTCCAAGTACAGG+TGG + chr3.1:50440686-50440705 MS.gene41567:CDS 45.0%
TCAGCACAAGAAACAACTCC+AGG - chr3.1:50439643-50439662 None:intergenic 45.0%
TGCATAGGTGCTCATACAAC+CGG + chr3.1:50440584-50440603 MS.gene41567:intron 45.0%
TGCGGCAATTAGTACGAATC+TGG - chr3.1:50440946-50440965 None:intergenic 45.0%
TTGCTATCACCACCTGTACT+TGG - chr3.1:50440698-50440717 None:intergenic 45.0%
!! CCAACATGGAGTGTTGGATT+AGG + chr3.1:50440134-50440153 MS.gene41567:CDS 45.0%
!! ATATATATATATATATATAG+TGG - chr3.1:50439210-50439229 None:intergenic 5.0%
!!! TATATTATTTTTTTTTTTGA+GGG + chr3.1:50439396-50439415 MS.gene41567:intron 5.0%
!!! TTATATTATTTTTTTTTTTG+AGG + chr3.1:50439395-50439414 MS.gene41567:intron 5.0%
AAGCTTCACCGGAGAGAAGT+CGG + chr3.1:50439543-50439562 MS.gene41567:CDS 50.0%
AATGTGTGAGTTTAGCCGCC+AGG - chr3.1:50439727-50439746 None:intergenic 50.0%
ACGAATCTGGCCGTTATTCC+CGG - chr3.1:50440933-50440952 None:intergenic 50.0%
GCCAGGTGTCAATTGTTCAG+AGG + chr3.1:50440611-50440630 MS.gene41567:CDS 50.0%
GCCTCTGAACAATTGACACC+TGG - chr3.1:50440615-50440634 None:intergenic 50.0%
GGTGTCAATTGTTCAGAGGC+CGG + chr3.1:50440615-50440634 MS.gene41567:CDS 50.0%
TGCTCGTGATGCTGTTGTAG+CGG + chr3.1:50439678-50439697 MS.gene41567:CDS 50.0%
TGGCCGTTATTCCCGGTTAA+AGG - chr3.1:50440926-50440945 None:intergenic 50.0%
TTGCAATTCTCTGCGAGCCT+AGG - chr3.1:50440382-50440401 None:intergenic 50.0%
! CAATTGACACCTGGCTTGTC+CGG - chr3.1:50440606-50440625 None:intergenic 50.0%
CTCAGTTGGGTGGTCCAACA+TGG + chr3.1:50440120-50440139 MS.gene41567:intron 55.0%
CTCATACAACCGGACAAGCC+AGG + chr3.1:50440594-50440613 MS.gene41567:CDS 55.0%
GACAAATGCGGCTGCAGTTG+CGG + chr3.1:50439340-50439359 MS.gene41567:intron 55.0%
GGTGGTCCAACATGGAGTGT+TGG + chr3.1:50440128-50440147 MS.gene41567:CDS 55.0%
TTCACCGGAGAGAAGTCGGC+TGG + chr3.1:50439547-50439566 MS.gene41567:CDS 60.0%
! TGCACCAGCCGACTTCTCTC+CGG - chr3.1:50439554-50439573 None:intergenic 60.0%
ATGCGGCTGCAGTTGCGGCT+AGG + chr3.1:50439345-50439364 MS.gene41567:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 50438928 50440976 50438928 ID=MS.gene41567
chr3.1 mRNA 50438928 50440976 50438928 ID=MS.gene41567.t1;Parent=MS.gene41567
chr3.1 exon 50438928 50439119 50438928 ID=MS.gene41567.t1.exon1;Parent=MS.gene41567.t1
chr3.1 CDS 50438928 50439119 50438928 ID=cds.MS.gene41567.t1;Parent=MS.gene41567.t1
chr3.1 exon 50439508 50439699 50439508 ID=MS.gene41567.t1.exon2;Parent=MS.gene41567.t1
chr3.1 CDS 50439508 50439699 50439508 ID=cds.MS.gene41567.t1;Parent=MS.gene41567.t1
chr3.1 exon 50440125 50440290 50440125 ID=MS.gene41567.t1.exon3;Parent=MS.gene41567.t1
chr3.1 CDS 50440125 50440290 50440125 ID=cds.MS.gene41567.t1;Parent=MS.gene41567.t1
chr3.1 exon 50440591 50440976 50440591 ID=MS.gene41567.t1.exon4;Parent=MS.gene41567.t1
chr3.1 CDS 50440591 50440976 50440591 ID=cds.MS.gene41567.t1;Parent=MS.gene41567.t1
Gene Sequence

>MS.gene41567

ATGGCCTTTGCTCAATTATCTTCAGATTTCTATGGAACAACATGCCCTAAAGCCCTTTCTATCATAAACACTGCAGTGTGTAGTGCTGTTTCGAAAGAACATCGCATGGGCGCTTCATTGCTCCGCCTTCATTTCCATGATTGCTTTGTCAATGCACGTTCTTTCTTCTCTCTAGCTAACATATTCATGCATGTAATATAAGTGCATGCATTATTCATATGACTTTGCTCGCATGAATTCAACATGCACGTGTGACTAAGATAATAAATTAAATATTTACCACTATATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATATATGATCATATAATTGTAATTTGCAGGCATAGTTACGTAGCAAACTTTTATATTACGGTAAAATGCAGACAAATGCGGCTGCAGTTGCGGCTAGGTTGCATTTGTAAAGACTATTAAAATTGTTATATTATTTTTTTTTTTGAGGGATTAAAATTGTTATATTGTCGCCACAATTGTAGCTGTACTGCAATTGTAGAGAAAATTGTATCTTCAATGACGATTTTATAACTTGCAGGGATGTGATGCATCAGTCCTATTAGATGACACTTCAAGCTTCACCGGAGAGAAGTCGGCTGGTGCAAATGTAAATTCTCTCAGAGGTTTTGATGTGATTGACAACATTAAAACTCAATTGGAAACTGCTTGTCCTGGAGTTGTTTCTTGTGCTGATATTGTTGCAGCTGCTGCTCGTGATGCTGTTGTAGCGGTAAGTTTTTTTTCTTTTAAAGAGCCTGGCGGCTAAACTCACACATTAAGTGCTTATAAATAAGGAATTACAGTCTCAAACCGGCGCCCTAACATATCAAATATCCTTGCAATATCTATTGCCATCTGAGTTGTACTTATGGAACATAGAATTTTTTTTTGTTAATAGGCAAGATAAATGAAAAAAATAATAGTGTATTCCACATATTTCAATTTGTTAAATTTAAAAAAGTATTATAATATGCAAAATATAGAAACAAATTGAAGTTATTATTCACTATAGTACTAAGATTGGATTTATACCTGTAAATAGTACTCTAGGTTGACAATTTGAATTTTATGTCAAAAAATTCAAACCTTAAAAAGTTTTAGATAATTTAAACCAAACTTTAACTAACATTTTTTGTGTTCAATTTACTATCTCAGTTGGGTGGTCCAACATGGAGTGTTGGATTAGGTAGAAGAGATTCAACCACTGCTAGTAAAGATACTGCCACTAATGATATTCCATCCCCTCTTATGGATCTTAGTGACCTCATATCTGCTTTTTCAAACAAGGGATTTACCACCAAAGAGATGGTTGTCCTTTCAGGTAACCTCATATTTCTTAATTAATTAATTAACCCCATAATTAAGATCAAGTTTTTAATATAAGGTTGCAATAGTGTTTGTTTCGCGATCCTAGGCTCGCAGAGAATTGCAATCAAATGTGGCCTCAATTGTAGTCGCATTGAAAACGTAGTTACAATGCGGTCGCAGAGACATCAAATGTTATGATGTTTCATCTTGAATTGCGGTCACGAACCTTTTTATTGAGAGTAATGATATTTGTACAACTATTTGGTGATAGCATTTTCTAATGATTTTTTGTTTTGAAAACTTGGATGCATAGGTGCTCATACAACCGGACAAGCCAGGTGTCAATTGTTCAGAGGCCGGATTTATAATGAGACAACCATTGATTCAAATTTTGCAACCTCAGTGAAATCAAACTGTCCAAGTACAGGTGGTGATAGCAACCTTACCTCACTTGATGTCACAACCAATGTGCTATTTGACAATGCTTATTTCAAGAATCTAGTTAACAAAAAAGGACTTTTACATTCTGATCAACAACTCTTCAGTGGTGGTTCTACTGACTCTCAAGTCACTACCTATAGCACAAGTCCTACAACTTTCTATACAGATTTTGCTAGTGCTATGGTGAAAATGGGAAATCTCAGTCCTTTAACCGGGAATAACGGCCAGATTCGTACTAATTGCCGCAAAGTTAACTAA
Protein sequence

>MS.gene41567.t1

MAFAQLSSDFYGTTCPKALSIINTAVCSAVSKEHRMGASLLRLHFHDCFVNARSFFSLANIFMHGCDASVLLDDTSSFTGEKSAGANVNSLRGFDVIDNIKTQLETACPGVVSCADIVAAAARDAVVALGGPTWSVGLGRRDSTTASKDTATNDIPSPLMDLSDLISAFSNKGFTTKEMVVLSGAHTTGQARCQLFRGRIYNETTIDSNFATSVKSNCPSTGGDSNLTSLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPTTFYTDFASAMVKMGNLSPLTGNNGQIRTNCRKVN