AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42687

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42687.t1 MTR_3g104930 96.296 729 19 2 1 728 42 763 0.0 1430
MS.gene42687.t1 MTR_3g114420 80.632 728 137 4 1 727 41 765 0.0 1162
MS.gene42687.t1 MTR_3g464790 78.767 730 117 5 1 728 40 733 0.0 1104
MS.gene42687.t1 MTR_3g114410 76.796 543 122 4 1 542 41 580 0.0 831
MS.gene42687.t1 MTR_8g042710 48.422 729 352 12 15 728 46 765 0.0 664
MS.gene42687.t1 MTR_8g042670 48.148 729 360 10 5 728 44 759 0.0 657
MS.gene42687.t1 MTR_8g042670 49.042 626 307 7 104 728 21 635 0.0 575
MS.gene42687.t1 MTR_4g053630 43.127 742 365 18 14 723 10 726 0.0 543
MS.gene42687.t1 MTR_4g134320 42.255 736 384 14 11 726 51 765 0.0 542
MS.gene42687.t1 MTR_8g072440 40.946 740 380 20 11 728 50 754 0.0 542
MS.gene42687.t1 MTR_7g098070 42.838 733 375 17 15 726 52 761 0.0 540
MS.gene42687.t1 MTR_5g025010 40.268 745 397 18 2 728 37 751 0.0 540
MS.gene42687.t1 MTR_5g025010 40.268 745 397 18 2 728 5 719 0.0 540
MS.gene42687.t1 MTR_8g072440 41.564 729 370 20 21 728 19 712 0.0 540
MS.gene42687.t1 MTR_8g042710 50.802 561 256 8 15 561 46 600 0.0 536
MS.gene42687.t1 MTR_5g096750 41.565 741 378 14 13 728 56 766 1.71e-175 521
MS.gene42687.t1 MTR_4g053630 44.643 672 330 16 69 723 3 649 2.85e-175 517
MS.gene42687.t1 MTR_3g082200 41.803 732 387 17 15 726 57 769 2.76e-174 518
MS.gene42687.t1 MTR_8g083220 42.449 735 383 16 12 726 60 774 9.07e-174 517
MS.gene42687.t1 MTR_4g053635 43.022 695 353 17 45 723 2 669 1.64e-172 510
MS.gene42687.t1 MTR_4g103430 41.113 737 391 16 15 728 54 770 3.25e-172 513
MS.gene42687.t1 MTR_4g103480 40.731 739 388 15 15 726 71 786 1.74e-170 509
MS.gene42687.t1 MTR_4g103400 40.891 741 391 17 15 726 54 776 2.27e-170 508
MS.gene42687.t1 MTR_4g103450 41.033 736 384 15 15 723 28 740 5.58e-170 506
MS.gene42687.t1 MTR_2g042130 41.259 715 383 17 30 726 77 772 9.44e-168 502
MS.gene42687.t1 MTR_7g075900 42.142 719 369 18 30 727 80 772 9.88e-165 494
MS.gene42687.t1 MTR_4g103490 40.349 746 391 17 15 726 58 783 1.01e-164 494
MS.gene42687.t1 MTR_4g073540 40.466 729 380 18 30 727 63 768 2.69e-163 490
MS.gene42687.t1 MTR_5g016120 42.120 736 377 21 15 727 52 761 2.88e-163 489
MS.gene42687.t1 MTR_0047s0120 42.432 740 373 24 13 727 46 757 1.07e-162 488
MS.gene42687.t1 MTR_5g085690 39.919 744 405 15 15 726 55 788 3.58e-162 488
MS.gene42687.t1 MTR_8g021130 41.185 726 374 21 26 723 71 771 9.67e-160 481
MS.gene42687.t1 MTR_6g055570 40.470 724 369 18 15 726 56 729 4.20e-159 478
MS.gene42687.t1 MTR_3g061110 39.781 729 392 17 15 726 54 752 4.81e-159 478
MS.gene42687.t1 MTR_3g082200 43.058 641 330 15 102 726 25 646 1.24e-158 474
MS.gene42687.t1 MTR_8g022870 40.781 743 388 18 19 728 54 777 1.95e-158 478
MS.gene42687.t1 MTR_1g048110 40.305 722 378 22 15 728 56 732 1.98e-158 476
MS.gene42687.t1 MTR_8g033150 40.582 722 384 18 15 726 38 724 1.09e-157 474
MS.gene42687.t1 MTR_7g104200 40.548 730 370 22 15 726 58 741 1.57e-157 474
MS.gene42687.t1 MTR_7g034380 39.917 724 379 19 15 728 16 693 2.16e-157 472
MS.gene42687.t1 MTR_8g033150 40.582 722 384 18 15 726 65 751 2.41e-157 474
MS.gene42687.t1 MTR_1g102350 39.972 723 391 18 26 727 77 777 1.50e-156 473
MS.gene42687.t1 MTR_8g006680 39.184 735 382 23 9 728 40 724 8.47e-156 469
MS.gene42687.t1 MTR_8g005300 39.184 735 382 23 9 728 40 724 8.47e-156 469
MS.gene42687.t1 MTR_8g005640 39.184 735 382 23 9 728 40 724 8.47e-156 469
MS.gene42687.t1 MTR_3g082200 42.970 633 326 15 110 726 18 631 1.10e-155 466
MS.gene42687.t1 MTR_7g098630 40.443 722 378 18 30 726 66 760 2.11e-155 473
MS.gene42687.t1 MTR_2g018135 39.012 769 391 24 10 728 44 784 1.13e-154 468
MS.gene42687.t1 MTR_2g018125 39.108 762 388 21 15 728 52 785 1.93e-153 465
MS.gene42687.t1 MTR_4g095360 39.227 724 382 20 30 727 64 755 6.16e-153 463
MS.gene42687.t1 MTR_3g102810 38.315 736 412 14 14 727 40 755 1.82e-152 461
MS.gene42687.t1 MTR_4g103495 41.074 689 372 14 10 679 50 723 4.13e-152 461
MS.gene42687.t1 MTR_1g018510 38.441 744 404 19 14 727 7 726 1.21e-151 458
MS.gene42687.t1 MTR_4g125180 39.696 723 383 16 30 727 58 752 1.26e-151 459
MS.gene42687.t1 MTR_1g006990 39.774 709 378 20 27 728 70 736 2.20e-151 458
MS.gene42687.t1 MTR_1g007030 38.804 719 395 18 15 728 56 734 2.52e-151 458
MS.gene42687.t1 MTR_7g081420 39.491 747 391 24 15 723 58 781 2.30e-150 457
MS.gene42687.t1 MTR_7g081750 38.482 764 395 24 15 726 57 797 2.73e-150 457
MS.gene42687.t1 MTR_8g079900 38.851 731 401 20 6 726 47 741 4.15e-150 455
MS.gene42687.t1 MTR_6g055410 38.750 720 369 19 15 726 56 711 5.54e-150 454
MS.gene42687.t1 MTR_7g081580 38.963 752 393 23 15 726 58 783 9.42e-150 456
MS.gene42687.t1 MTR_5g055920 40.000 650 350 11 98 726 36 666 1.84e-149 451
MS.gene42687.t1 MTR_3g010080 38.345 725 390 19 15 728 55 733 5.83e-149 452
MS.gene42687.t1 MTR_7g081500 40.134 745 388 22 15 723 57 779 1.44e-147 450
MS.gene42687.t1 MTR_7g075890 40.480 709 376 20 27 726 226 897 1.12e-146 451
MS.gene42687.t1 MTR_4g102400 40.303 727 385 19 15 728 64 754 5.15e-146 445
MS.gene42687.t1 MTR_3g114160 62.690 394 97 8 26 417 3 348 3.16e-144 427
MS.gene42687.t1 MTR_8g005710 37.997 729 389 21 15 726 16 698 2.05e-143 436
MS.gene42687.t1 MTR_7g481600 39.247 744 402 23 15 726 58 783 1.97e-142 437
MS.gene42687.t1 MTR_8g079900 39.556 675 366 18 59 726 4 643 2.59e-141 429
MS.gene42687.t1 MTR_7g081380 38.802 768 389 25 15 723 58 803 3.97e-140 431
MS.gene42687.t1 MTR_4g103495 40.973 637 344 14 110 728 3 625 4.26e-140 425
MS.gene42687.t1 MTR_7g079300 38.728 723 389 22 25 726 76 765 1.03e-139 429
MS.gene42687.t1 MTR_7g079310 38.897 725 388 19 24 726 72 763 1.14e-139 429
MS.gene42687.t1 MTR_5g011280 39.301 715 386 21 21 724 76 753 4.95e-139 427
MS.gene42687.t1 MTR_1g079120 38.462 741 381 23 14 726 67 760 1.60e-138 426
MS.gene42687.t1 MTR_8g024380 39.481 732 361 23 30 728 78 760 2.78e-138 425
MS.gene42687.t1 MTR_3g114140 79.167 264 48 2 427 686 162 422 1.17e-136 409
MS.gene42687.t1 MTR_3g114140 63.068 176 39 1 151 326 12 161 1.38e-58 204
MS.gene42687.t1 MTR_5g011190 40.762 709 374 22 26 723 77 750 2.53e-136 420
MS.gene42687.t1 MTR_8g024420 37.964 727 381 23 30 727 37 722 1.43e-135 417
MS.gene42687.t1 MTR_1g078110 38.728 723 373 23 30 727 77 754 1.99e-134 415
MS.gene42687.t1 MTR_5g011370 40.709 705 372 22 30 723 101 770 7.53e-134 414
MS.gene42687.t1 MTR_8g024390 38.154 726 383 22 30 727 71 758 8.76e-134 414
MS.gene42687.t1 MTR_5g011260 39.130 713 386 20 25 728 80 753 1.27e-133 412
MS.gene42687.t1 MTR_5g011340 39.492 709 383 21 26 723 74 747 5.27e-131 406
MS.gene42687.t1 MTR_8g024370 39.320 735 365 22 30 727 67 757 6.34e-131 406
MS.gene42687.t1 MTR_5g011320 38.990 713 380 21 26 723 70 742 2.40e-130 404
MS.gene42687.t1 MTR_5g011310 39.007 705 384 20 30 723 81 750 1.55e-128 399
MS.gene42687.t1 MTR_2g044630 36.170 705 376 18 27 726 70 705 1.56e-127 395
MS.gene42687.t1 MTR_7g118080 36.364 726 388 19 30 727 77 756 1.14e-126 395
MS.gene42687.t1 MTR_5g011270 39.271 713 385 19 25 728 80 753 2.50e-126 394
MS.gene42687.t1 MTR_2g042640 37.879 660 310 19 34 688 46 610 1.04e-123 382
MS.gene42687.t1 MTR_2g049200 37.483 731 379 26 30 727 71 756 1.24e-122 384
MS.gene42687.t1 MTR_4g071560 41.187 556 259 12 10 544 13 521 3.21e-122 376
MS.gene42687.t1 MTR_3g452290 34.712 677 323 17 58 726 3 568 1.13e-118 368
MS.gene42687.t1 MTR_3g451220 34.712 677 323 17 58 726 3 568 1.13e-118 368
MS.gene42687.t1 MTR_4g127480 31.410 780 433 30 11 725 70 812 7.36e-92 305
MS.gene42687.t1 MTR_2g042650 31.768 724 355 21 12 728 53 644 1.33e-90 297
MS.gene42687.t1 MTR_6g075370 42.553 376 196 6 10 378 49 411 2.05e-90 297
MS.gene42687.t1 MTR_6g075370 40.000 245 129 8 452 692 424 654 4.60e-40 157
MS.gene42687.t1 MTR_5g081100 39.421 449 210 9 28 472 36 426 8.36e-88 283
MS.gene42687.t1 MTR_2g037850 30.040 749 432 23 11 701 70 784 2.97e-82 278
MS.gene42687.t1 MTR_3g114400 74.860 179 29 2 549 727 1 163 1.45e-81 256
MS.gene42687.t1 MTR_8g027260 48.852 305 134 8 15 316 56 341 3.04e-80 269
MS.gene42687.t1 MTR_8g027260 36.156 307 180 7 423 726 358 651 3.21e-46 175
MS.gene42687.t1 MTR_4g132620 30.612 735 434 20 2 684 63 773 2.20e-79 271
MS.gene42687.t1 MTR_2g046740 30.217 738 429 26 11 688 90 801 5.31e-74 256
MS.gene42687.t1 MTR_8g089230 29.570 744 446 27 11 699 98 818 3.33e-71 249
MS.gene42687.t1 MTR_7g079295 45.638 298 146 7 24 314 74 362 2.61e-67 231
MS.gene42687.t1 MTR_7g079295 34.337 166 97 6 565 726 352 509 6.73e-16 81.6
MS.gene42687.t1 MTR_5g081280 40.203 296 134 8 15 306 41 297 1.00e-62 212
MS.gene42687.t1 MTR_2g070250 38.746 351 168 13 119 466 98 404 1.17e-56 199
MS.gene42687.t1 MTR_8g092940 44.037 218 106 5 28 245 26 227 5.45e-48 169
MS.gene42687.t1 MTR_4g126230 33.333 249 146 8 412 654 14 248 4.37e-30 119
MS.gene42687.t1 MTR_4g053665 34.387 253 120 7 471 723 1 207 2.35e-29 116
MS.gene42687.t1 MTR_2g070260 31.863 204 117 4 511 703 1 193 5.70e-28 112
MS.gene42687.t1 MTR_5g044060 43.411 129 68 3 445 569 6 133 2.59e-20 89.4
MS.gene42687.t1 MTR_5g081130 30.159 189 113 5 540 726 1 172 1.07e-17 82.4
MS.gene42687.t1 MTR_7g081660 37.037 189 106 8 541 726 374 552 5.85e-17 85.5
MS.gene42687.t1 MTR_8g027660 31.156 199 100 8 535 727 80 247 2.39e-13 71.2
MS.gene42687.t1 MTR_3g005755 38.947 95 49 3 486 571 214 308 2.00e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42687.t1 AT1G20160 59.437 710 286 2 18 727 16 723 0.0 857
MS.gene42687.t1 AT1G20160 59.437 710 286 2 18 727 55 762 0.0 857
MS.gene42687.t1 AT1G20150 51.413 743 337 9 1 727 37 771 0.0 754
MS.gene42687.t1 AT1G20160 60.659 455 178 1 18 472 55 508 0.0 561
MS.gene42687.t1 AT2G04160 42.780 741 380 16 11 728 53 772 0.0 548
MS.gene42687.t1 AT5G59100 40.556 720 386 16 14 726 53 737 2.13e-175 520
MS.gene42687.t1 AT5G59810 41.226 718 383 17 27 728 82 776 7.78e-171 509
MS.gene42687.t1 AT5G59120 42.105 722 365 18 14 726 50 727 6.33e-170 506
MS.gene42687.t1 AT5G59090 41.289 729 361 20 14 726 51 728 3.68e-169 504
MS.gene42687.t1 AT5G59090 41.289 729 356 20 14 726 51 723 9.60e-169 503
MS.gene42687.t1 AT5G59090 41.289 729 359 21 14 726 51 726 1.00e-167 500
MS.gene42687.t1 AT5G67360 40.574 732 392 20 15 727 48 755 9.39e-165 493
MS.gene42687.t1 AT3G14240 41.152 729 382 18 29 728 61 771 9.99e-165 494
MS.gene42687.t1 AT2G05920 41.331 721 378 19 26 727 56 750 4.65e-163 489
MS.gene42687.t1 AT4G34980 41.153 746 386 20 10 727 39 759 7.52e-163 489
MS.gene42687.t1 AT3G46840 42.302 721 367 23 15 726 54 734 6.46e-162 485
MS.gene42687.t1 AT3G46850 40.797 728 369 21 15 726 53 734 1.14e-160 482
MS.gene42687.t1 AT5G59130 39.643 729 365 20 15 726 16 686 5.88e-158 474
MS.gene42687.t1 AT5G59130 39.643 729 365 20 15 726 55 725 1.56e-157 474
MS.gene42687.t1 AT4G10540 40.162 742 390 20 11 724 46 761 4.76e-157 474
MS.gene42687.t1 AT3G14067 38.965 734 401 17 15 723 53 764 6.93e-156 471
MS.gene42687.t1 AT5G45650 39.249 772 391 21 11 728 43 790 1.45e-155 471
MS.gene42687.t1 AT5G45650 39.249 772 391 21 11 728 43 790 1.45e-155 471
MS.gene42687.t1 AT5G51750 39.638 719 399 17 26 727 75 775 7.27e-155 469
MS.gene42687.t1 AT5G59130 39.452 730 361 22 15 726 55 721 1.24e-154 466
MS.gene42687.t1 AT1G32950 40.650 738 389 18 11 723 45 758 2.73e-154 467
MS.gene42687.t1 AT1G32950 40.928 733 377 18 13 723 9 707 8.42e-154 464
MS.gene42687.t1 AT5G59130 39.861 720 366 20 15 726 55 715 4.91e-153 462
MS.gene42687.t1 AT4G10510 40.617 746 379 23 11 724 38 751 1.55e-152 462
MS.gene42687.t1 AT4G10510 40.617 746 379 23 11 724 50 763 1.96e-152 462
MS.gene42687.t1 AT5G58840 39.972 718 359 17 15 726 55 706 3.63e-152 459
MS.gene42687.t1 AT4G10510 40.866 739 373 23 18 724 1 707 7.69e-152 459
MS.gene42687.t1 AT5G58830 39.752 727 351 20 14 726 52 705 1.17e-151 458
MS.gene42687.t1 AT4G10550 39.814 751 379 23 11 724 50 764 1.49e-151 460
MS.gene42687.t1 AT4G10550 39.867 750 380 22 11 724 66 780 1.93e-151 460
MS.gene42687.t1 AT4G10510 41.160 724 365 22 30 724 1 692 2.27e-151 457
MS.gene42687.t1 AT4G10550 40.054 744 373 23 18 724 1 708 4.66e-151 457
MS.gene42687.t1 AT4G10550 40.054 744 373 23 18 724 1 708 4.66e-151 457
MS.gene42687.t1 AT5G58820 40.284 705 349 18 27 726 63 700 6.48e-151 456
MS.gene42687.t1 AT1G32940 39.834 723 382 19 27 723 13 708 1.76e-150 455
MS.gene42687.t1 AT1G32940 39.834 723 382 19 27 723 13 708 1.76e-150 455
MS.gene42687.t1 AT1G32960 39.783 739 397 19 11 724 48 763 1.77e-150 457
MS.gene42687.t1 AT1G32940 39.218 742 395 20 11 723 45 759 1.81e-150 457
MS.gene42687.t1 AT5G03620 38.852 749 381 26 13 726 52 758 8.56e-149 452
MS.gene42687.t1 AT5G59190 39.372 701 375 17 30 725 32 687 2.47e-148 449
MS.gene42687.t1 AT4G00230 40.466 729 380 21 13 726 54 743 2.80e-148 451
MS.gene42687.t1 AT4G15040 38.843 726 374 22 15 726 16 685 1.20e-145 442
MS.gene42687.t1 AT4G15040 38.843 726 374 22 15 726 16 685 1.20e-145 442
MS.gene42687.t1 AT1G04110 38.904 730 387 20 30 728 71 772 2.46e-145 444
MS.gene42687.t1 AT1G66220 37.769 744 377 21 11 723 53 741 3.66e-144 440
MS.gene42687.t1 AT1G66210 38.043 736 391 19 11 724 56 748 5.09e-144 440
MS.gene42687.t1 AT4G10520 38.115 732 401 19 10 723 44 741 8.51e-144 439
MS.gene42687.t1 AT4G26330 38.608 733 392 19 27 728 18 723 1.25e-143 438
MS.gene42687.t1 AT1G01900 40.167 717 379 21 34 727 83 772 9.69e-141 432
MS.gene42687.t1 AT4G21640 38.089 743 347 22 15 723 61 724 4.09e-140 429
MS.gene42687.t1 AT4G26330 37.885 747 392 20 27 728 18 737 8.04e-140 429
MS.gene42687.t1 AT4G21650 37.483 747 379 22 15 723 61 757 9.60e-136 419
MS.gene42687.t1 AT4G21630 37.281 743 381 21 15 723 59 750 4.47e-135 417
MS.gene42687.t1 AT4G10530 36.364 737 398 21 10 723 44 732 6.74e-132 408
MS.gene42687.t1 AT5G11940 36.828 744 386 23 15 724 57 750 2.72e-130 404
MS.gene42687.t1 AT5G45640 35.475 747 417 19 27 728 27 753 5.09e-130 403
MS.gene42687.t1 AT4G21323 36.549 736 409 21 11 726 96 793 3.23e-129 403
MS.gene42687.t1 AT5G58840 43.258 534 246 12 15 545 55 534 2.60e-126 387
MS.gene42687.t1 AT4G21326 36.589 727 399 18 18 724 1 685 5.75e-125 388
MS.gene42687.t1 AT5G03620 42.703 555 264 19 13 543 52 576 2.88e-124 383
MS.gene42687.t1 AT1G32940 40.140 573 296 16 11 555 45 598 1.10e-119 372
MS.gene42687.t1 AT4G00230 43.094 543 268 15 13 542 54 568 1.37e-118 369
MS.gene42687.t1 AT5G67090 34.897 725 382 24 19 713 49 713 1.33e-115 365
MS.gene42687.t1 AT1G32970 36.453 716 370 25 45 723 52 719 2.23e-108 346
MS.gene42687.t1 AT5G58840 42.391 460 209 11 15 472 55 460 2.73e-102 322
MS.gene42687.t1 AT2G19170 33.333 711 381 24 11 659 66 745 6.89e-96 315
MS.gene42687.t1 AT2G19170 33.333 711 381 24 11 659 66 745 6.89e-96 315
MS.gene42687.t1 AT4G30020 32.138 753 413 27 11 701 66 782 7.15e-93 307
MS.gene42687.t1 AT4G30020 32.138 753 413 27 11 701 66 782 7.15e-93 307
MS.gene42687.t1 AT4G30020 32.138 753 413 27 11 701 66 782 7.15e-93 307
MS.gene42687.t1 AT4G30020 32.138 753 413 27 11 701 66 782 7.15e-93 307
MS.gene42687.t1 AT2G39850 31.613 775 411 33 15 726 47 765 2.54e-92 305
MS.gene42687.t1 AT1G30600 30.515 757 448 25 10 711 77 810 4.19e-82 278
MS.gene42687.t1 AT1G62340 29.140 779 458 28 11 724 78 827 1.36e-74 258
MS.gene42687.t1 AT5G44530 28.838 749 447 25 10 701 85 804 1.46e-74 258
MS.gene42687.t1 AT4G20430 28.351 776 476 25 10 728 98 850 2.79e-72 252
MS.gene42687.t1 AT4G20430 28.351 776 476 25 10 728 98 850 2.79e-72 252
MS.gene42687.t1 AT5G44530 27.907 774 447 26 10 701 85 829 5.62e-70 246
MS.gene42687.t1 AT4G20430 28.292 767 464 23 10 728 98 826 2.74e-68 241
MS.gene42687.t1 AT5G44530 28.190 525 317 16 10 486 85 597 3.06e-47 177
MS.gene42687.t1 AT1G32980 39.175 194 102 8 505 693 1 183 1.38e-30 119
MS.gene42687.t1 AT5G59110 32.768 177 101 7 557 726 1 166 6.37e-16 76.6

Find 207 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCCATTACTACAGATTT+AGG 0.137912 3.3:+86313655 MS.gene42687:CDS
AATTGTCTTGGCAGACTTTC+CGG 0.200953 3.3:-86312371 None:intergenic
TGAAAGAGGGGAGAAATTTA+TGG 0.220238 3.3:-86312323 None:intergenic
ATCGTGGTGGTTTGCTCCGC+TGG 0.226787 3.3:+86310266 MS.gene42687:CDS
GTTTGCTCCGCTGGGAATTC+TGG 0.236145 3.3:+86310275 MS.gene42687:CDS
TAATTGATTATTCAGGTATA+TGG 0.239155 3.3:+86309268 MS.gene42687:intron
TAGATCGCCAACCTCGATTC+AGG 0.266337 3.3:-86310068 None:intergenic
TTGGGGCAGTTGAAACTATC+AGG 0.280938 3.3:-86313838 None:intergenic
GTTCCGGTTTCAAGTTTATA+TGG 0.288791 3.3:-86313235 None:intergenic
AACTTCACACAACTCATTCT+TGG 0.315606 3.3:+86308990 MS.gene42687:CDS
GTGCAAGAGGCGGGTGGATT+AGG 0.318806 3.3:+86312640 MS.gene42687:CDS
CTCCGCTGGGAATTCTGGTC+CGG 0.320226 3.3:+86310280 MS.gene42687:CDS
CCACATGTTTCGGGCCTTGC+CGG 0.321741 3.3:+86313271 MS.gene42687:CDS
ATGTCATGCCCACATGTTTC+GGG 0.323036 3.3:+86313262 MS.gene42687:CDS
TGACATGAGTTTGCAACTTA+AGG 0.331494 3.3:-86309018 None:intergenic
TCAACTCATCTAATTGTAAT+AGG 0.331630 3.3:+86309373 MS.gene42687:CDS
ATACAACACAACCACTATTA+AGG 0.332712 3.3:+86313798 MS.gene42687:CDS
TACAAAGTGTGCAGCAATAT+TGG 0.338662 3.3:+86310089 MS.gene42687:CDS
CATGTCATGCCCACATGTTT+CGG 0.339424 3.3:+86313261 MS.gene42687:CDS
CTCCCATTACTACAGATTTA+GGG 0.340219 3.3:+86313656 MS.gene42687:CDS
CCTTTCCAACCGGGTGGAAT+AGG 0.353399 3.3:-86309327 None:intergenic
TTTGATCTTACCACCGTTGC+TGG 0.356687 3.3:-86312718 None:intergenic
ACTTCACACAACTCATTCTT+GGG 0.359617 3.3:+86308991 MS.gene42687:CDS
TTTGTAAATTGTAGTTTCTC+TGG 0.364048 3.3:-86314036 None:intergenic
CGATTATCCCCATCAAGGTT+AGG 0.367675 3.3:-86309921 None:intergenic
ACACCTGGTGCTGCAATATC+AGG 0.368365 3.3:-86313148 None:intergenic
TATGGAAGGATAATTGATAT+TGG 0.375208 3.3:-86313884 None:intergenic
AACTATAAGCATGGATTCTC+AGG 0.378150 3.3:+86308881 MS.gene42687:CDS
CGATGAATGAGAAGAAGAAT+TGG 0.378669 3.3:-86309059 None:intergenic
GTGAGTGGTGCTTCATACTA+TGG 0.380753 3.3:+86310014 MS.gene42687:CDS
CATGCAGGTGCCTTTCCAAC+CGG 0.381461 3.3:-86309337 None:intergenic
TGGGCATGACATGGAAGTTC+CGG 0.395812 3.3:-86313251 None:intergenic
AAAACCGACGTGATTGCAAT+TGG 0.398776 3.3:+86310218 MS.gene42687:CDS
GTTGGTAGAATTGTTGCTAC+TGG 0.400439 3.3:-86312941 None:intergenic
CTTTCAGTCTAACGTTGTCT+TGG 0.401062 3.3:+86310370 MS.gene42687:CDS
TCCGCTGGGAATTCTGGTCC+GGG 0.401093 3.3:+86310281 MS.gene42687:CDS
GACCCTAAATCTGTAGTAAT+GGG 0.406086 3.3:-86313658 None:intergenic
CACACGGCCTCGACAGCGGC+AGG 0.409519 3.3:+86309984 MS.gene42687:CDS
TGAAGTTTCAGAATGGGTTC+TGG 0.414838 3.3:-86308974 None:intergenic
TGATGCACCTTGGATATTAA+CGG 0.415130 3.3:+86310322 MS.gene42687:CDS
TCATCGTCGGACATCGTAAT+CGG 0.417132 3.3:+86309076 MS.gene42687:CDS
GCAGACTTTCCGGTTATCAA+TGG 0.425131 3.3:-86312361 None:intergenic
ACCTCGTTGAATTGAGGTAT+TGG 0.425327 3.3:-86312759 None:intergenic
GCCTCAATTGCTCAACAGCC+TGG 0.432704 3.3:+86308935 MS.gene42687:CDS
TTTACCATTACTCCATGTAA+TGG 0.433669 3.3:-86314133 None:intergenic
TTCAAGTCAGGTTGGGAACT+CGG 0.435683 3.3:-86310197 None:intergenic
ATCGTCAAACGCTGCAAGTA+TGG 0.440581 3.3:-86310126 None:intergenic
CCCCTTACCTCGTTGAATTG+AGG 0.440725 3.3:-86312765 None:intergenic
AGCTACATAGTTAGTACAAA+AGG 0.440862 3.3:-86314171 None:intergenic
TGATCAGGAGTCGATTCCTT+GGG 0.441725 3.3:-86313856 None:intergenic
TCCAATCCATGCTGCAAGAA+TGG 0.445472 3.3:-86313173 None:intergenic
AGTTTCTTTCCCAGTGAAGT+TGG 0.449728 3.3:-86313914 None:intergenic
ACCATTCTTGCAGCATGGAT+TGG 0.449771 3.3:+86313172 MS.gene42687:CDS
CTCGCGGAAGGGACAGCAAA+AGG 0.450765 3.3:+86310038 MS.gene42687:CDS
TGCAGCAATATTGGTTGCTC+TGG 0.451037 3.3:+86310098 MS.gene42687:CDS
AGATTATAAGCCTGCACCTA+TGG 0.451616 3.3:+86312976 MS.gene42687:CDS
GCTGATTATCCATTGATAAC+CGG 0.452248 3.3:+86312352 MS.gene42687:CDS
GTCATCTGTGATGGCATAGA+TGG 0.458184 3.3:+86312586 MS.gene42687:CDS
GTTGCCACACCTTATGACTA+TGG 0.461468 3.3:+86313682 MS.gene42687:CDS
TTTCAGTCTAACGTTGTCTT+GGG 0.463056 3.3:+86310371 MS.gene42687:CDS
TGCTTTCGCTCTCCCTTGGT+AGG 0.463956 3.3:+86310171 MS.gene42687:CDS
AGGTATTACCCTAACCTTGA+TGG 0.465971 3.3:+86309912 MS.gene42687:CDS
ATGATCAGGAGTCGATTCCT+TGG 0.466399 3.3:-86313857 None:intergenic
ATCTGTTTGGATCCATTACA+TGG 0.467647 3.3:+86314121 MS.gene42687:CDS
TATTTGCCACAGCTCCATCT+TGG 0.474624 3.3:-86312681 None:intergenic
CTGAAAGTCACGGTCAATAG+TGG 0.474844 3.3:-86310354 None:intergenic
ACCACTAGGAGCATTAACTA+TGG 0.475885 3.3:-86313995 None:intergenic
TTGAACTACTTGTGTTACAT+AGG 0.480268 3.3:+86313775 MS.gene42687:CDS
TCGTGGTGGTTTGCTCCGCT+GGG 0.481318 3.3:+86310267 MS.gene42687:CDS
TCCAGGCTGTTGAGCAATTG+AGG 0.483511 3.3:-86308936 None:intergenic
TTGCCATATAAACTTGAAAC+CGG 0.483573 3.3:+86313232 MS.gene42687:CDS
ATAGCAATCTCCAACTTCAC+TGG 0.484140 3.3:+86313904 MS.gene42687:CDS
TTGCCGGCAGCATTAAATCT+AGG 0.486423 3.3:+86313287 MS.gene42687:CDS
TGACCCTAAATCTGTAGTAA+TGG 0.488432 3.3:-86313659 None:intergenic
TTGATATTGGAAATATGATC+AGG 0.491289 3.3:-86313871 None:intergenic
TTCTTCTTCTCATTCATCGT+CGG 0.498614 3.3:+86309063 MS.gene42687:CDS
GCTTTCGCTCTCCCTTGGTA+GGG 0.500323 3.3:+86310172 MS.gene42687:CDS
TCCCCTGCTCCATAGTCATA+AGG 0.501901 3.3:-86313691 None:intergenic
ACACCTTATGACTATGGAGC+AGG 0.503669 3.3:+86313688 MS.gene42687:CDS
GGAACCATTTGTTGAATTCG+CGG 0.505155 3.3:-86308705 None:intergenic
TTTGACGATGCAATTTCTGA+TGG 0.507408 3.3:+86310140 MS.gene42687:CDS
GATGTGCTTTCGCTCTCCCT+TGG 0.507779 3.3:+86310167 MS.gene42687:CDS
GTTCCTAGATTTAATGCTGC+CGG 0.511283 3.3:-86313290 None:intergenic
GTTCATATTACTGACCAAGA+TGG 0.512162 3.3:+86312667 MS.gene42687:CDS
GGTATTACCCTAACCTTGAT+GGG 0.512575 3.3:+86309913 MS.gene42687:CDS
TCATACTATGGTCTCGCGGA+AGG 0.518185 3.3:+86310026 MS.gene42687:CDS
CAAGTAGTTCAAGTATTCAA+TGG 0.519299 3.3:-86313764 None:intergenic
CTAGTTTCATAAACGAGCCC+TGG 0.520292 3.3:-86313739 None:intergenic
CTTTCGCTCTCCCTTGGTAG+GGG 0.524795 3.3:+86310173 MS.gene42687:CDS
GATTATCCCCATCAAGGTTA+GGG 0.525027 3.3:-86309920 None:intergenic
CCTATTCCACCCGGTTGGAA+AGG 0.526224 3.3:+86309327 MS.gene42687:CDS
GGATCCATTACATGGAGTAA+TGG 0.527970 3.3:+86314129 MS.gene42687:CDS
GGTTTCAAGTTTATATGGCA+AGG 0.528705 3.3:-86313230 None:intergenic
CGAAACATGTGGGCATGACA+TGG 0.529107 3.3:-86313260 None:intergenic
AACACAAATTAATAATATGA+AGG 0.529254 3.3:+86313633 MS.gene42687:CDS
CCGGCAAGGCCCGAAACATG+TGG 0.532718 3.3:-86313271 None:intergenic
TCGTTGAACAAAGATCTGTT+TGG 0.533430 3.3:+86314108 MS.gene42687:CDS
ATTAGGACGGTGCAAGAGGC+GGG 0.533855 3.3:+86312631 MS.gene42687:CDS
AAGATTGCCACCATAGGTGC+AGG 0.534542 3.3:-86312986 None:intergenic
AGATCAGCCATCATGACATC+CGG 0.534755 3.3:+86313337 MS.gene42687:CDS
TAAGTCAGCAGTAATTGTCT+TGG 0.537075 3.3:-86312383 None:intergenic
CCACAACAAGGGATACAGTT+GGG 0.537136 3.3:+86309952 MS.gene42687:CDS
GTGTTACCATTCTTGCAGCA+TGG 0.539086 3.3:+86313167 MS.gene42687:CDS
ATGCAGGTGCCTTTCCAACC+GGG 0.541086 3.3:-86309336 None:intergenic
CGCCTGACCGGATGTCATGA+TGG 0.541584 3.3:-86313344 None:intergenic
GCGTTCCATGCCGTGGAGCA+CGG 0.542067 3.3:+86310242 MS.gene42687:CDS
GGCATTCCCTGCCGCTGTCG+AGG 0.542077 3.3:-86309991 None:intergenic
TTGATCTTACCACCGTTGCT+GGG 0.543741 3.3:-86312717 None:intergenic
TAGATTTAATGCTGCCGGCA+AGG 0.544871 3.3:-86313285 None:intergenic
TTAGGAAGATAATAGGAGCA+AGG 0.545406 3.3:+86309892 MS.gene42687:intron
AAGTAGTAGAGAAAATAGCT+TGG 0.546354 3.3:-86314080 None:intergenic
AGATCGCCAACCTCGATTCA+GGG 0.546645 3.3:-86310067 None:intergenic
CTGCCGCTGTCGAGGCCGTG+TGG 0.547521 3.3:-86309983 None:intergenic
AGTAGAACTGTTACAAATGT+TGG 0.548156 3.3:+86313946 MS.gene42687:CDS
GGAAACACAGACACAACTCC+AGG 0.550523 3.3:-86308953 None:intergenic
GTTGTGTGAAGTTTCAGAAT+GGG 0.554736 3.3:-86308980 None:intergenic
TAGCCTGATATTGCAGCACC+AGG 0.555710 3.3:+86313145 MS.gene42687:intron
TGCCGCTGTCGAGGCCGTGT+GGG 0.555973 3.3:-86309982 None:intergenic
TGATGACGAAAATGTTCCAA+AGG 0.556805 3.3:+86313198 MS.gene42687:CDS
TCGTTGAATTGAGGTATTGG+AGG 0.558308 3.3:-86312756 None:intergenic
AGTTGTGTGAAGTTTCAGAA+TGG 0.559404 3.3:-86308981 None:intergenic
GTTTCAAGTTTATATGGCAA+GGG 0.559488 3.3:-86313229 None:intergenic
AGTGAAGTTGGAGATTGCTA+TGG 0.561987 3.3:-86313902 None:intergenic
GATGACGAAAATGTTCCAAA+GGG 0.563134 3.3:+86313199 MS.gene42687:CDS
TTTCATAAACGAGCCCTGGT+TGG 0.563414 3.3:-86313735 None:intergenic
TAACACAGTGTTTAAAACAT+GGG 0.564307 3.3:-86308744 None:intergenic
CGATGCCGTGCTCCACGGCA+TGG 0.564840 3.3:-86310247 None:intergenic
CTTGAAAAGATTGCCACCAT+AGG 0.565332 3.3:-86312992 None:intergenic
GGAGCCGCGAATTCAACAAA+TGG 0.569622 3.3:+86308701 MS.gene42687:CDS
GGAAATATTGTCATCTGTGA+TGG 0.573882 3.3:+86312577 MS.gene42687:CDS
AGCATTAACTATGGCGGAGT+AGG 0.574177 3.3:-86313986 None:intergenic
TTAACACAGTGTTTAAAACA+TGG 0.576622 3.3:-86308745 None:intergenic
GCCACAACAAGGGATACAGT+TGG 0.577283 3.3:+86309951 MS.gene42687:CDS
ATATTCTTTGAAAGAGCTGA+AGG 0.579356 3.3:-86313022 None:intergenic
TTAAATCTAGGAACCCCACT+TGG 0.579525 3.3:+86313299 MS.gene42687:CDS
CACCACGATGCCGTGCTCCA+CGG 0.579719 3.3:-86310252 None:intergenic
ATCGTGTGGCGGCCACAACA+AGG 0.582426 3.3:+86309940 MS.gene42687:CDS
AATTAGGACGGTGCAAGAGG+CGG 0.582731 3.3:+86312630 MS.gene42687:CDS
TGGATCCTATTCCACCCGGT+TGG 0.582819 3.3:+86309322 MS.gene42687:CDS
CTAGTACATAACTATAAGCA+TGG 0.586808 3.3:+86308872 MS.gene42687:CDS
ATGGGCATGATCTTTGCGAA+TGG 0.589365 3.3:-86308726 None:intergenic
AATTGGAGCGTTCCATGCCG+TGG 0.592861 3.3:+86310235 MS.gene42687:CDS
GCGGCAGGGAATGCCGTGAG+TGG 0.594784 3.3:+86309999 MS.gene42687:CDS
CATACTATGGTCTCGCGGAA+GGG 0.596810 3.3:+86310027 MS.gene42687:CDS
AACCCACACGGCCTCGACAG+CGG 0.598995 3.3:+86309980 MS.gene42687:CDS
GGGTAATAACAAAGTTGTCA+AGG 0.600151 3.3:+86310391 MS.gene42687:CDS
TAGCAATCTCCAACTTCACT+GGG 0.602726 3.3:+86313905 MS.gene42687:CDS
GAAGTCATTTGATGTCATGC+AGG 0.602910 3.3:-86309352 None:intergenic
TCTTTCAAAGAATATTCTCA+AGG 0.604351 3.3:+86313030 MS.gene42687:CDS
TTATAAGCCTGCACCTATGG+TGG 0.604912 3.3:+86312979 MS.gene42687:CDS
CACCTTATGACTATGGAGCA+GGG 0.605536 3.3:+86313689 MS.gene42687:CDS
GCAGCAACCGTTAATATCCA+AGG 0.610555 3.3:-86310329 None:intergenic
TGTTACAAATGTTGGTGAAG+AGG 0.613181 3.3:+86313954 MS.gene42687:CDS
TTATGCAGACTTCCCAGCAA+CGG 0.614279 3.3:+86312705 MS.gene42687:CDS
GATCGCCAACCTCGATTCAG+GGG 0.617981 3.3:-86310066 None:intergenic
ATTGCAGAGGCACTCCAAGT+GGG 0.618328 3.3:-86313313 None:intergenic
TGCCGTGGAGCACGGCATCG+TGG 0.619635 3.3:+86310250 MS.gene42687:CDS
AAGTTGGAGATTGCTATGGA+AGG 0.622266 3.3:-86313898 None:intergenic
CCGCTGGGAATTCTGGTCCG+GGG 0.623489 3.3:+86310282 MS.gene42687:CDS
CCCAACTGTATCCCTTGTTG+TGG 0.623622 3.3:-86309952 None:intergenic
ATAGTATGAAGCACCACTCA+CGG 0.626580 3.3:-86310012 None:intergenic
ACAAGGGATACAGTTGGGCA+TGG 0.631353 3.3:+86309957 MS.gene42687:CDS
TACTGACCAAGATGGAGCTG+TGG 0.631537 3.3:+86312675 MS.gene42687:CDS
TGGGGCAGTTGAAACTATCA+GGG 0.632412 3.3:-86313837 None:intergenic
GGGAACTCGGACCCCTACCA+AGG 0.632921 3.3:-86310184 None:intergenic
CGGCAAGGCCCGAAACATGT+GGG 0.634895 3.3:-86313270 None:intergenic
TGGTTCCCCTGAATCGAGGT+TGG 0.635912 3.3:+86310061 MS.gene42687:CDS
CTGCTGACTTAACTGAAGCA+AGG 0.636342 3.3:+86312395 MS.gene42687:CDS
CCACACGATTATCCCCATCA+AGG 0.637016 3.3:-86309926 None:intergenic
TGCTTCATACTATGGTCTCG+CGG 0.638281 3.3:+86310022 MS.gene42687:CDS
ACCTTATGACTATGGAGCAG+GGG 0.639920 3.3:+86313690 MS.gene42687:CDS
TCGTGTGGCGGCCACAACAA+GGG 0.640936 3.3:+86309941 MS.gene42687:CDS
TAATCTATGACTGTGACTGT+TGG 0.642056 3.3:-86312959 None:intergenic
CAATTGAATCATTCCAACCA+GGG 0.642898 3.3:+86313722 MS.gene42687:CDS
AGCTGAACTTTCACACCACT+AGG 0.643066 3.3:-86314009 None:intergenic
ACAATTGAATCATTCCAACC+AGG 0.643744 3.3:+86313721 MS.gene42687:CDS
GTAATCGGCATGTTAGACTC+AGG 0.649016 3.3:+86309091 MS.gene42687:CDS
ACACGGCCTCGACAGCGGCA+GGG 0.649067 3.3:+86309985 MS.gene42687:CDS
TGATAGTTTCAACTGCCCCA+AGG 0.650005 3.3:+86313840 MS.gene42687:CDS
GATTGCAGAGGCACTCCAAG+TGG 0.650879 3.3:-86313314 None:intergenic
TGCTCCATAGTCATAAGGTG+TGG 0.652021 3.3:-86313686 None:intergenic
TTAACAACAGTACTTAGCCC+CGG 0.654001 3.3:-86310299 None:intergenic
AAAGTCACGGTCAATAGTGG+TGG 0.655405 3.3:-86310351 None:intergenic
GGAATGGATCCTATTCCACC+CGG 0.655530 3.3:+86309318 MS.gene42687:CDS
AGGACGGTGCAAGAGGCGGG+TGG 0.656162 3.3:+86312634 MS.gene42687:CDS
CGTGGAGCACGGCATCGTGG+TGG 0.657048 3.3:+86310253 MS.gene42687:CDS
CCTTGATGGGGATAATCGTG+TGG 0.657500 3.3:+86309926 MS.gene42687:CDS
GGAACTCGGACCCCTACCAA+GGG 0.660156 3.3:-86310183 None:intergenic
AAGGTGGTTCCCCTGAATCG+AGG 0.666126 3.3:+86310057 MS.gene42687:CDS
CGCTCCAATTGCAATCACGT+CGG 0.668499 3.3:-86310222 None:intergenic
TTGCAGAGGCACTCCAAGTG+GGG 0.669772 3.3:-86313312 None:intergenic
TGATGGGGATAATCGTGTGG+CGG 0.672934 3.3:+86309929 MS.gene42687:CDS
GTATTACCCTAACCTTGATG+GGG 0.673229 3.3:+86309914 MS.gene42687:CDS
GATCAGGAGTCGATTCCTTG+GGG 0.673632 3.3:-86313855 None:intergenic
GCCATAGTTAATGCTCCTAG+TGG 0.674678 3.3:+86313994 MS.gene42687:CDS
GCGGAAGGGACAGCAAAAGG+TGG 0.675081 3.3:+86310041 MS.gene42687:CDS
TGCAGACTTCCCAGCAACGG+TGG 0.677664 3.3:+86312708 MS.gene42687:CDS
CAGGTGCCTTTCCAACCGGG+TGG 0.687182 3.3:-86309333 None:intergenic
CTGTTGTTAATGATGCACCT+TGG 0.690246 3.3:+86310312 MS.gene42687:CDS
AGTTGGGCATGGAACCCACA+CGG 0.692569 3.3:+86309968 MS.gene42687:CDS
ACTAGGAGCATTAACTATGG+CGG 0.698978 3.3:-86313992 None:intergenic
CAACGTTAGACTGAAAGTCA+CGG 0.699540 3.3:-86310364 None:intergenic
AAACAGATCTTTGTTCAACG+AGG 0.714676 3.3:-86314106 None:intergenic
GATGGCTGATCTGATTGCAG+AGG 0.717181 3.3:-86313326 None:intergenic
GCTGCAAGAATGGTAACACC+TGG 0.728605 3.3:-86313163 None:intergenic
CCCCGGACCAGAATTCCCAG+CGG 0.730989 3.3:-86310282 None:intergenic
TCCAATACCTCAATTCAACG+AGG 0.750504 3.3:+86312758 MS.gene42687:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATAAAATAAAATTA+TGG - chr3.3:86309867-86309886 None:intergenic 0.0%
!!! TTTTAAAATATATATATAAA+TGG - chr3.3:86310446-86310465 None:intergenic 0.0%
!! TTAATGTATAAATATTTCTT+AGG + chr3.3:86311921-86311940 MS.gene42687:intron 10.0%
!!! AATTCATTTTTTTTTTCAAA+TGG + chr3.3:86310558-86310577 MS.gene42687:intron 10.0%
!!! ATTTTAATAATTGATTATTC+AGG + chr3.3:86309261-86309280 MS.gene42687:intron 10.0%
!!! TTTTTGATTAAATAAAATGT+TGG + chr3.3:86312241-86312260 MS.gene42687:intron 10.0%
!! AACACAAATTAATAATATGA+AGG + chr3.3:86313633-86313652 MS.gene42687:CDS 15.0%
!! AGTAGAAATTAGAAATAAAA+TGG - chr3.3:86310768-86310787 None:intergenic 15.0%
!! CATTAATAAAATCTCATAAA+TGG - chr3.3:86311907-86311926 None:intergenic 15.0%
!! TATTATATTCTTCATGTATT+CGG + chr3.3:86309669-86309688 MS.gene42687:intron 15.0%
!! TTCAAATAAATTAAAAGAGT+AGG - chr3.3:86311406-86311425 None:intergenic 15.0%
!!! AATCAATTTAGAACTAATTT+TGG - chr3.3:86313430-86313449 None:intergenic 15.0%
!!! ATCAATTTAGAACTAATTTT+GGG - chr3.3:86313429-86313448 None:intergenic 15.0%
!!! ATGAAACAATAGTTTTTTTT+TGG - chr3.3:86310744-86310763 None:intergenic 15.0%
!!! ATTAATTAGTTTTACAAGTT+TGG + chr3.3:86311788-86311807 MS.gene42687:intron 15.0%
!!! GATAAGTTTGATTATATTTT+TGG - chr3.3:86309804-86309823 None:intergenic 15.0%
!!! TTAATTAGTTTTACAAGTTT+GGG + chr3.3:86311789-86311808 MS.gene42687:intron 15.0%
!!! TTTAATTCTAAAATCAACAA+TGG + chr3.3:86312866-86312885 MS.gene42687:intron 15.0%
!! AATATGACAGTTAAATACAT+GGG + chr3.3:86310588-86310607 MS.gene42687:intron 20.0%
!! ATATAATTAAACTCGTGAAA+TGG - chr3.3:86309216-86309235 None:intergenic 20.0%
!! GTTGGATATATTAATTACTA+CGG + chr3.3:86311048-86311067 MS.gene42687:intron 20.0%
!! TAATATGACAGTTAAATACA+TGG + chr3.3:86310587-86310606 MS.gene42687:intron 20.0%
!! TAATTGATTATTCAGGTATA+TGG + chr3.3:86309268-86309287 MS.gene42687:intron 20.0%
!! TGATTGAGCTTAATAAATTA+AGG + chr3.3:86309504-86309523 MS.gene42687:intron 20.0%
!! TTAAAATTTATCGTCTACAT+TGG + chr3.3:86313457-86313476 MS.gene42687:intron 20.0%
!! TTAGATAAGAAAAAAGTTGA+AGG + chr3.3:86312556-86312575 MS.gene42687:CDS 20.0%
!! TTCTGAACAATTAAAACTTT+CGG - chr3.3:86309745-86309764 None:intergenic 20.0%
!! TTTCACGAGTTTAATTATAT+TGG + chr3.3:86309216-86309235 MS.gene42687:intron 20.0%
!!! AAGAATATAATAGCTTTGTT+AGG - chr3.3:86309661-86309680 None:intergenic 20.0%
!!! AGTTTCATTTGTTTTCTTTT+AGG - chr3.3:86309771-86309790 None:intergenic 20.0%
!!! ATGGTGATTTTTTTTTTCTA+TGG + chr3.3:86311991-86312010 MS.gene42687:intron 20.0%
!!! TCTTTCTATAAAGCATTATA+AGG - chr3.3:86310807-86310826 None:intergenic 20.0%
!!! TTCAATTTTAGGAAGATAAT+AGG + chr3.3:86309885-86309904 MS.gene42687:intron 20.0%
!!! TTTTCTTCTTTTTTTTCTTG+AGG + chr3.3:86311024-86311043 MS.gene42687:intron 20.0%
!!! TTTTGAAATAACCTTAATAG+TGG - chr3.3:86313812-86313831 None:intergenic 20.0%
!!! TTTTGTATACTATATGTAGA+TGG + chr3.3:86311972-86311991 MS.gene42687:intron 20.0%
!!! TTTTTCTTATCTAATGAACT+TGG - chr3.3:86312550-86312569 None:intergenic 20.0%
!!! TTTTTTGGTATAGATATAGA+AGG + chr3.3:86309122-86309141 MS.gene42687:intron 20.0%
! AATCAATCATGAATTTAGTG+TGG + chr3.3:86313385-86313404 MS.gene42687:intron 25.0%
! AATTACTACGGTTTAACATT+TGG + chr3.3:86311060-86311079 MS.gene42687:intron 25.0%
! ACAAATTAAAGATGTGTGAT+TGG - chr3.3:86312807-86312826 None:intergenic 25.0%
! ACATGGGTAAAAAATAATGT+TGG + chr3.3:86310604-86310623 MS.gene42687:intron 25.0%
! ACTACAAAACTATATGTAGA+TGG + chr3.3:86312058-86312077 MS.gene42687:intron 25.0%
! AGTGATTAAAAAATGCAAGA+GGG - chr3.3:86309530-86309549 None:intergenic 25.0%
! ATATAACGATATAGCTAGAT+AGG + chr3.3:86313064-86313083 MS.gene42687:intron 25.0%
! ATTCAACCGATGAAAAAATT+AGG + chr3.3:86312614-86312633 MS.gene42687:CDS 25.0%
! ATTGATCATGTGAATTGTTT+AGG + chr3.3:86308837-86308856 MS.gene42687:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + chr3.3:86311259-86311278 MS.gene42687:intron 25.0%
! GGAAGAAAAAAAAAAAGCAA+GGG - chr3.3:86310994-86311013 None:intergenic 25.0%
! TAAGTTCAATCATTTGGTTA+TGG + chr3.3:86311655-86311674 MS.gene42687:intron 25.0%
! TAGTGATTAAAAAATGCAAG+AGG - chr3.3:86309531-86309550 None:intergenic 25.0%
! TATAACGATATAGCTAGATA+GGG + chr3.3:86313065-86313084 MS.gene42687:intron 25.0%
! TATGGAAGGATAATTGATAT+TGG - chr3.3:86313887-86313906 None:intergenic 25.0%
! TCAACTCATCTAATTGTAAT+AGG + chr3.3:86309373-86309392 MS.gene42687:CDS 25.0%
! TCTTTCAAAGAATATTCTCA+AGG + chr3.3:86313030-86313049 MS.gene42687:CDS 25.0%
! TGGAAGAAAAAAAAAAAGCA+AGG - chr3.3:86310995-86311014 None:intergenic 25.0%
! TTGATATTGGAAATATGATC+AGG - chr3.3:86313874-86313893 None:intergenic 25.0%
! TTGTAATAGGTAGATAGAAA+AGG + chr3.3:86309386-86309405 MS.gene42687:intron 25.0%
! TTTGTAAATTGTAGTTTCTC+TGG - chr3.3:86314039-86314058 None:intergenic 25.0%
!! ATAAAGCATTATAAGGTGAA+TGG - chr3.3:86310800-86310819 None:intergenic 25.0%
!! ATTTTCATCAAAATCGAACT+CGG + chr3.3:86311589-86311608 MS.gene42687:intron 25.0%
!! TAAAGCATTATAAGGTGAAT+GGG - chr3.3:86310799-86310818 None:intergenic 25.0%
!! TAACACAGTGTTTAAAACAT+GGG - chr3.3:86308747-86308766 None:intergenic 25.0%
!! TATAAAAAATCTAGAACGCA+TGG + chr3.3:86309562-86309581 MS.gene42687:intron 25.0%
!! TTAACACAGTGTTTAAAACA+TGG - chr3.3:86308748-86308767 None:intergenic 25.0%
!! TTTTAAACACTGTGTTAAGA+AGG + chr3.3:86308750-86308769 MS.gene42687:CDS 25.0%
!!! AATTCTAAAATCAACAATGG+TGG + chr3.3:86312869-86312888 MS.gene42687:intron 25.0%
!!! AGATGGTGATTTTTTTTCTA+TGG + chr3.3:86312075-86312094 MS.gene42687:intron 25.0%
!!! ATAGCTTTGTTAGGTTTAAT+CGG - chr3.3:86309652-86309671 None:intergenic 25.0%
!!! TTTTTTTCGTGTTTTCAACA+AGG + chr3.3:86311837-86311856 MS.gene42687:intron 25.0%
!!! TTTTTTTTTCTTCCAAGTGT+TGG + chr3.3:86311000-86311019 MS.gene42687:intron 25.0%
AAAGAAGAAAATCCAACACT+TGG - chr3.3:86311015-86311034 None:intergenic 30.0%
AAATGCTTTCGCCAAAAATA+TGG - chr3.3:86310670-86310689 None:intergenic 30.0%
AACCGATGAAAAAATTAGGA+CGG + chr3.3:86312618-86312637 MS.gene42687:CDS 30.0%
AAGTAGTAGAGAAAATAGCT+TGG - chr3.3:86314083-86314102 None:intergenic 30.0%
AATGGATAGAGTAATAGCTT+TGG - chr3.3:86309198-86309217 None:intergenic 30.0%
ACCAGACAAAAAGAAAGAAA+AGG + chr3.3:86310952-86310971 MS.gene42687:intron 30.0%
AGTAGAACTGTTACAAATGT+TGG + chr3.3:86313946-86313965 MS.gene42687:CDS 30.0%
ATACAACACAACCACTATTA+AGG + chr3.3:86313798-86313817 MS.gene42687:CDS 30.0%
CAAGTAGTTCAAGTATTCAA+TGG - chr3.3:86313767-86313786 None:intergenic 30.0%
CCAGACAAAAAGAAAGAAAA+GGG + chr3.3:86310953-86310972 MS.gene42687:intron 30.0%
CTAAAAAATTGTATTGGAGG+AGG + chr3.3:86311262-86311281 MS.gene42687:intron 30.0%
CTAGTACATAACTATAAGCA+TGG + chr3.3:86308872-86308891 MS.gene42687:CDS 30.0%
CTCATAAATGCTGTACTTTA+GGG + chr3.3:86312295-86312314 MS.gene42687:intron 30.0%
GGCTACAAAGAACAAATTAT+TGG - chr3.3:86313130-86313149 None:intergenic 30.0%
GGGGAACTAAAAAATTGTAT+TGG + chr3.3:86311256-86311275 MS.gene42687:intron 30.0%
GTCACTTAAGTTCAATCATT+TGG + chr3.3:86311649-86311668 MS.gene42687:intron 30.0%
GTGGAAAATATGACGAAAAA+TGG - chr3.3:86311437-86311456 None:intergenic 30.0%
TATTCTTCATGTATTCGGTT+TGG + chr3.3:86309674-86309693 MS.gene42687:intron 30.0%
TGGATGAAATAGAGGAAAAT+GGG + chr3.3:86311177-86311196 MS.gene42687:intron 30.0%
TTGAACTACTTGTGTTACAT+AGG + chr3.3:86313775-86313794 MS.gene42687:CDS 30.0%
TTGCCATATAAACTTGAAAC+CGG + chr3.3:86313232-86313251 MS.gene42687:CDS 30.0%
TTTAAAAATAAACGCCTGAC+CGG - chr3.3:86313359-86313378 None:intergenic 30.0%
TTTACCATTACTCCATGTAA+TGG - chr3.3:86314136-86314155 None:intergenic 30.0%
! ACGCATTCATTAGACTTTTT+AGG + chr3.3:86311873-86311892 MS.gene42687:intron 30.0%
! ATATTCTTTGAAAGAGCTGA+AGG - chr3.3:86313025-86313044 None:intergenic 30.0%
! CTATGTTTACCTTTGTTTCT+GGG + chr3.3:86309823-86309842 MS.gene42687:intron 30.0%
! CTTTTTGTCTGGTAGATTAA+TGG - chr3.3:86310945-86310964 None:intergenic 30.0%
! TCCTTTTGTACTAACTATGT+AGG + chr3.3:86314170-86314189 MS.gene42687:CDS 30.0%
! TCTATGTTTACCTTTGTTTC+TGG + chr3.3:86309822-86309841 MS.gene42687:intron 30.0%
!! AATCAGCAGATTTTGAAAGA+GGG - chr3.3:86312339-86312358 None:intergenic 30.0%
!! GTTTCAAGTTTATATGGCAA+GGG - chr3.3:86313232-86313251 None:intergenic 30.0%
!! TAATCAGCAGATTTTGAAAG+AGG - chr3.3:86312340-86312359 None:intergenic 30.0%
!! TAGCTTTGTTAGGTTTAATC+GGG - chr3.3:86309651-86309670 None:intergenic 30.0%
!! TATGTTTACCTTTGTTTCTG+GGG + chr3.3:86309824-86309843 MS.gene42687:intron 30.0%
!! TTAAGTGTTGGATCTTTGTT+TGG - chr3.3:86309483-86309502 None:intergenic 30.0%
!!! AACCACGTTGTTTTAAAGTT+AGG + chr3.3:86312487-86312506 MS.gene42687:intron 30.0%
!!! ACTTTAAAACAACGTGGTTT+TGG - chr3.3:86312486-86312505 None:intergenic 30.0%
!!! CTTTAAAACAACGTGGTTTT+GGG - chr3.3:86312485-86312504 None:intergenic 30.0%
!!! CTTTTTTTTTCCTTTTCTGC+GGG - chr3.3:86309419-86309438 None:intergenic 30.0%
!!! GCTTTTTTTTTCCTTTTCTG+CGG - chr3.3:86309420-86309439 None:intergenic 30.0%
!!! GTCTACATTGGTCTTTTTAT+AGG + chr3.3:86313469-86313488 MS.gene42687:intron 30.0%
!!! TCTTTTTTTTCTTGAGGAGT+TGG + chr3.3:86311030-86311049 MS.gene42687:intron 30.0%
!!! TTTTTTAGTTCCCCTAAATG+AGG - chr3.3:86311250-86311269 None:intergenic 30.0%
!!! TTTTTTTTTCCTTTTCTGCG+GGG - chr3.3:86309418-86309437 None:intergenic 30.0%
AAAATATGGTGAATGGGGAT+TGG - chr3.3:86310656-86310675 None:intergenic 35.0%
AAACAGATCTTTGTTCAACG+AGG - chr3.3:86314109-86314128 None:intergenic 35.0%
AAACCAGAGGTTTAACACTA+AGG - chr3.3:86311506-86311525 None:intergenic 35.0%
AAATATGGTGAATGGGGATT+GGG - chr3.3:86310655-86310674 None:intergenic 35.0%
AACATCACATCATATACCAG+GGG + chr3.3:86310865-86310884 MS.gene42687:intron 35.0%
AACTATAAGCATGGATTCTC+AGG + chr3.3:86308881-86308900 MS.gene42687:CDS 35.0%
AACTTCACACAACTCATTCT+TGG + chr3.3:86308990-86309009 MS.gene42687:CDS 35.0%
AAGCTCAATCAGTTAAGTGT+TGG - chr3.3:86309495-86309514 None:intergenic 35.0%
ACAATTGAATCATTCCAACC+AGG + chr3.3:86313721-86313740 MS.gene42687:CDS 35.0%
ACTTCACACAACTCATTCTT+GGG + chr3.3:86308991-86309010 MS.gene42687:CDS 35.0%
AGGTAAGGGGAAATTTACAT+TGG + chr3.3:86312778-86312797 MS.gene42687:intron 35.0%
AGTTGCTAGACAAATTGTAG+TGG - chr3.3:86313584-86313603 None:intergenic 35.0%
AGTTGTGTGAAGTTTCAGAA+TGG - chr3.3:86308984-86309003 None:intergenic 35.0%
ATACTAAACCCTCCTCATTT+AGG + chr3.3:86311235-86311254 MS.gene42687:intron 35.0%
ATCTGTTTGGATCCATTACA+TGG + chr3.3:86314121-86314140 MS.gene42687:CDS 35.0%
ATGAAACTAAACCAGTACGT+AGG - chr3.3:86313495-86313514 None:intergenic 35.0%
ATGAAATAGAGGAAAATGGG+AGG + chr3.3:86311180-86311199 MS.gene42687:intron 35.0%
CAATTGAATCATTCCAACCA+GGG + chr3.3:86313722-86313741 MS.gene42687:CDS 35.0%
CATAGTTCCATTAATCTCGT+TGG + chr3.3:86310717-86310736 MS.gene42687:intron 35.0%
CGATGAATGAGAAGAAGAAT+TGG - chr3.3:86309062-86309081 None:intergenic 35.0%
CTCCCATTACTACAGATTTA+GGG + chr3.3:86313656-86313675 MS.gene42687:CDS 35.0%
GAAAAAAAGGAATGAGCAAG+TGG + chr3.3:86311157-86311176 MS.gene42687:intron 35.0%
GAACATCACATCATATACCA+GGG + chr3.3:86310864-86310883 MS.gene42687:intron 35.0%
GACCCTAAATCTGTAGTAAT+GGG - chr3.3:86313661-86313680 None:intergenic 35.0%
GATGACGAAAATGTTCCAAA+GGG + chr3.3:86313199-86313218 MS.gene42687:CDS 35.0%
GCTCATAAATGCTGTACTTT+AGG + chr3.3:86312294-86312313 MS.gene42687:intron 35.0%
GGAAATATTGTCATCTGTGA+TGG + chr3.3:86312577-86312596 MS.gene42687:CDS 35.0%
GGGTAATAACAAAGTTGTCA+AGG + chr3.3:86310391-86310410 MS.gene42687:CDS 35.0%
GGTTATGGTGTGTCTATTTA+AGG + chr3.3:86311670-86311689 MS.gene42687:intron 35.0%
GTGGATGAAATAGAGGAAAA+TGG + chr3.3:86311176-86311195 MS.gene42687:intron 35.0%
GTTCATATTACTGACCAAGA+TGG + chr3.3:86312667-86312686 MS.gene42687:CDS 35.0%
GTTGTGTGAAGTTTCAGAAT+GGG - chr3.3:86308983-86309002 None:intergenic 35.0%
TAAGTCAGCAGTAATTGTCT+TGG - chr3.3:86312386-86312405 None:intergenic 35.0%
TAATCTATGACTGTGACTGT+TGG - chr3.3:86312962-86312981 None:intergenic 35.0%
TACAAAGTGTGCAGCAATAT+TGG + chr3.3:86310089-86310108 MS.gene42687:CDS 35.0%
TACTAAACCCTCCTCATTTA+GGG + chr3.3:86311236-86311255 MS.gene42687:intron 35.0%
TCGCCAAAAATATGGTGAAT+GGG - chr3.3:86310662-86310681 None:intergenic 35.0%
TCGTTGAACAAAGATCTGTT+TGG + chr3.3:86314108-86314127 MS.gene42687:CDS 35.0%
TGAAAGAGGGGAGAAATTTA+TGG - chr3.3:86312326-86312345 None:intergenic 35.0%
TGAAATAGAGGAAAATGGGA+GGG + chr3.3:86311181-86311200 MS.gene42687:intron 35.0%
TGAACATCACATCATATACC+AGG + chr3.3:86310863-86310882 MS.gene42687:intron 35.0%
TGACATGAGTTTGCAACTTA+AGG - chr3.3:86309021-86309040 None:intergenic 35.0%
TGACCCTAAATCTGTAGTAA+TGG - chr3.3:86313662-86313681 None:intergenic 35.0%
TGATGCACCTTGGATATTAA+CGG + chr3.3:86310322-86310341 MS.gene42687:CDS 35.0%
TTAGGAAGATAATAGGAGCA+AGG + chr3.3:86309892-86309911 MS.gene42687:intron 35.0%
TTATGGCAATGCTACTCTAA+TGG - chr3.3:86309850-86309869 None:intergenic 35.0%
TTCGCCAAAAATATGGTGAA+TGG - chr3.3:86310663-86310682 None:intergenic 35.0%
TTCTTCTTCTCATTCATCGT+CGG + chr3.3:86309063-86309082 MS.gene42687:CDS 35.0%
TTTCAGTCTAACGTTGTCTT+GGG + chr3.3:86310371-86310390 MS.gene42687:CDS 35.0%
TTTGACGATGCAATTTCTGA+TGG + chr3.3:86310140-86310159 MS.gene42687:CDS 35.0%
! ATCCCCATTCACCATATTTT+TGG + chr3.3:86310656-86310675 MS.gene42687:intron 35.0%
! ATTGTATTGGAGGAGGATTT+TGG + chr3.3:86311269-86311288 MS.gene42687:intron 35.0%
! CCCTTTTCTTTCTTTTTGTC+TGG - chr3.3:86310956-86310975 None:intergenic 35.0%
! GCTGATTATCCATTGATAAC+CGG + chr3.3:86312352-86312371 MS.gene42687:CDS 35.0%
! TGATGACGAAAATGTTCCAA+AGG + chr3.3:86313198-86313217 MS.gene42687:CDS 35.0%
! TGTTACAAATGTTGGTGAAG+AGG + chr3.3:86313954-86313973 MS.gene42687:CDS 35.0%
! TTGTATTGGAGGAGGATTTT+GGG + chr3.3:86311270-86311289 MS.gene42687:intron 35.0%
! TTTTGGACCAACGAGATTAA+TGG - chr3.3:86310727-86310746 None:intergenic 35.0%
!! AAGTTTTTCGGACAATGGAA+TGG + chr3.3:86309302-86309321 MS.gene42687:CDS 35.0%
!! ATCAGCAGATTTTGAAAGAG+GGG - chr3.3:86312338-86312357 None:intergenic 35.0%
!! CGTACTGGTTTAGTTTCATA+AGG + chr3.3:86313496-86313515 MS.gene42687:intron 35.0%
!! GGTTTCAAGTTTATATGGCA+AGG - chr3.3:86313233-86313252 None:intergenic 35.0%
!! GTTCCGGTTTCAAGTTTATA+TGG - chr3.3:86313238-86313257 None:intergenic 35.0%
!! TGCCTAACTTTAAAACAACG+TGG - chr3.3:86312492-86312511 None:intergenic 35.0%
!!! AACCTCTGGTTTTCAAAAGA+AGG + chr3.3:86311514-86311533 MS.gene42687:intron 35.0%
!!! ACCTCTGGTTTTCAAAAGAA+GGG + chr3.3:86311515-86311534 MS.gene42687:intron 35.0%
!!! ACTCAGGTTGGTTGTTTTTT+TGG + chr3.3:86309107-86309126 MS.gene42687:intron 35.0%
!!! CACCGTCCTAATTTTTTCAT+CGG - chr3.3:86312623-86312642 None:intergenic 35.0%
!!! TTTTTTTTCCTTTTCTGCGG+GGG - chr3.3:86309417-86309436 None:intergenic 35.0%
AAAAATTAGGACGGTGCAAG+AGG + chr3.3:86312627-86312646 MS.gene42687:CDS 40.0%
AAAACCGACGTGATTGCAAT+TGG + chr3.3:86310218-86310237 MS.gene42687:CDS 40.0%
AAAGAAGGGTCAAGGTAATC+CGG + chr3.3:86311529-86311548 MS.gene42687:intron 40.0%
AAGCCTTAGTGTTAAACCTC+TGG + chr3.3:86311500-86311519 MS.gene42687:intron 40.0%
AAGTTGGAGATTGCTATGGA+AGG - chr3.3:86313901-86313920 None:intergenic 40.0%
AATTGTCTTGGCAGACTTTC+CGG - chr3.3:86312374-86312393 None:intergenic 40.0%
ACCTCAATTCAACGAGGTAA+GGG + chr3.3:86312764-86312783 MS.gene42687:intron 40.0%
ACCTCGTTGAATTGAGGTAT+TGG - chr3.3:86312762-86312781 None:intergenic 40.0%
ACTAAACCCTCCTCATTTAG+GGG + chr3.3:86311237-86311256 MS.gene42687:intron 40.0%
AGGGGAAGAGAAAACTTCTA+GGG - chr3.3:86311460-86311479 None:intergenic 40.0%
AGGTATTACCCTAACCTTGA+TGG + chr3.3:86309912-86309931 MS.gene42687:CDS 40.0%
AGTGAAGTTGGAGATTGCTA+TGG - chr3.3:86313905-86313924 None:intergenic 40.0%
AGTTTCTTTCCCAGTGAAGT+TGG - chr3.3:86313917-86313936 None:intergenic 40.0%
ATAGCAATCTCCAACTTCAC+TGG + chr3.3:86313904-86313923 MS.gene42687:CDS 40.0%
CAACGTTAGACTGAAAGTCA+CGG - chr3.3:86310367-86310386 None:intergenic 40.0%
CGCCAAAAATATGGTGAATG+GGG - chr3.3:86310661-86310680 None:intergenic 40.0%
CTGTTGTTAATGATGCACCT+TGG + chr3.3:86310312-86310331 MS.gene42687:CDS 40.0%
CTTACTTACCAGCTAACATC+CGG - chr3.3:86311551-86311570 None:intergenic 40.0%
CTTTCAGTCTAACGTTGTCT+TGG + chr3.3:86310370-86310389 MS.gene42687:CDS 40.0%
GAAATAGAGGAAAATGGGAG+GGG + chr3.3:86311182-86311201 MS.gene42687:intron 40.0%
GAAGTCATTTGATGTCATGC+AGG - chr3.3:86309355-86309374 None:intergenic 40.0%
GATTATCCCCATCAAGGTTA+GGG - chr3.3:86309923-86309942 None:intergenic 40.0%
GCTCCCATTACTACAGATTT+AGG + chr3.3:86313655-86313674 MS.gene42687:CDS 40.0%
GGATCCATTACATGGAGTAA+TGG + chr3.3:86314129-86314148 MS.gene42687:CDS 40.0%
GGTATTACCCTAACCTTGAT+GGG + chr3.3:86309913-86309932 MS.gene42687:CDS 40.0%
GTATTACCCTAACCTTGATG+GGG + chr3.3:86309914-86309933 MS.gene42687:CDS 40.0%
GTGATTTAAACTCTAACCCC+TGG - chr3.3:86310884-86310903 None:intergenic 40.0%
GTTCCTAGATTTAATGCTGC+CGG - chr3.3:86313293-86313312 None:intergenic 40.0%
TACCTCAATTCAACGAGGTA+AGG + chr3.3:86312763-86312782 MS.gene42687:intron 40.0%
TAGCAATCTCCAACTTCACT+GGG + chr3.3:86313905-86313924 MS.gene42687:CDS 40.0%
TCCAATACCTCAATTCAACG+AGG + chr3.3:86312758-86312777 MS.gene42687:CDS 40.0%
TCCTGAACGATTCGTCATAA+AGG + chr3.3:86311616-86311635 MS.gene42687:intron 40.0%
TCCTTTATGACGAATCGTTC+AGG - chr3.3:86311620-86311639 None:intergenic 40.0%
TCGATTGAGATATACTCGTG+AGG - chr3.3:86310841-86310860 None:intergenic 40.0%
TGAGCAAGTGGATGAAATAG+AGG + chr3.3:86311169-86311188 MS.gene42687:intron 40.0%
TTAAATCTAGGAACCCCACT+TGG + chr3.3:86313299-86313318 MS.gene42687:CDS 40.0%
TTAACAACAGTACTTAGCCC+CGG - chr3.3:86310302-86310321 None:intergenic 40.0%
TTAGTTCCCCTAAATGAGGA+GGG - chr3.3:86311246-86311265 None:intergenic 40.0%
! ATAGTATGAAGCACCACTCA+CGG - chr3.3:86310015-86310034 None:intergenic 40.0%
! CTTTTTATAGGCCTACGTAC+TGG + chr3.3:86313481-86313500 MS.gene42687:intron 40.0%
! GCCAGAAGCAACAAGTTTTT+CGG + chr3.3:86309290-86309309 MS.gene42687:CDS 40.0%
! GGAACCATTTGTTGAATTCG+CGG - chr3.3:86308708-86308727 None:intergenic 40.0%
! GGTTTTCAAAAGAAGGGTCA+AGG + chr3.3:86311521-86311540 MS.gene42687:intron 40.0%
! GTTGGTAGAATTGTTGCTAC+TGG - chr3.3:86312944-86312963 None:intergenic 40.0%
! TGAAGTTTCAGAATGGGTTC+TGG - chr3.3:86308977-86308996 None:intergenic 40.0%
! TGTATTGGAGGAGGATTTTG+GGG + chr3.3:86311271-86311290 MS.gene42687:intron 40.0%
! TTGGCAAGTTGAGACCATAA+GGG + chr3.3:86311079-86311098 MS.gene42687:intron 40.0%
! TTTAGTTCCCCTAAATGAGG+AGG - chr3.3:86311247-86311266 None:intergenic 40.0%
! TTTGGCAAGTTGAGACCATA+AGG + chr3.3:86311078-86311097 MS.gene42687:intron 40.0%
!! ACCACTAGGAGCATTAACTA+TGG - chr3.3:86313998-86314017 None:intergenic 40.0%
!! ACCCTTCTTTTGAAAACCAG+AGG - chr3.3:86311519-86311538 None:intergenic 40.0%
!! ACTAGGAGCATTAACTATGG+CGG - chr3.3:86313995-86314014 None:intergenic 40.0%
!! ATTGGTCTTGTTCAGTTACG+TGG - chr3.3:86313112-86313131 None:intergenic 40.0%
!! GCAACAAGTTTTTCGGACAA+TGG + chr3.3:86309297-86309316 MS.gene42687:CDS 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG - chr3.3:86311488-86311507 None:intergenic 40.0%
!! TCCGAAAAACTTGTTGCTTC+TGG - chr3.3:86309294-86309313 None:intergenic 40.0%
!! TCGTTGAATTGAGGTATTGG+AGG - chr3.3:86312759-86312778 None:intergenic 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG + chr3.3:86311111-86311130 MS.gene42687:intron 40.0%
!!! GTGGCAATCTTTTCAAGTAG+AGG + chr3.3:86312998-86313017 MS.gene42687:CDS 40.0%
AAAGTCACGGTCAATAGTGG+TGG - chr3.3:86310354-86310373 None:intergenic 45.0%
AAATGGAACATTGCGAAGCG+AGG - chr3.3:86310429-86310448 None:intergenic 45.0%
AAGGTAATCCGGATGTTAGC+TGG + chr3.3:86311540-86311559 MS.gene42687:intron 45.0%
AATGGAACATTGCGAAGCGA+GGG - chr3.3:86310428-86310447 None:intergenic 45.0%
ACACCTTATGACTATGGAGC+AGG + chr3.3:86313688-86313707 MS.gene42687:CDS 45.0%
ACCATTCTTGCAGCATGGAT+TGG + chr3.3:86313172-86313191 MS.gene42687:CDS 45.0%
ACCTTATGACTATGGAGCAG+GGG + chr3.3:86313690-86313709 MS.gene42687:CDS 45.0%
AGATCAGCCATCATGACATC+CGG + chr3.3:86313337-86313356 MS.gene42687:CDS 45.0%
AGCTGAACTTTCACACCACT+AGG - chr3.3:86314012-86314031 None:intergenic 45.0%
AGGGGAAGGCTTGGAAAAAA+AGG + chr3.3:86311144-86311163 MS.gene42687:intron 45.0%
ATCGTCAAACGCTGCAAGTA+TGG - chr3.3:86310129-86310148 None:intergenic 45.0%
ATGGGCATGATCTTTGCGAA+TGG - chr3.3:86308729-86308748 None:intergenic 45.0%
ATGTCATGCCCACATGTTTC+GGG + chr3.3:86313262-86313281 MS.gene42687:CDS 45.0%
CACCTTATGACTATGGAGCA+GGG + chr3.3:86313689-86313708 MS.gene42687:CDS 45.0%
CATGTCATGCCCACATGTTT+CGG + chr3.3:86313261-86313280 MS.gene42687:CDS 45.0%
CCACAACAAGGGATACAGTT+GGG + chr3.3:86309952-86309971 MS.gene42687:CDS 45.0%
CCTAAATAGACGCACCCTTA+TGG - chr3.3:86311096-86311115 None:intergenic 45.0%
CCTCAATTCAACGAGGTAAG+GGG + chr3.3:86312765-86312784 MS.gene42687:intron 45.0%
CGATTATCCCCATCAAGGTT+AGG - chr3.3:86309924-86309943 None:intergenic 45.0%
CTAGTTTCATAAACGAGCCC+TGG - chr3.3:86313742-86313761 None:intergenic 45.0%
CTGAAAGTCACGGTCAATAG+TGG - chr3.3:86310357-86310376 None:intergenic 45.0%
GAGGGGAAGAGAAAACTTCT+AGG - chr3.3:86311461-86311480 None:intergenic 45.0%
GCAGACTTTCCGGTTATCAA+TGG - chr3.3:86312364-86312383 None:intergenic 45.0%
GCAGCAACCGTTAATATCCA+AGG - chr3.3:86310332-86310351 None:intergenic 45.0%
GCCATAGTTAATGCTCCTAG+TGG + chr3.3:86313994-86314013 MS.gene42687:CDS 45.0%
GGGGAAGAGAAAACTTCTAG+GGG - chr3.3:86311459-86311478 None:intergenic 45.0%
GTAATCGGCATGTTAGACTC+AGG + chr3.3:86309091-86309110 MS.gene42687:CDS 45.0%
GTCATCTGTGATGGCATAGA+TGG + chr3.3:86312586-86312605 MS.gene42687:CDS 45.0%
GTGAGTGGTGCTTCATACTA+TGG + chr3.3:86310014-86310033 MS.gene42687:CDS 45.0%
GTGTTACCATTCTTGCAGCA+TGG + chr3.3:86313167-86313186 MS.gene42687:CDS 45.0%
GTTGCCACACCTTATGACTA+TGG + chr3.3:86313682-86313701 MS.gene42687:CDS 45.0%
TAGATTTAATGCTGCCGGCA+AGG - chr3.3:86313288-86313307 None:intergenic 45.0%
TATTTGCCACAGCTCCATCT+TGG - chr3.3:86312684-86312703 None:intergenic 45.0%
TCATCGTCGGACATCGTAAT+CGG + chr3.3:86309076-86309095 MS.gene42687:CDS 45.0%
TCCAATCCATGCTGCAAGAA+TGG - chr3.3:86313176-86313195 None:intergenic 45.0%
TCTAATGGCCCCAGAAACAA+AGG - chr3.3:86309835-86309854 None:intergenic 45.0%
TGATAGTTTCAACTGCCCCA+AGG + chr3.3:86313840-86313859 MS.gene42687:CDS 45.0%
TGCTCCATAGTCATAAGGTG+TGG - chr3.3:86313689-86313708 None:intergenic 45.0%
TGCTTCATACTATGGTCTCG+CGG + chr3.3:86310022-86310041 MS.gene42687:CDS 45.0%
TGGGGCAGTTGAAACTATCA+GGG - chr3.3:86313840-86313859 None:intergenic 45.0%
TTATGCAGACTTCCCAGCAA+CGG + chr3.3:86312705-86312724 MS.gene42687:CDS 45.0%
TTGATCTTACCACCGTTGCT+GGG - chr3.3:86312720-86312739 None:intergenic 45.0%
TTGCCGGCAGCATTAAATCT+AGG + chr3.3:86313287-86313306 MS.gene42687:CDS 45.0%
TTGGGGCAGTTGAAACTATC+AGG - chr3.3:86313841-86313860 None:intergenic 45.0%
TTTCATAAACGAGCCCTGGT+TGG - chr3.3:86313738-86313757 None:intergenic 45.0%
TTTGATCTTACCACCGTTGC+TGG - chr3.3:86312721-86312740 None:intergenic 45.0%
! AGCATTAACTATGGCGGAGT+AGG - chr3.3:86313989-86314008 None:intergenic 45.0%
! ATGATCAGGAGTCGATTCCT+TGG - chr3.3:86313860-86313879 None:intergenic 45.0%
! CCATAAGGGTGCGTCTATTT+AGG + chr3.3:86311093-86311112 MS.gene42687:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + chr3.3:86311116-86311135 MS.gene42687:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr3.3:86311135-86311116 None:intergenic 45.0%
! GAAGAGAAAACTTCTAGGGG+TGG - chr3.3:86311456-86311475 None:intergenic 45.0%
! GTATTGGAGGAGGATTTTGG+GGG + chr3.3:86311272-86311291 MS.gene42687:intron 45.0%
! TATTGGAGGAGGATTTTGGG+GGG + chr3.3:86311273-86311292 MS.gene42687:intron 45.0%
! TGATCAGGAGTCGATTCCTT+GGG - chr3.3:86313859-86313878 None:intergenic 45.0%
! TGCAGCAATATTGGTTGCTC+TGG + chr3.3:86310098-86310117 MS.gene42687:CDS 45.0%
!! CTGCTGACTTAACTGAAGCA+AGG + chr3.3:86312395-86312414 MS.gene42687:CDS 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + chr3.3:86311115-86311134 MS.gene42687:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr3.3:86311134-86311115 None:intergenic 45.0%
!! TTCAAGTCAGGTTGGGAACT+CGG - chr3.3:86310200-86310219 None:intergenic 45.0%
!!! ATCACGTCGGTTTTCAAGTC+AGG - chr3.3:86310212-86310231 None:intergenic 45.0%
!!! GGCAAGGGTTTTTTTCCCTT+TGG - chr3.3:86313217-86313236 None:intergenic 45.0%
!!! GTCGGTTTTCAAGTCAGGTT+GGG - chr3.3:86310207-86310226 None:intergenic 45.0%
!! TTAAAATAACTAAATTTAAA+TGG - chr3.3:86313530-86313549 None:intergenic 5.0%
!!! ATTTTATATTTTTCAATTTT+AGG + chr3.3:86309874-86309893 MS.gene42687:intron 5.0%
AATTAGGACGGTGCAAGAGG+CGG + chr3.3:86312630-86312649 MS.gene42687:CDS 50.0%
ACAAGGGATACAGTTGGGCA+TGG + chr3.3:86309957-86309976 MS.gene42687:CDS 50.0%
AGATCGCCAACCTCGATTCA+GGG - chr3.3:86310070-86310089 None:intergenic 50.0%
ATAGAGGAAAATGGGAGGGG+AGG + chr3.3:86311185-86311204 MS.gene42687:intron 50.0%
CATACTATGGTCTCGCGGAA+GGG + chr3.3:86310027-86310046 MS.gene42687:CDS 50.0%
CCACACGATTATCCCCATCA+AGG - chr3.3:86309929-86309948 None:intergenic 50.0%
CCCAACTGTATCCCTTGTTG+TGG - chr3.3:86309955-86309974 None:intergenic 50.0%
CCCCTTACCTCGTTGAATTG+AGG - chr3.3:86312768-86312787 None:intergenic 50.0%
CCTTGATGGGGATAATCGTG+TGG + chr3.3:86309926-86309945 MS.gene42687:CDS 50.0%
CGAAACATGTGGGCATGACA+TGG - chr3.3:86313263-86313282 None:intergenic 50.0%
CGCTCCAATTGCAATCACGT+CGG - chr3.3:86310225-86310244 None:intergenic 50.0%
GATGGCTGATCTGATTGCAG+AGG - chr3.3:86313329-86313348 None:intergenic 50.0%
GCCACAACAAGGGATACAGT+TGG + chr3.3:86309951-86309970 MS.gene42687:CDS 50.0%
GCTGCAAGAATGGTAACACC+TGG - chr3.3:86313166-86313185 None:intergenic 50.0%
GGAAACACAGACACAACTCC+AGG - chr3.3:86308956-86308975 None:intergenic 50.0%
GGAATGGATCCTATTCCACC+CGG + chr3.3:86309318-86309337 MS.gene42687:CDS 50.0%
GGAGCCGCGAATTCAACAAA+TGG + chr3.3:86308701-86308720 MS.gene42687:CDS 50.0%
TACTGACCAAGATGGAGCTG+TGG + chr3.3:86312675-86312694 MS.gene42687:CDS 50.0%
TAGAGGAAAATGGGAGGGGA+GGG + chr3.3:86311186-86311205 MS.gene42687:intron 50.0%
TAGATCGCCAACCTCGATTC+AGG - chr3.3:86310071-86310090 None:intergenic 50.0%
TAGCCTGATATTGCAGCACC+AGG + chr3.3:86313145-86313164 MS.gene42687:intron 50.0%
TCATACTATGGTCTCGCGGA+AGG + chr3.3:86310026-86310045 MS.gene42687:CDS 50.0%
TCCAGGCTGTTGAGCAATTG+AGG - chr3.3:86308939-86308958 None:intergenic 50.0%
TCCCCTGCTCCATAGTCATA+AGG - chr3.3:86313694-86313713 None:intergenic 50.0%
TCGGCATGTTAGACTCAGGT+TGG + chr3.3:86309095-86309114 MS.gene42687:intron 50.0%
TGATGGGGATAATCGTGTGG+CGG + chr3.3:86309929-86309948 MS.gene42687:CDS 50.0%
TGGGCATGACATGGAAGTTC+CGG - chr3.3:86313254-86313273 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + chr3.3:86311121-86311140 MS.gene42687:intron 50.0%
! AAAATGGGAGGGGAGGGTTT+TGG + chr3.3:86311192-86311211 MS.gene42687:intron 50.0%
! AAATGGGAGGGGAGGGTTTT+GGG + chr3.3:86311193-86311212 MS.gene42687:intron 50.0%
! GATCAGGAGTCGATTCCTTG+GGG - chr3.3:86313858-86313877 None:intergenic 50.0%
! TTTTCCTTTTCTGCGGGGGT+TGG - chr3.3:86309413-86309432 None:intergenic 50.0%
!! ACACCTGGTGCTGCAATATC+AGG - chr3.3:86313151-86313170 None:intergenic 50.0%
!! ATTGCAGAGGCACTCCAAGT+GGG - chr3.3:86313316-86313335 None:intergenic 50.0%
!! ATTGGAGGAGGATTTTGGGG+GGG + chr3.3:86311274-86311293 MS.gene42687:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + chr3.3:86311114-86311133 MS.gene42687:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr3.3:86311133-86311114 None:intergenic 50.0%
!!! CGTCGGTTTTCAAGTCAGGT+TGG - chr3.3:86310208-86310227 None:intergenic 50.0%
AAGGTGGTTCCCCTGAATCG+AGG + chr3.3:86310057-86310076 MS.gene42687:CDS 55.0%
AGCCATCATGACATCCGGTC+AGG + chr3.3:86313342-86313361 MS.gene42687:intron 55.0%
AGTTGGGCATGGAACCCACA+CGG + chr3.3:86309968-86309987 MS.gene42687:CDS 55.0%
ATGCAGGTGCCTTTCCAACC+GGG - chr3.3:86309339-86309358 None:intergenic 55.0%
ATTAGGACGGTGCAAGAGGC+GGG + chr3.3:86312631-86312650 MS.gene42687:CDS 55.0%
CATGCAGGTGCCTTTCCAAC+CGG - chr3.3:86309340-86309359 None:intergenic 55.0%
CCTATTCCACCCGGTTGGAA+AGG + chr3.3:86309327-86309346 MS.gene42687:CDS 55.0%
CCTTTCCAACCGGGTGGAAT+AGG - chr3.3:86309330-86309349 None:intergenic 55.0%
CTTTCGCTCTCCCTTGGTAG+GGG + chr3.3:86310173-86310192 MS.gene42687:CDS 55.0%
GATCGCCAACCTCGATTCAG+GGG - chr3.3:86310069-86310088 None:intergenic 55.0%
GATGTGCTTTCGCTCTCCCT+TGG + chr3.3:86310167-86310186 MS.gene42687:CDS 55.0%
GCCTCAATTGCTCAACAGCC+TGG + chr3.3:86308935-86308954 MS.gene42687:CDS 55.0%
GCTTTCGCTCTCCCTTGGTA+GGG + chr3.3:86310172-86310191 MS.gene42687:CDS 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + chr3.3:86311120-86311139 MS.gene42687:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+GGG - chr3.3:86311139-86311120 None:intergenic 55.0%
GTTTGCTCCGCTGGGAATTC+TGG + chr3.3:86310275-86310294 MS.gene42687:CDS 55.0%
TGCTTTCGCTCTCCCTTGGT+AGG + chr3.3:86310171-86310190 MS.gene42687:CDS 55.0%
TGGATCCTATTCCACCCGGT+TGG + chr3.3:86309322-86309341 MS.gene42687:CDS 55.0%
TGGTTCCCCTGAATCGAGGT+TGG + chr3.3:86310061-86310080 MS.gene42687:CDS 55.0%
TGTTTGCGAGTTTGGAGGGG+AGG - chr3.3:86311138-86311119 None:intergenic 55.0%
TTTGCGAGTTTGGAGGGGAG+GGG - chr3.3:86311478-86311497 None:intergenic 55.0%
! AATGGGAGGGGAGGGTTTTG+GGG + chr3.3:86311194-86311213 MS.gene42687:intron 55.0%
! AATTGGAGCGTTCCATGCCG+TGG + chr3.3:86310235-86310254 MS.gene42687:CDS 55.0%
!! GATTGCAGAGGCACTCCAAG+TGG - chr3.3:86313317-86313336 None:intergenic 55.0%
!! GATTTTGGGGGGGGTTTGGA+GGG + chr3.3:86311284-86311303 MS.gene42687:intron 55.0%
!! TTGCAGAGGCACTCCAAGTG+GGG - chr3.3:86313315-86313334 None:intergenic 55.0%
!! TTGGAGGAGGATTTTGGGGG+GGG + chr3.3:86311275-86311294 MS.gene42687:intron 55.0%
AGGTCCAACCCCCGCAGAAA+AGG + chr3.3:86309406-86309425 MS.gene42687:intron 60.0%
ATCGTGTGGCGGCCACAACA+AGG + chr3.3:86309940-86309959 MS.gene42687:CDS 60.0%
CCACATGTTTCGGGCCTTGC+CGG + chr3.3:86313271-86313290 MS.gene42687:CDS 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG + chr3.3:86311125-86311144 MS.gene42687:intron 60.0%
CGCCTGACCGGATGTCATGA+TGG - chr3.3:86313347-86313366 None:intergenic 60.0%
CGGCAAGGCCCGAAACATGT+GGG - chr3.3:86313273-86313292 None:intergenic 60.0%
CTCCGCTGGGAATTCTGGTC+CGG + chr3.3:86310280-86310299 MS.gene42687:CDS 60.0%
CTCGCGGAAGGGACAGCAAA+AGG + chr3.3:86310038-86310057 MS.gene42687:CDS 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr3.3:86311126-86311145 MS.gene42687:intron 60.0%
GCGGAAGGGACAGCAAAAGG+TGG + chr3.3:86310041-86310060 MS.gene42687:CDS 60.0%
GGAACTCGGACCCCTACCAA+GGG - chr3.3:86310186-86310205 None:intergenic 60.0%
TCCGCTGGGAATTCTGGTCC+GGG + chr3.3:86310281-86310300 MS.gene42687:CDS 60.0%
TCGTGTGGCGGCCACAACAA+GGG + chr3.3:86309941-86309960 MS.gene42687:CDS 60.0%
TGCAGACTTCCCAGCAACGG+TGG + chr3.3:86312708-86312727 MS.gene42687:CDS 60.0%
! GTGCAAGAGGCGGGTGGATT+AGG + chr3.3:86312640-86312659 MS.gene42687:CDS 60.0%
!! ATCGTGGTGGTTTGCTCCGC+TGG + chr3.3:86310266-86310285 MS.gene42687:CDS 60.0%
!! ATGGGAGGGGAGGGTTTTGG+GGG + chr3.3:86311195-86311214 MS.gene42687:intron 60.0%
!! GGAGGATTTTGGGGGGGGTT+TGG + chr3.3:86311280-86311299 MS.gene42687:intron 60.0%
!! GGATTTTGGGGGGGGTTTGG+AGG + chr3.3:86311283-86311302 MS.gene42687:intron 60.0%
!! TCGTGGTGGTTTGCTCCGCT+GGG + chr3.3:86310267-86310286 MS.gene42687:CDS 60.0%
AACCCACACGGCCTCGACAG+CGG + chr3.3:86309980-86309999 MS.gene42687:CDS 65.0%
CACCACGATGCCGTGCTCCA+CGG - chr3.3:86310255-86310274 None:intergenic 65.0%
CAGGTGCCTTTCCAACCGGG+TGG - chr3.3:86309336-86309355 None:intergenic 65.0%
CCCCGGACCAGAATTCCCAG+CGG - chr3.3:86310285-86310304 None:intergenic 65.0%
CCGCTGGGAATTCTGGTCCG+GGG + chr3.3:86310282-86310301 MS.gene42687:CDS 65.0%
CCGGCAAGGCCCGAAACATG+TGG - chr3.3:86313274-86313293 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG + chr3.3:86311124-86311143 MS.gene42687:intron 65.0%
GCGTTCCATGCCGTGGAGCA+CGG + chr3.3:86310242-86310261 MS.gene42687:CDS 65.0%
GGGAACTCGGACCCCTACCA+AGG - chr3.3:86310187-86310206 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG + chr3.3:86311130-86311149 MS.gene42687:intron 65.0%
!!! TGGGAGGGGAGGGTTTTGGG+GGG + chr3.3:86311196-86311215 MS.gene42687:intron 65.0%
ACACGGCCTCGACAGCGGCA+GGG + chr3.3:86309985-86310004 MS.gene42687:CDS 70.0%
AGGACGGTGCAAGAGGCGGG+TGG + chr3.3:86312634-86312653 MS.gene42687:CDS 70.0%
CGATGCCGTGCTCCACGGCA+TGG - chr3.3:86310250-86310269 None:intergenic 70.0%
CGTGGAGCACGGCATCGTGG+TGG + chr3.3:86310253-86310272 MS.gene42687:CDS 70.0%
GCGGCAGGGAATGCCGTGAG+TGG + chr3.3:86309999-86310018 MS.gene42687:CDS 70.0%
GGCATTCCCTGCCGCTGTCG+AGG - chr3.3:86309994-86310013 None:intergenic 70.0%
GGGGAAGGGAGGGGAAGGCT+TGG + chr3.3:86311135-86311154 MS.gene42687:intron 70.0%
TGCCGCTGTCGAGGCCGTGT+GGG - chr3.3:86309985-86310004 None:intergenic 70.0%
TGCCGTGGAGCACGGCATCG+TGG + chr3.3:86310250-86310269 MS.gene42687:CDS 70.0%
CACACGGCCTCGACAGCGGC+AGG + chr3.3:86309984-86310003 MS.gene42687:CDS 75.0%
CTGCCGCTGTCGAGGCCGTG+TGG - chr3.3:86309986-86310005 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 86308698 86314191 86308698 ID=MS.gene42687
chr3.3 mRNA 86308698 86314191 86308698 ID=MS.gene42687.t1;Parent=MS.gene42687
chr3.3 exon 86308698 86308771 86308698 ID=MS.gene42687.t1.exon1;Parent=MS.gene42687.t1
chr3.3 CDS 86308698 86308771 86308698 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
chr3.3 exon 86308859 86309112 86308859 ID=MS.gene42687.t1.exon2;Parent=MS.gene42687.t1
chr3.3 CDS 86308859 86309112 86308859 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
chr3.3 exon 86309283 86309394 86309283 ID=MS.gene42687.t1.exon3;Parent=MS.gene42687.t1
chr3.3 CDS 86309283 86309394 86309283 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
chr3.3 exon 86309896 86310412 86309896 ID=MS.gene42687.t1.exon4;Parent=MS.gene42687.t1
chr3.3 CDS 86309896 86310412 86309896 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
chr3.3 exon 86312316 86312416 86312316 ID=MS.gene42687.t1.exon5;Parent=MS.gene42687.t1
chr3.3 CDS 86312316 86312416 86312316 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
chr3.3 exon 86312537 86312779 86312537 ID=MS.gene42687.t1.exon6;Parent=MS.gene42687.t1
chr3.3 CDS 86312537 86312779 86312537 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
chr3.3 exon 86312937 86313051 86312937 ID=MS.gene42687.t1.exon7;Parent=MS.gene42687.t1
chr3.3 CDS 86312937 86313051 86312937 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
chr3.3 exon 86313148 86313358 86313148 ID=MS.gene42687.t1.exon8;Parent=MS.gene42687.t1
chr3.3 CDS 86313148 86313358 86313148 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
chr3.3 exon 86313632 86314191 86313632 ID=MS.gene42687.t1.exon9;Parent=MS.gene42687.t1
chr3.3 CDS 86313632 86314191 86313632 ID=cds.MS.gene42687.t1;Parent=MS.gene42687.t1
Gene Sequence

>MS.gene42687

ATGGGAGCCGCGAATTCAACAAATGGTTCCATTCGCAAAGATCATGCCCATGTTTTAAACACTGTGTTAAGAAGGTAATTAATTGCATATATATCATGATATTCAATTAGCTAGTGTTTTCAAATGTGATTAATTAATTATTGATCATGTGAATTGTTTAGGAATGAAAAAGCTCTAGTACATAACTATAAGCATGGATTCTCAGGCTTCGCAGCTCGTTTATCAAAAAATGAAGCAGCCTCAATTGCTCAACAGCCTGGAGTTGTGTCTGTGTTTCCAGAACCCATTCTGAAACTTCACACAACTCATTCTTGGGATTTCCTTAAGTTGCAAACTCATGTCAAAATTGACAGCACACTCTCCAATTCTTCTTCTCATTCATCGTCGGACATCGTAATCGGCATGTTAGACTCAGGTTGGTTGTTTTTTTGGTATAGATATAGAAGGAGTACATATGTAATGTACTTATAACTAGCTAACTAAAAATTAAATCATATCCAAAGCTATTACTCTATCCATTTCACGAGTTTAATTATATTGGTACTCAATTGATTTGTTTTATCATTTTAATAATTGATTATTCAGGTATATGGCCAGAAGCAACAAGTTTTTCGGACAATGGAATGGATCCTATTCCACCCGGTTGGAAAGGCACCTGCATGACATCAAATGACTTCAACTCATCTAATTGTAATAGGTAGATAGAAAAGGTCCAACCCCCGCAGAAAAGGAAAAAAAAAGCAATAAAAGAAAAATGAAATCAACTTAGTGCTATATAATAACCAAACAAAGATCCAACACTTAACTGATTGAGCTTAATAAATTAAGGCCCTCTTGCATTTTTTAATCACTATACATTACTAGTATAAAAAATCTAGAACGCATGGAAAAATATACAATAATTCTTTGTAGTTTGTAAATAAGCATAATTTAATTTTTAAAAGTATCAACCCGATTAAACCTAACAAAGCTATTATATTCTTCATGTATTCGGTTTGGTATAGATTTTGTAACAAGATATTGCAAGATACAAATCAAAAGAAGCCGAAAGTTTTAATTGTTCAGAATTTCCTAAAAGAAAACAAATGAAACTTATCTTGTAACCAAAAATATAATCAAACTTATCTATGTTTACCTTTGTTTCTGGGGCCATTAGAGTAGCATTGCCATAATTTTATTTTATATTTTTCAATTTTAGGAAGATAATAGGAGCAAGGTATTACCCTAACCTTGATGGGGATAATCGTGTGGCGGCCACAACAAGGGATACAGTTGGGCATGGAACCCACACGGCCTCGACAGCGGCAGGGAATGCCGTGAGTGGTGCTTCATACTATGGTCTCGCGGAAGGGACAGCAAAAGGTGGTTCCCCTGAATCGAGGTTGGCGATCTACAAAGTGTGCAGCAATATTGGTTGCTCTGGCTCTGCCATACTTGCAGCGTTTGACGATGCAATTTCTGATGGAGTTGATGTGCTTTCGCTCTCCCTTGGTAGGGGTCCGAGTTCCCAACCTGACTTGAAAACCGACGTGATTGCAATTGGAGCGTTCCATGCCGTGGAGCACGGCATCGTGGTGGTTTGCTCCGCTGGGAATTCTGGTCCGGGGCTAAGTACTGTTGTTAATGATGCACCTTGGATATTAACGGTTGCTGCCACCACTATTGACCGTGACTTTCAGTCTAACGTTGTCTTGGGTAATAACAAAGTTGTCAAGGTACACTTTATGCCCTCGCTTCGCAATGTTCCATTTATATATATATTTTAAAAGTGTCAACATTTTATAGAGTCTTCTTTTTAAGAATAAACAAATAAATACGTATTTACAATTAAGTTGATGAATTTGATTCACTTATTAATTTAATTCATTTTTTTTTTCAAATGGAAAATTTAATATGACAGTTAAATACATGGGTAAAAAATAATGTTGGTTTTCATACATGAAATGAAATTGCTCCCAATCCCCATTCACCATATTTTTGGCGAAAGCATTTTATCAGTTTTTGTGTATGTAGAGAAAACATAGTTCCATTAATCTCGTTGGTCCAAAAAAAAACTATTGTTTCATTCCATTTTATTTCTAATTTCTACTGCACTTTACCCATTCACCTTATAATGCTTTATAGAAAGAAAATATAATGTCCTCACGAGTATATCTCAATCGATATGAACATCACATCATATACCAGGGGTTAGAGTTTAAATCACAAATTCTTCACTTATTCATTATAAAGATGAATTTTTAGCCATTAATCTACCAGACAAAAAGAAAGAAAAGGGAAAACATAGCATATTCCCTTGCTTTTTTTTTTTCTTCCAAGTGTTGGATTTTCTTCTTTTTTTTCTTGAGGAGTTGGATATATTAATTACTACGGTTTAACATTTGGCAAGTTGAGACCATAAGGGTGCGTCTATTTAGGCTTTGTTTGCGAGTTTGGAGGGGAAGGGAGGGGAAGGCTTGGAAAAAAAGGAATGAGCAAGTGGATGAAATAGAGGAAAATGGGAGGGGAGGGTTTTGGGGGGTTAACTTTTCTTCATAATACTAAACCCTCCTCATTTAGGGGAACTAAAAAATTGTATTGGAGGAGGATTTTGGGGGGGGTTTGGAGGGTTTACATGAATTCTTCAAATTTAATCTACGTTGTTATATTATTTTTAAAATTAAGAATATAGTAATCATATGCATTAATTTATCATTATCTAAAAACCTACTCTTTTAATTTATTTGAAAGATTTCTCCATTTTTCGTCATATTTTCCACCCCTAGAAGTTTTCTCTTCCCCTCCCCTCCAAACTCGCAAACAAAGCCTTAGTGTTAAACCTCTGGTTTTCAAAAGAAGGGTCAAGGTAATCCGGATGTTAGCTGGTAAGTAAGTAAAGTTGACAAAGAATTATTTTCATCAAAATCGAACTCGGTTTCTCCTGAACGATTCGTCATAAAGGAAACACATTAGTCACTTAAGTTCAATCATTTGGTTATGGTGTGTCTATTTAAGGTACAAAGAATAAGTTAAGAAATATTTTAATTTTTGAAAGAAAAAAAATGTATTATCGAATAAGATGTAATATACTTTTTATCATCTAAAATAAATATTAATTAGTTTTACAAGTTTGGGATGATAAACATTTTTATTCAAATATTTTTTTTCGTGTTTTCAACAAGGATTGTAATATCTAACGCATTCATTAGACTTTTTAGGAAAATATTCCATTTATGAGATTTTATTAATGTATAAATATTTCTTAGGTTTTTGTGTATATTGAGTAAAAATGTATTTTTGTATACTATATGTAGATGGTGATTTTTTTTTTCTATGGATTAAAAATTATGTTGTTTGAAGATGAAAAAAGTCAGCATCAACACTACAAAACTATATGTAGATGGTGATTTTTTTTCTATGGATTAAAAATTATGTTATTTGAAGATAAAAAAAGTCAGCATCAACACTACAAAAGATGTACTATGTATAAATTTTAATGCGAATAGAGAAAAAAAAAATGTTTTTGTTGTCTAAATAACATTGTTGCTCATCAAACTGATTTTGTTTTTGATTAAATAAAATGTTGGTTAAATTATGCTCTATGTGTTATGACTTATGCTCATAAATGCTGTACTTTAGGGTCAAGCCATAAATTTCTCCCCTCTTTCAAAATCTGCTGATTATCCATTGATAACCGGAAAGTCTGCCAAGACAATTACTGCTGACTTAACTGAAGCAAGGTACATACACAAAATCTATCTAAAAATGAATAAACTTAAACATGTTTGTTCTGCATAATCAAAAACCCAAAACCACGTTGTTTTAAAGTTAGGCAAACTAACATTCTTTATGAAATGCAGTCAGTGTCATCCAAGTTCATTAGATAAGAAAAAAGTTGAAGGAAATATTGTCATCTGTGATGGCATAGATGGTGATTATTCAACCGATGAAAAAATTAGGACGGTGCAAGAGGCGGGTGGATTAGGTCTTGTTCATATTACTGACCAAGATGGAGCTGTGGCAAATATTTATGCAGACTTCCCAGCAACGGTGGTAAGATCAAAAGATGCTGTCACACTCCTCCAATACCTCAATTCAACGAGGTAAGGGGAAATTTACATTGGCATCCAATCACACATCTTTAATTTGTCACATGAACATTTTTTTTAATAAAAGTATTAAAATTTGATTTAATTCTAAAATCAACAATGGTGGTAGTTAATTTTATTTATTGTATTTTTGCATAAAAATAATCTGAAGCAATCCAGTAGCAACAATTCTACCAACAGTCACAGTCATAGATTATAAGCCTGCACCTATGGTGGCAATCTTTTCAAGTAGAGGACCTTCAGCTCTTTCAAAGAATATTCTCAAGGTAAAAATATATATATAACGATATAGCTAGATAGGGTTATACATAATTATCATCAATCCACGTAACTGAACAAGACCAATAATTTGTTCTTTGTAGCCTGATATTGCAGCACCAGGTGTTACCATTCTTGCAGCATGGATTGGAAATGATGACGAAAATGTTCCAAAGGGAAAAAAACCCTTGCCATATAAACTTGAAACCGGAACTTCCATGTCATGCCCACATGTTTCGGGCCTTGCCGGCAGCATTAAATCTAGGAACCCCACTTGGAGTGCCTCTGCAATCAGATCAGCCATCATGACATCCGGTCAGGCGTTTATTTTTAAATACACAAATCAATCATGAATTTAGTGTGGATGATCAGTTAATTTTATCCCAAAATTAGTTCTAAATTGATTTTTAAAATTAAAATTTATCGTCTACATTGGTCTTTTTATAGGCCTACGTACTGGTTTAGTTTCATAAGGAAATATAACCATTTAAATTTAGTTATTTTAATTTTTTCTTCATAGATCAAATTTTCTAATAACCACTACAATTTGTCTAGCAACTCATCAACTTCTATTTTTTTGATATGCAGCAACACAAATTAATAATATGAAGGCTCCCATTACTACAGATTTAGGGTCAGTTGCCACACCTTATGACTATGGAGCAGGGGACATAACAACAATTGAATCATTCCAACCAGGGCTCGTTTATGAAACTAGCACCATTGAATACTTGAACTACTTGTGTTACATAGGATACAACACAACCACTATTAAGGTTATTTCAAAAACTGTCCCTGATAGTTTCAACTGCCCCAAGGAATCGACTCCTGATCATATTTCCAATATCAATTATCCTTCCATAGCAATCTCCAACTTCACTGGGAAAGAAACTGTGAATGTGAGTAGAACTGTTACAAATGTTGGTGAAGAGGATGAAGTAGCCTACTCCGCCATAGTTAATGCTCCTAGTGGTGTGAAAGTTCAGCTGATTCCAGAGAAACTACAATTTACAAAAAGCAATAAAAATCAAAGCTACCAAGCTATTTTCTCTACTACTTTAACCTCGTTGAACAAAGATCTGTTTGGATCCATTACATGGAGTAATGGTAAATATAGTGTTCGAAGTCCTTTTGTACTAACTATGTAG
Protein sequence

>MS.gene42687.t1

MGAANSTNGSIRKDHAHVLNTVLRRNEKALVHNYKHGFSGFAARLSKNEAASIAQQPGVVSVFPEPILKLHTTHSWDFLKLQTHVKIDSTLSNSSSHSSSDIVIGMLDSGIWPEATSFSDNGMDPIPPGWKGTCMTSNDFNSSNCNRKIIGARYYPNLDGDNRVAATTRDTVGHGTHTASTAAGNAVSGASYYGLAEGTAKGGSPESRLAIYKVCSNIGCSGSAILAAFDDAISDGVDVLSLSLGRGPSSQPDLKTDVIAIGAFHAVEHGIVVVCSAGNSGPGLSTVVNDAPWILTVAATTIDRDFQSNVVLGNNKVVKGQAINFSPLSKSADYPLITGKSAKTITADLTEASQCHPSSLDKKKVEGNIVICDGIDGDYSTDEKIRTVQEAGGLGLVHITDQDGAVANIYADFPATVVRSKDAVTLLQYLNSTSNPVATILPTVTVIDYKPAPMVAIFSSRGPSALSKNILKPDIAAPGVTILAAWIGNDDENVPKGKKPLPYKLETGTSMSCPHVSGLAGSIKSRNPTWSASAIRSAIMTSATQINNMKAPITTDLGSVATPYDYGAGDITTIESFQPGLVYETSTIEYLNYLCYIGYNTTTIKVISKTVPDSFNCPKESTPDHISNINYPSIAISNFTGKETVNVSRTVTNVGEEDEVAYSAIVNAPSGVKVQLIPEKLQFTKSNKNQSYQAIFSTTLTSLNKDLFGSITWSNGKYSVRSPFVLTM