Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44004.t1 | XP_013468981.1 | 98.9 | 355 | 3 | 1 | 1 | 354 | 1 | 355 | 9.80E-148 | 533.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44004.t1 | O22768 | 79.5 | 166 | 32 | 2 | 188 | 351 | 142 | 307 | 4.9e-63 | 243.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44004.t1 | A0A072VNM4 | 98.9 | 355 | 3 | 1 | 1 | 354 | 1 | 355 | 7.1e-148 | 533.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene44004.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049609 | MS.gene44004 | -0.825105 | 5.62E-54 | -1.69E-46 |
| MS.gene050163 | MS.gene44004 | -0.80451 | 2.09E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene44004 | -0.822062 | 2.90E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene44004 | -0.812669 | 3.77E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene44004 | -0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene052670 | MS.gene44004 | -0.805684 | 1.19E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene44004 | -0.823498 | 1.34E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene44004 | -0.804505 | 2.09E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene44004 | -0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene44004 | -0.816513 | 5.32E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene44004 | -0.808874 | 2.50E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene44004 | -0.822866 | 1.88E-53 | -1.69E-46 |
| MS.gene056611 | MS.gene44004 | -0.811629 | 6.36E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene44004 | -0.8017 | 7.96E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene44004 | -0.82275 | 2.00E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene44004 | -0.800708 | 1.27E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene44004 | -0.810828 | 9.49E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene44004 | -0.821153 | 4.70E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44004.t1 | MTR_1g080890 | 97.753 | 356 | 5 | 3 | 1 | 354 | 1 | 355 | 0.0 | 702 |
| MS.gene44004.t1 | MTR_1g070870 | 79.775 | 178 | 36 | 0 | 173 | 350 | 101 | 278 | 2.18e-89 | 270 |
| MS.gene44004.t1 | MTR_1g070870 | 79.775 | 178 | 36 | 0 | 173 | 350 | 104 | 281 | 2.93e-89 | 270 |
| MS.gene44004.t1 | MTR_4g131160 | 64.130 | 184 | 52 | 4 | 165 | 334 | 163 | 346 | 9.39e-62 | 203 |
| MS.gene44004.t1 | MTR_4g131160 | 64.130 | 184 | 52 | 4 | 165 | 334 | 166 | 349 | 1.25e-61 | 202 |
| MS.gene44004.t1 | MTR_7g053410 | 64.000 | 75 | 26 | 1 | 183 | 256 | 308 | 382 | 2.73e-22 | 98.2 |
| MS.gene44004.t1 | MTR_7g053410 | 64.000 | 75 | 26 | 1 | 183 | 256 | 308 | 382 | 2.88e-22 | 98.2 |
| MS.gene44004.t1 | MTR_8g012290 | 64.000 | 75 | 26 | 1 | 183 | 256 | 282 | 356 | 6.39e-22 | 97.1 |
| MS.gene44004.t1 | MTR_8g012290 | 64.000 | 75 | 26 | 1 | 183 | 256 | 282 | 356 | 6.55e-22 | 97.1 |
| MS.gene44004.t1 | MTR_3g498825 | 48.544 | 103 | 52 | 1 | 181 | 282 | 136 | 238 | 7.56e-22 | 95.1 |
| MS.gene44004.t1 | MTR_3g116770 | 69.697 | 66 | 19 | 1 | 192 | 256 | 191 | 256 | 2.64e-21 | 94.4 |
| MS.gene44004.t1 | MTR_3g116770 | 69.697 | 66 | 19 | 1 | 192 | 256 | 191 | 256 | 2.80e-21 | 94.4 |
| MS.gene44004.t1 | MTR_1g017350 | 68.182 | 66 | 20 | 1 | 192 | 256 | 260 | 325 | 3.80e-21 | 94.4 |
| MS.gene44004.t1 | MTR_1g017350 | 68.182 | 66 | 20 | 1 | 192 | 256 | 260 | 325 | 4.03e-21 | 94.0 |
| MS.gene44004.t1 | MTR_1g017350 | 68.182 | 66 | 20 | 1 | 192 | 256 | 260 | 325 | 4.54e-21 | 94.0 |
| MS.gene44004.t1 | MTR_1g017350 | 68.182 | 66 | 20 | 1 | 192 | 256 | 260 | 325 | 5.35e-21 | 94.0 |
| MS.gene44004.t1 | MTR_4g070320 | 68.182 | 66 | 20 | 1 | 192 | 256 | 143 | 208 | 1.62e-20 | 91.7 |
| MS.gene44004.t1 | MTR_8g065740 | 68.182 | 66 | 20 | 1 | 192 | 256 | 305 | 370 | 2.47e-20 | 92.0 |
| MS.gene44004.t1 | MTR_5g048860 | 68.182 | 66 | 20 | 1 | 192 | 256 | 365 | 430 | 4.23e-20 | 91.7 |
| MS.gene44004.t1 | MTR_8g062240 | 65.152 | 66 | 22 | 1 | 192 | 256 | 151 | 216 | 5.33e-20 | 89.0 |
| MS.gene44004.t1 | MTR_5g037250 | 60.000 | 75 | 29 | 1 | 183 | 256 | 103 | 177 | 6.56e-20 | 87.8 |
| MS.gene44004.t1 | MTR_8g099880 | 65.152 | 66 | 22 | 1 | 192 | 256 | 145 | 210 | 1.82e-19 | 88.2 |
| MS.gene44004.t1 | MTR_1g069155 | 49.367 | 79 | 36 | 1 | 194 | 272 | 319 | 393 | 9.99e-18 | 84.7 |
| MS.gene44004.t1 | MTR_7g099540 | 50.000 | 78 | 35 | 1 | 195 | 272 | 255 | 328 | 1.31e-17 | 84.0 |
| MS.gene44004.t1 | MTR_1g052470 | 50.549 | 91 | 39 | 3 | 174 | 258 | 275 | 365 | 1.34e-17 | 83.6 |
| MS.gene44004.t1 | MTR_4g033295 | 58.462 | 65 | 26 | 1 | 191 | 254 | 117 | 181 | 2.31e-17 | 79.3 |
| MS.gene44004.t1 | MTR_4g033295 | 59.091 | 66 | 26 | 1 | 191 | 255 | 117 | 182 | 3.88e-17 | 79.0 |
| MS.gene44004.t1 | MTR_1g059270 | 39.200 | 125 | 68 | 4 | 192 | 310 | 160 | 282 | 4.75e-17 | 81.3 |
| MS.gene44004.t1 | MTR_1g084980 | 52.857 | 70 | 29 | 1 | 194 | 263 | 464 | 529 | 7.07e-17 | 82.4 |
| MS.gene44004.t1 | MTR_5g005110 | 58.462 | 65 | 27 | 0 | 191 | 255 | 223 | 287 | 7.38e-17 | 80.9 |
| MS.gene44004.t1 | MTR_1g018090 | 56.923 | 65 | 28 | 0 | 191 | 255 | 273 | 337 | 1.34e-16 | 80.5 |
| MS.gene44004.t1 | MTR_1g019240 | 47.059 | 85 | 38 | 2 | 176 | 260 | 75 | 152 | 1.45e-16 | 79.0 |
| MS.gene44004.t1 | MTR_3g103030 | 46.341 | 82 | 44 | 0 | 191 | 272 | 228 | 309 | 1.69e-16 | 79.7 |
| MS.gene44004.t1 | MTR_1g059270 | 59.091 | 66 | 26 | 1 | 192 | 256 | 160 | 225 | 2.53e-16 | 78.2 |
| MS.gene44004.t1 | MTR_7g099540 | 50.000 | 70 | 35 | 0 | 195 | 264 | 255 | 324 | 2.83e-16 | 80.1 |
| MS.gene44004.t1 | MTR_7g092510 | 60.606 | 66 | 25 | 1 | 192 | 256 | 173 | 238 | 3.43e-16 | 79.0 |
| MS.gene44004.t1 | MTR_7g092540 | 50.667 | 75 | 36 | 1 | 185 | 258 | 236 | 310 | 7.46e-16 | 77.8 |
| MS.gene44004.t1 | MTR_7g092540 | 53.521 | 71 | 32 | 1 | 185 | 254 | 236 | 306 | 7.62e-16 | 77.4 |
| MS.gene44004.t1 | MTR_3g449770 | 53.968 | 63 | 29 | 0 | 194 | 256 | 311 | 373 | 8.59e-16 | 79.0 |
| MS.gene44004.t1 | MTR_2g098310 | 56.061 | 66 | 28 | 1 | 191 | 255 | 331 | 396 | 1.07e-15 | 78.2 |
| MS.gene44004.t1 | MTR_8g036235 | 52.174 | 69 | 32 | 1 | 191 | 258 | 315 | 383 | 3.85e-15 | 76.3 |
| MS.gene44004.t1 | MTR_1g072530 | 32.847 | 137 | 80 | 1 | 198 | 334 | 190 | 314 | 4.02e-15 | 75.9 |
| MS.gene44004.t1 | MTR_4g065870 | 53.623 | 69 | 31 | 1 | 191 | 258 | 354 | 422 | 6.38e-15 | 75.9 |
| MS.gene44004.t1 | MTR_2g098310 | 55.385 | 65 | 28 | 1 | 191 | 254 | 331 | 395 | 7.65e-15 | 75.5 |
| MS.gene44004.t1 | MTR_1g106470 | 45.783 | 83 | 45 | 0 | 184 | 266 | 188 | 270 | 8.94e-15 | 74.3 |
| MS.gene44004.t1 | MTR_7g110810 | 51.786 | 56 | 27 | 0 | 203 | 258 | 213 | 268 | 9.91e-15 | 75.1 |
| MS.gene44004.t1 | MTR_1g106460 | 48.529 | 68 | 35 | 0 | 188 | 255 | 234 | 301 | 9.97e-15 | 74.7 |
| MS.gene44004.t1 | MTR_5g079500 | 57.895 | 57 | 24 | 0 | 199 | 255 | 225 | 281 | 1.24e-14 | 73.9 |
| MS.gene44004.t1 | MTR_3g101810 | 46.250 | 80 | 42 | 1 | 185 | 264 | 164 | 242 | 1.25e-14 | 73.6 |
| MS.gene44004.t1 | MTR_5g017040 | 59.259 | 54 | 22 | 0 | 203 | 256 | 116 | 169 | 1.29e-14 | 74.3 |
| MS.gene44004.t1 | MTR_6g084120 | 56.923 | 65 | 25 | 2 | 192 | 255 | 155 | 217 | 5.81e-14 | 71.6 |
| MS.gene44004.t1 | MTR_3g028520 | 47.727 | 88 | 38 | 3 | 176 | 255 | 299 | 386 | 6.19e-14 | 72.8 |
| MS.gene44004.t1 | MTR_3g027650 | 47.727 | 88 | 38 | 3 | 176 | 255 | 299 | 386 | 6.19e-14 | 72.8 |
| MS.gene44004.t1 | MTR_7g111320 | 51.429 | 70 | 31 | 1 | 194 | 263 | 434 | 500 | 6.38e-14 | 73.2 |
| MS.gene44004.t1 | MTR_8g093500 | 50.000 | 70 | 35 | 0 | 185 | 254 | 107 | 176 | 9.00e-14 | 71.2 |
| MS.gene44004.t1 | MTR_4g065870 | 53.968 | 63 | 28 | 1 | 191 | 252 | 354 | 416 | 1.71e-13 | 71.6 |
| MS.gene44004.t1 | MTR_3g027650 | 48.837 | 86 | 36 | 3 | 176 | 253 | 299 | 384 | 2.43e-13 | 70.9 |
| MS.gene44004.t1 | MTR_1g072530 | 32.540 | 126 | 73 | 1 | 198 | 323 | 190 | 303 | 4.82e-12 | 66.2 |
| MS.gene44004.t1 | MTR_1g106480 | 48.485 | 66 | 34 | 0 | 191 | 256 | 68 | 133 | 9.86e-12 | 62.8 |
| MS.gene44004.t1 | MTR_1g116790 | 50.769 | 65 | 31 | 1 | 191 | 254 | 264 | 328 | 1.06e-11 | 65.9 |
| MS.gene44004.t1 | MTR_7g069590 | 49.057 | 53 | 27 | 0 | 199 | 251 | 33 | 85 | 5.28e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44004.t1 | AT4G02590 | 76.374 | 182 | 38 | 3 | 172 | 351 | 66 | 244 | 7.77e-80 | 244 |
| MS.gene44004.t1 | AT4G02590 | 76.374 | 182 | 38 | 3 | 172 | 351 | 129 | 307 | 2.24e-79 | 245 |
| MS.gene44004.t1 | AT4G02590 | 76.374 | 182 | 38 | 3 | 172 | 351 | 129 | 307 | 2.24e-79 | 245 |
| MS.gene44004.t1 | AT1G03040 | 47.011 | 368 | 81 | 12 | 11 | 351 | 19 | 299 | 1.06e-74 | 233 |
| MS.gene44004.t1 | AT1G03040 | 73.481 | 181 | 37 | 4 | 176 | 351 | 120 | 294 | 1.18e-73 | 230 |
| MS.gene44004.t1 | AT1G03040 | 43.766 | 393 | 88 | 11 | 11 | 351 | 19 | 330 | 6.96e-71 | 224 |
| MS.gene44004.t1 | AT2G24260 | 67.974 | 153 | 44 | 2 | 185 | 334 | 28 | 178 | 8.55e-62 | 198 |
| MS.gene44004.t1 | AT4G30980 | 60.947 | 169 | 56 | 2 | 166 | 334 | 104 | 262 | 3.68e-60 | 196 |
| MS.gene44004.t1 | AT2G24260 | 67.974 | 153 | 44 | 2 | 185 | 334 | 131 | 281 | 6.79e-60 | 196 |
| MS.gene44004.t1 | AT4G30980 | 60.947 | 169 | 56 | 2 | 166 | 334 | 152 | 310 | 7.24e-60 | 197 |
| MS.gene44004.t1 | AT5G58010 | 64.286 | 154 | 47 | 1 | 189 | 334 | 96 | 249 | 8.22e-59 | 192 |
| MS.gene44004.t1 | AT5G48560 | 51.376 | 109 | 48 | 2 | 175 | 282 | 284 | 388 | 3.27e-23 | 100 |
| MS.gene44004.t1 | AT5G48560 | 51.376 | 109 | 48 | 2 | 175 | 282 | 284 | 388 | 3.69e-23 | 100 |
| MS.gene44004.t1 | AT5G50915 | 50.980 | 102 | 39 | 2 | 184 | 284 | 128 | 219 | 1.47e-22 | 95.9 |
| MS.gene44004.t1 | AT5G50915 | 50.980 | 102 | 39 | 2 | 184 | 284 | 128 | 219 | 1.47e-22 | 95.9 |
| MS.gene44004.t1 | AT5G50915 | 50.980 | 102 | 39 | 2 | 184 | 284 | 128 | 219 | 1.61e-22 | 96.3 |
| MS.gene44004.t1 | AT5G50915 | 50.980 | 102 | 39 | 2 | 184 | 284 | 128 | 219 | 1.61e-22 | 96.3 |
| MS.gene44004.t1 | AT4G34530 | 68.182 | 66 | 20 | 1 | 192 | 256 | 172 | 237 | 5.10e-21 | 92.8 |
| MS.gene44004.t1 | AT3G07340 | 69.697 | 66 | 19 | 1 | 192 | 256 | 258 | 323 | 6.54e-21 | 94.0 |
| MS.gene44004.t1 | AT3G07340 | 69.697 | 66 | 19 | 1 | 192 | 256 | 258 | 323 | 6.63e-21 | 93.6 |
| MS.gene44004.t1 | AT1G68920 | 68.182 | 66 | 20 | 1 | 192 | 256 | 302 | 367 | 1.14e-20 | 93.2 |
| MS.gene44004.t1 | AT1G68920 | 68.182 | 66 | 20 | 1 | 192 | 256 | 303 | 368 | 1.17e-20 | 93.2 |
| MS.gene44004.t1 | AT1G68920 | 68.182 | 66 | 20 | 1 | 192 | 256 | 303 | 368 | 1.17e-20 | 93.2 |
| MS.gene44004.t1 | AT1G68920 | 68.182 | 66 | 20 | 1 | 192 | 256 | 303 | 368 | 1.17e-20 | 93.2 |
| MS.gene44004.t1 | AT3G23690 | 61.333 | 75 | 28 | 1 | 183 | 256 | 182 | 256 | 1.81e-20 | 91.7 |
| MS.gene44004.t1 | AT1G10120 | 66.667 | 66 | 21 | 1 | 192 | 256 | 206 | 271 | 4.15e-20 | 90.9 |
| MS.gene44004.t1 | AT1G10120 | 66.667 | 66 | 21 | 1 | 192 | 256 | 206 | 271 | 4.15e-20 | 90.9 |
| MS.gene44004.t1 | AT5G62610 | 57.333 | 75 | 31 | 1 | 183 | 256 | 144 | 218 | 6.85e-20 | 88.6 |
| MS.gene44004.t1 | AT5G62610 | 57.333 | 75 | 31 | 1 | 183 | 256 | 144 | 218 | 6.85e-20 | 88.6 |
| MS.gene44004.t1 | AT2G18300 | 65.152 | 66 | 22 | 1 | 192 | 256 | 185 | 250 | 7.92e-20 | 89.4 |
| MS.gene44004.t1 | AT2G18300 | 65.152 | 66 | 22 | 1 | 192 | 256 | 185 | 250 | 8.34e-20 | 89.4 |
| MS.gene44004.t1 | AT1G26260 | 63.636 | 66 | 23 | 1 | 192 | 256 | 172 | 237 | 1.01e-19 | 89.4 |
| MS.gene44004.t1 | AT1G26260 | 63.636 | 66 | 23 | 1 | 192 | 256 | 201 | 266 | 1.06e-19 | 89.7 |
| MS.gene44004.t1 | AT1G25330 | 42.308 | 130 | 60 | 4 | 184 | 312 | 96 | 211 | 1.11e-19 | 87.0 |
| MS.gene44004.t1 | AT4G36540 | 52.273 | 88 | 39 | 2 | 170 | 256 | 121 | 206 | 1.13e-19 | 88.6 |
| MS.gene44004.t1 | AT1G59640 | 65.152 | 66 | 22 | 1 | 192 | 256 | 136 | 201 | 1.14e-19 | 87.8 |
| MS.gene44004.t1 | AT2G18300 | 65.152 | 66 | 22 | 1 | 192 | 256 | 185 | 250 | 1.14e-19 | 89.4 |
| MS.gene44004.t1 | AT4G36540 | 52.273 | 88 | 39 | 2 | 170 | 256 | 121 | 206 | 1.18e-19 | 88.6 |
| MS.gene44004.t1 | AT1G26260 | 63.636 | 66 | 23 | 1 | 192 | 256 | 223 | 288 | 1.29e-19 | 89.7 |
| MS.gene44004.t1 | AT1G26260 | 63.636 | 66 | 23 | 1 | 192 | 256 | 223 | 288 | 1.29e-19 | 89.7 |
| MS.gene44004.t1 | AT1G26260 | 63.636 | 66 | 23 | 1 | 192 | 256 | 223 | 288 | 1.29e-19 | 89.7 |
| MS.gene44004.t1 | AT1G26260 | 63.636 | 66 | 23 | 1 | 192 | 256 | 223 | 288 | 1.29e-19 | 89.7 |
| MS.gene44004.t1 | AT2G42300 | 44.737 | 114 | 58 | 3 | 192 | 301 | 185 | 297 | 4.10e-19 | 87.4 |
| MS.gene44004.t1 | AT1G59640 | 65.152 | 66 | 22 | 1 | 192 | 256 | 136 | 201 | 4.20e-19 | 87.4 |
| MS.gene44004.t1 | AT1G73830 | 52.809 | 89 | 38 | 3 | 192 | 279 | 147 | 232 | 1.07e-18 | 85.1 |
| MS.gene44004.t1 | AT1G73830 | 52.809 | 89 | 38 | 3 | 192 | 279 | 147 | 232 | 1.14e-18 | 85.1 |
| MS.gene44004.t1 | AT3G57800 | 47.619 | 105 | 49 | 3 | 192 | 291 | 204 | 307 | 6.70e-18 | 84.3 |
| MS.gene44004.t1 | AT1G27740 | 45.833 | 96 | 46 | 1 | 171 | 266 | 152 | 241 | 1.31e-17 | 82.0 |
| MS.gene44004.t1 | AT2G20180 | 56.452 | 62 | 27 | 0 | 195 | 256 | 210 | 271 | 2.12e-17 | 83.2 |
| MS.gene44004.t1 | AT2G20180 | 56.452 | 62 | 27 | 0 | 195 | 256 | 210 | 271 | 2.12e-17 | 83.2 |
| MS.gene44004.t1 | AT2G20180 | 56.452 | 62 | 27 | 0 | 195 | 256 | 210 | 271 | 2.12e-17 | 83.2 |
| MS.gene44004.t1 | AT4G33880 | 48.837 | 86 | 44 | 0 | 191 | 276 | 265 | 350 | 2.38e-17 | 82.4 |
| MS.gene44004.t1 | AT1G18400 | 55.405 | 74 | 31 | 2 | 192 | 264 | 145 | 217 | 3.11e-17 | 80.5 |
| MS.gene44004.t1 | AT2G20180 | 55.556 | 63 | 28 | 0 | 194 | 256 | 280 | 342 | 3.25e-17 | 83.2 |
| MS.gene44004.t1 | AT2G20180 | 55.556 | 63 | 28 | 0 | 194 | 256 | 280 | 342 | 3.25e-17 | 83.2 |
| MS.gene44004.t1 | AT2G20180 | 55.556 | 63 | 28 | 0 | 194 | 256 | 280 | 342 | 3.25e-17 | 83.2 |
| MS.gene44004.t1 | AT2G20180 | 55.556 | 63 | 28 | 0 | 194 | 256 | 280 | 342 | 3.25e-17 | 83.2 |
| MS.gene44004.t1 | AT2G14760 | 56.522 | 69 | 30 | 0 | 191 | 259 | 236 | 304 | 4.48e-17 | 81.6 |
| MS.gene44004.t1 | AT1G18400 | 54.667 | 75 | 32 | 2 | 192 | 265 | 145 | 218 | 6.67e-17 | 80.1 |
| MS.gene44004.t1 | AT1G09530 | 51.562 | 64 | 31 | 0 | 194 | 257 | 339 | 402 | 8.91e-17 | 82.0 |
| MS.gene44004.t1 | AT1G09530 | 51.562 | 64 | 31 | 0 | 194 | 257 | 339 | 402 | 8.91e-17 | 82.0 |
| MS.gene44004.t1 | AT1G09530 | 51.562 | 64 | 31 | 0 | 194 | 257 | 339 | 402 | 8.91e-17 | 82.0 |
| MS.gene44004.t1 | AT1G09530 | 51.562 | 64 | 31 | 0 | 194 | 257 | 339 | 402 | 8.91e-17 | 82.0 |
| MS.gene44004.t1 | AT1G09530 | 51.562 | 64 | 31 | 0 | 194 | 257 | 339 | 402 | 8.91e-17 | 82.0 |
| MS.gene44004.t1 | AT1G09530 | 51.562 | 64 | 31 | 0 | 194 | 257 | 339 | 402 | 8.91e-17 | 82.0 |
| MS.gene44004.t1 | AT2G42300 | 62.121 | 66 | 24 | 1 | 192 | 256 | 185 | 250 | 1.17e-16 | 79.3 |
| MS.gene44004.t1 | AT2G42280 | 56.522 | 69 | 29 | 1 | 191 | 258 | 278 | 346 | 1.64e-16 | 80.1 |
| MS.gene44004.t1 | AT2G20180 | 56.667 | 60 | 26 | 0 | 194 | 253 | 280 | 339 | 2.70e-16 | 79.3 |
| MS.gene44004.t1 | AT5G43175 | 46.250 | 80 | 43 | 0 | 187 | 266 | 127 | 206 | 3.93e-16 | 77.0 |
| MS.gene44004.t1 | AT4G09180 | 57.576 | 66 | 27 | 1 | 191 | 255 | 183 | 248 | 4.75e-16 | 77.4 |
| MS.gene44004.t1 | AT1G35460 | 57.576 | 66 | 27 | 1 | 191 | 255 | 180 | 245 | 9.33e-16 | 76.6 |
| MS.gene44004.t1 | AT2G42280 | 59.375 | 64 | 25 | 1 | 191 | 253 | 278 | 341 | 1.22e-15 | 77.8 |
| MS.gene44004.t1 | AT1G51140 | 55.072 | 69 | 30 | 1 | 191 | 258 | 303 | 371 | 8.58e-15 | 75.1 |
| MS.gene44004.t1 | AT2G14760 | 44.211 | 95 | 40 | 1 | 191 | 272 | 236 | 330 | 1.02e-14 | 74.7 |
| MS.gene44004.t1 | AT4G36930 | 55.932 | 59 | 26 | 0 | 198 | 256 | 197 | 255 | 1.46e-14 | 74.7 |
| MS.gene44004.t1 | AT5G67110 | 42.529 | 87 | 48 | 1 | 187 | 273 | 82 | 166 | 2.05e-14 | 72.0 |
| MS.gene44004.t1 | AT4G00050 | 47.826 | 69 | 36 | 0 | 187 | 255 | 100 | 168 | 4.36e-14 | 72.4 |
| MS.gene44004.t1 | AT5G37800 | 54.237 | 59 | 27 | 0 | 201 | 259 | 210 | 268 | 7.75e-14 | 71.6 |
| MS.gene44004.t1 | AT1G66470 | 53.226 | 62 | 29 | 0 | 201 | 262 | 204 | 265 | 7.76e-14 | 71.6 |
| MS.gene44004.t1 | AT4G00050 | 47.826 | 69 | 36 | 0 | 187 | 255 | 202 | 270 | 1.08e-13 | 72.0 |
| MS.gene44004.t1 | AT4G00050 | 47.826 | 69 | 36 | 0 | 187 | 255 | 202 | 270 | 1.17e-13 | 72.0 |
| MS.gene44004.t1 | AT3G21330 | 57.143 | 56 | 24 | 0 | 199 | 254 | 276 | 331 | 1.33e-13 | 71.6 |
| MS.gene44004.t1 | AT4G28815 | 49.123 | 57 | 29 | 0 | 195 | 251 | 71 | 127 | 1.34e-13 | 70.1 |
| MS.gene44004.t1 | AT4G28790 | 45.588 | 68 | 37 | 0 | 189 | 256 | 268 | 335 | 2.60e-13 | 70.9 |
| MS.gene44004.t1 | AT4G28815 | 49.123 | 57 | 29 | 0 | 195 | 251 | 147 | 203 | 4.20e-13 | 69.7 |
| MS.gene44004.t1 | AT2G43010 | 58.333 | 60 | 25 | 0 | 195 | 254 | 254 | 313 | 1.07e-12 | 69.3 |
| MS.gene44004.t1 | AT2G43010 | 58.333 | 60 | 25 | 0 | 195 | 254 | 254 | 313 | 1.08e-12 | 69.3 |
| MS.gene44004.t1 | AT2G43010 | 58.333 | 60 | 25 | 0 | 195 | 254 | 261 | 320 | 1.13e-12 | 69.3 |
| MS.gene44004.t1 | AT2G43010 | 58.333 | 60 | 25 | 0 | 195 | 254 | 254 | 313 | 1.32e-12 | 68.9 |
| MS.gene44004.t1 | AT3G59060 | 53.968 | 63 | 29 | 0 | 194 | 256 | 252 | 314 | 1.38e-12 | 68.9 |
| MS.gene44004.t1 | AT3G59060 | 53.968 | 63 | 29 | 0 | 194 | 256 | 252 | 314 | 1.38e-12 | 68.9 |
| MS.gene44004.t1 | AT3G59060 | 53.968 | 63 | 29 | 0 | 194 | 256 | 252 | 314 | 1.38e-12 | 68.9 |
| MS.gene44004.t1 | AT3G59060 | 53.968 | 63 | 29 | 0 | 194 | 256 | 252 | 314 | 1.40e-12 | 68.9 |
| MS.gene44004.t1 | AT5G01305 | 47.692 | 65 | 34 | 0 | 187 | 251 | 32 | 96 | 1.46e-12 | 65.9 |
| MS.gene44004.t1 | AT2G43010 | 58.333 | 60 | 25 | 0 | 195 | 254 | 296 | 355 | 1.58e-12 | 68.9 |
| MS.gene44004.t1 | AT4G28800 | 40.000 | 80 | 43 | 1 | 195 | 269 | 252 | 331 | 2.38e-12 | 68.2 |
| MS.gene44004.t1 | AT2G43140 | 55.385 | 65 | 28 | 1 | 191 | 254 | 133 | 197 | 2.42e-12 | 65.9 |
| MS.gene44004.t1 | AT2G43140 | 55.385 | 65 | 28 | 1 | 191 | 254 | 230 | 294 | 2.53e-12 | 67.4 |
| MS.gene44004.t1 | AT4G28800 | 41.333 | 75 | 43 | 1 | 195 | 269 | 264 | 337 | 4.80e-12 | 67.4 |
| MS.gene44004.t1 | AT4G28790 | 45.312 | 64 | 35 | 0 | 189 | 252 | 268 | 331 | 5.42e-12 | 66.6 |
| MS.gene44004.t1 | AT2G46970 | 42.857 | 63 | 36 | 0 | 194 | 256 | 194 | 256 | 8.06e-12 | 66.2 |
| MS.gene44004.t1 | AT2G46970 | 42.857 | 63 | 36 | 0 | 194 | 256 | 225 | 287 | 8.50e-12 | 66.2 |
| MS.gene44004.t1 | AT2G46970 | 42.857 | 63 | 36 | 0 | 194 | 256 | 203 | 265 | 9.11e-12 | 66.2 |
| MS.gene44004.t1 | AT4G00120 | 46.429 | 56 | 30 | 0 | 199 | 254 | 119 | 174 | 9.17e-11 | 61.2 |
Find 98 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATGATTGTTGTTATTAT+TGG | 0.222076 | 1.3:+57326718 | None:intergenic |
| ACCACTTCGCCCAGGCTTGC+TGG | 0.236946 | 1.3:+57322414 | None:intergenic |
| AATGCCATTAGGGTTGAATT+TGG | 0.253477 | 1.3:-57326825 | MS.gene44004:CDS |
| TATGGAGGAGTGTTGCAATT+AGG | 0.263483 | 1.3:-57326890 | MS.gene44004:CDS |
| TATGTGTGGTTGTTTGATTC+AGG | 0.263977 | 1.3:+57322233 | None:intergenic |
| TTGATGGTGAAGGTGAAGTT+GGG | 0.297221 | 1.3:+57325680 | None:intergenic |
| TGCTCCAAATTCAACCCTAA+TGG | 0.335229 | 1.3:+57326821 | None:intergenic |
| GCAGTAACAGACGCTGGATT+TGG | 0.346934 | 1.3:+57323426 | None:intergenic |
| ATGGAGGAGTGTTGCAATTA+GGG | 0.350739 | 1.3:-57326889 | MS.gene44004:CDS |
| CAGACGCTGGATTTGGTTGC+TGG | 0.356776 | 1.3:+57323433 | None:intergenic |
| ACAACAAGTGGCTAAACTTA+TGG | 0.361454 | 1.3:-57322375 | MS.gene44004:CDS |
| CCTGAGAACGGAGTTGGATA+TGG | 0.362508 | 1.3:-57326908 | MS.gene44004:CDS |
| GAAGGTGAAGTTGGGGTTGA+GGG | 0.362623 | 1.3:+57325688 | None:intergenic |
| TTCTTCACCTTCTTCTACTC+CGG | 0.363218 | 1.3:-57326639 | MS.gene44004:CDS |
| ATTGCTGATGCTAGAGATAT+AGG | 0.364284 | 1.3:+57322296 | None:intergenic |
| AAAATACCTGTTGGTGTTGA+TGG | 0.374169 | 1.3:+57325664 | None:intergenic |
| GTGGAACCAACCAGCAAGCC+TGG | 0.378933 | 1.3:-57322424 | MS.gene44004:CDS |
| GGAGGAGGAATAATGCCATT+AGG | 0.379503 | 1.3:-57326836 | MS.gene44004:CDS |
| GTTCCTTAGGCTCCAAGTTA+AGG | 0.387394 | 1.3:-57323001 | MS.gene44004:intron |
| GGTAATTGTTCAGAAGGATT+AGG | 0.387856 | 1.3:-57326962 | MS.gene44004:CDS |
| GTTGATGGTGAAGGTGAAGT+TGG | 0.390042 | 1.3:+57325679 | None:intergenic |
| TTGATTATGTGAAGTTCCTT+AGG | 0.396018 | 1.3:-57323014 | MS.gene44004:CDS |
| ACCACCAACCTTGTTGATGC+TGG | 0.396309 | 1.3:+57323186 | None:intergenic |
| TGAAGGTGAAGTTGGGGTTG+AGG | 0.397507 | 1.3:+57325687 | None:intergenic |
| AGAAGTGATATTGTTGTTGT+TGG | 0.398144 | 1.3:+57326658 | None:intergenic |
| AAGGTGAAGTTGGGGTTGAG+GGG | 0.404256 | 1.3:+57325689 | None:intergenic |
| TGAAAGAATGAAAGCATTGC+AGG | 0.405094 | 1.3:-57323218 | MS.gene44004:CDS |
| TATCACCTCCACTGCAGAAA+CGG | 0.425349 | 1.3:+57322621 | None:intergenic |
| AAAATCATCATGGGTTTCTC+AGG | 0.434914 | 1.3:-57326799 | MS.gene44004:CDS |
| TGAAAACATACCGTGATTCC+CGG | 0.439741 | 1.3:+57326620 | None:intergenic |
| GAGGAGGAATAATGCCATTA+GGG | 0.440092 | 1.3:-57326835 | MS.gene44004:CDS |
| CTTCGCCCAGGCTTGCTGGT+TGG | 0.445620 | 1.3:+57322418 | None:intergenic |
| ATCACCTCCACTGCAGAAAC+GGG | 0.447262 | 1.3:+57322622 | None:intergenic |
| GGTTCTTTGAGAGGAGGAGG+AGG | 0.456738 | 1.3:-57326851 | MS.gene44004:CDS |
| GGACGGATGCCAGGTGGTTG+TGG | 0.459379 | 1.3:+57323399 | None:intergenic |
| TCTTTACACATACCTTAACT+TGG | 0.464563 | 1.3:+57322989 | None:intergenic |
| CCATATCCAACTCCGTTCTC+AGG | 0.478428 | 1.3:+57326908 | None:intergenic |
| CCTTCACCATCAACACCAAC+AGG | 0.479448 | 1.3:-57325670 | MS.gene44004:intron |
| AGGCATTATGCAAAGTGCCT+TGG | 0.488843 | 1.3:+57322316 | None:intergenic |
| AGGTGAAGTTGGGGTTGAGG+GGG | 0.491473 | 1.3:+57325690 | None:intergenic |
| ATGAGTAGACTTGGTGGAGC+TGG | 0.497941 | 1.3:-57322673 | MS.gene44004:CDS |
| TACCCGCTCAGCAATGCTGT+GGG | 0.498183 | 1.3:+57323341 | None:intergenic |
| CGCACTCGAGGACGGATGCC+AGG | 0.498354 | 1.3:+57323390 | None:intergenic |
| GATTGGAGCATGGGGCGTAC+AGG | 0.498420 | 1.3:+57325717 | None:intergenic |
| AATTTGGAGCAAAATCATCA+TGG | 0.505233 | 1.3:-57326809 | MS.gene44004:CDS |
| ATACCTTAACTTGGAGCCTA+AGG | 0.506615 | 1.3:+57322998 | None:intergenic |
| GATAACGTTGTAGATGTTGA+AGG | 0.512654 | 1.3:-57326749 | MS.gene44004:CDS |
| GCAGTGCCTGAGAACGGAGT+TGG | 0.513102 | 1.3:-57326914 | MS.gene44004:CDS |
| ATCGTTCGACCACTTCGCCC+AGG | 0.518825 | 1.3:+57322406 | None:intergenic |
| TTCTTGCTCGCACTCGAGGA+CGG | 0.520681 | 1.3:+57323382 | None:intergenic |
| GGTGGTTCTTTGAGAGGAGG+AGG | 0.522850 | 1.3:-57326854 | MS.gene44004:CDS |
| CTTCCCATCTTAGACATGGC+TGG | 0.523854 | 1.3:-57326983 | None:intergenic |
| CCACCAACCTTGTTGATGCT+GGG | 0.525257 | 1.3:+57323187 | None:intergenic |
| TCTTCACCTTCTTCTACTCC+GGG | 0.529181 | 1.3:-57326638 | MS.gene44004:CDS |
| ATGGCTGGTAATTGTTCAGA+AGG | 0.538081 | 1.3:-57326968 | MS.gene44004:CDS |
| ATTTGGAGCAAAATCATCAT+GGG | 0.540073 | 1.3:-57326808 | MS.gene44004:CDS |
| TTCTTCTACTCCGGGAATCA+CGG | 0.541214 | 1.3:-57326630 | MS.gene44004:intron |
| CCCGCTCAGCAATGCTGTGG+GGG | 0.544277 | 1.3:+57323343 | None:intergenic |
| CAATTAGGGTCCACACCTCA+TGG | 0.545517 | 1.3:-57326875 | MS.gene44004:CDS |
| GTCTTGAGCATGAGTAGACT+TGG | 0.551854 | 1.3:-57322682 | MS.gene44004:CDS |
| CCTCGAGTGCGAGCAAGAAG+AGG | 0.556095 | 1.3:-57323378 | MS.gene44004:CDS |
| CCTCTTCTTGCTCGCACTCG+AGG | 0.556798 | 1.3:+57323378 | None:intergenic |
| TGGAACCAACCAGCAAGCCT+GGG | 0.559582 | 1.3:-57322423 | MS.gene44004:CDS |
| TTGAGCATGAGTAGACTTGG+TGG | 0.564283 | 1.3:-57322679 | MS.gene44004:CDS |
| TGATGTTCCCGTTTCTGCAG+TGG | 0.567967 | 1.3:-57322629 | MS.gene44004:CDS |
| CCTCATGGTGGTTCTTTGAG+AGG | 0.573318 | 1.3:-57326860 | MS.gene44004:CDS |
| GGGGTTGAGATTGGAGCATG+GGG | 0.575204 | 1.3:+57325709 | None:intergenic |
| TAGGGATTCGATGCAGATGA+GGG | 0.576882 | 1.3:-57325787 | MS.gene44004:CDS |
| ACCAGCAAGCCTGGGCGAAG+TGG | 0.578504 | 1.3:-57322415 | MS.gene44004:CDS |
| AAACTTATGGAGGAAGATGT+TGG | 0.580007 | 1.3:-57322362 | MS.gene44004:CDS |
| GTGATTCCCGGAGTAGAAGA+AGG | 0.581181 | 1.3:+57326632 | None:intergenic |
| ACTGCCATGCCACAACCACC+TGG | 0.582186 | 1.3:-57323408 | MS.gene44004:CDS |
| GATGCCAGGTGGTTGTGGCA+TGG | 0.582703 | 1.3:+57323404 | None:intergenic |
| ATCTTAGCAGTGCCTGAGAA+CGG | 0.585394 | 1.3:-57326920 | MS.gene44004:CDS |
| TTACCCGCTCAGCAATGCTG+TGG | 0.587723 | 1.3:+57323340 | None:intergenic |
| CATGGTGGTTCTTTGAGAGG+AGG | 0.592231 | 1.3:-57326857 | MS.gene44004:CDS |
| ACCCGCTCAGCAATGCTGTG+GGG | 0.594692 | 1.3:+57323342 | None:intergenic |
| CGTACAGGTTGAGCATGAGT+AGG | 0.607775 | 1.3:+57325732 | None:intergenic |
| CAAAGAACCACCATGAGGTG+TGG | 0.610161 | 1.3:+57326865 | None:intergenic |
| TGGGCGAAGTGGTCGAACGA+TGG | 0.612445 | 1.3:-57322404 | MS.gene44004:CDS |
| TATGCAACTTCTTCAATCCA+AGG | 0.620224 | 1.3:-57322333 | MS.gene44004:CDS |
| TGATGGTGAAGGTGAAGTTG+GGG | 0.622929 | 1.3:+57325681 | None:intergenic |
| ACAAGTGGCTAAACTTATGG+AGG | 0.629716 | 1.3:-57322372 | MS.gene44004:CDS |
| CGATGGAACAGAACAACAAG+TGG | 0.630398 | 1.3:-57322387 | MS.gene44004:CDS |
| ATTGTTGATGAGTCTGATTG+AGG | 0.631316 | 1.3:+57322263 | None:intergenic |
| ATTAGTTCCCAGCATCAACA+AGG | 0.633940 | 1.3:-57323194 | MS.gene44004:intron |
| ATAGGGATTCGATGCAGATG+AGG | 0.634626 | 1.3:-57325788 | MS.gene44004:CDS |
| GAGAACGGAGTTGGATATGG+AGG | 0.637215 | 1.3:-57326905 | MS.gene44004:CDS |
| GGCAGCATCAAGATGCAACA+CGG | 0.647342 | 1.3:-57326778 | MS.gene44004:CDS |
| TAGGAGTAACATTCTATGTG+TGG | 0.651108 | 1.3:+57322219 | None:intergenic |
| GGCATGGCAGTAACAGACGC+TGG | 0.657355 | 1.3:+57323420 | None:intergenic |
| TGTTCCCGTTTCTGCAGTGG+AGG | 0.663300 | 1.3:-57322626 | MS.gene44004:intron |
| AGGGATTCGATGCAGATGAG+GGG | 0.670786 | 1.3:-57325786 | MS.gene44004:CDS |
| CCTGTTGGTGTTGATGGTGA+AGG | 0.672072 | 1.3:+57325670 | None:intergenic |
| ACTCGAGGACGGATGCCAGG+TGG | 0.696377 | 1.3:+57323393 | None:intergenic |
| CCTCTCAAAGAACCACCATG+AGG | 0.710136 | 1.3:+57326860 | None:intergenic |
| GTGGTTGTAGACTGACAAAG+CGG | 0.742255 | 1.3:-57323055 | MS.gene44004:intron |
| TTAGGGTCCACACCTCATGG+TGG | 0.762797 | 1.3:-57326872 | MS.gene44004:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAAAAATAAATTAT+AGG | + | chr1.3:57324576-57324595 | None:intergenic | 0.0% |
| !! | TTATAAATATAATTATATAT+AGG | + | chr1.3:57326088-57326107 | None:intergenic | 0.0% |
| !! | ATCCTAATATTTAATAATTA+AGG | - | chr1.3:57323967-57323986 | MS.gene44004:intron | 10.0% |
| !! | ATTTGATATTACAAAAATTT+AGG | - | chr1.3:57325653-57325672 | MS.gene44004:intron | 10.0% |
| !! | TCCTAATATTTAATAATTAA+GGG | - | chr1.3:57323968-57323987 | MS.gene44004:intron | 10.0% |
| !! | TTTGATATTACAAAAATTTA+GGG | - | chr1.3:57325654-57325673 | MS.gene44004:intron | 10.0% |
| !!! | ATAATATTTTGTCTTTATAT+AGG | + | chr1.3:57323809-57323828 | None:intergenic | 10.0% |
| !!! | TAAAAATACATTTTTTTTTC+CGG | - | chr1.3:57325099-57325118 | MS.gene44004:intron | 10.0% |
| !! | AACATATGAATCAAATTAAA+TGG | + | chr1.3:57326491-57326510 | None:intergenic | 15.0% |
| !! | AATAAAATATACATAAGCTA+AGG | - | chr1.3:57323944-57323963 | MS.gene44004:intron | 15.0% |
| !! | ATGATAAAGATAATATCAAA+AGG | - | chr1.3:57323665-57323684 | MS.gene44004:intron | 15.0% |
| !! | CTCATTAACATTAAAAAATT+TGG | + | chr1.3:57324552-57324571 | None:intergenic | 15.0% |
| !! | TAAAGAATATGAAGTAAAAA+TGG | + | chr1.3:57326654-57326673 | None:intergenic | 15.0% |
| !! | TAAATATTAAAAATACCTGT+TGG | + | chr1.3:57323548-57323567 | None:intergenic | 15.0% |
| !! | TAGTATAATAGATAAATGAT+TGG | + | chr1.3:57323630-57323649 | None:intergenic | 15.0% |
| !! | TATATATTATTAAGATGAGA+AGG | + | chr1.3:57323720-57323739 | None:intergenic | 15.0% |
| !! | TCCCTTAATTATTAAATATT+AGG | + | chr1.3:57323972-57323991 | None:intergenic | 15.0% |
| !! | TGATAAAGATAATATCAAAA+GGG | - | chr1.3:57323666-57323685 | MS.gene44004:intron | 15.0% |
| !! | TTATAAAATGAATGAATGAA+CGG | + | chr1.3:57323920-57323939 | None:intergenic | 15.0% |
| !!! | AATATGATTCATTTTTTAAG+AGG | + | chr1.3:57322777-57322796 | None:intergenic | 15.0% |
| !!! | AATTTTTTAAACATGAATCA+AGG | + | chr1.3:57324159-57324178 | None:intergenic | 15.0% |
| !!! | TTATGTAATTTGAAGTTATA+TGG | - | chr1.3:57323374-57323393 | MS.gene44004:CDS | 15.0% |
| !!! | TTTTTAACTAACATTTCAAA+AGG | + | chr1.3:57324297-57324316 | None:intergenic | 15.0% |
| !! | AAAAATAAGGTGAATACATA+GGG | - | chr1.3:57325246-57325265 | MS.gene44004:intron | 20.0% |
| !! | AATTTAGTGTAATTATGTGT+TGG | - | chr1.3:57322679-57322698 | MS.gene44004:CDS | 20.0% |
| !! | ATAGAAAATTATATCTCTCA+AGG | - | chr1.3:57323318-57323337 | MS.gene44004:intron | 20.0% |
| !! | CATTATGCAATAAAATGTAA+TGG | + | chr1.3:57323033-57323052 | None:intergenic | 20.0% |
| !! | CTATTTCAAAATGAATTTCA+AGG | + | chr1.3:57326282-57326301 | None:intergenic | 20.0% |
| !! | CTTAAATATTAATCATCAAG+AGG | + | chr1.3:57323883-57323902 | None:intergenic | 20.0% |
| !! | TGTTAATTTCAATTCTTCAA+GGG | - | chr1.3:57324091-57324110 | MS.gene44004:intron | 20.0% |
| !! | TGTTTAATATTATGAAACTG+TGG | - | chr1.3:57326126-57326145 | MS.gene44004:intron | 20.0% |
| !! | TTCAAATTTATAAATGGTTC+AGG | + | chr1.3:57326621-57326640 | None:intergenic | 20.0% |
| !! | TTGAAATAGAAGTAATTGAA+GGG | - | chr1.3:57326293-57326312 | MS.gene44004:intron | 20.0% |
| !! | TTGAGTATTATAAGAAAGAA+TGG | + | chr1.3:57325567-57325586 | None:intergenic | 20.0% |
| !!! | AAAGAGAGTATTGTTATTTA+TGG | - | chr1.3:57323349-57323368 | MS.gene44004:CDS | 20.0% |
| !!! | AATAAAATGTAATGGAAAAG+TGG | + | chr1.3:57323025-57323044 | None:intergenic | 20.0% |
| !!! | ACTTTTTAAGGTATTACATA+GGG | - | chr1.3:57325147-57325166 | MS.gene44004:intron | 20.0% |
| !!! | AGTTTGCTTATAAAAGTTTT+TGG | + | chr1.3:57323222-57323241 | None:intergenic | 20.0% |
| !!! | ATGATGATTGTTGTTATTAT+TGG | + | chr1.3:57322485-57322504 | None:intergenic | 20.0% |
| !!! | TATTTTCATTTGCAGAATTA+CGG | - | chr1.3:57324117-57324136 | MS.gene44004:intron | 20.0% |
| !!! | TTTGAAATAGAAGTAATTGA+AGG | - | chr1.3:57326292-57326311 | MS.gene44004:intron | 20.0% |
| !!! | TTTTGTCTTTATATAGGTTT+AGG | + | chr1.3:57323803-57323822 | None:intergenic | 20.0% |
| ! | AAAGAATGGAACACATTATA+CGG | + | chr1.3:57325553-57325572 | None:intergenic | 25.0% |
| ! | AAATCAATACTCTTACTTGT+AGG | - | chr1.3:57325001-57325020 | MS.gene44004:intron | 25.0% |
| ! | AAGCAGGTTAAAAAAATCAT+TGG | + | chr1.3:57326454-57326473 | None:intergenic | 25.0% |
| ! | AATCAATACTCTTACTTGTA+GGG | - | chr1.3:57325002-57325021 | MS.gene44004:intron | 25.0% |
| ! | ACTAACATTTCAAAAGGAAT+TGG | + | chr1.3:57324291-57324310 | None:intergenic | 25.0% |
| ! | AGATAAATGATTGGAAAATG+AGG | + | chr1.3:57323621-57323640 | None:intergenic | 25.0% |
| ! | AGCAGGTTAAAAAAATCATT+GGG | + | chr1.3:57326453-57326472 | None:intergenic | 25.0% |
| ! | AGGACAAAAATAACTACTAA+AGG | - | chr1.3:57325439-57325458 | MS.gene44004:intron | 25.0% |
| ! | ATATGAAGTAAAAATGGAAG+TGG | + | chr1.3:57326648-57326667 | None:intergenic | 25.0% |
| ! | ATATTATTCTCTATGAAGCA+AGG | - | chr1.3:57322624-57322643 | MS.gene44004:intron | 25.0% |
| ! | ATTAATCCTTGATCATATCT+TGG | - | chr1.3:57322875-57322894 | MS.gene44004:intron | 25.0% |
| ! | CAAAAATAAGGTGAATACAT+AGG | - | chr1.3:57325245-57325264 | MS.gene44004:intron | 25.0% |
| ! | CTAACATTTCAAAAGGAATT+GGG | + | chr1.3:57324290-57324309 | None:intergenic | 25.0% |
| ! | GATAAATGATTGGAAAATGA+GGG | + | chr1.3:57323620-57323639 | None:intergenic | 25.0% |
| ! | GGCATCTTCAAATTTATAAA+TGG | + | chr1.3:57326627-57326646 | None:intergenic | 25.0% |
| ! | GTGTTAATTTCAATTCTTCA+AGG | - | chr1.3:57324090-57324109 | MS.gene44004:intron | 25.0% |
| ! | TAACATTTCAAAAGGAATTG+GGG | + | chr1.3:57324289-57324308 | None:intergenic | 25.0% |
| ! | TTAAACATGAATCAAGGAAA+GGG | + | chr1.3:57324153-57324172 | None:intergenic | 25.0% |
| ! | TTAATCCTTGATCATATCTT+GGG | - | chr1.3:57322876-57322895 | MS.gene44004:intron | 25.0% |
| ! | TTTAAACATGAATCAAGGAA+AGG | + | chr1.3:57324154-57324173 | None:intergenic | 25.0% |
| ! | TTTGATTCATATGTTGAAAC+AGG | - | chr1.3:57326496-57326515 | MS.gene44004:intron | 25.0% |
| !! | ATAACCAAAACCAAATGTTT+TGG | + | chr1.3:57322979-57322998 | None:intergenic | 25.0% |
| !! | ATTAGAAATGAGTTACCTTT+TGG | + | chr1.3:57324774-57324793 | None:intergenic | 25.0% |
| !! | ATTTTCATTTGCAGAATTAC+GGG | - | chr1.3:57324118-57324137 | MS.gene44004:intron | 25.0% |
| !! | CTTTTCTTTATGCTTTGTAA+AGG | + | chr1.3:57323857-57323876 | None:intergenic | 25.0% |
| !!! | CACTTTTTAAGGTATTACAT+AGG | - | chr1.3:57325146-57325165 | MS.gene44004:intron | 25.0% |
| !!! | TACAAGTAAGAGTATTGATT+TGG | + | chr1.3:57325002-57325021 | None:intergenic | 25.0% |
| !!! | TGGTTAGAATTCACTTTTTA+AGG | - | chr1.3:57325135-57325154 | MS.gene44004:intron | 25.0% |
| !!! | TGGTTTTGGTTATTGTTATT+AGG | - | chr1.3:57322986-57323005 | MS.gene44004:intron | 25.0% |
| AAATAAATGATGGTCCCATT+CGG | + | chr1.3:57324806-57324825 | None:intergenic | 30.0% | |
| AACATTTCAAAAGGAATTGG+GGG | + | chr1.3:57324288-57324307 | None:intergenic | 30.0% | |
| AAGCCCTAACAAATAAATGA+TGG | + | chr1.3:57324816-57324835 | None:intergenic | 30.0% | |
| AATTGCATTTACGTACGTTA+TGG | - | chr1.3:57325623-57325642 | MS.gene44004:intron | 30.0% | |
| AGAAGTTATGCCAAAACATT+TGG | - | chr1.3:57322966-57322985 | MS.gene44004:intron | 30.0% | |
| AGTAATTGTCCTAGAGTAAT+AGG | - | chr1.3:57324742-57324761 | MS.gene44004:intron | 30.0% | |
| ATGCAAACTGAGTTATAATC+GGG | - | chr1.3:57325416-57325435 | MS.gene44004:intron | 30.0% | |
| CAGGTTAAAAAAATCATTGG+GGG | + | chr1.3:57326451-57326470 | None:intergenic | 30.0% | |
| CATGCAAACTGAGTTATAAT+CGG | - | chr1.3:57325415-57325434 | MS.gene44004:intron | 30.0% | |
| CTCTAGCACAAATTATTGAA+TGG | - | chr1.3:57323240-57323259 | MS.gene44004:CDS | 30.0% | |
| GCAGGTTAAAAAAATCATTG+GGG | + | chr1.3:57326452-57326471 | None:intergenic | 30.0% | |
| GCGTAGTTAAATATAAGAGT+CGG | + | chr1.3:57325191-57325210 | None:intergenic | 30.0% | |
| TAAAACAAAAGAAAACGCGT+TGG | + | chr1.3:57324701-57324720 | None:intergenic | 30.0% | |
| TAAACATGAATCAAGGAAAG+GGG | + | chr1.3:57324152-57324171 | None:intergenic | 30.0% | |
| TAATACTGATATTTCACTCG+AGG | + | chr1.3:57324033-57324052 | None:intergenic | 30.0% | |
| TAATCCTTGATCATATCTTG+GGG | - | chr1.3:57322877-57322896 | MS.gene44004:intron | 30.0% | |
| TATTTGCCTAACTAAGATCT+TGG | + | chr1.3:57323301-57323320 | None:intergenic | 30.0% | |
| TCATTAATCACACACTAAAG+TGG | + | chr1.3:57324654-57324673 | None:intergenic | 30.0% | |
| TCCTTGACAAGAACTTTAAA+TGG | + | chr1.3:57324913-57324932 | None:intergenic | 30.0% | |
| TCGAGTGAAATATCAGTATT+AGG | - | chr1.3:57324032-57324051 | MS.gene44004:intron | 30.0% | |
| TGACGCTTAATCATAATTGT+CGG | - | chr1.3:57324876-57324895 | MS.gene44004:intron | 30.0% | |
| TTGACAAGAACTTTAAATGG+AGG | + | chr1.3:57324910-57324929 | None:intergenic | 30.0% | |
| TTGATTATGTGAAGTTCCTT+AGG | - | chr1.3:57326186-57326205 | MS.gene44004:intron | 30.0% | |
| ! | AAGTGATTAGTTAATAGTGC+TGG | - | chr1.3:57322903-57322922 | MS.gene44004:intron | 30.0% |
| ! | AATTTGGAGCAAAATCATCA+TGG | - | chr1.3:57322391-57322410 | MS.gene44004:CDS | 30.0% |
| ! | AGAAGTGATATTGTTGTTGT+TGG | + | chr1.3:57322545-57322564 | None:intergenic | 30.0% |
| ! | AGTGATTAGTTAATAGTGCT+GGG | - | chr1.3:57322904-57322923 | MS.gene44004:intron | 30.0% |
| ! | ATATAGGTTTAGGTTTGAGT+GGG | + | chr1.3:57323793-57323812 | None:intergenic | 30.0% |
| ! | ATTTGGAGCAAAATCATCAT+GGG | - | chr1.3:57322392-57322411 | MS.gene44004:CDS | 30.0% |
| ! | GATCCTTCTTGATTTTCATT+TGG | - | chr1.3:57326232-57326251 | MS.gene44004:intron | 30.0% |
| ! | GGACCATCATTTATTTGTTA+GGG | - | chr1.3:57324810-57324829 | MS.gene44004:intron | 30.0% |
| ! | TATATAGGTTTAGGTTTGAG+TGG | + | chr1.3:57323794-57323813 | None:intergenic | 30.0% |
| ! | TATGAAGCAGAGACATTTTT+CGG | + | chr1.3:57322747-57322766 | None:intergenic | 30.0% |
| ! | TCCATTTAAAGTTCTTGTCA+AGG | - | chr1.3:57324909-57324928 | MS.gene44004:intron | 30.0% |
| !! | TATGCCAAAACATTTGGTTT+TGG | - | chr1.3:57322972-57322991 | MS.gene44004:intron | 30.0% |
| !!! | CGTTGATGTATCTTTTTTTC+CGG | - | chr1.3:57324969-57324988 | MS.gene44004:intron | 30.0% |
| !!! | GTTGATGTATCTTTTTTTCC+GGG | - | chr1.3:57324970-57324989 | MS.gene44004:intron | 30.0% |
| !!! | TTGATGTATCTTTTTTTCCG+GGG | - | chr1.3:57324971-57324990 | MS.gene44004:intron | 30.0% |
| AAAATCATCATGGGTTTCTC+AGG | - | chr1.3:57322401-57322420 | MS.gene44004:CDS | 35.0% | |
| AAACTTATGGAGGAAGATGT+TGG | - | chr1.3:57326838-57326857 | MS.gene44004:CDS | 35.0% | |
| AATCCTTGATCATATCTTGG+GGG | - | chr1.3:57322878-57322897 | MS.gene44004:intron | 35.0% | |
| AATGCCATTAGGGTTGAATT+TGG | - | chr1.3:57322375-57322394 | MS.gene44004:CDS | 35.0% | |
| ACAACAAGTGGCTAAACTTA+TGG | - | chr1.3:57326825-57326844 | MS.gene44004:CDS | 35.0% | |
| ATATTTAAGCGCTTCATCCA+TGG | - | chr1.3:57323894-57323913 | MS.gene44004:intron | 35.0% | |
| ATGCAAACTGAGTTATACTC+GGG | - | chr1.3:57325218-57325237 | MS.gene44004:intron | 35.0% | |
| ATTGCTGATGCTAGAGATAT+AGG | + | chr1.3:57326907-57326926 | None:intergenic | 35.0% | |
| CATGCAAACTGAGTTATACT+CGG | - | chr1.3:57325217-57325236 | MS.gene44004:intron | 35.0% | |
| CGATTATAACTCAGTTTGCA+TGG | + | chr1.3:57325417-57325436 | None:intergenic | 35.0% | |
| GAGCCAAATGAAAATCAAGA+AGG | + | chr1.3:57326238-57326257 | None:intergenic | 35.0% | |
| GAGCTACTAATACTCTTCTT+TGG | + | chr1.3:57323696-57323715 | None:intergenic | 35.0% | |
| GATAACGTTGTAGATGTTGA+AGG | - | chr1.3:57322451-57322470 | MS.gene44004:intron | 35.0% | |
| GATTAGACATGTCTTCAAGT+CGG | + | chr1.3:57322725-57322744 | None:intergenic | 35.0% | |
| GCGTAGTTAAGTATAAGAGT+CGG | + | chr1.3:57325389-57325408 | None:intergenic | 35.0% | |
| GGCATGTAAAAGAATTAAGC+AGG | + | chr1.3:57326470-57326489 | None:intergenic | 35.0% | |
| GGGACCATCATTTATTTGTT+AGG | - | chr1.3:57324809-57324828 | MS.gene44004:intron | 35.0% | |
| GGTAATTGTTCAGAAGGATT+AGG | - | chr1.3:57322238-57322257 | MS.gene44004:CDS | 35.0% | |
| TAACCATTAAGCTCTTTGAC+CGG | + | chr1.3:57325121-57325140 | None:intergenic | 35.0% | |
| TATGCAACTTCTTCAATCCA+AGG | - | chr1.3:57326867-57326886 | MS.gene44004:CDS | 35.0% | |
| TATGTGTGGTTGTTTGATTC+AGG | + | chr1.3:57326970-57326989 | None:intergenic | 35.0% | |
| TCACTCGAGGAAAAAGAAAA+AGG | + | chr1.3:57324020-57324039 | None:intergenic | 35.0% | |
| TGAATCAAACAACCACACAT+AGG | - | chr1.3:57326969-57326988 | MS.gene44004:CDS | 35.0% | |
| TGTGTGAATGTTTAAACCGA+TGG | - | chr1.3:57323272-57323291 | MS.gene44004:intron | 35.0% | |
| TTGATCAAGATTCGTATGCA+TGG | - | chr1.3:57325480-57325499 | MS.gene44004:intron | 35.0% | |
| TTGGAAAATGAGGGACAATA+TGG | + | chr1.3:57323611-57323630 | None:intergenic | 35.0% | |
| ! | AAGTGCTGCAATATTGCAAT+GGG | + | chr1.3:57325741-57325760 | None:intergenic | 35.0% |
| ! | ATTAGTTAATAGTGCTGGGT+GGG | - | chr1.3:57322908-57322927 | MS.gene44004:intron | 35.0% |
| ! | ATTGTTGATGAGTCTGATTG+AGG | + | chr1.3:57326940-57326959 | None:intergenic | 35.0% |
| ! | GTGTAATTATGTGTTGGTGT+TGG | - | chr1.3:57322685-57322704 | MS.gene44004:CDS | 35.0% |
| ! | TTATATGGTTTGTCTCTTGC+AGG | - | chr1.3:57323389-57323408 | MS.gene44004:CDS | 35.0% |
| !! | AAAATACCTGTTGGTGTTGA+TGG | + | chr1.3:57323539-57323558 | None:intergenic | 35.0% |
| !! | AAAGTGCTGCAATATTGCAA+TGG | + | chr1.3:57325742-57325761 | None:intergenic | 35.0% |
| !! | GTATTGATTTGGTAAAACCC+CGG | + | chr1.3:57324991-57325010 | None:intergenic | 35.0% |
| !! | TGAAAGAATGAAAGCATTGC+AGG | - | chr1.3:57325982-57326001 | MS.gene44004:intron | 35.0% |
| !!! | AGGGTTGCTTTTGAAAATTC+AGG | - | chr1.3:57326312-57326331 | MS.gene44004:intron | 35.0% |
| AACTCTATGATCTGTGTGCA+GGG | - | chr1.3:57326739-57326758 | MS.gene44004:CDS | 40.0% | |
| AATGAATGAATGAACGGCCA+TGG | + | chr1.3:57323914-57323933 | None:intergenic | 40.0% | |
| ACAAGTGGCTAAACTTATGG+AGG | - | chr1.3:57326828-57326847 | MS.gene44004:CDS | 40.0% | |
| ACTAAGATCTTGGACTCCAT+CGG | + | chr1.3:57323291-57323310 | None:intergenic | 40.0% | |
| AGATTCGTATGCATGGAAGT+AGG | - | chr1.3:57325487-57325506 | MS.gene44004:intron | 40.0% | |
| ATGGCTGGTAATTGTTCAGA+AGG | - | chr1.3:57322232-57322251 | MS.gene44004:CDS | 40.0% | |
| ATTAGTTCCCAGCATCAACA+AGG | - | chr1.3:57326006-57326025 | MS.gene44004:intron | 40.0% | |
| CAAACTGAGTTATAATCGGG+AGG | - | chr1.3:57325419-57325438 | MS.gene44004:intron | 40.0% | |
| CGAGTATAACTCAGTTTGCA+TGG | + | chr1.3:57325219-57325238 | None:intergenic | 40.0% | |
| GAGGAGGAATAATGCCATTA+GGG | - | chr1.3:57322365-57322384 | MS.gene44004:CDS | 40.0% | |
| TAACCCCCAAGATATGATCA+AGG | + | chr1.3:57322884-57322903 | None:intergenic | 40.0% | |
| TACTCGGGAGGACAAAAATA+AGG | - | chr1.3:57325233-57325252 | MS.gene44004:intron | 40.0% | |
| TGAAAACATACCGTGATTCC+CGG | + | chr1.3:57322583-57322602 | None:intergenic | 40.0% | |
| TGCTCCAAATTCAACCCTAA+TGG | + | chr1.3:57322382-57322401 | None:intergenic | 40.0% | |
| TGGAGTCCAAGATCTTAGTT+AGG | - | chr1.3:57323292-57323311 | MS.gene44004:intron | 40.0% | |
| TGTCCTAGAGTAATAGGCAT+TGG | - | chr1.3:57324748-57324767 | MS.gene44004:intron | 40.0% | |
| TTCTTCACCTTCTTCTACTC+CGG | - | chr1.3:57322561-57322580 | MS.gene44004:intron | 40.0% | |
| TTTCCGGTCAAAGAGCTTAA+TGG | - | chr1.3:57325115-57325134 | MS.gene44004:intron | 40.0% | |
| ! | AACACATTATACGGCTAGCT+AGG | + | chr1.3:57325544-57325563 | None:intergenic | 40.0% |
| ! | ATACCTTAACTTGGAGCCTA+AGG | + | chr1.3:57326205-57326224 | None:intergenic | 40.0% |
| ! | GATTAGTTAATAGTGCTGGG+TGG | - | chr1.3:57322907-57322926 | MS.gene44004:intron | 40.0% |
| ! | TCCTTTAGCCTTTCTACTTG+CGG | - | chr1.3:57324056-57324075 | MS.gene44004:intron | 40.0% |
| !! | AGGGGTTTGTTTTCAACGTT+TGG | - | chr1.3:57323432-57323451 | MS.gene44004:CDS | 40.0% |
| !! | AGTAATAGGCATTGGCCAAA+AGG | - | chr1.3:57324756-57324775 | MS.gene44004:intron | 40.0% |
| !! | ATGGAGGAGTGTTGCAATTA+GGG | - | chr1.3:57322311-57322330 | MS.gene44004:CDS | 40.0% |
| !! | GTTTAGGTTTGAGTGGGTTA+CGG | + | chr1.3:57323787-57323806 | None:intergenic | 40.0% |
| !! | TATGGAGGAGTGTTGCAATT+AGG | - | chr1.3:57322310-57322329 | MS.gene44004:CDS | 40.0% |
| !! | TTGATGGTGAAGGTGAAGTT+GGG | + | chr1.3:57323523-57323542 | None:intergenic | 40.0% |
| ACTCTATGATCTGTGTGCAG+GGG | - | chr1.3:57326740-57326759 | MS.gene44004:CDS | 45.0% | |
| ATAGGGATTCGATGCAGATG+AGG | - | chr1.3:57323412-57323431 | MS.gene44004:CDS | 45.0% | |
| ATCTTAGCAGTGCCTGAGAA+CGG | - | chr1.3:57322280-57322299 | MS.gene44004:CDS | 45.0% | |
| CAAACTGAGTTATACTCGGG+AGG | - | chr1.3:57325221-57325240 | MS.gene44004:intron | 45.0% | |
| CAACTCTATGATCTGTGTGC+AGG | - | chr1.3:57326738-57326757 | MS.gene44004:CDS | 45.0% | |
| CGATGGAACAGAACAACAAG+TGG | - | chr1.3:57326813-57326832 | MS.gene44004:CDS | 45.0% | |
| CTAATAGCCTCGTACCGAAT+GGG | - | chr1.3:57324789-57324808 | MS.gene44004:intron | 45.0% | |
| GGAGGAGGAATAATGCCATT+AGG | - | chr1.3:57322364-57322383 | MS.gene44004:CDS | 45.0% | |
| GGTTTGTCTCTTGCAGGATA+GGG | - | chr1.3:57323395-57323414 | MS.gene44004:CDS | 45.0% | |
| GTCTTGAGCATGAGTAGACT+TGG | - | chr1.3:57326518-57326537 | MS.gene44004:intron | 45.0% | |
| GTGGTTGTAGACTGACAAAG+CGG | - | chr1.3:57326145-57326164 | MS.gene44004:intron | 45.0% | |
| GTTCCTTAGGCTCCAAGTTA+AGG | - | chr1.3:57326199-57326218 | MS.gene44004:intron | 45.0% | |
| TAGGGATTCGATGCAGATGA+GGG | - | chr1.3:57323413-57323432 | MS.gene44004:CDS | 45.0% | |
| TATCACCTCCACTGCAGAAA+CGG | + | chr1.3:57326582-57326601 | None:intergenic | 45.0% | |
| TCCGCAAGTAGAAAGGCTAA+AGG | + | chr1.3:57324060-57324079 | None:intergenic | 45.0% | |
| TCTAATAGCCTCGTACCGAA+TGG | - | chr1.3:57324788-57324807 | MS.gene44004:intron | 45.0% | |
| TCTTCACCTTCTTCTACTCC+GGG | - | chr1.3:57322562-57322581 | MS.gene44004:intron | 45.0% | |
| TGGCCAATGCCTATTACTCT+AGG | + | chr1.3:57324754-57324773 | None:intergenic | 45.0% | |
| TTCTTCTACTCCGGGAATCA+CGG | - | chr1.3:57322570-57322589 | MS.gene44004:intron | 45.0% | |
| TTGAGCATGAGTAGACTTGG+TGG | - | chr1.3:57326521-57326540 | MS.gene44004:intron | 45.0% | |
| ! | AGACTTTTAGCAGCATAGCG+TGG | - | chr1.3:57324250-57324269 | MS.gene44004:intron | 45.0% |
| ! | AGGCATTATGCAAAGTGCCT+TGG | + | chr1.3:57326887-57326906 | None:intergenic | 45.0% |
| ! | GGTATTACATAGGGTGTCTG+AGG | - | chr1.3:57325156-57325175 | MS.gene44004:intron | 45.0% |
| ! | GTGAATACATAGGGTGTCTG+AGG | - | chr1.3:57325255-57325274 | MS.gene44004:intron | 45.0% |
| ! | TGATGGTGAAGGTGAAGTTG+GGG | + | chr1.3:57323522-57323541 | None:intergenic | 45.0% |
| ! | TGGTTTGTCTCTTGCAGGAT+AGG | - | chr1.3:57323394-57323413 | MS.gene44004:CDS | 45.0% |
| !! | GTTGATGGTGAAGGTGAAGT+TGG | + | chr1.3:57323524-57323543 | None:intergenic | 45.0% |
| !! | AATTTATATAAAATAGATAT+TGG | - | chr1.3:57323175-57323194 | MS.gene44004:intron | 5.0% |
| AAGGTGAAGTTGGGGTTGAG+GGG | + | chr1.3:57323514-57323533 | None:intergenic | 50.0% | |
| ACCACCAACCTTGTTGATGC+TGG | + | chr1.3:57326017-57326036 | None:intergenic | 50.0% | |
| AGGGATTCGATGCAGATGAG+GGG | - | chr1.3:57323414-57323433 | MS.gene44004:CDS | 50.0% | |
| ATCACCTCCACTGCAGAAAC+GGG | + | chr1.3:57326581-57326600 | None:intergenic | 50.0% | |
| CAAAGAACCACCATGAGGTG+TGG | + | chr1.3:57322338-57322357 | None:intergenic | 50.0% | |
| CAATTAGGGTCCACACCTCA+TGG | - | chr1.3:57322325-57322344 | MS.gene44004:CDS | 50.0% | |
| CCACCAACCTTGTTGATGCT+GGG | + | chr1.3:57326016-57326035 | None:intergenic | 50.0% | |
| CCATATCCAACTCCGTTCTC+AGG | + | chr1.3:57322295-57322314 | None:intergenic | 50.0% | |
| CCTCATGGTGGTTCTTTGAG+AGG | - | chr1.3:57322340-57322359 | MS.gene44004:CDS | 50.0% | |
| CCTCTCAAAGAACCACCATG+AGG | + | chr1.3:57322343-57322362 | None:intergenic | 50.0% | |
| CCTGAGAACGGAGTTGGATA+TGG | - | chr1.3:57322292-57322311 | MS.gene44004:CDS | 50.0% | |
| CCTTCACCATCAACACCAAC+AGG | - | chr1.3:57323530-57323549 | MS.gene44004:intron | 50.0% | |
| CTCTATGATCTGTGTGCAGG+GGG | - | chr1.3:57326741-57326760 | MS.gene44004:CDS | 50.0% | |
| GAAGGTGAAGTTGGGGTTGA+GGG | + | chr1.3:57323515-57323534 | None:intergenic | 50.0% | |
| GAGAACGGAGTTGGATATGG+AGG | - | chr1.3:57322295-57322314 | MS.gene44004:CDS | 50.0% | |
| GCAGTAACAGACGCTGGATT+TGG | + | chr1.3:57325777-57325796 | None:intergenic | 50.0% | |
| GGAAGTGGCTCATTGGTGTA+TGG | + | chr1.3:57323762-57323781 | None:intergenic | 50.0% | |
| GGCAGCATCAAGATGCAACA+CGG | - | chr1.3:57322422-57322441 | MS.gene44004:CDS | 50.0% | |
| GTGATTCCCGGAGTAGAAGA+AGG | + | chr1.3:57322571-57322590 | None:intergenic | 50.0% | |
| GTTCCCAGCATCAACAAGGT+TGG | - | chr1.3:57326010-57326029 | MS.gene44004:intron | 50.0% | |
| TGAAGGTGAAGTTGGGGTTG+AGG | + | chr1.3:57323516-57323535 | None:intergenic | 50.0% | |
| TGATGTTCCCGTTTCTGCAG+TGG | - | chr1.3:57326571-57326590 | MS.gene44004:intron | 50.0% | |
| ! | CATGGTGGTTCTTTGAGAGG+AGG | - | chr1.3:57322343-57322362 | MS.gene44004:CDS | 50.0% |
| ! | CGTACAGGTTGAGCATGAGT+AGG | + | chr1.3:57323471-57323490 | None:intergenic | 50.0% |
| !! | AGGTTTGAGTGGGTTACGGA+CGG | + | chr1.3:57323783-57323802 | None:intergenic | 50.0% |
| !! | ATGAGTAGACTTGGTGGAGC+TGG | - | chr1.3:57326527-57326546 | MS.gene44004:intron | 50.0% |
| !! | CCTGTTGGTGTTGATGGTGA+AGG | + | chr1.3:57323533-57323552 | None:intergenic | 50.0% |
| AGGGGGTTGAGATTGGAGCA+TGG | + | chr1.3:57323496-57323515 | None:intergenic | 55.0% | |
| AGGTGAAGTTGGGGTTGAGG+GGG | + | chr1.3:57323513-57323532 | None:intergenic | 55.0% | |
| CCCAGCATCAACAAGGTTGG+TGG | - | chr1.3:57326013-57326032 | MS.gene44004:intron | 55.0% | |
| GAGCGCATCCGCAAGTAGAA+AGG | + | chr1.3:57324067-57324086 | None:intergenic | 55.0% | |
| GGGGGTTGAGATTGGAGCAT+GGG | + | chr1.3:57323495-57323514 | None:intergenic | 55.0% | |
| GGGGTTGAGATTGGAGCATG+GGG | + | chr1.3:57323494-57323513 | None:intergenic | 55.0% | |
| TACCCGCTCAGCAATGCTGT+GGG | + | chr1.3:57325862-57325881 | None:intergenic | 55.0% | |
| TACGGACGGAAGTGGCTCAT+TGG | + | chr1.3:57323769-57323788 | None:intergenic | 55.0% | |
| TATGATCTGTGTGCAGGGGG+AGG | - | chr1.3:57326744-57326763 | MS.gene44004:CDS | 55.0% | |
| TGATGGTCCCATTCGGTACG+AGG | + | chr1.3:57324799-57324818 | None:intergenic | 55.0% | |
| TGGAACCAACCAGCAAGCCT+GGG | - | chr1.3:57326777-57326796 | MS.gene44004:CDS | 55.0% | |
| TGTTCCCGTTTCTGCAGTGG+AGG | - | chr1.3:57326574-57326593 | MS.gene44004:intron | 55.0% | |
| TTACCCGCTCAGCAATGCTG+TGG | + | chr1.3:57325863-57325882 | None:intergenic | 55.0% | |
| TTAGGGTCCACACCTCATGG+TGG | - | chr1.3:57322328-57322347 | MS.gene44004:CDS | 55.0% | |
| TTCTTGCTCGCACTCGAGGA+CGG | + | chr1.3:57325821-57325840 | None:intergenic | 55.0% | |
| ! | CAGACGCTGGATTTGGTTGC+TGG | + | chr1.3:57325770-57325789 | None:intergenic | 55.0% |
| ! | GGTGGTTCTTTGAGAGGAGG+AGG | - | chr1.3:57322346-57322365 | MS.gene44004:CDS | 55.0% |
| ! | GGTTCTTTGAGAGGAGGAGG+AGG | - | chr1.3:57322349-57322368 | MS.gene44004:CDS | 55.0% |
| ACCCCCACAGCATTGCTGAG+CGG | - | chr1.3:57325856-57325875 | MS.gene44004:intron | 60.0% | |
| ACCCGCTCAGCAATGCTGTG+GGG | + | chr1.3:57325861-57325880 | None:intergenic | 60.0% | |
| ACTGCCATGCCACAACCACC+TGG | - | chr1.3:57325792-57325811 | MS.gene44004:CDS | 60.0% | |
| AGCAATGCTGTGGGGGTCTG+TGG | + | chr1.3:57325853-57325872 | None:intergenic | 60.0% | |
| ATCGTTCGACCACTTCGCCC+AGG | + | chr1.3:57326797-57326816 | None:intergenic | 60.0% | |
| CAGGGGGAGGACATAGAAGG+TGG | - | chr1.3:57326757-57326776 | MS.gene44004:CDS | 60.0% | |
| CCTCGAGTGCGAGCAAGAAG+AGG | - | chr1.3:57325822-57325841 | MS.gene44004:intron | 60.0% | |
| CCTCTTCTTGCTCGCACTCG+AGG | + | chr1.3:57325825-57325844 | None:intergenic | 60.0% | |
| GATGCCAGGTGGTTGTGGCA+TGG | + | chr1.3:57325799-57325818 | None:intergenic | 60.0% | |
| GATTGGAGCATGGGGCGTAC+AGG | + | chr1.3:57323486-57323505 | None:intergenic | 60.0% | |
| GCAGTGCCTGAGAACGGAGT+TGG | - | chr1.3:57322286-57322305 | MS.gene44004:CDS | 60.0% | |
| GGCATGGCAGTAACAGACGC+TGG | + | chr1.3:57325783-57325802 | None:intergenic | 60.0% | |
| GGGGTTGAGGGGGTTGAGAT+TGG | + | chr1.3:57323503-57323522 | None:intergenic | 60.0% | |
| GTGCAGGGGGAGGACATAGA+AGG | - | chr1.3:57326754-57326773 | MS.gene44004:CDS | 60.0% | |
| GTGGAACCAACCAGCAAGCC+TGG | - | chr1.3:57326776-57326795 | MS.gene44004:CDS | 60.0% | |
| TGGGCGAAGTGGTCGAACGA+TGG | - | chr1.3:57326796-57326815 | MS.gene44004:CDS | 60.0% | |
| !! | GAGTGGGTTACGGACGGAAG+TGG | + | chr1.3:57323777-57323796 | None:intergenic | 60.0% |
| ACCACTTCGCCCAGGCTTGC+TGG | + | chr1.3:57326789-57326808 | None:intergenic | 65.0% | |
| ACCAGCAAGCCTGGGCGAAG+TGG | - | chr1.3:57326785-57326804 | MS.gene44004:CDS | 65.0% | |
| ACTCGAGGACGGATGCCAGG+TGG | + | chr1.3:57325810-57325829 | None:intergenic | 65.0% | |
| CCCCCACAGCATTGCTGAGC+GGG | - | chr1.3:57325857-57325876 | MS.gene44004:intron | 65.0% | |
| CCCGCTCAGCAATGCTGTGG+GGG | + | chr1.3:57325860-57325879 | None:intergenic | 65.0% | |
| GGACGGATGCCAGGTGGTTG+TGG | + | chr1.3:57325804-57325823 | None:intergenic | 65.0% | |
| TGCTGTGGGGGTCTGTGGCT+TGG | + | chr1.3:57325848-57325867 | None:intergenic | 65.0% | |
| !! | CTTCGCCCAGGCTTGCTGGT+TGG | + | chr1.3:57326785-57326804 | None:intergenic | 65.0% |
| CGCACTCGAGGACGGATGCC+AGG | + | chr1.3:57325813-57325832 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 57322232 | 57326990 | 57322232 | ID=MS.gene44004 |
| chr1.3 | mRNA | 57322232 | 57326990 | 57322232 | ID=MS.gene44004.t1;Parent=MS.gene44004 |
| chr1.3 | exon | 57326631 | 57326990 | 57326631 | ID=MS.gene44004.t1.exon1;Parent=MS.gene44004.t1 |
| chr1.3 | CDS | 57326631 | 57326990 | 57326631 | ID=cds.MS.gene44004.t1;Parent=MS.gene44004.t1 |
| chr1.3 | exon | 57325671 | 57325811 | 57325671 | ID=MS.gene44004.t1.exon2;Parent=MS.gene44004.t1 |
| chr1.3 | CDS | 57325671 | 57325811 | 57325671 | ID=cds.MS.gene44004.t1;Parent=MS.gene44004.t1 |
| chr1.3 | exon | 57323344 | 57323466 | 57323344 | ID=MS.gene44004.t1.exon3;Parent=MS.gene44004.t1 |
| chr1.3 | CDS | 57323344 | 57323466 | 57323344 | ID=cds.MS.gene44004.t1;Parent=MS.gene44004.t1 |
| chr1.3 | exon | 57323195 | 57323260 | 57323195 | ID=MS.gene44004.t1.exon4;Parent=MS.gene44004.t1 |
| chr1.3 | CDS | 57323195 | 57323260 | 57323195 | ID=cds.MS.gene44004.t1;Parent=MS.gene44004.t1 |
| chr1.3 | exon | 57323002 | 57323067 | 57323002 | ID=MS.gene44004.t1.exon5;Parent=MS.gene44004.t1 |
| chr1.3 | CDS | 57323002 | 57323067 | 57323002 | ID=cds.MS.gene44004.t1;Parent=MS.gene44004.t1 |
| chr1.3 | exon | 57322627 | 57322704 | 57322627 | ID=MS.gene44004.t1.exon6;Parent=MS.gene44004.t1 |
| chr1.3 | CDS | 57322627 | 57322704 | 57322627 | ID=cds.MS.gene44004.t1;Parent=MS.gene44004.t1 |
| chr1.3 | exon | 57322232 | 57322462 | 57322232 | ID=MS.gene44004.t1.exon7;Parent=MS.gene44004.t1 |
| chr1.3 | CDS | 57322232 | 57322462 | 57322232 | ID=cds.MS.gene44004.t1;Parent=MS.gene44004.t1 |
| Gene Sequence |
| Protein sequence |
