AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44074

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44074.t1 MTR_1g082550 94.920 374 17 2 1 373 1 373 0.0 690
MS.gene44074.t1 MTR_7g113800 63.897 349 105 9 32 373 27 361 2.23e-149 426
MS.gene44074.t1 MTR_3g099650 42.679 321 164 8 47 357 58 368 2.83e-70 225
MS.gene44074.t1 MTR_5g064990 38.788 330 186 6 43 368 59 376 4.05e-59 196
MS.gene44074.t1 MTR_5g064980 43.463 283 139 7 47 309 53 334 1.00e-58 195
MS.gene44074.t1 MTR_6g055030 35.714 280 171 4 1 280 6 276 2.81e-47 163
MS.gene44074.t1 MTR_3g086730 36.574 216 114 7 48 262 1 194 3.01e-36 132
MS.gene44074.t1 MTR_3g086700 32.877 219 116 4 48 266 1 188 2.29e-35 128
MS.gene44074.t1 MTR_6g055030 31.071 280 153 5 1 280 6 245 3.91e-31 120
MS.gene44074.t1 MTR_3g110190 42.308 130 67 3 44 168 8 134 8.04e-30 117
MS.gene44074.t1 MTR_5g076990 36.207 232 126 8 53 272 39 260 1.58e-29 116
MS.gene44074.t1 MTR_8g066740 37.083 240 121 9 48 272 35 259 1.07e-28 114
MS.gene44074.t1 MTR_2g055790 40.000 145 70 3 30 174 21 148 3.13e-28 109
MS.gene44074.t1 MTR_6g087150 31.776 214 122 7 10 212 8 208 2.37e-26 108
MS.gene44074.t1 MTR_4g106680 36.747 166 85 4 22 171 16 177 2.80e-26 107
MS.gene44074.t1 MTR_4g120270 47.423 97 45 2 95 190 78 169 1.86e-23 98.6
MS.gene44074.t1 MTR_2g436100 57.692 78 30 1 96 173 92 166 3.29e-23 98.6
MS.gene44074.t1 MTR_5g066250 39.695 131 73 3 46 174 82 208 4.83e-23 100
MS.gene44074.t1 MTR_5g064890 36.416 173 75 6 32 172 31 200 9.66e-23 98.2
MS.gene44074.t1 MTR_4g129420 41.176 136 72 2 43 172 57 190 1.49e-22 99.4
MS.gene44074.t1 MTR_3g100400 50.000 82 38 1 93 174 126 204 1.98e-22 98.2
MS.gene44074.t1 MTR_1g100737 43.158 95 50 2 81 171 74 168 3.37e-22 93.2
MS.gene44074.t1 MTR_5g034790 36.184 152 74 4 42 174 43 190 3.31e-21 94.0
MS.gene44074.t1 MTR_1g043410 33.333 147 82 3 34 168 23 165 1.98e-20 91.3
MS.gene44074.t1 MTR_2g090950 38.614 101 59 1 94 191 88 188 2.22e-20 89.4
MS.gene44074.t1 MTR_7g116220 32.867 143 86 2 42 174 5 147 4.23e-20 87.0
MS.gene44074.t1 MTR_8g009190 31.646 158 102 2 44 196 19 175 4.82e-20 90.1
MS.gene44074.t1 MTR_8g093010 34.722 144 83 5 32 172 45 180 7.59e-20 87.4
MS.gene44074.t1 MTR_1g074190 48.101 79 38 1 96 171 98 176 8.20e-20 89.7
MS.gene44074.t1 MTR_3g094000 32.919 161 87 5 30 175 14 168 1.04e-19 85.9
MS.gene44074.t1 MTR_3g464780 46.988 83 43 1 91 172 96 178 1.09e-19 87.8
MS.gene44074.t1 MTR_6g007737 34.266 143 76 4 43 171 66 204 1.53e-19 89.4
MS.gene44074.t1 MTR_5g030010 33.333 141 77 3 45 171 56 193 1.98e-19 89.0
MS.gene44074.t1 MTR_7g117540 35.099 151 79 3 30 171 6 146 3.18e-19 87.4
MS.gene44074.t1 MTR_2g009310 52.439 82 30 2 97 175 135 210 3.78e-19 88.6
MS.gene44074.t1 MTR_8g066780 32.168 143 88 4 45 180 56 196 1.47e-18 86.3
MS.gene44074.t1 MTR_8g089880 48.148 81 39 2 97 177 127 204 1.71e-18 84.7
MS.gene44074.t1 MTR_1g090480 30.282 142 92 3 34 173 13 149 1.78e-18 82.4
MS.gene44074.t1 MTR_1g056350 39.241 79 48 0 97 175 74 152 2.40e-18 82.0
MS.gene44074.t1 MTR_4g093830 43.878 98 52 2 97 194 126 220 3.56e-18 85.1
MS.gene44074.t1 MTR_8g092840 32.653 147 88 5 33 172 44 186 4.09e-18 82.8
MS.gene44074.t1 MTR_2g090905 41.250 80 44 1 98 174 40 119 4.76e-18 80.1
MS.gene44074.t1 MTR_4g056590 44.156 77 37 1 96 172 99 169 5.48e-18 81.6
MS.gene44074.t1 MTR_8g092960 30.323 155 105 2 19 172 24 176 7.09e-18 82.0
MS.gene44074.t1 MTR_8g063660 48.684 76 34 2 97 171 68 139 1.18e-17 83.6
MS.gene44074.t1 MTR_8g073120 34.043 141 68 5 38 169 17 141 1.56e-17 80.5
MS.gene44074.t1 MTR_7g073200 34.839 155 83 7 35 182 19 162 1.62e-17 80.1
MS.gene44074.t1 MTR_5g024730 32.031 128 66 4 48 168 34 147 2.18e-17 80.5
MS.gene44074.t1 MTR_5g026720 31.447 159 88 6 31 180 1 147 2.31e-17 79.0
MS.gene44074.t1 MTR_1g070140 31.159 138 81 5 46 171 40 175 2.71e-17 82.4
MS.gene44074.t1 MTR_2g044570 45.833 72 39 0 106 177 63 134 3.03e-17 81.6
MS.gene44074.t1 MTR_5g026730 32.192 146 85 4 38 175 4 143 3.05e-17 79.0
MS.gene44074.t1 MTR_8g092930 31.034 145 94 3 32 172 43 185 5.94e-17 79.3
MS.gene44074.t1 MTR_3g091620 46.053 76 38 1 97 172 101 173 6.04e-17 81.6
MS.gene44074.t1 MTR_7g116180 44.872 78 43 0 94 171 64 141 6.60e-17 78.2
MS.gene44074.t1 MTR_1g070425 44.872 78 43 0 94 171 65 142 1.00e-16 77.8
MS.gene44074.t1 MTR_8g023400 47.368 76 35 2 97 172 92 162 1.23e-16 80.5
MS.gene44074.t1 MTR_3g095560 31.973 147 86 6 48 190 63 199 1.85e-16 78.6
MS.gene44074.t1 MTR_1g492830 32.278 158 88 6 47 187 3 158 2.12e-16 77.8
MS.gene44074.t1 MTR_3g071300 27.344 128 92 1 50 176 29 156 2.18e-16 76.6
MS.gene44074.t1 MTR_6g007680 31.496 127 76 3 53 179 4 119 2.62e-16 75.9
MS.gene44074.t1 MTR_5g092790 40.541 74 43 1 95 168 155 227 3.49e-16 77.4
MS.gene44074.t1 MTR_4g063070 35.052 97 52 2 76 172 297 382 4.01e-16 79.7
MS.gene44074.t1 MTR_7g079280 39.024 82 49 1 94 175 77 157 4.61e-16 75.9
MS.gene44074.t1 MTR_8g092985 29.371 143 97 2 32 172 44 184 4.75e-16 76.6
MS.gene44074.t1 MTR_5g082940 33.913 115 65 3 58 171 44 148 6.40e-16 75.1
MS.gene44074.t1 MTR_3g012550 31.387 137 83 5 47 175 24 157 6.68e-16 75.5
MS.gene44074.t1 MTR_5g071930 41.860 86 41 2 96 181 65 141 6.80e-16 75.9
MS.gene44074.t1 MTR_8g071815 40.217 92 54 1 123 214 87 177 1.12e-15 74.7
MS.gene44074.t1 MTR_7g096690 30.147 136 80 4 48 171 13 145 1.51e-15 77.0
MS.gene44074.t1 MTR_8g092970 32.414 145 84 5 32 172 43 177 1.90e-15 75.1
MS.gene44074.t1 MTR_8g032690 39.130 92 54 2 126 217 19 108 2.22e-15 72.0
MS.gene44074.t1 MTR_5g092750 37.975 79 48 1 94 172 154 231 2.33e-15 75.1
MS.gene44074.t1 MTR_7g079290 36.145 83 52 1 92 173 120 202 3.11e-15 74.3
MS.gene44074.t1 MTR_3g078450 44.156 77 42 1 95 171 74 149 4.54e-15 73.9
MS.gene44074.t1 MTR_1g090460 40.789 76 44 1 105 179 73 148 4.83e-15 72.4
MS.gene44074.t1 MTR_7g108855 40.789 76 44 1 98 173 67 141 5.51e-15 73.2
MS.gene44074.t1 MTR_7g076250 31.746 126 81 3 97 220 63 185 1.20e-14 72.0
MS.gene44074.t1 MTR_2g096350 38.889 72 43 1 98 169 108 178 1.42e-14 72.8
MS.gene44074.t1 MTR_8g028465 40.506 79 42 2 97 175 90 163 1.68e-14 72.0
MS.gene44074.t1 MTR_2g041200 34.921 126 77 4 51 173 33 156 1.68e-14 71.6
MS.gene44074.t1 MTR_3g078470 44.156 77 42 1 95 171 74 149 1.76e-14 72.4
MS.gene44074.t1 MTR_8g019710 34.483 116 64 4 94 207 27 132 1.80e-14 70.5
MS.gene44074.t1 MTR_4g030070 33.019 106 67 1 97 202 85 186 1.90e-14 72.4
MS.gene44074.t1 MTR_3g086680 47.887 71 26 3 107 169 22 89 2.04e-14 69.3
MS.gene44074.t1 MTR_3g081030 45.070 71 39 0 126 196 119 189 2.07e-14 72.0
MS.gene44074.t1 MTR_3g116000 31.915 141 82 4 48 183 30 161 2.18e-14 71.6
MS.gene44074.t1 MTR_2g035800 30.882 136 86 4 47 182 29 156 5.41e-14 69.7
MS.gene44074.t1 MTR_7g116200 36.957 92 52 2 79 169 50 136 5.89e-14 69.7
MS.gene44074.t1 MTR_3g114500 50.000 64 28 2 115 174 56 119 1.04e-13 67.8
MS.gene44074.t1 MTR_5g022920 38.462 78 47 1 94 171 158 234 1.39e-13 70.1
MS.gene44074.t1 MTR_8g092990 43.478 69 33 2 106 172 123 187 2.71e-13 69.3
MS.gene44074.t1 MTR_8g099515 42.667 75 40 2 95 168 307 379 3.88e-13 70.5
MS.gene44074.t1 MTR_4g022410 33.065 124 73 3 48 171 45 158 6.68e-13 67.0
MS.gene44074.t1 MTR_8g027745 54.000 50 23 0 126 175 314 363 7.55e-13 69.3
MS.gene44074.t1 MTR_7g117350 38.947 95 53 3 93 184 286 378 8.55e-13 69.3
MS.gene44074.t1 MTR_1g026070 53.061 49 23 0 125 173 70 118 9.36e-13 65.1
MS.gene44074.t1 MTR_7g117350 38.947 95 53 3 93 184 278 370 9.71e-13 69.3
MS.gene44074.t1 MTR_5g009200 43.590 78 31 2 97 168 322 392 1.29e-12 68.9
MS.gene44074.t1 MTR_7g116210 40.506 79 41 2 92 169 5 78 1.36e-12 64.3
MS.gene44074.t1 MTR_6g007670 33.333 93 55 3 87 179 1 86 2.95e-12 66.6
MS.gene44074.t1 MTR_8g072020 38.356 73 41 3 101 172 422 491 3.47e-12 68.2
MS.gene44074.t1 MTR_8g072020 38.356 73 41 3 101 172 383 452 3.50e-12 67.8
MS.gene44074.t1 MTR_5g009210 43.590 78 31 2 97 168 287 357 4.31e-12 67.0
MS.gene44074.t1 MTR_2g079320 37.313 67 40 1 107 171 138 204 4.70e-12 65.1
MS.gene44074.t1 MTR_3g091200 38.356 73 44 1 97 169 303 374 6.30e-12 66.6
MS.gene44074.t1 MTR_5g009190 42.308 78 32 2 97 168 266 336 1.04e-11 65.9
MS.gene44074.t1 MTR_4g094725 29.752 121 78 2 48 168 35 148 1.07e-11 62.8
MS.gene44074.t1 MTR_4g108830 47.826 46 24 0 126 171 146 191 1.12e-11 63.5
MS.gene44074.t1 MTR_8g098770 40.299 67 39 1 113 178 73 139 1.19e-11 62.8
MS.gene44074.t1 MTR_3g087900 50.000 50 23 2 125 173 68 116 1.22e-11 62.8
MS.gene44074.t1 MTR_8g027980 39.437 71 39 2 103 171 96 164 1.29e-11 64.7
MS.gene44074.t1 MTR_4g108830 47.826 46 24 0 126 171 174 219 1.36e-11 63.9
MS.gene44074.t1 MTR_4g077570 45.283 53 25 2 124 173 9 60 1.46e-11 60.5
MS.gene44074.t1 MTR_7g059360 36.842 76 47 1 103 178 136 210 1.58e-11 63.9
MS.gene44074.t1 MTR_8g074900 51.111 45 22 0 124 168 178 222 2.54e-11 63.2
MS.gene44074.t1 MTR_3g078120 34.409 93 53 2 77 169 44 128 2.72e-11 61.6
MS.gene44074.t1 MTR_8g099495 38.158 76 38 2 97 168 319 389 2.74e-11 65.1
MS.gene44074.t1 MTR_5g010100 46.000 50 26 1 126 174 81 130 3.14e-11 60.8
MS.gene44074.t1 MTR_1g090450 31.200 125 77 4 51 168 27 149 4.94e-11 60.8
MS.gene44074.t1 MTR_3g078540 37.349 83 48 2 89 169 42 122 5.73e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44074.t1 AT3G05200 48.851 348 145 11 16 358 15 334 1.67e-90 278
MS.gene44074.t1 AT1G72200 41.643 353 175 12 24 366 37 368 2.11e-75 239
MS.gene44074.t1 AT5G27420 44.225 355 123 12 39 358 36 350 6.19e-75 236
MS.gene44074.t1 AT1G22500 39.474 342 188 8 37 372 28 356 1.37e-66 216
MS.gene44074.t1 AT1G35330 39.172 314 168 9 11 314 9 309 2.13e-53 179
MS.gene44074.t1 AT4G40070 37.931 319 148 13 45 354 43 320 2.34e-53 179
MS.gene44074.t1 AT4G09120 42.667 300 133 13 51 345 51 316 2.83e-53 180
MS.gene44074.t1 AT4G09130 38.558 319 162 9 11 318 12 307 1.05e-50 173
MS.gene44074.t1 AT2G35000 42.449 245 116 8 48 277 51 285 1.66e-50 174
MS.gene44074.t1 AT2G34990 42.041 245 105 8 43 276 9 227 5.64e-49 167
MS.gene44074.t1 AT2G34990 42.041 245 105 8 43 276 31 249 6.88e-49 168
MS.gene44074.t1 AT4G09110 36.364 253 89 6 93 345 90 270 4.54e-40 144
MS.gene44074.t1 AT4G17920 31.469 286 167 8 44 315 19 289 1.16e-36 134
MS.gene44074.t1 AT5G46650 33.205 259 141 7 33 276 8 249 4.26e-36 133
MS.gene44074.t1 AT4G09100 56.098 82 36 0 92 173 51 132 2.35e-27 105
MS.gene44074.t1 AT2G27940 36.364 143 71 3 44 170 46 184 2.66e-27 108
MS.gene44074.t1 AT2G20030 41.096 146 71 5 46 181 39 179 1.94e-25 106
MS.gene44074.t1 AT5G05810 35.570 149 80 2 39 174 49 194 1.41e-24 104
MS.gene44074.t1 AT3G16720 35.632 174 88 4 25 184 9 172 7.89e-24 100
MS.gene44074.t1 AT4G28890 33.333 180 99 5 17 179 1 176 6.44e-23 99.8
MS.gene44074.t1 AT1G23980 35.616 146 75 3 42 171 47 189 2.46e-22 97.4
MS.gene44074.t1 AT2G18650 40.708 113 65 1 60 172 62 172 4.24e-22 97.4
MS.gene44074.t1 AT5G40250 27.244 312 170 10 42 322 39 324 4.36e-22 96.7
MS.gene44074.t1 AT2G35420 33.333 228 99 10 45 256 18 208 6.43e-22 94.0
MS.gene44074.t1 AT5G17600 36.641 131 65 4 51 169 61 185 1.22e-21 95.5
MS.gene44074.t1 AT1G04360 33.333 144 72 3 46 171 42 179 1.04e-20 92.8
MS.gene44074.t1 AT4G17905 31.548 168 85 5 44 188 58 218 1.21e-20 91.7
MS.gene44074.t1 AT4G17905 31.548 168 85 5 44 188 84 244 2.11e-20 91.3
MS.gene44074.t1 AT1G72220 39.855 138 61 6 51 172 92 223 2.61e-20 92.0
MS.gene44074.t1 AT3G62690 33.880 183 100 6 33 206 14 184 2.83e-20 89.7
MS.gene44074.t1 AT5G43420 29.902 204 115 5 46 223 35 236 8.04e-20 90.1
MS.gene44074.t1 AT4G15975 46.250 80 39 1 97 176 51 126 9.39e-20 87.8
MS.gene44074.t1 AT1G32361 36.145 166 84 7 97 255 130 280 1.11e-19 89.4
MS.gene44074.t1 AT4G30400 52.778 72 32 1 97 168 107 176 2.32e-19 89.7
MS.gene44074.t1 AT3G18930 49.425 87 37 2 97 176 120 206 3.95e-19 88.6
MS.gene44074.t1 AT3G18930 49.425 87 37 2 97 176 120 206 3.95e-19 88.6
MS.gene44074.t1 AT3G18930 49.425 87 37 2 97 176 120 206 3.95e-19 88.6
MS.gene44074.t1 AT4G33565 53.947 76 32 2 97 172 191 263 4.42e-19 88.2
MS.gene44074.t1 AT2G42360 33.871 124 74 2 52 175 42 157 4.76e-19 85.9
MS.gene44074.t1 AT5G05280 32.192 146 75 5 36 172 29 159 7.99e-19 83.6
MS.gene44074.t1 AT3G48030 49.333 75 36 1 97 171 102 174 9.56e-19 85.5
MS.gene44074.t1 AT4G10150 34.228 149 83 5 36 175 18 160 1.10e-18 84.7
MS.gene44074.t1 AT3G48030 49.333 75 36 1 97 171 180 252 1.13e-18 86.7
MS.gene44074.t1 AT1G49200 29.730 185 109 6 39 220 50 216 2.65e-18 83.6
MS.gene44074.t1 AT3G10910 34.161 161 84 6 26 172 8 160 2.88e-18 82.0
MS.gene44074.t1 AT3G03550 31.788 151 76 3 46 172 58 205 3.40e-18 85.5
MS.gene44074.t1 AT5G10380 44.340 106 44 5 97 197 109 204 5.55e-18 84.0
MS.gene44074.t1 AT4G10160 34.646 127 75 3 52 175 25 146 6.50e-18 82.4
MS.gene44074.t1 AT5G01880 43.137 102 48 4 71 172 60 151 7.26e-18 80.5
MS.gene44074.t1 AT3G18773 27.941 204 123 7 21 220 27 210 8.27e-18 82.0
MS.gene44074.t1 AT2G42350 48.718 78 36 2 96 173 74 147 8.62e-18 81.6
MS.gene44074.t1 AT5G57750 32.374 139 78 4 44 170 32 166 1.03e-17 81.3
MS.gene44074.t1 AT2G46493 37.097 124 75 2 47 168 58 180 1.58e-17 80.1
MS.gene44074.t1 AT1G49230 30.556 180 107 7 42 220 50 212 2.72e-17 80.5
MS.gene44074.t1 AT3G60220 47.222 72 38 0 100 171 91 162 6.60e-17 81.3
MS.gene44074.t1 AT1G76410 36.220 127 75 4 48 172 28 150 6.78e-17 78.6
MS.gene44074.t1 AT2G47560 34.000 150 93 4 26 173 10 155 7.04e-17 79.3
MS.gene44074.t1 AT1G49220 30.000 190 115 7 39 225 49 223 7.80e-17 79.7
MS.gene44074.t1 AT5G07040 31.008 129 84 3 47 174 18 142 2.33e-16 76.3
MS.gene44074.t1 AT1G49210 34.127 126 65 3 96 220 107 215 3.09e-16 77.4
MS.gene44074.t1 AT2G25410 38.542 96 57 2 80 173 279 374 3.11e-16 79.7
MS.gene44074.t1 AT2G34000 36.441 118 68 3 53 168 21 133 4.14e-16 75.5
MS.gene44074.t1 AT1G53820 37.647 85 48 2 97 181 95 174 1.59e-15 77.0
MS.gene44074.t1 AT5G53110 39.167 120 62 5 57 168 256 372 2.59e-15 77.0
MS.gene44074.t1 AT1G20823 31.973 147 79 6 38 172 20 157 2.69e-15 74.3
MS.gene44074.t1 AT3G14320 44.444 72 36 1 97 168 63 130 3.39e-15 73.9
MS.gene44074.t1 AT1G72310 42.500 80 42 1 97 172 94 173 3.42e-15 76.3
MS.gene44074.t1 AT2G17450 32.061 131 75 4 48 173 28 149 3.93e-15 73.6
MS.gene44074.t1 AT1G28040 44.444 72 39 1 97 168 225 295 4.04e-15 75.5
MS.gene44074.t1 AT2G46494 43.038 79 44 1 90 168 281 358 4.19e-15 76.3
MS.gene44074.t1 AT5G06490 35.714 84 50 1 97 176 96 179 5.76e-15 73.2
MS.gene44074.t1 AT3G61550 36.458 96 51 2 97 183 99 193 6.57e-15 73.6
MS.gene44074.t1 AT2G46160 41.667 84 44 1 97 175 104 187 6.67e-15 73.6
MS.gene44074.t1 AT2G46160 41.667 84 44 1 97 175 104 187 6.67e-15 73.6
MS.gene44074.t1 AT2G35910 41.772 79 43 1 97 175 121 196 1.07e-14 73.2
MS.gene44074.t1 AT2G46495 33.099 142 89 4 38 176 230 368 1.13e-14 75.1
MS.gene44074.t1 AT2G46495 38.144 97 57 2 81 176 246 340 2.86e-14 73.6
MS.gene44074.t1 AT5G58580 30.709 127 86 1 88 214 102 226 3.06e-14 73.2
MS.gene44074.t1 AT5G42200 57.143 49 21 0 125 173 103 151 3.74e-14 70.1
MS.gene44074.t1 AT4G35480 51.852 54 26 0 120 173 107 160 4.60e-14 70.9
MS.gene44074.t1 AT1G33480 39.474 76 44 1 125 198 99 174 5.08e-14 72.0
MS.gene44074.t1 AT5G47610 37.975 79 47 1 100 178 83 159 2.24e-13 68.2
MS.gene44074.t1 AT3G11110 25.899 139 100 2 33 171 17 152 2.25e-13 67.8
MS.gene44074.t1 AT1G74410 36.486 74 44 1 95 168 148 218 1.04e-12 67.4
MS.gene44074.t1 AT4G35840 37.647 85 39 2 94 171 159 236 1.05e-12 67.8
MS.gene44074.t1 AT5G66070 44.828 58 32 0 114 171 164 221 1.15e-12 67.4
MS.gene44074.t1 AT5G66070 44.828 58 32 0 114 171 164 221 1.15e-12 67.4
MS.gene44074.t1 AT3G19140 37.662 77 44 1 95 171 52 124 1.73e-12 64.7
MS.gene44074.t1 AT5G66070 44.828 58 32 0 114 171 188 245 1.77e-12 67.0
MS.gene44074.t1 AT3G60966 50.943 53 26 0 126 178 62 114 2.28e-12 64.3
MS.gene44074.t1 AT4G17245 33.607 122 76 4 57 177 37 154 6.32e-12 63.9
MS.gene44074.t1 AT2G18670 32.967 91 54 2 92 177 78 166 7.71e-12 63.9
MS.gene44074.t1 AT3G20395 40.789 76 40 3 96 171 146 216 8.52e-12 64.7
MS.gene44074.t1 AT2G17730 33.333 78 52 0 94 171 164 241 1.03e-11 64.7
MS.gene44074.t1 AT1G35625 31.343 134 76 7 48 179 165 284 1.44e-11 65.5
MS.gene44074.t1 AT4G24015 54.348 46 21 0 126 171 105 150 1.58e-11 62.8
MS.gene44074.t1 AT5G36001 53.488 43 20 0 126 168 264 306 1.72e-11 65.1
MS.gene44074.t1 AT2G44578 48.000 50 26 0 126 175 70 119 2.77e-11 61.6
MS.gene44074.t1 AT3G30460 34.343 99 59 4 79 176 90 183 2.87e-11 62.4
MS.gene44074.t1 AT3G30460 34.343 99 59 4 79 176 54 147 3.12e-11 61.2
MS.gene44074.t1 AT1G53010 48.936 47 24 0 125 171 129 175 3.57e-11 62.0
MS.gene44074.t1 AT5G41400 36.232 69 42 1 106 172 85 153 4.02e-11 61.6
MS.gene44074.t1 AT1G26800 41.176 68 38 2 112 179 99 164 4.97e-11 62.0
MS.gene44074.t1 AT4G30370 36.111 72 43 1 97 168 89 157 5.85e-11 61.2

Find 112 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGGTTTGCAGAGCTAATT+TGG 0.212949 1.3:+58122438 MS.gene44074:CDS
CTTCTAGCTCTATGTAATTC+CGG 0.266296 1.3:-58122787 None:intergenic
AGCTAATTTGGTTCCTCAAC+CGG 0.306735 1.3:+58122450 MS.gene44074:CDS
CGGTCATTCGGTGGTTCAAC+CGG 0.317157 1.3:+58122696 MS.gene44074:CDS
GTGAACCTCTTGTACGGTTC+CGG 0.356534 1.3:-58122633 None:intergenic
TACGGTTCCGGTTCAGCGTC+TGG 0.359258 1.3:-58122621 None:intergenic
TTCTAGCTCTATGTAATTCC+GGG 0.363125 1.3:-58122786 None:intergenic
GTCTGTAAGGCGGTTGGACC+GGG 0.367584 1.3:+58122888 MS.gene44074:CDS
AGTCTGTAAGGCGGTTGGAC+CGG 0.371626 1.3:+58122887 MS.gene44074:CDS
TGGCTTACAGTCAACACTTC+TGG 0.379879 1.3:-58122601 None:intergenic
AGCTTCAATATCTTGTGGTT+CGG 0.385992 1.3:-58122506 None:intergenic
CCAAGGGTGGCTAGTAGCTC+TGG 0.421442 1.3:+58122982 MS.gene44074:CDS
CACAGTCTGGTAGGCTTCGT+TGG 0.428411 1.3:+58122653 MS.gene44074:CDS
GACAATTAAACCGGTGGCCG+CGG 0.428720 1.3:-58123051 None:intergenic
GTCTCACTCGACCGGTCATT+CGG 0.429376 1.3:+58122684 MS.gene44074:CDS
TTCTCCGGCGTCCCCTTCGC+CGG 0.431079 1.3:+58122010 MS.gene44074:CDS
CTGTAAGCCAGACGCTGAAC+CGG 0.432316 1.3:+58122614 MS.gene44074:CDS
GTTGGATTGTGCTCCGGCGA+AGG 0.435306 1.3:-58122023 None:intergenic
TTGGATTGTGCTCCGGCGAA+GGG 0.440848 1.3:-58122022 None:intergenic
GCTGTGAAGATTCATAAAAT+CGG 0.441212 1.3:+58122283 MS.gene44074:CDS
CGGTTCTCATACCACTTGTC+CGG 0.441794 1.3:+58122420 MS.gene44074:CDS
CGTACAAGAGGTTCACAGTC+TGG 0.444556 1.3:+58122640 MS.gene44074:CDS
GGTTCCTCAACCGGGTGAAT+CGG 0.448219 1.3:+58122459 MS.gene44074:CDS
ACCCTGAGTGTATTGATGAA+TGG 0.454351 1.3:+58122395 MS.gene44074:CDS
ACACTGAACGGTTCACTTTG+AGG 0.456031 1.3:+58122725 MS.gene44074:CDS
TGTTGACTCCCCGCGGCCAC+CGG 0.459445 1.3:+58123041 MS.gene44074:CDS
ATTTGTTTCCTCACTTCAAC+CGG 0.460725 1.3:-58122751 None:intergenic
ACAATTAAACCGGTGGCCGC+GGG 0.470750 1.3:-58123050 None:intergenic
TCATCGACGACGCTCTTACA+AGG 0.474117 1.3:-58122954 None:intergenic
GTAGTAGAGGGAAGTCTGTA+AGG 0.476128 1.3:+58122875 MS.gene44074:CDS
ACCAAATTAGCTCTGCAAAC+CGG 0.481146 1.3:-58122439 None:intergenic
AAGATTCATAAAATCGGAAA+AGG 0.498603 1.3:+58122289 MS.gene44074:CDS
TGCTTCAGCAGCTACGGCGG+CGG 0.499866 1.3:+58123017 MS.gene44074:CDS
TGCCATGTTGCGTATGCTGT+TGG 0.500893 1.3:-58122176 None:intergenic
ACGGTTCACTTTGAGGCTAC+CGG 0.501722 1.3:+58122732 MS.gene44074:CDS
AGGGGTTATCGAACCGGTGG+TGG 0.502322 1.3:+58122844 MS.gene44074:CDS
GCTAATTTGGTTCCTCAACC+GGG 0.505025 1.3:+58122451 MS.gene44074:CDS
GTGGTTCGGTATTAATCGAC+GGG 0.509943 1.3:-58122492 None:intergenic
TCAAAACGAAGCTGTTGAAT+CGG 0.511719 1.3:+58122528 MS.gene44074:CDS
ACTACTTCCTTCACCACCAC+CGG 0.514270 1.3:-58122857 None:intergenic
ACAGCTGAGTATTCAAAGAT+CGG 0.516546 1.3:-58122265 None:intergenic
TCACGGAGGGGTTATCGAAC+CGG 0.519162 1.3:+58122838 MS.gene44074:CDS
CAGCTGAGTATTCAAAGATC+GGG 0.520772 1.3:-58122264 None:intergenic
TATCGAACCGGTGGTGGTGA+AGG 0.528546 1.3:+58122850 MS.gene44074:CDS
CGGTTGAACCACCGAATGAC+CGG 0.529306 1.3:-58122695 None:intergenic
GCTGAAACAGACAATTAAAC+CGG 0.531764 1.3:-58123060 None:intergenic
CAACCGGGTGAATCGGTTCA+CGG 0.534267 1.3:+58122466 MS.gene44074:CDS
ACCGGGGTTTATTATCAGAC+CGG 0.534594 1.3:+58122905 MS.gene44074:CDS
CTCCGTGAACTAGTTTCTCT+CGG 0.538814 1.3:-58122823 None:intergenic
AGCGCGTGGTCTTGACGCAT+CGG 0.542829 1.3:+58122228 MS.gene44074:CDS
GTCAACACTTCTGGTTCAGT+TGG 0.543615 1.3:-58122592 None:intergenic
GGTGGTGAAGGAAGTAGTAG+AGG 0.547027 1.3:+58122862 MS.gene44074:CDS
TGCTCCGGCGAAGGGGACGC+CGG 0.550536 1.3:-58122014 None:intergenic
ACGATTATTATAGCCATGGA+AGG 0.551241 1.3:-58122082 None:intergenic
TACATCTGCTTCAGCAGCTA+CGG 0.555290 1.3:+58123011 MS.gene44074:CDS
AACATGGCAGGAGGTTTAGC+TGG 0.555970 1.3:+58122190 MS.gene44074:CDS
CCAGAGCTACTAGCCACCCT+TGG 0.560296 1.3:-58122982 None:intergenic
GTGGTGAAGGAAGTAGTAGA+GGG 0.560832 1.3:+58122863 MS.gene44074:CDS
AGGGAAGTCTGTAAGGCGGT+TGG 0.563226 1.3:+58122882 MS.gene44074:CDS
GGTCATTCGGTGGTTCAACC+GGG 0.563296 1.3:+58122697 MS.gene44074:CDS
CGATTATTATAGCCATGGAA+GGG 0.570321 1.3:-58122081 None:intergenic
TAAAATCGGAAAAGGCGCGT+TGG 0.576420 1.3:+58122297 MS.gene44074:CDS
AATTACGATTATTATAGCCA+TGG 0.576610 1.3:-58122086 None:intergenic
CAACCGTGTAAGCCCTTCCA+TGG 0.576724 1.3:+58122069 MS.gene44074:CDS
AACCGTTCAGTGTTCTCACC+CGG 0.577046 1.3:-58122715 None:intergenic
CAAGAGGTTCACAGTCTGGT+AGG 0.578814 1.3:+58122644 MS.gene44074:CDS
TGCCGAGAGAAACTAGTTCA+CGG 0.579406 1.3:+58122821 MS.gene44074:CDS
CGTTCACGACGCGCAGCGCG+TGG 0.581144 1.3:+58122214 MS.gene44074:CDS
TGGATTGTGCTCCGGCGAAG+GGG 0.581939 1.3:-58122021 None:intergenic
TGAACCGATTCACCCGGTTG+AGG 0.582525 1.3:-58122463 None:intergenic
ATTACATAGAGCTAGAAGCT+TGG 0.585444 1.3:+58122792 MS.gene44074:CDS
TTGTAAGAGCGTCGTCGATG+AGG 0.587789 1.3:+58122956 MS.gene44074:CDS
TGTGGTTCGGTATTAATCGA+CGG 0.592922 1.3:-58122493 None:intergenic
TAGCCATGGAAGGGCTTACA+CGG 0.600576 1.3:-58122072 None:intergenic
GGGGTTTATTATCAGACCGG+TGG 0.601732 1.3:+58122908 MS.gene44074:CDS
CAGACTGTGAACCTCTTGTA+CGG 0.601926 1.3:-58122639 None:intergenic
AACAGCATACGCAACATGGC+AGG 0.603528 1.3:+58122178 MS.gene44074:CDS
TTCCAACAGCATACGCAACA+TGG 0.603661 1.3:+58122174 MS.gene44074:CDS
AGCTCTGCAAACCGGACAAG+TGG 0.605322 1.3:-58122431 None:intergenic
GAGAGAAACTAGTTCACGGA+GGG 0.607219 1.3:+58122825 MS.gene44074:CDS
ACAAATACTACTACAGAACC+CGG 0.610210 1.3:+58122768 MS.gene44074:CDS
TCAATCTACATCCGTCGATG+CGG 0.611966 1.3:+58122142 MS.gene44074:CDS
GTCGATGAGGTCACCAAGGG+TGG 0.612726 1.3:+58122969 MS.gene44074:CDS
TGAGGCTACCGGTTGAAGTG+AGG 0.617089 1.3:+58122743 MS.gene44074:CDS
AGCCATTCATCAATACACTC+AGG 0.617765 1.3:-58122397 None:intergenic
GGGTTTATTATCAGACCGGT+GGG 0.618718 1.3:+58122909 MS.gene44074:CDS
CTGAACCGGAACCGTACAAG+AGG 0.626899 1.3:+58122628 MS.gene44074:CDS
TCTGTAAGGCGGTTGGACCG+GGG 0.627057 1.3:+58122889 MS.gene44074:CDS
GTGGCTAGTAGCTCTGGTGA+AGG 0.628823 1.3:+58122988 MS.gene44074:CDS
GACGACGCTCTTACAAGGAA+AGG 0.631736 1.3:-58122949 None:intergenic
CAATTAAACCGGTGGCCGCG+GGG 0.633322 1.3:-58123049 None:intergenic
GAGTGTATTGATGAATGGCT+CGG 0.639572 1.3:+58122400 MS.gene44074:CDS
GTCGTCGATGAGGTCACCAA+GGG 0.640752 1.3:+58122966 MS.gene44074:CDS
ATCTGCTTCAGCAGCTACGG+CGG 0.641205 1.3:+58123014 MS.gene44074:CDS
AAGGTGAATCGCCGCATCGA+CGG 0.646247 1.3:-58122153 None:intergenic
GACGCTCTTACAAGGAAAGG+TGG 0.654435 1.3:-58122946 None:intergenic
ATGTTGCGTATGCTGTTGGA+AGG 0.655101 1.3:-58122172 None:intergenic
CGTCGTCGATGAGGTCACCA+AGG 0.655380 1.3:+58122965 MS.gene44074:CDS
GCCATTCATCAATACACTCA+GGG 0.657590 1.3:-58122396 None:intergenic
ATACCGTGAACCGATTCACC+CGG 0.658513 1.3:-58122469 None:intergenic
TCACTCGACCGGTCATTCGG+TGG 0.659670 1.3:+58122687 MS.gene44074:CDS
AGCATACGCAACATGGCAGG+AGG 0.660418 1.3:+58122181 MS.gene44074:CDS
CGGAGGGGTTATCGAACCGG+TGG 0.660988 1.3:+58122841 MS.gene44074:CDS
AACCGGGTGAGAACACTGAA+CGG 0.665353 1.3:+58122713 MS.gene44074:CDS
GAAACAGACAATTAAACCGG+TGG 0.672321 1.3:-58123057 None:intergenic
CATGAACATCAAAACGCGGA+CGG 0.680031 1.3:+58122553 MS.gene44074:CDS
AGAGAAACTAGTTCACGGAG+GGG 0.692307 1.3:+58122826 MS.gene44074:CDS
ACCGGTCTGATAATAAACCC+CGG 0.693889 1.3:-58122906 None:intergenic
GTAGAGGGAAGTCTGTAAGG+CGG 0.711054 1.3:+58122878 MS.gene44074:CDS
CGAGAGAAACTAGTTCACGG+AGG 0.730676 1.3:+58122824 MS.gene44074:CDS
CGGCGGTTGTTGACTCCCCG+CGG 0.731222 1.3:+58123034 MS.gene44074:CDS
GGTTCATGAACATCAAAACG+CGG 0.772463 1.3:+58122549 MS.gene44074:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGATTCATAAAATCGGAAA+AGG + chr1.3:58122289-58122308 MS.gene44074:CDS 25.0%
! AATTACGATTATTATAGCCA+TGG - chr1.3:58122089-58122108 None:intergenic 25.0%
AGAACAAGAAAAAACACACA+AGG - chr1.3:58121982-58122001 None:intergenic 30.0%
GCTGTGAAGATTCATAAAAT+CGG + chr1.3:58122283-58122302 MS.gene44074:CDS 30.0%
TGAAAAACATGATCACACTT+TGG - chr1.3:58122376-58122395 None:intergenic 30.0%
! TTTTGAGCTTCAATATCTTG+TGG - chr1.3:58122514-58122533 None:intergenic 30.0%
ACAAATACTACTACAGAACC+CGG + chr1.3:58122768-58122787 MS.gene44074:CDS 35.0%
ACAGCTGAGTATTCAAAGAT+CGG - chr1.3:58122268-58122287 None:intergenic 35.0%
ACGATTATTATAGCCATGGA+AGG - chr1.3:58122085-58122104 None:intergenic 35.0%
AGCTTCAATATCTTGTGGTT+CGG - chr1.3:58122509-58122528 None:intergenic 35.0%
ATTACATAGAGCTAGAAGCT+TGG + chr1.3:58122792-58122811 MS.gene44074:CDS 35.0%
ATTTGTTTCCTCACTTCAAC+CGG - chr1.3:58122754-58122773 None:intergenic 35.0%
CGATTATTATAGCCATGGAA+GGG - chr1.3:58122084-58122103 None:intergenic 35.0%
TCAAAACGAAGCTGTTGAAT+CGG + chr1.3:58122528-58122547 MS.gene44074:CDS 35.0%
! TTGTTCTTCCTCTTTTTCTC+CGG + chr1.3:58121995-58122014 MS.gene44074:CDS 35.0%
!! CTTCTAGCTCTATGTAATTC+CGG - chr1.3:58122790-58122809 None:intergenic 35.0%
!! TTCTAGCTCTATGTAATTCC+GGG - chr1.3:58122789-58122808 None:intergenic 35.0%
AGCCATTCATCAATACACTC+AGG - chr1.3:58122400-58122419 None:intergenic 40.0%
CAGCTGAGTATTCAAAGATC+GGG - chr1.3:58122267-58122286 None:intergenic 40.0%
GCCATTCATCAATACACTCA+GGG - chr1.3:58122399-58122418 None:intergenic 40.0%
GGTTCATGAACATCAAAACG+CGG + chr1.3:58122549-58122568 MS.gene44074:CDS 40.0%
! ACCCTGAGTGTATTGATGAA+TGG + chr1.3:58122395-58122414 MS.gene44074:CDS 40.0%
! AGAGTCGTTTGTGTTTTCGT+TGG - chr1.3:58122044-58122063 None:intergenic 40.0%
! AGCTAATTTGGTTCCTCAAC+CGG + chr1.3:58122450-58122469 MS.gene44074:CDS 40.0%
! ATCGCTGCTCTTTTTCTCAT+GGG + chr1.3:58122112-58122131 MS.gene44074:CDS 40.0%
! GAGTGTATTGATGAATGGCT+CGG + chr1.3:58122400-58122419 MS.gene44074:CDS 40.0%
!! ACCAAATTAGCTCTGCAAAC+CGG - chr1.3:58122442-58122461 None:intergenic 40.0%
!! TGTGGTTCGGTATTAATCGA+CGG - chr1.3:58122496-58122515 None:intergenic 40.0%
ACACTGAACGGTTCACTTTG+AGG + chr1.3:58122725-58122744 MS.gene44074:CDS 45.0%
ACCGGGGTTTATTATCAGAC+CGG + chr1.3:58122905-58122924 MS.gene44074:CDS 45.0%
ACCGGTCTGATAATAAACCC+CGG - chr1.3:58122909-58122928 None:intergenic 45.0%
AGAGAAACTAGTTCACGGAG+GGG + chr1.3:58122826-58122845 MS.gene44074:CDS 45.0%
ATGTTGCGTATGCTGTTGGA+AGG - chr1.3:58122175-58122194 None:intergenic 45.0%
CAGACTGTGAACCTCTTGTA+CGG - chr1.3:58122642-58122661 None:intergenic 45.0%
CATGAACATCAAAACGCGGA+CGG + chr1.3:58122553-58122572 MS.gene44074:CDS 45.0%
GAGAGAAACTAGTTCACGGA+GGG + chr1.3:58122825-58122844 MS.gene44074:CDS 45.0%
GGGTTTATTATCAGACCGGT+GGG + chr1.3:58122909-58122928 MS.gene44074:CDS 45.0%
GTAGTAGAGGGAAGTCTGTA+AGG + chr1.3:58122875-58122894 MS.gene44074:CDS 45.0%
GTGGTGAAGGAAGTAGTAGA+GGG + chr1.3:58122863-58122882 MS.gene44074:CDS 45.0%
TACATCTGCTTCAGCAGCTA+CGG + chr1.3:58123011-58123030 MS.gene44074:CDS 45.0%
TCAATCTACATCCGTCGATG+CGG + chr1.3:58122142-58122161 MS.gene44074:CDS 45.0%
TGCCGAGAGAAACTAGTTCA+CGG + chr1.3:58122821-58122840 MS.gene44074:CDS 45.0%
TGGCTTACAGTCAACACTTC+TGG - chr1.3:58122604-58122623 None:intergenic 45.0%
TTCCAACAGCATACGCAACA+TGG + chr1.3:58122174-58122193 MS.gene44074:CDS 45.0%
! CATCGCTGCTCTTTTTCTCA+TGG + chr1.3:58122111-58122130 MS.gene44074:CDS 45.0%
! CTCCGTGAACTAGTTTCTCT+CGG - chr1.3:58122826-58122845 None:intergenic 45.0%
! GCTAATTTGGTTCCTCAACC+GGG + chr1.3:58122451-58122470 MS.gene44074:CDS 45.0%
! GTTTTCGTTGGATTGTGCTC+CGG - chr1.3:58122032-58122051 None:intergenic 45.0%
! TAAAATCGGAAAAGGCGCGT+TGG + chr1.3:58122297-58122316 MS.gene44074:CDS 45.0%
! TCCGGTTTGCAGAGCTAATT+TGG + chr1.3:58122438-58122457 MS.gene44074:CDS 45.0%
!! GTCAACACTTCTGGTTCAGT+TGG - chr1.3:58122595-58122614 None:intergenic 45.0%
!! GTGGTTCGGTATTAATCGAC+GGG - chr1.3:58122495-58122514 None:intergenic 45.0%
AACAGCATACGCAACATGGC+AGG + chr1.3:58122178-58122197 MS.gene44074:CDS 50.0%
AACATGGCAGGAGGTTTAGC+TGG + chr1.3:58122190-58122209 MS.gene44074:CDS 50.0%
AACCGGGTGAGAACACTGAA+CGG + chr1.3:58122713-58122732 MS.gene44074:CDS 50.0%
AACCGTTCAGTGTTCTCACC+CGG - chr1.3:58122718-58122737 None:intergenic 50.0%
ACTACTTCCTTCACCACCAC+CGG - chr1.3:58122860-58122879 None:intergenic 50.0%
CAAGAGGTTCACAGTCTGGT+AGG + chr1.3:58122644-58122663 MS.gene44074:CDS 50.0%
CGAGAGAAACTAGTTCACGG+AGG + chr1.3:58122824-58122843 MS.gene44074:CDS 50.0%
CGGTTCTCATACCACTTGTC+CGG + chr1.3:58122420-58122439 MS.gene44074:CDS 50.0%
CGTACAAGAGGTTCACAGTC+TGG + chr1.3:58122640-58122659 MS.gene44074:CDS 50.0%
GACGACGCTCTTACAAGGAA+AGG - chr1.3:58122952-58122971 None:intergenic 50.0%
GACGCTCTTACAAGGAAAGG+TGG - chr1.3:58122949-58122968 None:intergenic 50.0%
GGGGTTTATTATCAGACCGG+TGG + chr1.3:58122908-58122927 MS.gene44074:CDS 50.0%
GGTGGTGAAGGAAGTAGTAG+AGG + chr1.3:58122862-58122881 MS.gene44074:CDS 50.0%
GTAGAGGGAAGTCTGTAAGG+CGG + chr1.3:58122878-58122897 MS.gene44074:CDS 50.0%
GTGAACCTCTTGTACGGTTC+CGG - chr1.3:58122636-58122655 None:intergenic 50.0%
TAGCCATGGAAGGGCTTACA+CGG - chr1.3:58122075-58122094 None:intergenic 50.0%
TCATCGACGACGCTCTTACA+AGG - chr1.3:58122957-58122976 None:intergenic 50.0%
TGCCATGTTGCGTATGCTGT+TGG - chr1.3:58122179-58122198 None:intergenic 50.0%
! ATACCGTGAACCGATTCACC+CGG - chr1.3:58122472-58122491 None:intergenic 50.0%
!! ACGGTTCACTTTGAGGCTAC+CGG + chr1.3:58122732-58122751 MS.gene44074:CDS 50.0%
!! AGACCGGTGGGTTTTTACGA+TGG + chr1.3:58122921-58122940 MS.gene44074:CDS 50.0%
!! TTGTAAGAGCGTCGTCGATG+AGG + chr1.3:58122956-58122975 MS.gene44074:CDS 50.0%
!! TTTTCGAGGTCTCACTCGAC+CGG + chr1.3:58122676-58122695 MS.gene44074:CDS 50.0%
!!! GTAGGCTTCGTTGGTTTTCG+AGG + chr1.3:58122662-58122681 MS.gene44074:CDS 50.0%
AAGGTGAATCGCCGCATCGA+CGG - chr1.3:58122156-58122175 None:intergenic 55.0%
AGCATACGCAACATGGCAGG+AGG + chr1.3:58122181-58122200 MS.gene44074:CDS 55.0%
AGCTCTGCAAACCGGACAAG+TGG - chr1.3:58122434-58122453 None:intergenic 55.0%
AGGGAAGTCTGTAAGGCGGT+TGG + chr1.3:58122882-58122901 MS.gene44074:CDS 55.0%
AGTCTGTAAGGCGGTTGGAC+CGG + chr1.3:58122887-58122906 MS.gene44074:CDS 55.0%
ATCTGCTTCAGCAGCTACGG+CGG + chr1.3:58123014-58123033 MS.gene44074:CDS 55.0%
CAACCGTGTAAGCCCTTCCA+TGG + chr1.3:58122069-58122088 MS.gene44074:CDS 55.0%
CACAGTCTGGTAGGCTTCGT+TGG + chr1.3:58122653-58122672 MS.gene44074:CDS 55.0%
CGGTTGAACCACCGAATGAC+CGG - chr1.3:58122698-58122717 None:intergenic 55.0%
CTGAACCGGAACCGTACAAG+AGG + chr1.3:58122628-58122647 MS.gene44074:CDS 55.0%
CTGTAAGCCAGACGCTGAAC+CGG + chr1.3:58122614-58122633 MS.gene44074:CDS 55.0%
GCGCCATCGTAAAAACCCAC+CGG - chr1.3:58122927-58122946 None:intergenic 55.0%
GGTTCCTCAACCGGGTGAAT+CGG + chr1.3:58122459-58122478 MS.gene44074:CDS 55.0%
GTCGTCGATGAGGTCACCAA+GGG + chr1.3:58122966-58122985 MS.gene44074:CDS 55.0%
GTCTCACTCGACCGGTCATT+CGG + chr1.3:58122684-58122703 MS.gene44074:CDS 55.0%
TCACGGAGGGGTTATCGAAC+CGG + chr1.3:58122838-58122857 MS.gene44074:CDS 55.0%
TTGGATTGTGCTCCGGCGAA+GGG - chr1.3:58122025-58122044 None:intergenic 55.0%
! CAACCGGGTGAATCGGTTCA+CGG + chr1.3:58122466-58122485 MS.gene44074:CDS 55.0%
! CGGTCATTCGGTGGTTCAAC+CGG + chr1.3:58122696-58122715 MS.gene44074:CDS 55.0%
! GGTCATTCGGTGGTTCAACC+GGG + chr1.3:58122697-58122716 MS.gene44074:CDS 55.0%
! TATCGAACCGGTGGTGGTGA+AGG + chr1.3:58122850-58122869 MS.gene44074:CDS 55.0%
! TGAACCGATTCACCCGGTTG+AGG - chr1.3:58122466-58122485 None:intergenic 55.0%
! TGAGGCTACCGGTTGAAGTG+AGG + chr1.3:58122743-58122762 MS.gene44074:CDS 55.0%
!! GTGGCTAGTAGCTCTGGTGA+AGG + chr1.3:58122988-58123007 MS.gene44074:CDS 55.0%
AGGGGACGCCGGAGAAAAAG+AGG - chr1.3:58122006-58122025 None:intergenic 60.0%
AGGGGTTATCGAACCGGTGG+TGG + chr1.3:58122844-58122863 MS.gene44074:CDS 60.0%
CCAAGGGTGGCTAGTAGCTC+TGG + chr1.3:58122982-58123001 MS.gene44074:CDS 60.0%
CCAGAGCTACTAGCCACCCT+TGG - chr1.3:58122985-58123004 None:intergenic 60.0%
CGTCGTCGATGAGGTCACCA+AGG + chr1.3:58122965-58122984 MS.gene44074:CDS 60.0%
GTCGATGAGGTCACCAAGGG+TGG + chr1.3:58122969-58122988 MS.gene44074:CDS 60.0%
GTCTGTAAGGCGGTTGGACC+GGG + chr1.3:58122888-58122907 MS.gene44074:CDS 60.0%
GTTGGATTGTGCTCCGGCGA+AGG - chr1.3:58122026-58122045 None:intergenic 60.0%
TACGGTTCCGGTTCAGCGTC+TGG - chr1.3:58122624-58122643 None:intergenic 60.0%
TCACTCGACCGGTCATTCGG+TGG + chr1.3:58122687-58122706 MS.gene44074:CDS 60.0%
TCTGTAAGGCGGTTGGACCG+GGG + chr1.3:58122889-58122908 MS.gene44074:CDS 60.0%
TGGATTGTGCTCCGGCGAAG+GGG - chr1.3:58122024-58122043 None:intergenic 60.0%
! AGCGCGTGGTCTTGACGCAT+CGG + chr1.3:58122228-58122247 MS.gene44074:CDS 60.0%
CGGAGGGGTTATCGAACCGG+TGG + chr1.3:58122841-58122860 MS.gene44074:CDS 65.0%
TGCTTCAGCAGCTACGGCGG+CGG + chr1.3:58123017-58123036 MS.gene44074:CDS 65.0%
TTCTCCGGCGTCCCCTTCGC+CGG + chr1.3:58122010-58122029 MS.gene44074:CDS 70.0%
!! CGGCGGTTGTTGACTCCCCG+CGG + chr1.3:58123034-58123053 MS.gene44074:CDS 70.0%
!! TGTTGACTCCCCGCGGCCAC+CGG + chr1.3:58123041-58123060 MS.gene44074:CDS 70.0%
CGTTCACGACGCGCAGCGCG+TGG + chr1.3:58122214-58122233 MS.gene44074:CDS 75.0%
TGCTCCGGCGAAGGGGACGC+CGG - chr1.3:58122017-58122036 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 58121947 58123068 58121947 ID=MS.gene44074
chr1.3 mRNA 58121947 58123068 58121947 ID=MS.gene44074.t1;Parent=MS.gene44074
chr1.3 exon 58121947 58123068 58121947 ID=MS.gene44074.t1.exon1;Parent=MS.gene44074.t1
chr1.3 CDS 58121947 58123068 58121947 ID=cds.MS.gene44074.t1;Parent=MS.gene44074.t1
Gene Sequence

>MS.gene44074

ATGGATAACTCATATCAAAATGACAAAACTATCCTTGTGTGTTTTTTCTTGTTCTTCCTCTTTTTCTCCGGCGTCCCCTTCGCCGGAGCACAATCCAACGAAAACACAAACGACTCTTATTACAACCGTGTAAGCCCTTCCATGGCTATAATAATCGTAATTCTCATCGCTGCTCTTTTTCTCATGGGTTTCTTCTCAATCTACATCCGTCGATGCGGCGATTCACCTTCCAACAGCATACGCAACATGGCAGGAGGTTTAGCTGGACGTTCACGACGCGCAGCGCGTGGTCTTGACGCATCGGTGATCGCGACGTTCCCGATCTTTGAATACTCAGCTGTGAAGATTCATAAAATCGGAAAAGGCGCGTTGGAGTGTGCTGTTTGTTTGAACGAGTTTGAAGAGAGTGAAACGCTGCGTTTGATTCCAAAGTGTGATCATGTTTTTCACCCTGAGTGTATTGATGAATGGCTCGGTTCTCATACCACTTGTCCGGTTTGCAGAGCTAATTTGGTTCCTCAACCGGGTGAATCGGTTCACGGTATCCCGTCGATTAATACCGAACCACAAGATATTGAAGCTCAAAACGAAGCTGTTGAATCGGTTCATGAACATCAAAACGCGGACGGTTCTGTAAAAGTCGAGCCAACTGAACCAGAAGTGTTGACTGTAAGCCAGACGCTGAACCGGAACCGTACAAGAGGTTCACAGTCTGGTAGGCTTCGTTGGTTTTCGAGGTCTCACTCGACCGGTCATTCGGTGGTTCAACCGGGTGAGAACACTGAACGGTTCACTTTGAGGCTACCGGTTGAAGTGAGGAAACAAATACTACTACAGAACCCGGAATTACATAGAGCTAGAAGCTTGGTTGTGTTGCCGAGAGAAACTAGTTCACGGAGGGGTTATCGAACCGGTGGTGGTGAAGGAAGTAGTAGAGGGAAGTCTGTAAGGCGGTTGGACCGGGGTTTATTATCAGACCGGTGGGTTTTTACGATGGCGCCACCTTTCCTTGTAAGAGCGTCGTCGATGAGGTCACCAAGGGTGGCTAGTAGCTCTGGTGAAGGTACATCTGCTTCAGCAGCTACGGCGGCGGTTGTTGACTCCCCGCGGCCACCGGTTTAA
Protein sequence

>MS.gene44074.t1

MDNSYQNDKTILVCFFLFFLFFSGVPFAGAQSNENTNDSYYNRVSPSMAIIIVILIAALFLMGFFSIYIRRCGDSPSNSIRNMAGGLAGRSRRAARGLDASVIATFPIFEYSAVKIHKIGKGALECAVCLNEFEESETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHGIPSINTEPQDIEAQNEAVESVHEHQNADGSVKVEPTEPEVLTVSQTLNRNRTRGSQSGRLRWFSRSHSTGHSVVQPGENTERFTLRLPVEVRKQILLQNPELHRARSLVVLPRETSSRRGYRTGGGEGSSRGKSVRRLDRGLLSDRWVFTMAPPFLVRASSMRSPRVASSSGEGTSASAATAAVVDSPRPPV