Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43354.t1 | QCW63932.1 | 100 | 843 | 0 | 0 | 1 | 843 | 1 | 843 | 0.00E+00 | 1704.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43354.t1 | Q9ASR1 | 93.8 | 843 | 52 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1615.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43354.t1 | A0A4Y5P838 | 100.0 | 843 | 0 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1704.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene43354 | MS.gene063366 | PPI |
MS.gene43354 | MS.gene26537 | PPI |
MS.gene43354 | MS.gene59979 | PPI |
MS.gene43354 | MS.gene060216 | PPI |
MS.gene43354 | MS.gene41890 | PPI |
MS.gene43354 | MS.gene058595 | PPI |
MS.gene43354 | MS.gene039110 | PPI |
MS.gene066163 | MS.gene43354 | PPI |
MS.gene43354 | MS.gene008760 | PPI |
MS.gene040581 | MS.gene43354 | PPI |
MS.gene43354 | MS.gene63721 | PPI |
MS.gene43354 | MS.gene62623 | PPI |
MS.gene055714 | MS.gene43354 | PPI |
MS.gene036653 | MS.gene43354 | PPI |
MS.gene43354 | MS.gene040156 | PPI |
MS.gene43354 | MS.gene81858 | PPI |
MS.gene43354 | MS.gene39618 | PPI |
MS.gene58774 | MS.gene43354 | PPI |
MS.gene43354 | MS.gene068080 | PPI |
MS.gene068078 | MS.gene43354 | PPI |
MS.gene43354 | MS.gene41888 | PPI |
MS.gene015588 | MS.gene43354 | PPI |
MS.gene041404 | MS.gene43354 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43354.t1 | MTR_1g048000 | 98.814 | 843 | 10 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1744 |
MS.gene43354.t1 | MTR_2g069310 | 97.272 | 843 | 23 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1721 |
MS.gene43354.t1 | MTR_2g069050 | 97.272 | 843 | 23 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1720 |
MS.gene43354.t1 | MTR_2g069320 | 86.002 | 843 | 118 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1523 |
MS.gene43354.t1 | MTR_4g116430 | 39.141 | 838 | 473 | 10 | 20 | 834 | 140 | 963 | 0.0 | 622 |
MS.gene43354.t1 | MTR_4g119340 | 29.921 | 1016 | 490 | 26 | 16 | 829 | 11 | 1006 | 1.10e-135 | 429 |
MS.gene43354.t1 | MTR_7g009740 | 40.972 | 144 | 83 | 2 | 19 | 162 | 67 | 208 | 1.21e-23 | 107 |
MS.gene43354.t1 | MTR_3g097250 | 41.667 | 144 | 71 | 2 | 18 | 161 | 82 | 212 | 1.60e-22 | 103 |
MS.gene43354.t1 | MTR_1g052535 | 37.580 | 157 | 81 | 2 | 6 | 162 | 70 | 209 | 1.90e-21 | 99.0 |
MS.gene43354.t1 | MTR_1g052535 | 37.580 | 157 | 81 | 2 | 6 | 162 | 70 | 209 | 4.73e-21 | 99.0 |
MS.gene43354.t1 | MTR_4g079360 | 40.816 | 147 | 65 | 4 | 17 | 162 | 55 | 180 | 1.69e-20 | 97.4 |
MS.gene43354.t1 | MTR_4g101750 | 26.202 | 416 | 219 | 14 | 393 | 793 | 408 | 750 | 1.94e-20 | 97.4 |
MS.gene43354.t1 | MTR_4g101750 | 38.125 | 160 | 80 | 3 | 5 | 162 | 79 | 221 | 7.77e-17 | 85.9 |
MS.gene43354.t1 | MTR_3g101820 | 93.617 | 47 | 3 | 0 | 472 | 518 | 19 | 65 | 2.22e-20 | 86.7 |
MS.gene43354.t1 | MTR_7g044770 | 39.333 | 150 | 68 | 4 | 19 | 162 | 62 | 194 | 3.98e-17 | 86.7 |
MS.gene43354.t1 | MTR_4g101750 | 38.125 | 160 | 80 | 3 | 5 | 162 | 79 | 221 | 6.32e-17 | 85.9 |
MS.gene43354.t1 | MTR_4g101750 | 25.648 | 386 | 200 | 13 | 393 | 763 | 408 | 721 | 1.92e-16 | 84.3 |
MS.gene43354.t1 | MTR_2g020660 | 35.099 | 151 | 73 | 4 | 19 | 162 | 55 | 187 | 1.05e-13 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43354.t1 | AT1G56070 | 93.832 | 843 | 52 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1666 |
MS.gene43354.t1 | AT1G56070 | 93.832 | 843 | 52 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1666 |
MS.gene43354.t1 | AT1G56070 | 93.832 | 843 | 52 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1666 |
MS.gene43354.t1 | AT3G12915 | 83.511 | 843 | 84 | 4 | 1 | 843 | 1 | 788 | 0.0 | 1444 |
MS.gene43354.t1 | AT1G06220 | 37.618 | 848 | 492 | 10 | 19 | 843 | 138 | 971 | 0.0 | 607 |
MS.gene43354.t1 | AT1G06220 | 37.618 | 848 | 492 | 10 | 19 | 843 | 138 | 971 | 0.0 | 607 |
MS.gene43354.t1 | AT1G06220 | 37.618 | 848 | 492 | 10 | 19 | 843 | 138 | 971 | 0.0 | 607 |
MS.gene43354.t1 | AT5G25230 | 37.190 | 847 | 497 | 8 | 19 | 843 | 124 | 957 | 0.0 | 599 |
MS.gene43354.t1 | AT5G25230 | 37.190 | 847 | 497 | 8 | 19 | 843 | 124 | 957 | 0.0 | 599 |
MS.gene43354.t1 | AT3G22980 | 30.396 | 1010 | 481 | 27 | 19 | 829 | 9 | 995 | 2.60e-139 | 439 |
MS.gene43354.t1 | AT3G22980 | 30.396 | 1010 | 481 | 27 | 19 | 829 | 9 | 995 | 2.60e-139 | 439 |
MS.gene43354.t1 | AT3G22980 | 30.396 | 1010 | 481 | 27 | 19 | 829 | 9 | 995 | 2.60e-139 | 439 |
MS.gene43354.t1 | AT5G13650 | 39.869 | 153 | 76 | 1 | 10 | 162 | 74 | 210 | 5.19e-24 | 108 |
MS.gene43354.t1 | AT5G13650 | 39.869 | 153 | 76 | 1 | 10 | 162 | 73 | 209 | 5.22e-24 | 108 |
MS.gene43354.t1 | AT5G39900 | 42.361 | 144 | 75 | 2 | 19 | 162 | 66 | 201 | 6.31e-24 | 108 |
MS.gene43354.t1 | AT1G62750 | 25.806 | 465 | 275 | 15 | 332 | 793 | 357 | 754 | 3.57e-21 | 99.8 |
MS.gene43354.t1 | AT1G62750 | 38.095 | 147 | 73 | 2 | 18 | 162 | 95 | 225 | 7.83e-16 | 82.4 |
MS.gene43354.t1 | AT5G08650 | 40.972 | 144 | 72 | 2 | 18 | 161 | 85 | 215 | 6.44e-21 | 98.6 |
MS.gene43354.t1 | AT5G08650 | 40.972 | 144 | 72 | 2 | 18 | 161 | 85 | 215 | 7.57e-21 | 98.6 |
MS.gene43354.t1 | AT2G31060 | 40.816 | 147 | 65 | 4 | 17 | 162 | 57 | 182 | 8.72e-21 | 98.2 |
MS.gene43354.t1 | AT2G31060 | 39.735 | 151 | 65 | 5 | 17 | 162 | 57 | 186 | 5.62e-19 | 92.4 |
MS.gene43354.t1 | AT1G45332 | 23.701 | 481 | 263 | 18 | 332 | 793 | 328 | 723 | 6.51e-18 | 89.4 |
MS.gene43354.t1 | AT1G45332 | 37.333 | 150 | 71 | 4 | 19 | 162 | 65 | 197 | 2.95e-16 | 84.0 |
MS.gene43354.t1 | AT1G45332 | 23.701 | 481 | 263 | 18 | 332 | 793 | 148 | 543 | 7.27e-18 | 88.6 |
MS.gene43354.t1 | AT2G45030 | 23.701 | 481 | 263 | 18 | 332 | 793 | 328 | 723 | 7.67e-18 | 89.0 |
MS.gene43354.t1 | AT2G45030 | 37.333 | 150 | 71 | 4 | 19 | 162 | 65 | 197 | 3.22e-16 | 84.0 |
Find 259 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTCCAGGGACAAAATT+TGG | 0.217235 | 1.4:+33065946 | None:intergenic |
AGGTTTGAAGGTCAGAATTA+TGG | 0.233507 | 1.4:-33065971 | MS.gene43354:CDS |
CCCAGTGTGTCTTTGATCAT+TGG | 0.233983 | 1.4:-33064802 | MS.gene43354:CDS |
AAAATGTATGCCTCAAAATT+TGG | 0.234564 | 1.4:-33066507 | MS.gene43354:CDS |
AGGATCTTGCCAAGAAAATT+TGG | 0.236195 | 1.4:-33065303 | MS.gene43354:CDS |
CACTGTTGCTTTGGTTGGTT+TGG | 0.249758 | 1.4:-33065836 | MS.gene43354:CDS |
GCCAAGAAAATTTGGTGTTT+TGG | 0.256520 | 1.4:-33065295 | MS.gene43354:CDS |
CTGACCCTGTTGTGTCATTC+AGG | 0.257068 | 1.4:-33065513 | MS.gene43354:CDS |
CTCCCTGTCATTGAGTCCTT+TGG | 0.264856 | 1.4:-33064869 | MS.gene43354:CDS |
GTTTGTACTATTGAGGAGTC+TGG | 0.274916 | 1.4:-33065631 | MS.gene43354:CDS |
GTGTCCAGAGAACTGTTATT+TGG | 0.279555 | 1.4:-33065903 | MS.gene43354:CDS |
TTCTGCTGGTTTGCATGGTT+GGG | 0.288108 | 1.4:-33066553 | MS.gene43354:CDS |
ATGTTGGGCCCGGTGGTCTC+AGG | 0.291091 | 1.4:+33065271 | None:intergenic |
CACAGCCAAACCCAGGCTTC+TGG | 0.302051 | 1.4:-33065029 | MS.gene43354:CDS |
TTTCTGCTGGTTTGCATGGT+TGG | 0.318008 | 1.4:-33066554 | MS.gene43354:CDS |
CAAGATCTTAGAACGATTCT+TGG | 0.325192 | 1.4:+33065348 | None:intergenic |
TGAGAATGCTAATGTGATTA+TGG | 0.341247 | 1.4:-33066640 | MS.gene43354:CDS |
CAAACCTGTGGAAACCTTAC+CGG | 0.346294 | 1.4:+33065987 | None:intergenic |
GGACATCACCTGCAACTTCC+TGG | 0.349353 | 1.4:+33067045 | None:intergenic |
AAAGCAACTGTTCCTTTCTC+TGG | 0.351057 | 1.4:+33066576 | None:intergenic |
CAGTTGAGAGCTGCAACATC+TGG | 0.351506 | 1.4:-33064836 | MS.gene43354:CDS |
GTCCTTCTCATCAGACTTCA+TGG | 0.358364 | 1.4:+33066275 | None:intergenic |
TGATGAGTTACGTCGTATTA+TGG | 0.359602 | 1.4:-33067793 | MS.gene43354:CDS |
GATCTGTTTGAAAGATTTGC+AGG | 0.360046 | 1.4:-33065569 | MS.gene43354:CDS |
CAGGTGCTTCCTTGAGCTCC+AGG | 0.361865 | 1.4:-33066703 | MS.gene43354:CDS |
TGAACAGCAACACGCACAAC+AGG | 0.361874 | 1.4:+33065727 | None:intergenic |
GGTTTGAAGGTCAGAATTAT+GGG | 0.372517 | 1.4:-33065970 | MS.gene43354:CDS |
TCTAGTAGGGCAGTACTTGC+TGG | 0.374826 | 1.4:+33066207 | None:intergenic |
TTCCTTGAGCTCCAGGTTGA+TGG | 0.376003 | 1.4:-33066696 | MS.gene43354:CDS |
CACCATGACCTCAGATCCTT+TGG | 0.379275 | 1.4:-33064777 | MS.gene43354:CDS |
CCAGTGTGTCTTTGATCATT+GGG | 0.381895 | 1.4:-33064801 | MS.gene43354:CDS |
CGAAGCTGAACCAGTATTCT+TGG | 0.382723 | 1.4:+33066410 | None:intergenic |
GTCCTTCAGGATCACAGTTT+CGG | 0.383346 | 1.4:+33066085 | None:intergenic |
TCATCAATGGCTTACCCATC+AGG | 0.390366 | 1.4:+33066253 | None:intergenic |
CCAAGATGATGGAGAGGCTC+TGG | 0.394619 | 1.4:-33066473 | MS.gene43354:CDS |
GATCTTCCCAAGCTTGTTGA+AGG | 0.394760 | 1.4:-33065688 | MS.gene43354:CDS |
ATGATTCCAGCATCTGATAA+AGG | 0.394970 | 1.4:-33066039 | MS.gene43354:CDS |
GCTTCTGGAGCCTGTTTACA+TGG | 0.395432 | 1.4:-33065014 | MS.gene43354:CDS |
AATTCTCAACACGGTACCTC+TGG | 0.395681 | 1.4:+33066148 | None:intergenic |
ATCAAGGATTCCGTGGTTGC+TGG | 0.395800 | 1.4:-33065208 | MS.gene43354:CDS |
TCCACTTCTTGGTGATGTTA+TGG | 0.395915 | 1.4:-33066604 | MS.gene43354:CDS |
TAAAGCATCAGAGGTCCTTC+AGG | 0.397098 | 1.4:+33066072 | None:intergenic |
TGGATTTCCACCATGTAAAC+AGG | 0.399272 | 1.4:+33065004 | None:intergenic |
ATTATTGCCCAGGAAGTTGC+AGG | 0.399303 | 1.4:-33067053 | MS.gene43354:CDS |
AAGATCTTGTCCGAACAGTA+TGG | 0.399948 | 1.4:-33065334 | MS.gene43354:CDS |
GAAAGATCATCATTTCTAGT+AGG | 0.402914 | 1.4:+33066193 | None:intergenic |
TGGCCGTGTGTTTGCCGGTA+AGG | 0.405219 | 1.4:-33066001 | MS.gene43354:CDS |
ACATATGAAGATCCACTTCT+TGG | 0.405824 | 1.4:-33066615 | MS.gene43354:CDS |
GTACAGCCGGTTGTGCTTGT+TGG | 0.411197 | 1.4:+33065444 | None:intergenic |
TTGTGGTAACACTGTTGCTT+TGG | 0.416139 | 1.4:-33065845 | MS.gene43354:CDS |
TGCATAACACGTTTCATCAA+TGG | 0.416590 | 1.4:+33066240 | None:intergenic |
CAAGAGCTTGCTCAGGAGCT+TGG | 0.418120 | 1.4:+33064984 | None:intergenic |
TGTTGAAGGTCTCAAACGTT+TGG | 0.418443 | 1.4:-33065674 | MS.gene43354:CDS |
TCAGTATTTGAATGAAATCA+AGG | 0.419099 | 1.4:-33065224 | MS.gene43354:CDS |
TCCTATTGTGCCCTCATCAA+TGG | 0.419375 | 1.4:+33065384 | None:intergenic |
GTCGCAGCACAGTTTCAGTT+TGG | 0.422669 | 1.4:+33066775 | None:intergenic |
AAATGGACCACCAAGAATAC+TGG | 0.423352 | 1.4:-33066420 | MS.gene43354:CDS |
AGGCTCCAGAAGCCTGGGTT+TGG | 0.428478 | 1.4:+33065024 | None:intergenic |
AACCTTCCTTTATCAGATGC+TGG | 0.429298 | 1.4:+33066033 | None:intergenic |
TATGGTTGTTTGTACTATTG+AGG | 0.430770 | 1.4:-33065638 | MS.gene43354:CDS |
GCCATTGATGAGGGCACAAT+AGG | 0.431150 | 1.4:-33065385 | MS.gene43354:CDS |
CACATATCAACCACCATGTT+GGG | 0.432084 | 1.4:+33065256 | None:intergenic |
ACAAGCTGCACAGCTTGTTA+TGG | 0.432329 | 1.4:-33064744 | MS.gene43354:CDS |
CCATCCAAATAACAGTTCTC+TGG | 0.434711 | 1.4:+33065899 | None:intergenic |
GATGTTGTAAAGTGGGGTAC+CGG | 0.435287 | 1.4:+33064901 | None:intergenic |
CCGTGTTGAGAATTTGTATG+AGG | 0.437541 | 1.4:-33066139 | MS.gene43354:CDS |
ACTGTGCTGCGACAAGCTCT+TGG | 0.438603 | 1.4:-33066765 | MS.gene43354:CDS |
AGATTTGCAGGATGATTTCA+TGG | 0.438730 | 1.4:-33065557 | MS.gene43354:CDS |
TGGCCTATGCTCACAAAGCT+AGG | 0.438912 | 1.4:-33066303 | MS.gene43354:CDS |
AAGCTCTTGGAGAAAGGATT+AGG | 0.440249 | 1.4:-33066752 | MS.gene43354:CDS |
ACCTCAGATCCTTTGGAGGC+TGG | 0.443218 | 1.4:-33064770 | MS.gene43354:CDS |
GTCTCCCTGAATGACACAAC+AGG | 0.444642 | 1.4:+33065508 | None:intergenic |
CAATCACCCTTGAAAAGGTC+TGG | 0.446807 | 1.4:+33066661 | None:intergenic |
GTAAACAGGCTCCAGAAGCC+TGG | 0.449558 | 1.4:+33065018 | None:intergenic |
ATTAATCTCATTGATTCCCC+TGG | 0.450134 | 1.4:-33066888 | MS.gene43354:CDS |
CCTTGAGTCCCTTCCTCTTG+CGG | 0.451681 | 1.4:+33064717 | None:intergenic |
CCAGAGCCTCTCCATCATCT+TGG | 0.458486 | 1.4:+33066473 | None:intergenic |
TTTGAGACCTTCAACAAGCT+TGG | 0.459038 | 1.4:+33065681 | None:intergenic |
TAAGGTTTCCACAGGTTTGA+AGG | 0.460784 | 1.4:-33065983 | MS.gene43354:CDS |
TGAATCTCTCAAGAGGTTCA+AGG | 0.462319 | 1.4:-33066937 | MS.gene43354:CDS |
AATCACCCAACAAGCACAAC+CGG | 0.462761 | 1.4:-33065450 | MS.gene43354:CDS |
TTGAGACCTTCAACAAGCTT+GGG | 0.463364 | 1.4:+33065682 | None:intergenic |
TACAGCCGGTTGTGCTTGTT+GGG | 0.463966 | 1.4:+33065445 | None:intergenic |
GATGAGAAGTCGACGTGCCC+AGG | 0.465265 | 1.4:+33066870 | None:intergenic |
GTGTTGATGATCTGCTTGAT+AGG | 0.466476 | 1.4:+33066354 | None:intergenic |
TCTGGGGAACACATTGTTGC+TGG | 0.466745 | 1.4:-33065613 | MS.gene43354:CDS |
TTTGTACTATTGAGGAGTCT+GGG | 0.468088 | 1.4:-33065630 | MS.gene43354:CDS |
ATCTTATTAACTGTAAGAAC+AGG | 0.471492 | 1.4:+33066729 | None:intergenic |
GCTTGTCTTCAAACTCAGAA+AGG | 0.471632 | 1.4:+33064681 | None:intergenic |
CTTGTCTTCAAACTCAGAAA+GGG | 0.475137 | 1.4:+33064682 | None:intergenic |
CAAGCTCCTGAGCAAGCTCT+TGG | 0.480687 | 1.4:-33064983 | MS.gene43354:CDS |
CCAGAGAACTGTTATTTGGA+TGG | 0.484696 | 1.4:-33065899 | MS.gene43354:CDS |
CTCCATCAACCTGGAGCTCA+AGG | 0.484716 | 1.4:+33066694 | None:intergenic |
CGGTACCTCTGGGCAGTATG+AGG | 0.486248 | 1.4:+33066159 | None:intergenic |
AAGATCTTAGAACGATTCTT+GGG | 0.487332 | 1.4:+33065349 | None:intergenic |
GGTAACACTGTTGCTTTGGT+TGG | 0.489497 | 1.4:-33065841 | MS.gene43354:CDS |
CAAGCACAACCGGCTGTACA+TGG | 0.494305 | 1.4:-33065440 | MS.gene43354:CDS |
TGTTCTTACAGTTAATAAGA+TGG | 0.496370 | 1.4:-33066727 | MS.gene43354:CDS |
TTTGGCTAAGTCAGATCCTA+TGG | 0.497431 | 1.4:-33065656 | MS.gene43354:CDS |
CAAGATGATGGAGAGGCTCT+GGG | 0.500748 | 1.4:-33066472 | MS.gene43354:CDS |
CGATTCTTGGGATCATCCCT+TGG | 0.503147 | 1.4:+33065361 | None:intergenic |
TATTTGGATGGGAAAGAGAC+AGG | 0.503305 | 1.4:-33065887 | MS.gene43354:CDS |
GACTCTCTAGTCGCTGCTGC+GGG | 0.503640 | 1.4:-33067077 | MS.gene43354:CDS |
AATCCAAAGGACTCAATGAC+AGG | 0.504729 | 1.4:+33064866 | None:intergenic |
CATGGTGGTTGATATGTGTA+AGG | 0.508997 | 1.4:-33065251 | MS.gene43354:CDS |
CAGAGAACTGTTATTTGGAT+GGG | 0.509130 | 1.4:-33065898 | MS.gene43354:CDS |
ATCAACCACCATGTTGGGCC+CGG | 0.509336 | 1.4:+33065261 | None:intergenic |
GGCAGTACTTGCTGGCAACC+AGG | 0.509546 | 1.4:+33066215 | None:intergenic |
GACATCACCTGCAACTTCCT+GGG | 0.511795 | 1.4:+33067046 | None:intergenic |
ATTCTCAATCACCCTTGAAA+AGG | 0.511906 | 1.4:+33066656 | None:intergenic |
GAGAGCTGCAACATCTGGGC+AGG | 0.512622 | 1.4:-33064831 | MS.gene43354:CDS |
CGTTGACGAGTCCAAGATGA+TGG | 0.513608 | 1.4:-33066484 | MS.gene43354:CDS |
TGTGGATAGCATCAGTGTGC+AGG | 0.514904 | 1.4:+33065107 | None:intergenic |
GGCCTATGCTCACAAAGCTA+GGG | 0.518596 | 1.4:-33066302 | MS.gene43354:CDS |
GGTTCAGCTTCGTGCAAGCG+TGG | 0.519811 | 1.4:-33066399 | MS.gene43354:CDS |
CTTGTCCGAACAGTATGGTT+GGG | 0.522890 | 1.4:-33065329 | MS.gene43354:CDS |
TGCGACAAGCTCTTGGAGAA+AGG | 0.523403 | 1.4:-33066758 | MS.gene43354:CDS |
TGACCCTGTTGTGTCATTCA+GGG | 0.524905 | 1.4:-33065512 | MS.gene43354:CDS |
CAAGTGCTCCATCAGTAATA+CGG | 0.527408 | 1.4:+33066829 | None:intergenic |
CATGACCTCAGATCCTTTGG+AGG | 0.527781 | 1.4:-33064774 | MS.gene43354:CDS |
AAAGATCATCATTTCTAGTA+GGG | 0.528380 | 1.4:+33066194 | None:intergenic |
GTCTTGCTTCCATGTACAGC+CGG | 0.529578 | 1.4:+33065431 | None:intergenic |
TTACAGTTAATAAGATGGAC+AGG | 0.531864 | 1.4:-33066722 | MS.gene43354:CDS |
AAAACTTCATAGCTCGGATA+GGG | 0.533180 | 1.4:+33065758 | None:intergenic |
TTTGCCGGTAAGGTTTCCAC+AGG | 0.533577 | 1.4:-33065991 | MS.gene43354:CDS |
GCGTGTTGCTGTTCAGTGCA+AGG | 0.535855 | 1.4:-33065719 | MS.gene43354:CDS |
TGTTGGGCCCGGTGGTCTCA+GGG | 0.536122 | 1.4:+33065272 | None:intergenic |
GAATCTCTCAAGAGGTTCAA+GGG | 0.536243 | 1.4:-33066936 | MS.gene43354:CDS |
CTTGTCCCAACCATACTGTT+CGG | 0.536466 | 1.4:+33065324 | None:intergenic |
ATGCTTTGATGTTGTAAAGT+GGG | 0.537284 | 1.4:+33064894 | None:intergenic |
TTCCAGTGGGCATCAAAAGA+AGG | 0.538881 | 1.4:-33065184 | MS.gene43354:CDS |
CACCATGAAGTCTGATGAGA+AGG | 0.539451 | 1.4:-33066277 | MS.gene43354:CDS |
GTTCAGCTTCGTGCAAGCGT+GGG | 0.540952 | 1.4:-33066398 | MS.gene43354:CDS |
TATGCTTTGATGTTGTAAAG+TGG | 0.540958 | 1.4:+33064893 | None:intergenic |
TTCATAGTAGAGTGAGATAC+CGG | 0.541444 | 1.4:+33066968 | None:intergenic |
CTCCAAAGGATCTGAGGTCA+TGG | 0.541737 | 1.4:+33064775 | None:intergenic |
GAACAGCAACACGCACAACA+GGG | 0.544909 | 1.4:+33065728 | None:intergenic |
GATGCTATCCACAGAGGAGG+TGG | 0.545132 | 1.4:-33065097 | MS.gene43354:CDS |
ACACATATCAACCACCATGT+TGG | 0.545736 | 1.4:+33065255 | None:intergenic |
ATGTTGTAAAGTGGGGTACC+GGG | 0.548869 | 1.4:+33064902 | None:intergenic |
GCTCCTGAGCAAGCTCTTGG+TGG | 0.549556 | 1.4:-33064980 | MS.gene43354:CDS |
AACACGCACAACAGGGGAGA+CGG | 0.549875 | 1.4:+33065735 | None:intergenic |
ATGCCTCCTCTCCATCAACC+TGG | 0.550361 | 1.4:+33066685 | None:intergenic |
CATGGAAGCAAGACCATTGG+AGG | 0.550888 | 1.4:-33065422 | MS.gene43354:CDS |
TCTGCAAGTCCATCCTCCAA+TGG | 0.551260 | 1.4:+33065409 | None:intergenic |
CCCAATGATCAAAGACACAC+TGG | 0.551429 | 1.4:+33064801 | None:intergenic |
CGACTCTCTAGTCGCTGCTG+CGG | 0.551465 | 1.4:-33067078 | MS.gene43354:CDS |
CCGTGGTTGCTGGATTCCAG+TGG | 0.552245 | 1.4:-33065198 | MS.gene43354:CDS |
GAAAACTTCATAGCTCGGAT+AGG | 0.554600 | 1.4:+33065757 | None:intergenic |
ATTTGCATATTGATCGTCAA+GGG | 0.554630 | 1.4:+33066113 | None:intergenic |
GTTATGGTGTATCCAGAGAA+AGG | 0.556062 | 1.4:-33066588 | MS.gene43354:CDS |
ACTTCATAGCTCGGATAGGG+TGG | 0.557461 | 1.4:+33065761 | None:intergenic |
ATGAGAAGTCGACGTGCCCA+GGG | 0.558070 | 1.4:+33066871 | None:intergenic |
TTAATCTCATTGATTCCCCT+GGG | 0.559398 | 1.4:-33066887 | MS.gene43354:CDS |
TTTGAAGAAATGCAGAGGCC+CGG | 0.562287 | 1.4:-33064920 | MS.gene43354:CDS |
TATGGACATCCGCAAGAGGA+AGG | 0.562365 | 1.4:-33064726 | MS.gene43354:CDS |
CACGCTCAGCTTCATCAGCA+CGG | 0.562494 | 1.4:+33067009 | None:intergenic |
ACCATAACATCACCAAGAAG+TGG | 0.563046 | 1.4:+33066603 | None:intergenic |
TAAACAGGCTCCAGAAGCCT+GGG | 0.563138 | 1.4:+33065019 | None:intergenic |
CACAGCTCACAGCCAAACCC+AGG | 0.564223 | 1.4:-33065036 | MS.gene43354:CDS |
GTCTGATGAGAAGGACCTGA+TGG | 0.565161 | 1.4:-33066268 | MS.gene43354:CDS |
TCTTGTCCGAACAGTATGGT+TGG | 0.569952 | 1.4:-33065330 | MS.gene43354:CDS |
AGACGGAAAACTTCATAGCT+CGG | 0.571073 | 1.4:+33065752 | None:intergenic |
CACTTGTATGAATGATCAGA+AGG | 0.573672 | 1.4:-33066334 | MS.gene43354:CDS |
TCAATAGTACAAACAACCAT+AGG | 0.573953 | 1.4:+33065640 | None:intergenic |
CTCTGGGCAGTATGAGGTGA+GGG | 0.574573 | 1.4:+33066165 | None:intergenic |
CCGCAAGAGGAAGGGACTCA+AGG | 0.574628 | 1.4:-33064717 | MS.gene43354:CDS |
CGTGGTTGCTGGATTCCAGT+GGG | 0.577990 | 1.4:-33065197 | MS.gene43354:CDS |
TATTACTGATGGAGCACTTG+TGG | 0.579807 | 1.4:-33066826 | MS.gene43354:CDS |
AGTTGAGAGCTGCAACATCT+GGG | 0.580420 | 1.4:-33064835 | MS.gene43354:CDS |
GGTATTACAATCAAGTCTAC+CGG | 0.580486 | 1.4:-33066987 | MS.gene43354:CDS |
ATACCACCAAGAGCTTGCTC+AGG | 0.582185 | 1.4:+33064977 | None:intergenic |
TGCTGCGGGAATTATTGCCC+AGG | 0.583228 | 1.4:-33067063 | MS.gene43354:CDS |
GAATGAAATCAAGGATTCCG+TGG | 0.583756 | 1.4:-33065215 | MS.gene43354:CDS |
TGCTACATTGACAAATGAGA+AGG | 0.584546 | 1.4:-33065794 | MS.gene43354:CDS |
GCTGCACTCCGTATTACTGA+TGG | 0.586477 | 1.4:-33066837 | MS.gene43354:CDS |
GAACACATTGTTGCTGGTGC+AGG | 0.586596 | 1.4:-33065607 | MS.gene43354:CDS |
ACGCTCAGCTTCATCAGCAC+GGG | 0.587287 | 1.4:+33067010 | None:intergenic |
TGACTGATGAATCTCTCAAG+AGG | 0.587306 | 1.4:-33066944 | MS.gene43354:CDS |
GTACATGGAAGCAAGACCAT+TGG | 0.587944 | 1.4:-33065425 | MS.gene43354:CDS |
ATTCTCAACACGGTACCTCT+GGG | 0.589098 | 1.4:+33066149 | None:intergenic |
ATGGACATCCGCAAGAGGAA+GGG | 0.589685 | 1.4:-33064725 | MS.gene43354:CDS |
GTGGTAGTTGACTGTGTGGA+AGG | 0.592397 | 1.4:-33066807 | MS.gene43354:CDS |
AAACCTTACCGGCAAACACA+CGG | 0.592803 | 1.4:+33065998 | None:intergenic |
TTCCAGCATCTGATAAAGGA+AGG | 0.593214 | 1.4:-33066035 | MS.gene43354:CDS |
CGAACAGTATGGTTGGGACA+AGG | 0.595072 | 1.4:-33065323 | MS.gene43354:CDS |
CTTGCAGAGGCCATTGATGA+GGG | 0.595208 | 1.4:-33065394 | MS.gene43354:CDS |
CATTTGCATATTGATCGTCA+AGG | 0.595538 | 1.4:+33066112 | None:intergenic |
CCAATGATCAAAGACACACT+GGG | 0.598032 | 1.4:+33064802 | None:intergenic |
GATCATTCCTACTGCTAGGA+GGG | 0.598674 | 1.4:-33065071 | MS.gene43354:CDS |
ACTTGCAGAGGCCATTGATG+AGG | 0.601617 | 1.4:-33065395 | MS.gene43354:CDS |
CAGCACGGGTGTCAGTCATA+CGG | 0.601634 | 1.4:+33067024 | None:intergenic |
TGAGCTCCAGGTTGATGGAG+AGG | 0.602836 | 1.4:-33066691 | MS.gene43354:CDS |
AGATCATTCCTACTGCTAGG+AGG | 0.604531 | 1.4:-33065072 | MS.gene43354:CDS |
GAAGCAAGACCATTGGAGGA+TGG | 0.605318 | 1.4:-33065418 | MS.gene43354:CDS |
AATTCTGACCTTCAAACCTG+TGG | 0.606212 | 1.4:+33065975 | None:intergenic |
GCTTGTGATCCAGCCTCCAA+AGG | 0.607119 | 1.4:+33064761 | None:intergenic |
CGTGTTGAGAATTTGTATGA+GGG | 0.607857 | 1.4:-33066138 | MS.gene43354:CDS |
TAGAAGACCCTCCTAGCAGT+AGG | 0.610227 | 1.4:+33065064 | None:intergenic |
GATTTGCAGGATGATTTCAT+GGG | 0.610409 | 1.4:-33065556 | MS.gene43354:CDS |
TCTGATGAGAAGGACCTGAT+GGG | 0.610458 | 1.4:-33066267 | MS.gene43354:CDS |
TTGTACTATTGAGGAGTCTG+GGG | 0.612431 | 1.4:-33065629 | MS.gene43354:CDS |
TGAGACCACCGGGCCCAACA+TGG | 0.612498 | 1.4:-33065269 | MS.gene43354:CDS |
TGCTTTGATGTTGTAAAGTG+GGG | 0.620305 | 1.4:+33064895 | None:intergenic |
GCCTATGCTCACAAAGCTAG+GGG | 0.621099 | 1.4:-33066301 | MS.gene43354:CDS |
TTGCAGGATGATTTCATGGG+TGG | 0.623664 | 1.4:-33065553 | MS.gene43354:CDS |
AGCTGAACCAGTATTCTTGG+TGG | 0.623967 | 1.4:+33066413 | None:intergenic |
TTGTCTTCAAACTCAGAAAG+GGG | 0.624318 | 1.4:+33064683 | None:intergenic |
CTTCATAGCTCGGATAGGGT+GGG | 0.626126 | 1.4:+33065762 | None:intergenic |
AACCACCATGTTGGGCCCGG+TGG | 0.628249 | 1.4:+33065264 | None:intergenic |
TTTGACACATAAAGCATCAG+AGG | 0.628659 | 1.4:+33066063 | None:intergenic |
AAAGAGACAGGAGACTGTTG+AGG | 0.631254 | 1.4:-33065875 | MS.gene43354:CDS |
GGGTTTGGCTGTGAGCTGTG+AGG | 0.632899 | 1.4:+33065039 | None:intergenic |
ACGAGTCCAAGATGATGGAG+AGG | 0.633430 | 1.4:-33066479 | MS.gene43354:CDS |
TCCAGCCTCCAAAGGATCTG+AGG | 0.633775 | 1.4:+33064769 | None:intergenic |
CCACTGGAATCCAGCAACCA+CGG | 0.634741 | 1.4:+33065198 | None:intergenic |
GTCAGATCATTCCTACTGCT+AGG | 0.635280 | 1.4:-33065075 | MS.gene43354:CDS |
TGAAACGTGTTATGCAAACC+TGG | 0.637256 | 1.4:-33066233 | MS.gene43354:CDS |
CGCAGCAGCGACTAGAGAGT+CGG | 0.639168 | 1.4:+33067079 | None:intergenic |
ATCCGAAACTGTGATCCTGA+AGG | 0.640545 | 1.4:-33066087 | MS.gene43354:CDS |
GTCATTGCTCATGTTGACCA+CGG | 0.643542 | 1.4:-33067741 | MS.gene43354:intron |
TGATCTGACCACCTCCTCTG+TGG | 0.643725 | 1.4:+33065089 | None:intergenic |
CCTCTGGGCAGTATGAGGTG+AGG | 0.643865 | 1.4:+33066164 | None:intergenic |
TTGTCGGAAGAAAACATGAG+AGG | 0.644061 | 1.4:-33065157 | MS.gene43354:CDS |
ACCCCTAGCTTTGTGAGCAT+AGG | 0.645184 | 1.4:+33066300 | None:intergenic |
AATCTCTCAAGAGGTTCAAG+GGG | 0.649198 | 1.4:-33066935 | MS.gene43354:CDS |
ATGAGGGCACAATAGGACCA+AGG | 0.652106 | 1.4:-33065378 | MS.gene43354:CDS |
GCTCCAGGTTGATGGAGAGG+AGG | 0.655928 | 1.4:-33066688 | MS.gene43354:CDS |
TTGTTATGGACATCCGCAAG+AGG | 0.656029 | 1.4:-33064730 | MS.gene43354:CDS |
ATTGGAGGATGGACTTGCAG+AGG | 0.656657 | 1.4:-33065407 | MS.gene43354:CDS |
GCACGTCGACTTCTCATCTG+AGG | 0.657062 | 1.4:-33066865 | MS.gene43354:CDS |
TGAGGGCACAATAGGACCAA+GGG | 0.659043 | 1.4:-33065377 | MS.gene43354:CDS |
TTTGCATATTGATCGTCAAG+GGG | 0.659239 | 1.4:+33066114 | None:intergenic |
TCTGGAGCCTGTTTACATGG+TGG | 0.659247 | 1.4:-33065011 | MS.gene43354:CDS |
GTGATTTACTCATCACTGTG+CGG | 0.663418 | 1.4:+33065467 | None:intergenic |
ATGATCAGAAGGATAAGTTG+TGG | 0.670228 | 1.4:-33066323 | MS.gene43354:CDS |
ATCCAAAGGACTCAATGACA+GGG | 0.671225 | 1.4:+33064867 | None:intergenic |
CCTCATACAAATTCTCAACA+CGG | 0.672730 | 1.4:+33066139 | None:intergenic |
GACCACCGGGCCCAACATGG+TGG | 0.678120 | 1.4:-33065266 | MS.gene43354:CDS |
AACAGCAACACGCACAACAG+GGG | 0.681174 | 1.4:+33065729 | None:intergenic |
GTGTTCTGAATCAGAAACGT+GGG | 0.682918 | 1.4:-33064949 | MS.gene43354:CDS |
CAACTGACTAGAAAATCCAA+AGG | 0.684599 | 1.4:+33064853 | None:intergenic |
TTGCATATTGATCGTCAAGG+GGG | 0.688894 | 1.4:+33066115 | None:intergenic |
ACTGATGCTATCCACAGAGG+AGG | 0.690896 | 1.4:-33065100 | MS.gene43354:CDS |
AAGATGATGGAGAGGCTCTG+GGG | 0.692051 | 1.4:-33066471 | MS.gene43354:CDS |
AGTGTTCTGAATCAGAAACG+TGG | 0.702524 | 1.4:-33064950 | MS.gene43354:CDS |
ATGGTGGTTGATATGTGTAA+GGG | 0.703374 | 1.4:-33065250 | MS.gene43354:CDS |
TCTCCCTGAATGACACAACA+GGG | 0.710578 | 1.4:+33065509 | None:intergenic |
CGTGCTGATGAAGCTGAGCG+TGG | 0.710870 | 1.4:-33067008 | MS.gene43354:CDS |
AAAGCAACAGTGTTACCACA+AGG | 0.719194 | 1.4:+33065847 | None:intergenic |
CAAAGGACTCAATGACAGGG+AGG | 0.725112 | 1.4:+33064870 | None:intergenic |
CAATGATCAAAGACACACTG+GGG | 0.733022 | 1.4:+33064803 | None:intergenic |
AATGATCAAAGACACACTGG+GGG | 0.734815 | 1.4:+33064804 | None:intergenic |
TGAGAAGTCGACGTGCCCAG+GGG | 0.741729 | 1.4:+33066872 | None:intergenic |
ACTTGTGGTAGTTGACTGTG+TGG | 0.751182 | 1.4:-33066811 | MS.gene43354:CDS |
ATCTCTCAAGAGGTTCAAGG+GGG | 0.752307 | 1.4:-33066934 | MS.gene43354:CDS |
CCTCACCTCATACTGCCCAG+AGG | 0.753363 | 1.4:-33066164 | MS.gene43354:CDS |
CACACTGATGCTATCCACAG+AGG | 0.760707 | 1.4:-33065103 | MS.gene43354:CDS |
ACTGTTGAGGATGTGCCTTG+TGG | 0.764160 | 1.4:-33065862 | MS.gene43354:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTCTAAATTTGATTAT+AGG | - | chr1.4:33065123-33065142 | MS.gene43354:CDS | 10.0% |
!! | TAAAACCAATTATAATAAAA+TGG | - | chr1.4:33065038-33065057 | MS.gene43354:CDS | 10.0% |
!!! | ATTATAAGAAAAAATGATTT+TGG | - | chr1.4:33064924-33064943 | MS.gene43354:CDS | 10.0% |
!!! | TTATAATTGGTTTTATATAA+AGG | + | chr1.4:33065033-33065052 | None:intergenic | 10.0% |
!! | TTAGTACTTAAAAAATCATG+CGG | + | chr1.4:33065303-33065322 | None:intergenic | 20.0% |
!!! | GCAATCCATTTTATTATAAT+TGG | + | chr1.4:33065046-33065065 | None:intergenic | 20.0% |
! | AAAATGTATGCCTCAAAATT+TGG | - | chr1.4:33066072-33066091 | MS.gene43354:CDS | 25.0% |
! | AAAGAAAAAATTGTTCAGAC+CGG | + | chr1.4:33065451-33065470 | None:intergenic | 25.0% |
! | ATCTTATTAACTGTAAGAAC+AGG | + | chr1.4:33065853-33065872 | None:intergenic | 25.0% |
! | GTATATGTACTATAGTTTAC+CGG | - | chr1.4:33065429-33065448 | MS.gene43354:CDS | 25.0% |
! | TCAGTATTTGAATGAAATCA+AGG | - | chr1.4:33067355-33067374 | MS.gene43354:intron | 25.0% |
! | TGTTCTTACAGTTAATAAGA+TGG | - | chr1.4:33065852-33065871 | MS.gene43354:CDS | 25.0% |
!! | TTTTTCCACAAAAAATCTGT+AGG | - | chr1.4:33065159-33065178 | MS.gene43354:CDS | 25.0% |
!!! | AAAGATCATCATTTCTAGTA+GGG | + | chr1.4:33066388-33066407 | None:intergenic | 25.0% |
!!! | TTTTCTTTGTTTCTATATGC+AGG | - | chr1.4:33065463-33065482 | MS.gene43354:CDS | 25.0% |
AAGATCTTAGAACGATTCTT+GGG | + | chr1.4:33067233-33067252 | None:intergenic | 30.0% | |
ACAAAAAATCTGTAGGAAAC+AGG | - | chr1.4:33065166-33065185 | MS.gene43354:CDS | 30.0% | |
ATGCTTTGATGTTGTAAAGT+GGG | + | chr1.4:33067688-33067707 | None:intergenic | 30.0% | |
ATTTGCATATTGATCGTCAA+GGG | + | chr1.4:33066469-33066488 | None:intergenic | 30.0% | |
TATGCTTTGATGTTGTAAAG+TGG | + | chr1.4:33067689-33067708 | None:intergenic | 30.0% | |
TATGGTTGTTTGTACTATTG+AGG | - | chr1.4:33066941-33066960 | MS.gene43354:CDS | 30.0% | |
TCAATAGTACAAACAACCAT+AGG | + | chr1.4:33066942-33066961 | None:intergenic | 30.0% | |
TGAGAATGCTAATGTGATTA+TGG | - | chr1.4:33065939-33065958 | MS.gene43354:CDS | 30.0% | |
TTACAGTTAATAAGATGGAC+AGG | - | chr1.4:33065857-33065876 | MS.gene43354:CDS | 30.0% | |
!! | GAAAGATCATCATTTCTAGT+AGG | + | chr1.4:33066389-33066408 | None:intergenic | 30.0% |
!!! | AAAGGAAGGTTTTTTGCTTT+TGG | - | chr1.4:33066558-33066577 | MS.gene43354:CDS | 30.0% |
!!! | ATCAAAAGAAGGTGTTTTGT+CGG | - | chr1.4:33067406-33067425 | MS.gene43354:intron | 30.0% |
!!! | TGTTTCCTACAGATTTTTTG+TGG | + | chr1.4:33065167-33065186 | None:intergenic | 30.0% |
AAAACTTCATAGCTCGGATA+GGG | + | chr1.4:33066824-33066843 | None:intergenic | 35.0% | |
ACATATGAAGATCCACTTCT+TGG | - | chr1.4:33065964-33065983 | MS.gene43354:CDS | 35.0% | |
AGATTTGCAGGATGATTTCA+TGG | - | chr1.4:33067022-33067041 | MS.gene43354:CDS | 35.0% | |
AGATTTGTGTTACCATCAAC+AGG | - | chr1.4:33064750-33064769 | MS.gene43354:CDS | 35.0% | |
AGGATCTTGCCAAGAAAATT+TGG | - | chr1.4:33067276-33067295 | MS.gene43354:intron | 35.0% | |
AGGTTTGAAGGTCAGAATTA+TGG | - | chr1.4:33066608-33066627 | MS.gene43354:CDS | 35.0% | |
AGTTCACAGCAATCAAGAAA+GGG | + | chr1.4:33064877-33064896 | None:intergenic | 35.0% | |
ATGATCAGAAGGATAAGTTG+TGG | - | chr1.4:33066256-33066275 | MS.gene43354:CDS | 35.0% | |
ATGATTCCAGCATCTGATAA+AGG | - | chr1.4:33066540-33066559 | MS.gene43354:CDS | 35.0% | |
ATTCTCAATCACCCTTGAAA+AGG | + | chr1.4:33065926-33065945 | None:intergenic | 35.0% | |
CAACTGACTAGAAAATCCAA+AGG | + | chr1.4:33067729-33067748 | None:intergenic | 35.0% | |
CAAGATCTTAGAACGATTCT+TGG | + | chr1.4:33067234-33067253 | None:intergenic | 35.0% | |
CACTTGTATGAATGATCAGA+AGG | - | chr1.4:33066245-33066264 | MS.gene43354:CDS | 35.0% | |
CATTTGCATATTGATCGTCA+AGG | + | chr1.4:33066470-33066489 | None:intergenic | 35.0% | |
CCTCATACAAATTCTCAACA+CGG | + | chr1.4:33066443-33066462 | None:intergenic | 35.0% | |
CGTGTTGAGAATTTGTATGA+GGG | - | chr1.4:33066441-33066460 | MS.gene43354:CDS | 35.0% | |
CTTGTCTTCAAACTCAGAAA+GGG | + | chr1.4:33067900-33067919 | None:intergenic | 35.0% | |
GATCTGTTTGAAAGATTTGC+AGG | - | chr1.4:33067010-33067029 | MS.gene43354:CDS | 35.0% | |
GATTTGCAGGATGATTTCAT+GGG | - | chr1.4:33067023-33067042 | MS.gene43354:CDS | 35.0% | |
GGTATTACAATCAAGTCTAC+CGG | - | chr1.4:33065592-33065611 | MS.gene43354:CDS | 35.0% | |
GGTTTGAAGGTCAGAATTAT+GGG | - | chr1.4:33066609-33066628 | MS.gene43354:CDS | 35.0% | |
TGATGAGTTACGTCGTATTA+TGG | - | chr1.4:33064786-33064805 | MS.gene43354:CDS | 35.0% | |
TGCATAACACGTTTCATCAA+TGG | + | chr1.4:33066342-33066361 | None:intergenic | 35.0% | |
TGCTACATTGACAAATGAGA+AGG | - | chr1.4:33066785-33066804 | MS.gene43354:CDS | 35.0% | |
TGCTTTGATGTTGTAAAGTG+GGG | + | chr1.4:33067687-33067706 | None:intergenic | 35.0% | |
TTCATAGTAGAGTGAGATAC+CGG | + | chr1.4:33065614-33065633 | None:intergenic | 35.0% | |
TTGATCCTGCCACAAAAAAA+TGG | - | chr1.4:33066142-33066161 | MS.gene43354:CDS | 35.0% | |
TTGTCTTCAAACTCAGAAAG+GGG | + | chr1.4:33067899-33067918 | None:intergenic | 35.0% | |
TTTGCATATTGATCGTCAAG+GGG | + | chr1.4:33066468-33066487 | None:intergenic | 35.0% | |
TTTGTACTATTGAGGAGTCT+GGG | - | chr1.4:33066949-33066968 | MS.gene43354:CDS | 35.0% | |
! | ATGGTGGTTGATATGTGTAA+GGG | - | chr1.4:33067329-33067348 | MS.gene43354:intron | 35.0% |
! | CAGAGAACTGTTATTTGGAT+GGG | - | chr1.4:33066681-33066700 | MS.gene43354:CDS | 35.0% |
! | GCCAAAACACCAAATTTTCT+TGG | + | chr1.4:33067288-33067307 | None:intergenic | 35.0% |
! | GGCATACATTTTTGCAAAGT+TGG | + | chr1.4:33066064-33066083 | None:intergenic | 35.0% |
! | TAGAATACACTCTGATTTGC+AGG | + | chr1.4:33065393-33065412 | None:intergenic | 35.0% |
! | TTTGACACATAAAGCATCAG+AGG | + | chr1.4:33066519-33066538 | None:intergenic | 35.0% |
!! | ACGTTTTTGAAGAAATGCAG+AGG | - | chr1.4:33067654-33067673 | MS.gene43354:intron | 35.0% |
!! | ATTAATCTCATTGATTCCCC+TGG | - | chr1.4:33065691-33065710 | MS.gene43354:CDS | 35.0% |
!! | TTAATCTCATTGATTCCCCT+GGG | - | chr1.4:33065692-33065711 | MS.gene43354:CDS | 35.0% |
!!! | ACAGATCTTTTTTCTCTCCA+GGG | + | chr1.4:33066647-33066666 | None:intergenic | 35.0% |
!!! | GCCAAGAAAATTTGGTGTTT+TGG | - | chr1.4:33067284-33067303 | MS.gene43354:intron | 35.0% |
!!! | TACAGATCTTTTTTCTCTCC+AGG | + | chr1.4:33066648-33066667 | None:intergenic | 35.0% |
AAAGCAACAGTGTTACCACA+AGG | + | chr1.4:33066735-33066754 | None:intergenic | 40.0% | |
AAAGCAACTGTTCCTTTCTC+TGG | + | chr1.4:33066006-33066025 | None:intergenic | 40.0% | |
AAATGGACCACCAAGAATAC+TGG | - | chr1.4:33066159-33066178 | MS.gene43354:CDS | 40.0% | |
AACCTTCCTTTATCAGATGC+TGG | + | chr1.4:33066549-33066568 | None:intergenic | 40.0% | |
AAGATCTTGTCCGAACAGTA+TGG | - | chr1.4:33067245-33067264 | MS.gene43354:intron | 40.0% | |
AAGCTCTTGGAGAAAGGATT+AGG | - | chr1.4:33065827-33065846 | MS.gene43354:CDS | 40.0% | |
AATCCAAAGGACTCAATGAC+AGG | + | chr1.4:33067716-33067735 | None:intergenic | 40.0% | |
AATCTCTCAAGAGGTTCAAG+GGG | - | chr1.4:33065644-33065663 | MS.gene43354:CDS | 40.0% | |
AATGATCAAAGACACACTGG+GGG | + | chr1.4:33067778-33067797 | None:intergenic | 40.0% | |
AATTCTGACCTTCAAACCTG+TGG | + | chr1.4:33066607-33066626 | None:intergenic | 40.0% | |
ACACATATCAACCACCATGT+TGG | + | chr1.4:33067327-33067346 | None:intergenic | 40.0% | |
ACCATAACATCACCAAGAAG+TGG | + | chr1.4:33065979-33065998 | None:intergenic | 40.0% | |
AGACGGAAAACTTCATAGCT+CGG | + | chr1.4:33066830-33066849 | None:intergenic | 40.0% | |
ATCCAAAGGACTCAATGACA+GGG | + | chr1.4:33067715-33067734 | None:intergenic | 40.0% | |
CAAGTGCTCCATCAGTAATA+CGG | + | chr1.4:33065753-33065772 | None:intergenic | 40.0% | |
CAATGATCAAAGACACACTG+GGG | + | chr1.4:33067779-33067798 | None:intergenic | 40.0% | |
CACATATCAACCACCATGTT+GGG | + | chr1.4:33067326-33067345 | None:intergenic | 40.0% | |
CAGTTCACAGCAATCAAGAA+AGG | + | chr1.4:33064878-33064897 | None:intergenic | 40.0% | |
CCAATGATCAAAGACACACT+GGG | + | chr1.4:33067780-33067799 | None:intergenic | 40.0% | |
CCAGTGTGTCTTTGATCATT+GGG | - | chr1.4:33067778-33067797 | MS.gene43354:CDS | 40.0% | |
CCATCCAAATAACAGTTCTC+TGG | + | chr1.4:33066683-33066702 | None:intergenic | 40.0% | |
CCGTGTTGAGAATTTGTATG+AGG | - | chr1.4:33066440-33066459 | MS.gene43354:CDS | 40.0% | |
GAAAACTTCATAGCTCGGAT+AGG | + | chr1.4:33066825-33066844 | None:intergenic | 40.0% | |
GAATCTCTCAAGAGGTTCAA+GGG | - | chr1.4:33065643-33065662 | MS.gene43354:CDS | 40.0% | |
GAATGAAATCAAGGATTCCG+TGG | - | chr1.4:33067364-33067383 | MS.gene43354:intron | 40.0% | |
GCTTGTCTTCAAACTCAGAA+AGG | + | chr1.4:33067901-33067920 | None:intergenic | 40.0% | |
GTGATTTACTCATCACTGTG+CGG | + | chr1.4:33067115-33067134 | None:intergenic | 40.0% | |
GTGTCCAGAGAACTGTTATT+TGG | - | chr1.4:33066676-33066695 | MS.gene43354:CDS | 40.0% | |
GTTATGGTGTATCCAGAGAA+AGG | - | chr1.4:33065991-33066010 | MS.gene43354:CDS | 40.0% | |
GTTTGTACTATTGAGGAGTC+TGG | - | chr1.4:33066948-33066967 | MS.gene43354:CDS | 40.0% | |
TAAGGTTTCCACAGGTTTGA+AGG | - | chr1.4:33066596-33066615 | MS.gene43354:CDS | 40.0% | |
TATTTGGATGGGAAAGAGAC+AGG | - | chr1.4:33066692-33066711 | MS.gene43354:CDS | 40.0% | |
TGAAACGTGTTATGCAAACC+TGG | - | chr1.4:33066346-33066365 | MS.gene43354:CDS | 40.0% | |
TGAATCTCTCAAGAGGTTCA+AGG | - | chr1.4:33065642-33065661 | MS.gene43354:CDS | 40.0% | |
TGACTGATGAATCTCTCAAG+AGG | - | chr1.4:33065635-33065654 | MS.gene43354:CDS | 40.0% | |
TGGATTTCCACCATGTAAAC+AGG | + | chr1.4:33067578-33067597 | None:intergenic | 40.0% | |
TGTTGAAGGTCTCAAACGTT+TGG | - | chr1.4:33066905-33066924 | MS.gene43354:CDS | 40.0% | |
TTCCAGCATCTGATAAAGGA+AGG | - | chr1.4:33066544-33066563 | MS.gene43354:CDS | 40.0% | |
TTCTCTCCAGGGACAAAATT+TGG | + | chr1.4:33066636-33066655 | None:intergenic | 40.0% | |
TTGAGACCTTCAACAAGCTT+GGG | + | chr1.4:33066900-33066919 | None:intergenic | 40.0% | |
TTGCATATTGATCGTCAAGG+GGG | + | chr1.4:33066467-33066486 | None:intergenic | 40.0% | |
TTGTACTATTGAGGAGTCTG+GGG | - | chr1.4:33066950-33066969 | MS.gene43354:CDS | 40.0% | |
TTGTCGGAAGAAAACATGAG+AGG | - | chr1.4:33067422-33067441 | MS.gene43354:intron | 40.0% | |
TTTGGCTAAGTCAGATCCTA+TGG | - | chr1.4:33066923-33066942 | MS.gene43354:CDS | 40.0% | |
! | AGTGTTCTGAATCAGAAACG+TGG | - | chr1.4:33067629-33067648 | MS.gene43354:intron | 40.0% |
! | CATGGTGGTTGATATGTGTA+AGG | - | chr1.4:33067328-33067347 | MS.gene43354:intron | 40.0% |
! | CCAGAGAACTGTTATTTGGA+TGG | - | chr1.4:33066680-33066699 | MS.gene43354:CDS | 40.0% |
! | GTGTTCTGAATCAGAAACGT+GGG | - | chr1.4:33067630-33067649 | MS.gene43354:intron | 40.0% |
! | TATTACTGATGGAGCACTTG+TGG | - | chr1.4:33065753-33065772 | MS.gene43354:CDS | 40.0% |
! | TTGTGGTAACACTGTTGCTT+TGG | - | chr1.4:33066734-33066753 | MS.gene43354:CDS | 40.0% |
! | TTTGAGACCTTCAACAAGCT+TGG | + | chr1.4:33066901-33066920 | None:intergenic | 40.0% |
!! | GTGTTGATGATCTGCTTGAT+AGG | + | chr1.4:33066228-33066247 | None:intergenic | 40.0% |
!! | TCCACTTCTTGGTGATGTTA+TGG | - | chr1.4:33065975-33065994 | MS.gene43354:CDS | 40.0% |
!!! | CTTGGTGGTCCATTTTTTTG+TGG | + | chr1.4:33066154-33066173 | None:intergenic | 40.0% |
AAACCTTACCGGCAAACACA+CGG | + | chr1.4:33066584-33066603 | None:intergenic | 45.0% | |
AAAGAGACAGGAGACTGTTG+AGG | - | chr1.4:33066704-33066723 | MS.gene43354:CDS | 45.0% | |
AATCACCCAACAAGCACAAC+CGG | - | chr1.4:33067129-33067148 | MS.gene43354:intron | 45.0% | |
AATTCTCAACACGGTACCTC+TGG | + | chr1.4:33066434-33066453 | None:intergenic | 45.0% | |
ACAGCAATCAAGAAAGGGCT+TGG | + | chr1.4:33064872-33064891 | None:intergenic | 45.0% | |
ACTTGTGGTAGTTGACTGTG+TGG | - | chr1.4:33065768-33065787 | MS.gene43354:CDS | 45.0% | |
AGATCATTCCTACTGCTAGG+AGG | - | chr1.4:33067507-33067526 | MS.gene43354:intron | 45.0% | |
AGCTGAACCAGTATTCTTGG+TGG | + | chr1.4:33066169-33066188 | None:intergenic | 45.0% | |
AGTTGAGAGCTGCAACATCT+GGG | - | chr1.4:33067744-33067763 | MS.gene43354:CDS | 45.0% | |
ATCCGAAACTGTGATCCTGA+AGG | - | chr1.4:33066492-33066511 | MS.gene43354:CDS | 45.0% | |
ATCTCTCAAGAGGTTCAAGG+GGG | - | chr1.4:33065645-33065664 | MS.gene43354:CDS | 45.0% | |
ATTATTGCCCAGGAAGTTGC+AGG | - | chr1.4:33065526-33065545 | MS.gene43354:CDS | 45.0% | |
ATTCTCAACACGGTACCTCT+GGG | + | chr1.4:33066433-33066452 | None:intergenic | 45.0% | |
CAAACCTGTGGAAACCTTAC+CGG | + | chr1.4:33066595-33066614 | None:intergenic | 45.0% | |
CAATCACCCTTGAAAAGGTC+TGG | + | chr1.4:33065921-33065940 | None:intergenic | 45.0% | |
CACCATGAAGTCTGATGAGA+AGG | - | chr1.4:33066302-33066321 | MS.gene43354:CDS | 45.0% | |
CCCAATGATCAAAGACACAC+TGG | + | chr1.4:33067781-33067800 | None:intergenic | 45.0% | |
CCCAGTGTGTCTTTGATCAT+TGG | - | chr1.4:33067777-33067796 | MS.gene43354:CDS | 45.0% | |
CGAAGCTGAACCAGTATTCT+TGG | + | chr1.4:33066172-33066191 | None:intergenic | 45.0% | |
CTGTGAACTTCACCTGTTGA+TGG | + | chr1.4:33064765-33064784 | None:intergenic | 45.0% | |
CTTGTCCCAACCATACTGTT+CGG | + | chr1.4:33067258-33067277 | None:intergenic | 45.0% | |
CTTGTCCGAACAGTATGGTT+GGG | - | chr1.4:33067250-33067269 | MS.gene43354:intron | 45.0% | |
GATCATTCCTACTGCTAGGA+GGG | - | chr1.4:33067508-33067527 | MS.gene43354:intron | 45.0% | |
GATGTTGTAAAGTGGGGTAC+CGG | + | chr1.4:33067681-33067700 | None:intergenic | 45.0% | |
GTACATGGAAGCAAGACCAT+TGG | - | chr1.4:33067154-33067173 | MS.gene43354:intron | 45.0% | |
GTCAGATCATTCCTACTGCT+AGG | - | chr1.4:33067504-33067523 | MS.gene43354:intron | 45.0% | |
GTCATTGCTCATGTTGACCA+CGG | - | chr1.4:33064838-33064857 | MS.gene43354:CDS | 45.0% | |
GTCCTTCAGGATCACAGTTT+CGG | + | chr1.4:33066497-33066516 | None:intergenic | 45.0% | |
GTCCTTCTCATCAGACTTCA+TGG | + | chr1.4:33066307-33066326 | None:intergenic | 45.0% | |
TCATCAATGGCTTACCCATC+AGG | + | chr1.4:33066329-33066348 | None:intergenic | 45.0% | |
TCCTATTGTGCCCTCATCAA+TGG | + | chr1.4:33067198-33067217 | None:intergenic | 45.0% | |
TCTCCCTGAATGACACAACA+GGG | + | chr1.4:33067073-33067092 | None:intergenic | 45.0% | |
TCTGATGAGAAGGACCTGAT+GGG | - | chr1.4:33066312-33066331 | MS.gene43354:CDS | 45.0% | |
TCTTGTCCGAACAGTATGGT+TGG | - | chr1.4:33067249-33067268 | MS.gene43354:intron | 45.0% | |
TTCCAGTGGGCATCAAAAGA+AGG | - | chr1.4:33067395-33067414 | MS.gene43354:intron | 45.0% | |
TTGCAGGATGATTTCATGGG+TGG | - | chr1.4:33067026-33067045 | MS.gene43354:CDS | 45.0% | |
TTGTTATGGACATCCGCAAG+AGG | - | chr1.4:33067849-33067868 | MS.gene43354:intron | 45.0% | |
TTTGAAGAAATGCAGAGGCC+CGG | - | chr1.4:33067659-33067678 | MS.gene43354:intron | 45.0% | |
! | AGGCATACCAGACCTTTTCA+AGG | - | chr1.4:33065911-33065930 | MS.gene43354:CDS | 45.0% |
! | ATGGGACCAAATTTTGTCCC+TGG | - | chr1.4:33066627-33066646 | MS.gene43354:CDS | 45.0% |
! | ATGTTGTAAAGTGGGGTACC+GGG | + | chr1.4:33067680-33067699 | None:intergenic | 45.0% |
! | CTCGTCAACGCCAAATTTTG+AGG | + | chr1.4:33066085-33066104 | None:intergenic | 45.0% |
! | GGCATACCAGACCTTTTCAA+GGG | - | chr1.4:33065912-33065931 | MS.gene43354:CDS | 45.0% |
! | TAAAGCATCAGAGGTCCTTC+AGG | + | chr1.4:33066510-33066529 | None:intergenic | 45.0% |
! | TGACCCTGTTGTGTCATTCA+GGG | - | chr1.4:33067067-33067086 | MS.gene43354:CDS | 45.0% |
!! | ACAAGCTGCACAGCTTGTTA+TGG | - | chr1.4:33067835-33067854 | MS.gene43354:intron | 45.0% |
!! | CACTGTTGCTTTGGTTGGTT+TGG | - | chr1.4:33066743-33066762 | MS.gene43354:CDS | 45.0% |
!! | GATCTTCCCAAGCTTGTTGA+AGG | - | chr1.4:33066891-33066910 | MS.gene43354:CDS | 45.0% |
!! | GGTAACACTGTTGCTTTGGT+TGG | - | chr1.4:33066738-33066757 | MS.gene43354:CDS | 45.0% |
!! | TTCTGCTGGTTTGCATGGTT+GGG | - | chr1.4:33066026-33066045 | MS.gene43354:CDS | 45.0% |
!! | TTTCTGCTGGTTTGCATGGT+TGG | - | chr1.4:33066025-33066044 | MS.gene43354:CDS | 45.0% |
!!! | GCTTTTTCTGCTGGTTTGCA+TGG | - | chr1.4:33066021-33066040 | MS.gene43354:CDS | 45.0% |
!!! | GGAACAGTTGCTTTTTCTGC+TGG | - | chr1.4:33066012-33066031 | MS.gene43354:CDS | 45.0% |
!!! | GTGGTCCATTTTTTTGTGGC+AGG | + | chr1.4:33066150-33066169 | None:intergenic | 45.0% |
AACAGCAACACGCACAACAG+GGG | + | chr1.4:33066853-33066872 | None:intergenic | 50.0% | |
ACTGATGCTATCCACAGAGG+AGG | - | chr1.4:33067479-33067498 | MS.gene43354:intron | 50.0% | |
ACTGTTGAGGATGTGCCTTG+TGG | - | chr1.4:33066717-33066736 | MS.gene43354:CDS | 50.0% | |
ACTTCATAGCTCGGATAGGG+TGG | + | chr1.4:33066821-33066840 | None:intergenic | 50.0% | |
ACTTGCAGAGGCCATTGATG+AGG | - | chr1.4:33067184-33067203 | MS.gene43354:intron | 50.0% | |
ATCAAGGATTCCGTGGTTGC+TGG | - | chr1.4:33067371-33067390 | MS.gene43354:intron | 50.0% | |
ATGGACATCCGCAAGAGGAA+GGG | - | chr1.4:33067854-33067873 | MS.gene43354:intron | 50.0% | |
CAAAGGACTCAATGACAGGG+AGG | + | chr1.4:33067712-33067731 | None:intergenic | 50.0% | |
CACACTGATGCTATCCACAG+AGG | - | chr1.4:33067476-33067495 | MS.gene43354:intron | 50.0% | |
CACCATGACCTCAGATCCTT+TGG | - | chr1.4:33067802-33067821 | MS.gene43354:CDS | 50.0% | |
CAGTTGAGAGCTGCAACATC+TGG | - | chr1.4:33067743-33067762 | MS.gene43354:CDS | 50.0% | |
CATGACCTCAGATCCTTTGG+AGG | - | chr1.4:33067805-33067824 | MS.gene43354:CDS | 50.0% | |
CATGGAAGCAAGACCATTGG+AGG | - | chr1.4:33067157-33067176 | MS.gene43354:intron | 50.0% | |
CGAACAGTATGGTTGGGACA+AGG | - | chr1.4:33067256-33067275 | MS.gene43354:intron | 50.0% | |
CGATTCTTGGGATCATCCCT+TGG | + | chr1.4:33067221-33067240 | None:intergenic | 50.0% | |
CGTTGACGAGTCCAAGATGA+TGG | - | chr1.4:33066095-33066114 | MS.gene43354:CDS | 50.0% | |
CTCCCTGTCATTGAGTCCTT+TGG | - | chr1.4:33067710-33067729 | MS.gene43354:intron | 50.0% | |
CTTCATAGCTCGGATAGGGT+GGG | + | chr1.4:33066820-33066839 | None:intergenic | 50.0% | |
CTTGCAGAGGCCATTGATGA+GGG | - | chr1.4:33067185-33067204 | MS.gene43354:intron | 50.0% | |
GAACACATTGTTGCTGGTGC+AGG | - | chr1.4:33066972-33066991 | MS.gene43354:CDS | 50.0% | |
GAACAGCAACACGCACAACA+GGG | + | chr1.4:33066854-33066873 | None:intergenic | 50.0% | |
GAAGCAAGACCATTGGAGGA+TGG | - | chr1.4:33067161-33067180 | MS.gene43354:intron | 50.0% | |
GACATCACCTGCAACTTCCT+GGG | + | chr1.4:33065536-33065555 | None:intergenic | 50.0% | |
GCCTATGCTCACAAAGCTAG+GGG | - | chr1.4:33066278-33066297 | MS.gene43354:CDS | 50.0% | |
GCTGCACTCCGTATTACTGA+TGG | - | chr1.4:33065742-33065761 | MS.gene43354:CDS | 50.0% | |
GGCCTATGCTCACAAAGCTA+GGG | - | chr1.4:33066277-33066296 | MS.gene43354:CDS | 50.0% | |
GTCGCAGCACAGTTTCAGTT+TGG | + | chr1.4:33065807-33065826 | None:intergenic | 50.0% | |
GTCTCCCTGAATGACACAAC+AGG | + | chr1.4:33067074-33067093 | None:intergenic | 50.0% | |
GTCTGATGAGAAGGACCTGA+TGG | - | chr1.4:33066311-33066330 | MS.gene43354:CDS | 50.0% | |
GTCTTGCTTCCATGTACAGC+CGG | + | chr1.4:33067151-33067170 | None:intergenic | 50.0% | |
GTGGTAGTTGACTGTGTGGA+AGG | - | chr1.4:33065772-33065791 | MS.gene43354:CDS | 50.0% | |
TAAACAGGCTCCAGAAGCCT+GGG | + | chr1.4:33067563-33067582 | None:intergenic | 50.0% | |
TACAGCCGGTTGTGCTTGTT+GGG | + | chr1.4:33067137-33067156 | None:intergenic | 50.0% | |
TAGAAGACCCTCCTAGCAGT+AGG | + | chr1.4:33067518-33067537 | None:intergenic | 50.0% | |
TATGGACATCCGCAAGAGGA+AGG | - | chr1.4:33067853-33067872 | MS.gene43354:intron | 50.0% | |
TCTAGTAGGGCAGTACTTGC+TGG | + | chr1.4:33066375-33066394 | None:intergenic | 50.0% | |
TCTGCAAGTCCATCCTCCAA+TGG | + | chr1.4:33067173-33067192 | None:intergenic | 50.0% | |
TCTGGGGAACACATTGTTGC+TGG | - | chr1.4:33066966-33066985 | MS.gene43354:CDS | 50.0% | |
TGAACAGCAACACGCACAAC+AGG | + | chr1.4:33066855-33066874 | None:intergenic | 50.0% | |
TGCGACAAGCTCTTGGAGAA+AGG | - | chr1.4:33065821-33065840 | MS.gene43354:CDS | 50.0% | |
TGCTCATGTTGACCACGGTA+TGG | - | chr1.4:33064843-33064862 | MS.gene43354:CDS | 50.0% | |
TGGCCTATGCTCACAAAGCT+AGG | - | chr1.4:33066276-33066295 | MS.gene43354:CDS | 50.0% | |
TGTGGATAGCATCAGTGTGC+AGG | + | chr1.4:33067475-33067494 | None:intergenic | 50.0% | |
TTTGCCGGTAAGGTTTCCAC+AGG | - | chr1.4:33066588-33066607 | MS.gene43354:CDS | 50.0% | |
! | ATACCACCAAGAGCTTGCTC+AGG | + | chr1.4:33067605-33067624 | None:intergenic | 50.0% |
! | ATGAGGGCACAATAGGACCA+AGG | - | chr1.4:33067201-33067220 | MS.gene43354:intron | 50.0% |
! | ATTGGAGGATGGACTTGCAG+AGG | - | chr1.4:33067172-33067191 | MS.gene43354:intron | 50.0% |
! | CACCTTCTTTTGATGCCCAC+TGG | + | chr1.4:33067400-33067419 | None:intergenic | 50.0% |
! | CTCCAAAGGATCTGAGGTCA+TGG | + | chr1.4:33067807-33067826 | None:intergenic | 50.0% |
! | CTGACCCTGTTGTGTCATTC+AGG | - | chr1.4:33067066-33067085 | MS.gene43354:CDS | 50.0% |
! | GCCATTGATGAGGGCACAAT+AGG | - | chr1.4:33067194-33067213 | MS.gene43354:intron | 50.0% |
! | TCTGGAGCCTGTTTACATGG+TGG | - | chr1.4:33067568-33067587 | MS.gene43354:intron | 50.0% |
! | TGAGGGCACAATAGGACCAA+GGG | - | chr1.4:33067202-33067221 | MS.gene43354:intron | 50.0% |
! | TTCCTTGAGCTCCAGGTTGA+TGG | - | chr1.4:33065883-33065902 | MS.gene43354:CDS | 50.0% |
!! | AAGATGATGGAGAGGCTCTG+GGG | - | chr1.4:33066108-33066127 | MS.gene43354:CDS | 50.0% |
!! | ACCCCTAGCTTTGTGAGCAT+AGG | + | chr1.4:33066282-33066301 | None:intergenic | 50.0% |
!! | ACGAGTCCAAGATGATGGAG+AGG | - | chr1.4:33066100-33066119 | MS.gene43354:CDS | 50.0% |
!! | CAAGATGATGGAGAGGCTCT+GGG | - | chr1.4:33066107-33066126 | MS.gene43354:CDS | 50.0% |
!! | GCTTCTGGAGCCTGTTTACA+TGG | - | chr1.4:33067565-33067584 | MS.gene43354:intron | 50.0% |
AACACGCACAACAGGGGAGA+CGG | + | chr1.4:33066847-33066866 | None:intergenic | 55.0% | |
ACGCTCAGCTTCATCAGCAC+GGG | + | chr1.4:33065572-33065591 | None:intergenic | 55.0% | |
ACTGTGCTGCGACAAGCTCT+TGG | - | chr1.4:33065814-33065833 | MS.gene43354:CDS | 55.0% | |
ATCAACCACCATGTTGGGCC+CGG | + | chr1.4:33067321-33067340 | None:intergenic | 55.0% | |
ATGAGAAGTCGACGTGCCCA+GGG | + | chr1.4:33065711-33065730 | None:intergenic | 55.0% | |
ATGCCTCCTCTCCATCAACC+TGG | + | chr1.4:33065897-33065916 | None:intergenic | 55.0% | |
CAAGCACAACCGGCTGTACA+TGG | - | chr1.4:33067139-33067158 | MS.gene43354:intron | 55.0% | |
CAAGCTCCTGAGCAAGCTCT+TGG | - | chr1.4:33067596-33067615 | MS.gene43354:intron | 55.0% | |
CACGCTCAGCTTCATCAGCA+CGG | + | chr1.4:33065573-33065592 | None:intergenic | 55.0% | |
CAGCACGGGTGTCAGTCATA+CGG | + | chr1.4:33065558-33065577 | None:intergenic | 55.0% | |
CCACTGGAATCCAGCAACCA+CGG | + | chr1.4:33067384-33067403 | None:intergenic | 55.0% | |
CCAGAGCCTCTCCATCATCT+TGG | + | chr1.4:33066109-33066128 | None:intergenic | 55.0% | |
CCTTGAGTCCCTTCCTCTTG+CGG | + | chr1.4:33067865-33067884 | None:intergenic | 55.0% | |
CGTGGTTGCTGGATTCCAGT+GGG | - | chr1.4:33067382-33067401 | MS.gene43354:intron | 55.0% | |
CTCCATCAACCTGGAGCTCA+AGG | + | chr1.4:33065888-33065907 | None:intergenic | 55.0% | |
CTCTGGGCAGTATGAGGTGA+GGG | + | chr1.4:33066417-33066436 | None:intergenic | 55.0% | |
GATGCTATCCACAGAGGAGG+TGG | - | chr1.4:33067482-33067501 | MS.gene43354:intron | 55.0% | |
GCTTGTGATCCAGCCTCCAA+AGG | + | chr1.4:33067821-33067840 | None:intergenic | 55.0% | |
GGACATCACCTGCAACTTCC+TGG | + | chr1.4:33065537-33065556 | None:intergenic | 55.0% | |
GTAAACAGGCTCCAGAAGCC+TGG | + | chr1.4:33067564-33067583 | None:intergenic | 55.0% | |
GTACAGCCGGTTGTGCTTGT+TGG | + | chr1.4:33067138-33067157 | None:intergenic | 55.0% | |
GTTCAGCTTCGTGCAAGCGT+GGG | - | chr1.4:33066181-33066200 | MS.gene43354:CDS | 55.0% | |
TCCAGCCTCCAAAGGATCTG+AGG | + | chr1.4:33067813-33067832 | None:intergenic | 55.0% | |
TGATCTGACCACCTCCTCTG+TGG | + | chr1.4:33067493-33067512 | None:intergenic | 55.0% | |
TGCTGCGGGAATTATTGCCC+AGG | - | chr1.4:33065516-33065535 | MS.gene43354:CDS | 55.0% | |
! | ACCTCAGATCCTTTGGAGGC+TGG | - | chr1.4:33067809-33067828 | MS.gene43354:CDS | 55.0% |
! | AGGTTCAAGGGGGAGCGTAA+TGG | - | chr1.4:33065655-33065674 | MS.gene43354:CDS | 55.0% |
! | CAAGAGCTTGCTCAGGAGCT+TGG | + | chr1.4:33067598-33067617 | None:intergenic | 55.0% |
! | GCGTGTTGCTGTTCAGTGCA+AGG | - | chr1.4:33066860-33066879 | MS.gene43354:CDS | 55.0% |
! | GCTTTTGGCCGTGTGTTTGC+CGG | - | chr1.4:33066573-33066592 | MS.gene43354:CDS | 55.0% |
!! | CCAAGATGATGGAGAGGCTC+TGG | - | chr1.4:33066106-33066125 | MS.gene43354:CDS | 55.0% |
!! | GCACGTCGACTTCTCATCTG+AGG | - | chr1.4:33065714-33065733 | MS.gene43354:CDS | 55.0% |
!! | TGAGCTCCAGGTTGATGGAG+AGG | - | chr1.4:33065888-33065907 | MS.gene43354:CDS | 55.0% |
!!! | TGTTTTGGCCCTGAGACCAC+CGG | - | chr1.4:33067299-33067318 | MS.gene43354:intron | 55.0% |
AGGCTCCAGAAGCCTGGGTT+TGG | + | chr1.4:33067558-33067577 | None:intergenic | 60.0% | |
AGGGCTTGGAGTCCATACCG+TGG | + | chr1.4:33064858-33064877 | None:intergenic | 60.0% | |
CACAGCCAAACCCAGGCTTC+TGG | - | chr1.4:33067550-33067569 | MS.gene43354:intron | 60.0% | |
CACAGCTCACAGCCAAACCC+AGG | - | chr1.4:33067543-33067562 | MS.gene43354:intron | 60.0% | |
CAGGTGCTTCCTTGAGCTCC+AGG | - | chr1.4:33065876-33065895 | MS.gene43354:CDS | 60.0% | |
CCGCAAGAGGAAGGGACTCA+AGG | - | chr1.4:33067862-33067881 | MS.gene43354:intron | 60.0% | |
CCGTGGTTGCTGGATTCCAG+TGG | - | chr1.4:33067381-33067400 | MS.gene43354:intron | 60.0% | |
CCTCACCTCATACTGCCCAG+AGG | - | chr1.4:33066415-33066434 | MS.gene43354:CDS | 60.0% | |
CCTCTGGGCAGTATGAGGTG+AGG | + | chr1.4:33066418-33066437 | None:intergenic | 60.0% | |
CGACTCTCTAGTCGCTGCTG+CGG | - | chr1.4:33065501-33065520 | MS.gene43354:CDS | 60.0% | |
CGCAGCAGCGACTAGAGAGT+CGG | + | chr1.4:33065503-33065522 | None:intergenic | 60.0% | |
CGGTACCTCTGGGCAGTATG+AGG | + | chr1.4:33066423-33066442 | None:intergenic | 60.0% | |
GACTCTCTAGTCGCTGCTGC+GGG | - | chr1.4:33065502-33065521 | MS.gene43354:CDS | 60.0% | |
GAGAGCTGCAACATCTGGGC+AGG | - | chr1.4:33067748-33067767 | MS.gene43354:CDS | 60.0% | |
GATGAGAAGTCGACGTGCCC+AGG | + | chr1.4:33065712-33065731 | None:intergenic | 60.0% | |
GCTCCTGAGCAAGCTCTTGG+TGG | - | chr1.4:33067599-33067618 | MS.gene43354:intron | 60.0% | |
GGGTTTGGCTGTGAGCTGTG+AGG | + | chr1.4:33067543-33067562 | None:intergenic | 60.0% | |
GGTTCAGCTTCGTGCAAGCG+TGG | - | chr1.4:33066180-33066199 | MS.gene43354:CDS | 60.0% | |
TGAGAAGTCGACGTGCCCAG+GGG | + | chr1.4:33065710-33065729 | None:intergenic | 60.0% | |
TGGCCGTGTGTTTGCCGGTA+AGG | - | chr1.4:33066578-33066597 | MS.gene43354:CDS | 60.0% | |
! | CGTGCTGATGAAGCTGAGCG+TGG | - | chr1.4:33065571-33065590 | MS.gene43354:CDS | 60.0% |
! | GGCAGTACTTGCTGGCAACC+AGG | + | chr1.4:33066367-33066386 | None:intergenic | 60.0% |
!! | GCTCCAGGTTGATGGAGAGG+AGG | - | chr1.4:33065891-33065910 | MS.gene43354:CDS | 60.0% |
!! | GTTTTGGCCCTGAGACCACC+GGG | - | chr1.4:33067300-33067319 | MS.gene43354:intron | 60.0% |
AACCACCATGTTGGGCCCGG+TGG | + | chr1.4:33067318-33067337 | None:intergenic | 65.0% | |
ATGTTGGGCCCGGTGGTCTC+AGG | + | chr1.4:33067311-33067330 | None:intergenic | 65.0% | |
TGAGACCACCGGGCCCAACA+TGG | - | chr1.4:33067310-33067329 | MS.gene43354:intron | 65.0% | |
TGTTGGGCCCGGTGGTCTCA+GGG | + | chr1.4:33067310-33067329 | None:intergenic | 65.0% | |
GACCACCGGGCCCAACATGG+TGG | - | chr1.4:33067313-33067332 | MS.gene43354:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 33064676 | 33067925 | 33064676 | ID=MS.gene43354 |
chr1.4 | mRNA | 33064676 | 33067925 | 33064676 | ID=MS.gene43354.t1;Parent=MS.gene43354 |
chr1.4 | exon | 33067923 | 33067925 | 33067923 | ID=MS.gene43354.t1.exon1;Parent=MS.gene43354.t1 |
chr1.4 | CDS | 33067923 | 33067925 | 33067923 | ID=cds.MS.gene43354.t1;Parent=MS.gene43354.t1 |
chr1.4 | exon | 33067742 | 33067829 | 33067742 | ID=MS.gene43354.t1.exon2;Parent=MS.gene43354.t1 |
chr1.4 | CDS | 33067742 | 33067829 | 33067742 | ID=cds.MS.gene43354.t1;Parent=MS.gene43354.t1 |
chr1.4 | exon | 33064676 | 33067116 | 33064676 | ID=MS.gene43354.t1.exon3;Parent=MS.gene43354.t1 |
chr1.4 | CDS | 33064676 | 33067116 | 33064676 | ID=cds.MS.gene43354.t1;Parent=MS.gene43354.t1 |
Gene Sequence |
Protein sequence |