Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35332.t1 | KEH38910.1 | 96.1 | 436 | 17 | 0 | 1 | 436 | 1 | 436 | 4.00E-252 | 880.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35332.t1 | P42785 | 37.3 | 445 | 243 | 13 | 13 | 436 | 7 | 436 | 4.0e-75 | 283.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35332.t1 | A0A072VLA7 | 96.1 | 436 | 17 | 0 | 1 | 436 | 1 | 436 | 2.9e-252 | 880.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049757 | MS.gene35332 | 0.807918 | 4.00E-50 | -1.69E-46 |
| MS.gene050400 | MS.gene35332 | 0.828857 | 7.12E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene35332 | 0.830153 | 3.45E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene35332 | 0.821449 | 4.01E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene35332 | 0.803654 | 3.14E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene35332 | 0.852749 | 3.76E-61 | -1.69E-46 |
| MS.gene051838 | MS.gene35332 | 0.817967 | 2.51E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene35332 | 0.842564 | 2.39E-58 | -1.69E-46 |
| MS.gene052011 | MS.gene35332 | -0.804138 | 2.49E-49 | -1.69E-46 |
| MS.gene052128 | MS.gene35332 | -0.809483 | 1.85E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene35332 | 0.813162 | 2.94E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene35332 | 0.800744 | 1.25E-48 | -1.69E-46 |
| MS.gene052346 | MS.gene35332 | 0.846 | 2.86E-59 | -1.69E-46 |
| MS.gene052414 | MS.gene35332 | 0.831954 | 1.25E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene35332 | 0.815986 | 6.98E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene35332 | 0.818944 | 1.50E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene35332 | 0.817121 | 3.89E-52 | -1.69E-46 |
| MS.gene052999 | MS.gene35332 | 0.814878 | 1.23E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene35332 | 0.85453 | 1.16E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene35332 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene053873 | MS.gene35332 | 0.802623 | 5.14E-49 | -1.69E-46 |
| MS.gene054107 | MS.gene35332 | 0.835778 | 1.38E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene35332 | 0.843196 | 1.63E-58 | -1.69E-46 |
| MS.gene054884 | MS.gene35332 | -0.808574 | 2.90E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene35332 | 0.806569 | 7.72E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene35332 | 0.827248 | 1.74E-54 | -1.69E-46 |
| MS.gene055539 | MS.gene35332 | 0.837774 | 4.26E-57 | -1.69E-46 |
| MS.gene055741 | MS.gene35332 | 0.865073 | 7.69E-65 | -1.69E-46 |
| MS.gene055744 | MS.gene35332 | 0.866791 | 2.20E-65 | -1.69E-46 |
| MS.gene055909 | MS.gene35332 | 0.841974 | 3.43E-58 | -1.69E-46 |
| MS.gene055911 | MS.gene35332 | 0.844701 | 6.42E-59 | -1.69E-46 |
| MS.gene056511 | MS.gene35332 | 0.821085 | 4.87E-53 | -1.69E-46 |
| MS.gene056514 | MS.gene35332 | 0.847631 | 1.02E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene35332 | 0.805337 | 1.40E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene35332 | 0.851288 | 9.79E-61 | -1.69E-46 |
| MS.gene057019 | MS.gene35332 | 0.872251 | 3.67E-67 | -1.69E-46 |
| MS.gene057124 | MS.gene35332 | 0.808126 | 3.61E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene35332 | 0.806755 | 7.05E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene35332 | 0.815617 | 8.44E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene35332 | 0.815578 | 8.60E-52 | -1.69E-46 |
| MS.gene057825 | MS.gene35332 | 0.823498 | 1.34E-53 | -1.69E-46 |
| MS.gene057888 | MS.gene35332 | 0.814291 | 1.66E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene35332 | 0.843086 | 1.74E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene35332 | 0.835667 | 1.47E-56 | -1.69E-46 |
| MS.gene058700 | MS.gene35332 | 0.850949 | 1.22E-60 | -1.69E-46 |
| MS.gene058948 | MS.gene35332 | 0.807661 | 4.53E-50 | -1.69E-46 |
| MS.gene059011 | MS.gene35332 | 0.819708 | 1.01E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene35332 | 0.816771 | 4.66E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene35332 | 0.814377 | 1.59E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene35332 | 0.856896 | 2.36E-62 | -1.69E-46 |
| MS.gene060403 | MS.gene35332 | 0.805504 | 1.29E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene35332 | 0.825048 | 5.80E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene35332 | 0.805476 | 1.31E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene35332 | 0.843949 | 1.02E-58 | -1.69E-46 |
| MS.gene061214 | MS.gene35332 | 0.837098 | 6.35E-57 | -1.69E-46 |
| MS.gene061215 | MS.gene35332 | 0.837354 | 5.46E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene60169 | MS.gene35332 | PPI |
| MS.gene35332 | MS.gene45615 | PPI |
| MS.gene35332 | MS.gene011684 | PPI |
| MS.gene44433 | MS.gene35332 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35332.t1 | MTR_2g084535 | 96.101 | 436 | 17 | 0 | 1 | 436 | 1 | 436 | 0.0 | 877 |
| MS.gene35332.t1 | MTR_2g075300 | 60.140 | 429 | 154 | 8 | 10 | 436 | 8 | 421 | 0.0 | 514 |
| MS.gene35332.t1 | MTR_7g105400 | 51.646 | 395 | 172 | 6 | 56 | 436 | 53 | 442 | 4.13e-137 | 403 |
| MS.gene35332.t1 | MTR_7g105390 | 49.620 | 395 | 185 | 5 | 56 | 436 | 48 | 442 | 2.52e-128 | 380 |
| MS.gene35332.t1 | MTR_7g105390 | 47.258 | 383 | 160 | 5 | 56 | 436 | 66 | 408 | 1.46e-111 | 336 |
| MS.gene35332.t1 | MTR_4g097590 | 43.885 | 417 | 189 | 7 | 56 | 435 | 56 | 464 | 1.13e-110 | 336 |
| MS.gene35332.t1 | MTR_5g021530 | 31.347 | 453 | 228 | 26 | 11 | 435 | 7 | 404 | 3.86e-33 | 130 |
| MS.gene35332.t1 | MTR_8g076210 | 30.296 | 406 | 221 | 20 | 55 | 435 | 13 | 381 | 2.84e-31 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35332.t1 | AT5G22860 | 51.376 | 436 | 196 | 7 | 13 | 436 | 8 | 439 | 8.54e-152 | 438 |
| MS.gene35332.t1 | AT5G22860 | 51.376 | 436 | 196 | 7 | 13 | 436 | 8 | 439 | 8.54e-152 | 438 |
| MS.gene35332.t1 | AT5G22860 | 51.376 | 436 | 196 | 7 | 13 | 436 | 8 | 439 | 1.21e-151 | 438 |
| MS.gene35332.t1 | AT5G22860 | 51.376 | 436 | 196 | 7 | 13 | 436 | 8 | 439 | 4.52e-151 | 438 |
| MS.gene35332.t1 | AT5G22860 | 50.123 | 407 | 187 | 7 | 13 | 407 | 8 | 410 | 9.99e-135 | 397 |
| MS.gene35332.t1 | AT5G22860 | 50.123 | 407 | 187 | 7 | 13 | 407 | 8 | 410 | 9.99e-135 | 397 |
| MS.gene35332.t1 | AT5G22860 | 50.123 | 407 | 187 | 7 | 13 | 407 | 8 | 410 | 9.99e-135 | 397 |
| MS.gene35332.t1 | AT2G24280 | 44.144 | 444 | 216 | 6 | 11 | 436 | 5 | 434 | 1.90e-126 | 373 |
| MS.gene35332.t1 | AT2G24280 | 44.144 | 444 | 216 | 6 | 11 | 436 | 5 | 434 | 5.59e-126 | 374 |
| MS.gene35332.t1 | AT5G65760 | 46.835 | 395 | 189 | 7 | 56 | 435 | 59 | 447 | 2.48e-119 | 358 |
| MS.gene35332.t1 | AT5G22860 | 49.861 | 359 | 165 | 6 | 13 | 360 | 8 | 362 | 4.81e-115 | 342 |
| MS.gene35332.t1 | AT3G28680 | 42.529 | 174 | 95 | 4 | 190 | 359 | 18 | 190 | 1.06e-42 | 149 |
| MS.gene35332.t1 | AT4G36195 | 27.805 | 410 | 225 | 16 | 56 | 435 | 46 | 414 | 7.15e-25 | 107 |
| MS.gene35332.t1 | AT4G36195 | 27.805 | 410 | 225 | 16 | 56 | 435 | 46 | 414 | 1.17e-24 | 106 |
| MS.gene35332.t1 | AT4G36195 | 27.805 | 410 | 225 | 16 | 56 | 435 | 46 | 414 | 1.17e-24 | 106 |
| MS.gene35332.t1 | AT4G36190 | 28.710 | 411 | 220 | 18 | 56 | 435 | 46 | 414 | 2.15e-24 | 105 |
| MS.gene35332.t1 | AT2G18080 | 26.747 | 415 | 220 | 19 | 58 | 435 | 48 | 415 | 1.28e-21 | 97.4 |
Find 89 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGTTGCAATGTCGTTTA+AGG | 0.140246 | 2.1:+16992376 | None:intergenic |
| ATATACTAAAAGAGCTTTAA+AGG | 0.168188 | 2.1:+16992127 | None:intergenic |
| ATTTGATCAATTTCAAATAT+TGG | 0.182290 | 2.1:-16992253 | MS.gene35332:CDS |
| CATTGGATTACTACTTATTA+TGG | 0.189882 | 2.1:-16988864 | MS.gene35332:CDS |
| TTTGATCAATTTCAAATATT+GGG | 0.216568 | 2.1:-16992252 | MS.gene35332:CDS |
| TAAAATGTTTCAACATCTTT+TGG | 0.224312 | 2.1:+16992341 | None:intergenic |
| TCACGACTACTGGGGAGTTT+TGG | 0.230509 | 2.1:+16991829 | None:intergenic |
| TTATATCAGCATCGGTATTA+TGG | 0.238679 | 2.1:-16991981 | MS.gene35332:intron |
| GGAATTGATAAAGCTTCTTT+TGG | 0.245805 | 2.1:-16990441 | MS.gene35332:CDS |
| TCACTTGGCCATTGGTGCTT+TGG | 0.266851 | 2.1:-16991453 | MS.gene35332:CDS |
| CAACTCAAAAGAATGGTTTA+AGG | 0.287048 | 2.1:+16990545 | None:intergenic |
| AAACGAGTTCTTCAAAAGTT+TGG | 0.309801 | 2.1:-16988274 | MS.gene35332:CDS |
| CAGTGCTTGCTGCATGGTTT+AGG | 0.320590 | 2.1:-16991487 | MS.gene35332:CDS |
| CCACTACATATCACGGTAAC+TGG | 0.327485 | 2.1:+16990462 | None:intergenic |
| TGCTCCAATATTTGTCTACT+TGG | 0.333285 | 2.1:-16992213 | MS.gene35332:CDS |
| GAACCATCTATTGCTTGTTC+TGG | 0.339066 | 2.1:+16992188 | None:intergenic |
| GGACCCAAGTAGACAAATAT+TGG | 0.343910 | 2.1:+16992209 | None:intergenic |
| GCTTACCCGGCACTACTATA+AGG | 0.362908 | 2.1:+16988217 | None:intergenic |
| CTAAGAATTGAAAGACCATT+TGG | 0.372278 | 2.1:+16990854 | None:intergenic |
| ATCCTTGATAAGATATATTC+AGG | 0.388285 | 2.1:-16990411 | MS.gene35332:CDS |
| GAAAGATGCAAGAAAGAATA+TGG | 0.398219 | 2.1:-16988903 | MS.gene35332:CDS |
| GTGTCTCACCTCGCCCTCAT+TGG | 0.398503 | 2.1:-16988881 | MS.gene35332:CDS |
| ATGAAACAATATTGAACTCT+TGG | 0.400378 | 2.1:-16990904 | MS.gene35332:CDS |
| ACAAATCTCTTTAAGTCAAA+AGG | 0.401588 | 2.1:+16988927 | None:intergenic |
| CTTAAACGACATTGCAACCT+TGG | 0.412069 | 2.1:-16992375 | MS.gene35332:CDS |
| TATGGAAAATCAATACCGTT+TGG | 0.413960 | 2.1:-16991963 | MS.gene35332:CDS |
| TTAAATGTATTATAGCTTTG+TGG | 0.421207 | 2.1:+16992284 | None:intergenic |
| GATGGTTCTCCTAAGGGTAT+AGG | 0.432542 | 2.1:-16992173 | MS.gene35332:CDS |
| GATCCTCCAATCACGACTAC+TGG | 0.442947 | 2.1:+16991819 | None:intergenic |
| AACTCAAAAGAATGGTTTAA+GGG | 0.443392 | 2.1:+16990546 | None:intergenic |
| TTCAGGTGTTGTGGCTTACA+AGG | 0.449221 | 2.1:-16990394 | MS.gene35332:CDS |
| ACAACATCGAAATAAGCATT+TGG | 0.451510 | 2.1:+16991389 | None:intergenic |
| ATCACGGTAACTGGATAGTC+TGG | 0.453975 | 2.1:+16990471 | None:intergenic |
| AAAGATCCTTATAGTAGTGC+CGG | 0.462281 | 2.1:-16988223 | MS.gene35332:CDS |
| TAGGAGTGGGATTGATAGAA+TGG | 0.473688 | 2.1:+16992444 | None:intergenic |
| ACTAAAAGAGCTTTAAAGGT+TGG | 0.474337 | 2.1:+16992131 | None:intergenic |
| GGTCCAGAACAAGCAATAGA+TGG | 0.474492 | 2.1:-16992191 | MS.gene35332:CDS |
| AACTCCCCAGTAGTCGTGAT+TGG | 0.475352 | 2.1:-16991825 | MS.gene35332:CDS |
| ATGGTGATGCCTTTCGCTAT+AGG | 0.480405 | 2.1:-16988975 | MS.gene35332:CDS |
| GCTCCAATATTTGTCTACTT+GGG | 0.484351 | 2.1:-16992212 | MS.gene35332:CDS |
| AGCAATAGATGGTTCTCCTA+AGG | 0.489568 | 2.1:-16992180 | MS.gene35332:CDS |
| ATCCTCCAATCACGACTACT+GGG | 0.489793 | 2.1:+16991820 | None:intergenic |
| GCCATGTGAACAAGTTGAAA+TGG | 0.491904 | 2.1:+16992486 | None:intergenic |
| AATTTAGACATGCAGTGAAA+TGG | 0.492903 | 2.1:-16988994 | MS.gene35332:intron |
| GTTGTGGCTTACAAGGGAAA+TGG | 0.503894 | 2.1:-16990387 | MS.gene35332:CDS |
| AAATATCCTCACTTGGCCAT+TGG | 0.510773 | 2.1:-16991461 | MS.gene35332:CDS |
| TTCAAGAATGCAAACACACT+TGG | 0.510819 | 2.1:-16991924 | MS.gene35332:CDS |
| AGACGAGGCCAAAGCACCAA+TGG | 0.515427 | 2.1:+16991445 | None:intergenic |
| ATCAATTTCAAATATTGGGG+TGG | 0.520871 | 2.1:-16992248 | MS.gene35332:CDS |
| ATATCATCAAAGTAGAGGAT+TGG | 0.521474 | 2.1:+16991419 | None:intergenic |
| AAAGTAGCGTCGCAGCCAAA+TGG | 0.523922 | 2.1:-16990869 | MS.gene35332:CDS |
| TAAGATATATTCAGGTGTTG+TGG | 0.531386 | 2.1:-16990403 | MS.gene35332:CDS |
| CACCTGAATATATCTTATCA+AGG | 0.532694 | 2.1:+16990409 | None:intergenic |
| TTGATCAATTTCAAATATTG+GGG | 0.533645 | 2.1:-16992251 | MS.gene35332:CDS |
| GCAATAGATGGTTCTCCTAA+GGG | 0.537093 | 2.1:-16992179 | MS.gene35332:CDS |
| CCTCTGACAACTCAAAAGAA+TGG | 0.537469 | 2.1:+16990538 | None:intergenic |
| GTCGTGATTGGAGGATCATA+TGG | 0.541129 | 2.1:-16991813 | MS.gene35332:CDS |
| ATCAATTCCACTACATATCA+CGG | 0.544440 | 2.1:+16990455 | None:intergenic |
| CTCTTTAAGTCAAAAGGAGA+AGG | 0.546964 | 2.1:+16988933 | None:intergenic |
| AGACAGAAGTGGGTTGGAGA+TGG | 0.550445 | 2.1:-16990329 | MS.gene35332:CDS |
| TGTCAATGAGTGTGTAGGAG+TGG | 0.553790 | 2.1:+16992430 | None:intergenic |
| AAGATCCTTATAGTAGTGCC+GGG | 0.557200 | 2.1:-16988222 | MS.gene35332:CDS |
| AGAAGTGGGTTGGAGATGGC+AGG | 0.557628 | 2.1:-16990325 | MS.gene35332:intron |
| ACCATTTCAACTTGTTCACA+TGG | 0.558388 | 2.1:-16992487 | MS.gene35332:CDS |
| TAGGCTCAAATATCCTCACT+TGG | 0.561155 | 2.1:-16991468 | MS.gene35332:CDS |
| TATCTGAGACAGAAGTGGGT+TGG | 0.562993 | 2.1:-16990335 | MS.gene35332:CDS |
| CCAGTTACCGTGATATGTAG+TGG | 0.564278 | 2.1:-16990462 | MS.gene35332:CDS |
| TGGATTACTACTTATTATGG+AGG | 0.567337 | 2.1:-16988861 | MS.gene35332:CDS |
| GCTTCTTCTCTTGATCCAAA+CGG | 0.572228 | 2.1:+16991948 | None:intergenic |
| TCCCCAGTAGTCGTGATTGG+AGG | 0.577046 | 2.1:-16991822 | MS.gene35332:CDS |
| AAATATATCTGAGACAGAAG+TGG | 0.583630 | 2.1:-16990340 | MS.gene35332:CDS |
| TCGTCGAATGGAGATAACCT+TGG | 0.586295 | 2.1:+16992404 | None:intergenic |
| GTCAATGAGTGTGTAGGAGT+GGG | 0.593257 | 2.1:+16992431 | None:intergenic |
| TATACACAGTGCTTGCTGCA+TGG | 0.596133 | 2.1:-16991493 | MS.gene35332:intron |
| AATATATCTGAGACAGAAGT+GGG | 0.597565 | 2.1:-16990339 | MS.gene35332:CDS |
| AATAAGTAGTAATCCAATGA+GGG | 0.598968 | 2.1:+16988868 | None:intergenic |
| GTAGTAATCCAATGAGGGCG+AGG | 0.600782 | 2.1:+16988873 | None:intergenic |
| GTAGAGGATTGGAGCAGACG+AGG | 0.605838 | 2.1:+16991430 | None:intergenic |
| TCAGGTGTTGTGGCTTACAA+GGG | 0.616951 | 2.1:-16990393 | MS.gene35332:CDS |
| GTATCATTTCCTATAGCGAA+AGG | 0.619045 | 2.1:+16988966 | None:intergenic |
| TAATAAGTAGTAATCCAATG+AGG | 0.619229 | 2.1:+16988867 | None:intergenic |
| ATGTAATATCATCAAAGTAG+AGG | 0.625566 | 2.1:+16991414 | None:intergenic |
| ACTCAAAAGAATGGTTTAAG+GGG | 0.631595 | 2.1:+16990547 | None:intergenic |
| GGTATTGTCAATGAGTGTGT+AGG | 0.656725 | 2.1:+16992425 | None:intergenic |
| AAAGCACCAATGGCCAAGTG+AGG | 0.660296 | 2.1:+16991455 | None:intergenic |
| GTGATTGGAGGATCATATGG+TGG | 0.675642 | 2.1:-16991810 | MS.gene35332:CDS |
| ACGGTAACTGGATAGTCTGG+AGG | 0.692907 | 2.1:+16990474 | None:intergenic |
| CACACTCATTGACAATACCA+AGG | 0.695882 | 2.1:-16992421 | MS.gene35332:CDS |
| TCCTCCAATCACGACTACTG+GGG | 0.724998 | 2.1:+16991821 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATGTATAATAAATAG+AGG | + | chr2.1:16991218-16991237 | None:intergenic | 10.0% |
| !! | AAAAACTAAATAAAAGAATA+CGG | + | chr2.1:16989148-16989167 | None:intergenic | 10.0% |
| !! | ATAATGTTATATATTAATGT+AGG | + | chr2.1:16991990-16992009 | None:intergenic | 10.0% |
| !!! | AAAAAATTAGTTTATTTACA+GGG | + | chr2.1:16989410-16989429 | None:intergenic | 10.0% |
| !!! | CTAATTTTTTCTTTAAAATT+TGG | - | chr2.1:16989420-16989439 | MS.gene35332:intron | 10.0% |
| !! | AAAAAAAGACATTTAAATCA+AGG | + | chr2.1:16992295-16992314 | None:intergenic | 15.0% |
| !! | AAACAAAACAAAAAATTACA+AGG | - | chr2.1:16989650-16989669 | MS.gene35332:intron | 15.0% |
| !! | AACGTTAAATTATTAAATGT+TGG | - | chr2.1:16990070-16990089 | MS.gene35332:intron | 15.0% |
| !! | AATCTTAATCATAACATAAA+GGG | + | chr2.1:16989101-16989120 | None:intergenic | 15.0% |
| !! | ATTTGATCAATTTCAAATAT+TGG | - | chr2.1:16988460-16988479 | MS.gene35332:intron | 15.0% |
| !! | TTTGATCAATTTCAAATATT+GGG | - | chr2.1:16988461-16988480 | MS.gene35332:intron | 15.0% |
| !!! | AAAGTCTTATTTTTTTAATG+CGG | + | chr2.1:16990527-16990546 | None:intergenic | 15.0% |
| !!! | AAATCTATTCATTTTGAAAT+TGG | + | chr2.1:16989562-16989581 | None:intergenic | 15.0% |
| !!! | ATTGTTACATTTTTCTTTTT+TGG | + | chr2.1:16992373-16992392 | None:intergenic | 15.0% |
| !!! | ATTTAACGTTTTTTTTTTTG+TGG | + | chr2.1:16990060-16990079 | None:intergenic | 15.0% |
| !!! | GAAAAAATTAGTTTATTTAC+AGG | + | chr2.1:16989411-16989430 | None:intergenic | 15.0% |
| !!! | GACAATTTTTTTTCATAAAA+GGG | + | chr2.1:16991136-16991155 | None:intergenic | 15.0% |
| !!! | GATTTAAATGTCTTTTTTTA+AGG | - | chr2.1:16992296-16992315 | MS.gene35332:CDS | 15.0% |
| !!! | TAACTAATTAATTCATTTTC+AGG | - | chr2.1:16989768-16989787 | MS.gene35332:intron | 15.0% |
| !!! | TAATAATTTTATATCAGCAT+CGG | - | chr2.1:16988724-16988743 | MS.gene35332:intron | 15.0% |
| !!! | TTTTTATCTTTGCATATATA+TGG | - | chr2.1:16991665-16991684 | MS.gene35332:intron | 15.0% |
| !! | AAAAAAATATTGCTAGCAAA+GGG | + | chr2.1:16988645-16988664 | None:intergenic | 20.0% |
| !! | AACTTTCTGTCAATTTATAT+CGG | - | chr2.1:16990959-16990978 | MS.gene35332:intron | 20.0% |
| !! | AATGTACTTGAAAATAACAA+AGG | + | chr2.1:16991174-16991193 | None:intergenic | 20.0% |
| !! | AATTATTACATCAAAGAAAG+AGG | - | chr2.1:16991957-16991976 | MS.gene35332:CDS | 20.0% |
| !! | AGTCAAATAAATGCAATAAT+TGG | - | chr2.1:16991429-16991448 | MS.gene35332:CDS | 20.0% |
| !! | ATGTACTTGAAAATAACAAA+GGG | + | chr2.1:16991173-16991192 | None:intergenic | 20.0% |
| !! | CAATCTTAATCATAACATAA+AGG | + | chr2.1:16989102-16989121 | None:intergenic | 20.0% |
| !! | TAAAAAAATATTGCTAGCAA+AGG | + | chr2.1:16988646-16988665 | None:intergenic | 20.0% |
| !! | TAGACAATCTAAATTAATGT+AGG | + | chr2.1:16992085-16992104 | None:intergenic | 20.0% |
| !! | TGACTAAATCAAAACAATAA+TGG | - | chr2.1:16989587-16989606 | MS.gene35332:intron | 20.0% |
| !! | TGGTAATAAAAAACAAACAA+AGG | + | chr2.1:16989943-16989962 | None:intergenic | 20.0% |
| !! | TTGATCAATTTCAAATATTG+GGG | - | chr2.1:16988462-16988481 | MS.gene35332:intron | 20.0% |
| !!! | AACACTTTTTGTTTTGTTTT+TGG | + | chr2.1:16989613-16989632 | None:intergenic | 20.0% |
| !!! | AAGTCTTATTTTTTTAATGC+GGG | + | chr2.1:16990526-16990545 | None:intergenic | 20.0% |
| !!! | AATATGTAACATTGATTAGA+GGG | - | chr2.1:16991553-16991572 | MS.gene35332:intron | 20.0% |
| !!! | AATTTTAGTCCTTATTTTGA+GGG | - | chr2.1:16989504-16989523 | MS.gene35332:intron | 20.0% |
| !!! | ACAAGAAATTAATTTTGTTG+TGG | - | chr2.1:16992394-16992413 | MS.gene35332:CDS | 20.0% |
| !!! | ATATACTAAAAGAGCTTTAA+AGG | + | chr2.1:16988589-16988608 | None:intergenic | 20.0% |
| !!! | ATATGTTTTATATTCTCTCT+AGG | + | chr2.1:16990850-16990869 | None:intergenic | 20.0% |
| !!! | CCTTATAAAATTGATTTAAC+CGG | + | chr2.1:16990819-16990838 | None:intergenic | 20.0% |
| !!! | GGACAATTTTTTTTCATAAA+AGG | + | chr2.1:16991137-16991156 | None:intergenic | 20.0% |
| !!! | TAAAATGTTTCAACATCTTT+TGG | + | chr2.1:16988375-16988394 | None:intergenic | 20.0% |
| !!! | TAAAGGGTTTTGAATTTTTT+TGG | + | chr2.1:16989085-16989104 | None:intergenic | 20.0% |
| !!! | TAATGAAAGTATGTTTATAC+TGG | + | chr2.1:16989903-16989922 | None:intergenic | 20.0% |
| !!! | TAATTTTAGTCCTTATTTTG+AGG | - | chr2.1:16989503-16989522 | MS.gene35332:intron | 20.0% |
| !!! | TACCATATATGTTTTTATGT+TGG | + | chr2.1:16990627-16990646 | None:intergenic | 20.0% |
| !!! | TTAAATGTATTATAGCTTTG+TGG | + | chr2.1:16988432-16988451 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTTATTACCAAAC+AGG | - | chr2.1:16989946-16989965 | MS.gene35332:intron | 20.0% |
| ! | AACTCAAAAGAATGGTTTAA+GGG | + | chr2.1:16990170-16990189 | None:intergenic | 25.0% |
| ! | AATAAGTAGTAATCCAATGA+GGG | + | chr2.1:16991848-16991867 | None:intergenic | 25.0% |
| ! | ACAAATCTCTTTAAGTCAAA+AGG | + | chr2.1:16991789-16991808 | None:intergenic | 25.0% |
| ! | ATCCTTGATAAGATATATTC+AGG | - | chr2.1:16990302-16990321 | MS.gene35332:intron | 25.0% |
| ! | ATGAAACAATATTGAACTCT+TGG | - | chr2.1:16989809-16989828 | MS.gene35332:intron | 25.0% |
| ! | ATGTAATATCATCAAAGTAG+AGG | + | chr2.1:16989302-16989321 | None:intergenic | 25.0% |
| ! | CATTGGATTACTACTTATTA+TGG | - | chr2.1:16991849-16991868 | MS.gene35332:CDS | 25.0% |
| ! | CTAAAAGTTGTATGTTTACA+AGG | + | chr2.1:16989471-16989490 | None:intergenic | 25.0% |
| ! | GATAATGCATAATATATGCA+AGG | - | chr2.1:16990007-16990026 | MS.gene35332:intron | 25.0% |
| ! | GGTAAAAATGTCTAAATTGT+TGG | - | chr2.1:16990469-16990488 | MS.gene35332:CDS | 25.0% |
| ! | GTAGCAATTATACTAAAATG+TGG | - | chr2.1:16991403-16991422 | MS.gene35332:CDS | 25.0% |
| ! | GTCCAACATAAAAACATATA+TGG | - | chr2.1:16990622-16990641 | MS.gene35332:intron | 25.0% |
| ! | TAATAAGTAGTAATCCAATG+AGG | + | chr2.1:16991849-16991868 | None:intergenic | 25.0% |
| ! | TATGATTAAGATTGTGATTG+TGG | - | chr2.1:16989108-16989127 | MS.gene35332:intron | 25.0% |
| ! | TGTACTTGAAAATAACAAAG+GGG | + | chr2.1:16991172-16991191 | None:intergenic | 25.0% |
| ! | TTGTATAAAAGTCAATTGCT+TGG | - | chr2.1:16991507-16991526 | MS.gene35332:intron | 25.0% |
| !! | AGAAAAAAGAAGTACAAACA+TGG | + | chr2.1:16991878-16991897 | None:intergenic | 25.0% |
| !! | AGCAACATTATATTTTCGAA+TGG | - | chr2.1:16992463-16992482 | MS.gene35332:CDS | 25.0% |
| !! | AGCTCTTTTAGTATATATAG+AGG | - | chr2.1:16988593-16988612 | MS.gene35332:intron | 25.0% |
| !! | CCGGTTAAATCAATTTTATA+AGG | - | chr2.1:16990816-16990835 | MS.gene35332:intron | 25.0% |
| !! | GAATATGTAACATTGATTAG+AGG | - | chr2.1:16991552-16991571 | MS.gene35332:intron | 25.0% |
| !! | TATCTTAATTCCTGTGATTT+TGG | - | chr2.1:16991349-16991368 | MS.gene35332:intron | 25.0% |
| !! | TCTGTCTCAGATATATTTTT+GGG | + | chr2.1:16990371-16990390 | None:intergenic | 25.0% |
| !! | TTCTGTCTCAGATATATTTT+TGG | + | chr2.1:16990372-16990391 | None:intergenic | 25.0% |
| !! | TTTTTCCTAACAATAACATC+CGG | + | chr2.1:16990496-16990515 | None:intergenic | 25.0% |
| !!! | AATTTTAGTCCCTCAAAATA+AGG | + | chr2.1:16989516-16989535 | None:intergenic | 25.0% |
| !!! | TAACGTTTTTTTTTTTGTGG+TGG | + | chr2.1:16990057-16990076 | None:intergenic | 25.0% |
| !!! | TATAGGATTTTTGGTAGAAA+AGG | - | chr2.1:16988557-16988576 | MS.gene35332:intron | 25.0% |
| !!! | TTTTGACTTAAAGAGATTTG+TGG | - | chr2.1:16991788-16991807 | MS.gene35332:intron | 25.0% |
| AAACGAGTTCTTCAAAAGTT+TGG | - | chr2.1:16992439-16992458 | MS.gene35332:CDS | 30.0% | |
| AAACTAACTCTCTCTCTTAA+AGG | - | chr2.1:16991273-16991292 | MS.gene35332:intron | 30.0% | |
| AAATGTCTAAATTGTTGGAC+CGG | - | chr2.1:16990474-16990493 | MS.gene35332:CDS | 30.0% | |
| AACAAAGGGGTCATATAAAA+AGG | + | chr2.1:16991159-16991178 | None:intergenic | 30.0% | |
| AATCACAGGAATTAAGATAG+TGG | + | chr2.1:16991348-16991367 | None:intergenic | 30.0% | |
| AATTTAGACATGCAGTGAAA+TGG | - | chr2.1:16991719-16991738 | MS.gene35332:intron | 30.0% | |
| ACAAAGGGGTCATATAAAAA+GGG | + | chr2.1:16991158-16991177 | None:intergenic | 30.0% | |
| ACAACATCGAAATAAGCATT+TGG | + | chr2.1:16989327-16989346 | None:intergenic | 30.0% | |
| ACCAGTTGAGTTAGAATTTA+TGG | + | chr2.1:16990452-16990471 | None:intergenic | 30.0% | |
| ACTCAAAAGAATGGTTTAAG+GGG | + | chr2.1:16990169-16990188 | None:intergenic | 30.0% | |
| AGGACTAATAATTTCCTGTT+TGG | + | chr2.1:16989963-16989982 | None:intergenic | 30.0% | |
| ATATCATCAAAGTAGAGGAT+TGG | + | chr2.1:16989297-16989316 | None:intergenic | 30.0% | |
| ATCAATTCCACTACATATCA+CGG | + | chr2.1:16990261-16990280 | None:intergenic | 30.0% | |
| ATCAATTTCAAATATTGGGG+TGG | - | chr2.1:16988465-16988484 | MS.gene35332:intron | 30.0% | |
| CAACTCAAAAGAATGGTTTA+AGG | + | chr2.1:16990171-16990190 | None:intergenic | 30.0% | |
| CACCTGAATATATCTTATCA+AGG | + | chr2.1:16990307-16990326 | None:intergenic | 30.0% | |
| CTAAGAATTGAAAGACCATT+TGG | + | chr2.1:16989862-16989881 | None:intergenic | 30.0% | |
| GAAAGATGCAAGAAAGAATA+TGG | - | chr2.1:16991810-16991829 | MS.gene35332:CDS | 30.0% | |
| GAATGGATGAAAAATATGAG+AGG | + | chr2.1:16988255-16988274 | None:intergenic | 30.0% | |
| TATATCAAGCTATAAGCACT+AGG | + | chr2.1:16990925-16990944 | None:intergenic | 30.0% | |
| TATGGAAAATCAATACCGTT+TGG | - | chr2.1:16988750-16988769 | MS.gene35332:intron | 30.0% | |
| TCCATAAATTCTAACTCAAC+TGG | - | chr2.1:16990448-16990467 | MS.gene35332:CDS | 30.0% | |
| TGGATTACTACTTATTATGG+AGG | - | chr2.1:16991852-16991871 | MS.gene35332:CDS | 30.0% | |
| TTACCATGTAACCTCAAATA+TGG | - | chr2.1:16989041-16989060 | MS.gene35332:intron | 30.0% | |
| ! | AAATATATCTGAGACAGAAG+TGG | - | chr2.1:16990373-16990392 | MS.gene35332:CDS | 30.0% |
| ! | AAGGGTCTTATAATTAGAGA+CGG | + | chr2.1:16991118-16991137 | None:intergenic | 30.0% |
| ! | AATATATCTGAGACAGAAGT+GGG | - | chr2.1:16990374-16990393 | MS.gene35332:CDS | 30.0% |
| ! | GCAAAAGGGTCTTATATATA+AGG | - | chr2.1:16991371-16991390 | MS.gene35332:intron | 30.0% |
| ! | GGAATTGATAAAGCTTCTTT+TGG | - | chr2.1:16990272-16990291 | MS.gene35332:intron | 30.0% |
| ! | GGTTACATGGTAACATTTTA+TGG | + | chr2.1:16989034-16989053 | None:intergenic | 30.0% |
| ! | TAAGATATATTCAGGTGTTG+TGG | - | chr2.1:16990310-16990329 | MS.gene35332:intron | 30.0% |
| !! | ACTAAAAGAGCTTTAAAGGT+TGG | + | chr2.1:16988585-16988604 | None:intergenic | 30.0% |
| !! | CTGTCTCAGATATATTTTTG+GGG | + | chr2.1:16990370-16990389 | None:intergenic | 30.0% |
| !! | TTATATCAGCATCGGTATTA+TGG | - | chr2.1:16988732-16988751 | MS.gene35332:intron | 30.0% |
| !!! | CACACTTGGATATTTTAACT+CGG | - | chr2.1:16988803-16988822 | MS.gene35332:intron | 30.0% |
| !!! | TTTAAGGTTTTTTCGTCGAA+TGG | + | chr2.1:16988324-16988343 | None:intergenic | 30.0% |
| !!! | TTTGTTGTGGTTTTGACTAA+TGG | - | chr2.1:16992407-16992426 | MS.gene35332:CDS | 30.0% |
| AAAGATCCTTATAGTAGTGC+CGG | - | chr2.1:16992490-16992509 | MS.gene35332:CDS | 35.0% | |
| AAATGTGACTCATTGTGAGA+TGG | - | chr2.1:16991619-16991638 | MS.gene35332:intron | 35.0% | |
| ACCAAAAATCCTATACCCTT+AGG | + | chr2.1:16988552-16988571 | None:intergenic | 35.0% | |
| AGCAATCACAACCATATTTG+AGG | + | chr2.1:16989055-16989074 | None:intergenic | 35.0% | |
| ATGCTCATAACTATTGAGCT+TGG | + | chr2.1:16990705-16990724 | None:intergenic | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | - | chr2.1:16990014-16990033 | MS.gene35332:intron | 35.0% | |
| CTCAATAGTTATGAGCATGA+GGG | - | chr2.1:16990707-16990726 | MS.gene35332:intron | 35.0% | |
| CTCTTTAAGTCAAAAGGAGA+AGG | + | chr2.1:16991783-16991802 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | - | chr2.1:16990013-16990032 | MS.gene35332:intron | 35.0% | |
| GCTCCAATATTTGTCTACTT+GGG | - | chr2.1:16988501-16988520 | MS.gene35332:intron | 35.0% | |
| GCTTTGTAAGGATGTGTTAT+AGG | - | chr2.1:16990600-16990619 | MS.gene35332:intron | 35.0% | |
| GTATCATTTCCTATAGCGAA+AGG | + | chr2.1:16991750-16991769 | None:intergenic | 35.0% | |
| TCAATAGTTATGAGCATGAG+GGG | - | chr2.1:16990708-16990727 | MS.gene35332:intron | 35.0% | |
| TGAGCTTAACTCAGTTGTTA+AGG | - | chr2.1:16989985-16990004 | MS.gene35332:intron | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | - | chr2.1:16990012-16990031 | MS.gene35332:intron | 35.0% | |
| TGCTCCAATATTTGTCTACT+TGG | - | chr2.1:16988500-16988519 | MS.gene35332:intron | 35.0% | |
| TTCAAGAATGCAAACACACT+TGG | - | chr2.1:16988789-16988808 | MS.gene35332:intron | 35.0% | |
| ! | ACCATTTCAACTTGTTCACA+TGG | - | chr2.1:16988226-16988245 | MS.gene35332:CDS | 35.0% |
| ! | AGAGTTCTGTCTTTTCAATG+TGG | + | chr2.1:16990755-16990774 | None:intergenic | 35.0% |
| ! | CAACCATATTTGAGGTTACA+TGG | + | chr2.1:16989047-16989066 | None:intergenic | 35.0% |
| ! | GAGTTCTGTCTTTTCAATGT+GGG | + | chr2.1:16990754-16990773 | None:intergenic | 35.0% |
| ! | GGTCTTATATATAAGGACGT+AGG | - | chr2.1:16991378-16991397 | MS.gene35332:CDS | 35.0% |
| ! | TTCAACATCTTTTGGATCAG+TGG | + | chr2.1:16988367-16988386 | None:intergenic | 35.0% |
| !! | ACAACAAAACTCTAGAGTGT+TGG | - | chr2.1:16990102-16990121 | MS.gene35332:intron | 35.0% |
| !! | ATTCCTGTGATTTTGGCAAA+AGG | - | chr2.1:16991356-16991375 | MS.gene35332:intron | 35.0% |
| !! | ATTGATTTAACCGGCTTGTA+AGG | + | chr2.1:16990810-16990829 | None:intergenic | 35.0% |
| !! | TCCTAAGGGTATAGGATTTT+TGG | - | chr2.1:16988548-16988567 | MS.gene35332:intron | 35.0% |
| !! | TTCCTGTGATTTTGGCAAAA+GGG | - | chr2.1:16991357-16991376 | MS.gene35332:intron | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGTCG+AGG | + | chr2.1:16990051-16990070 | None:intergenic | 35.0% |
| AAATATCCTCACTTGGCCAT+TGG | - | chr2.1:16989252-16989271 | MS.gene35332:intron | 40.0% | |
| AAGATCCTTATAGTAGTGCC+GGG | - | chr2.1:16992491-16992510 | MS.gene35332:CDS | 40.0% | |
| ACCTTACAAGTCGCTTAAGA+TGG | - | chr2.1:16990578-16990597 | MS.gene35332:intron | 40.0% | |
| AGCAATAGATGGTTCTCCTA+AGG | - | chr2.1:16988533-16988552 | MS.gene35332:intron | 40.0% | |
| CACACTCATTGACAATACCA+AGG | - | chr2.1:16988292-16988311 | MS.gene35332:intron | 40.0% | |
| CACTCATTGTAGCAAAGAGA+GGG | + | chr2.1:16991036-16991055 | None:intergenic | 40.0% | |
| CCTCTGACAACTCAAAAGAA+TGG | + | chr2.1:16990178-16990197 | None:intergenic | 40.0% | |
| CTTAAACGACATTGCAACCT+TGG | - | chr2.1:16988338-16988357 | MS.gene35332:intron | 40.0% | |
| GAACCATCTATTGCTTGTTC+TGG | + | chr2.1:16988528-16988547 | None:intergenic | 40.0% | |
| GCAATAGATGGTTCTCCTAA+GGG | - | chr2.1:16988534-16988553 | MS.gene35332:intron | 40.0% | |
| GCTCAATAGTTATGAGCATG+AGG | - | chr2.1:16990706-16990725 | MS.gene35332:intron | 40.0% | |
| GCTTCTTCTCTTGATCCAAA+CGG | + | chr2.1:16988768-16988787 | None:intergenic | 40.0% | |
| GGACCCAAGTAGACAAATAT+TGG | + | chr2.1:16988507-16988526 | None:intergenic | 40.0% | |
| GGTATTGTCAATGAGTGTGT+AGG | + | chr2.1:16988291-16988310 | None:intergenic | 40.0% | |
| TAGGAGTGGGATTGATAGAA+TGG | + | chr2.1:16988272-16988291 | None:intergenic | 40.0% | |
| TAGGCTCAAATATCCTCACT+TGG | - | chr2.1:16989245-16989264 | MS.gene35332:intron | 40.0% | |
| TCACTCATTGTAGCAAAGAG+AGG | + | chr2.1:16991037-16991056 | None:intergenic | 40.0% | |
| TTGGACCGGATGTTATTGTT+AGG | - | chr2.1:16990488-16990507 | MS.gene35332:CDS | 40.0% | |
| ! | CAAGGTTGCAATGTCGTTTA+AGG | + | chr2.1:16988340-16988359 | None:intergenic | 40.0% |
| ! | GCCATGTGAACAAGTTGAAA+TGG | + | chr2.1:16988230-16988249 | None:intergenic | 40.0% |
| ! | GGTATCAAGTCTTATCGATC+AGG | - | chr2.1:16990643-16990662 | MS.gene35332:intron | 40.0% |
| ! | GGTCTTATAATTAGAGACGG+AGG | + | chr2.1:16991115-16991134 | None:intergenic | 40.0% |
| ! | TTTTGGATCAGTGGAAACCA+AGG | + | chr2.1:16988358-16988377 | None:intergenic | 40.0% |
| !! | TCGCTTAAGATGGCTTTGTA+AGG | - | chr2.1:16990588-16990607 | MS.gene35332:intron | 40.0% |
| !! | TGTTCTGAGGACAATGGTTA+AGG | + | chr2.1:16992253-16992272 | None:intergenic | 40.0% |
| !!! | CCATTCTTTTGAGTTGTCAG+AGG | - | chr2.1:16990175-16990194 | MS.gene35332:intron | 40.0% |
| !!! | TTGTGGTTTTGACTAATGGC+AGG | - | chr2.1:16992411-16992430 | MS.gene35332:CDS | 40.0% |
| !!! | TTTTGAGTTGTCAGAGGACT+TGG | - | chr2.1:16990181-16990200 | MS.gene35332:intron | 40.0% |
| ACAACTGAGTTAAGCTCACG+AGG | + | chr2.1:16989983-16990002 | None:intergenic | 45.0% | |
| ATCACGGTAACTGGATAGTC+TGG | + | chr2.1:16990245-16990264 | None:intergenic | 45.0% | |
| ATCCTCCAATCACGACTACT+GGG | + | chr2.1:16988896-16988915 | None:intergenic | 45.0% | |
| CCACTACATATCACGGTAAC+TGG | + | chr2.1:16990254-16990273 | None:intergenic | 45.0% | |
| CCAGTTACCGTGATATGTAG+TGG | - | chr2.1:16990251-16990270 | MS.gene35332:intron | 45.0% | |
| CTTAAGCGACTTGTAAGGTG+AGG | + | chr2.1:16990577-16990596 | None:intergenic | 45.0% | |
| GCCATCTTAAGCGACTTGTA+AGG | + | chr2.1:16990582-16990601 | None:intergenic | 45.0% | |
| GGTCCAGAACAAGCAATAGA+TGG | - | chr2.1:16988522-16988541 | MS.gene35332:intron | 45.0% | |
| GTCAATGAGTGTGTAGGAGT+GGG | + | chr2.1:16988285-16988304 | None:intergenic | 45.0% | |
| GTCGTGATTGGAGGATCATA+TGG | - | chr2.1:16988900-16988919 | MS.gene35332:CDS | 45.0% | |
| GTGATTGGAGGATCATATGG+TGG | - | chr2.1:16988903-16988922 | MS.gene35332:CDS | 45.0% | |
| GTTGTGGCTTACAAGGGAAA+TGG | - | chr2.1:16990326-16990345 | MS.gene35332:CDS | 45.0% | |
| TCGTCGAATGGAGATAACCT+TGG | + | chr2.1:16988312-16988331 | None:intergenic | 45.0% | |
| TGCTCTCAGAGTAGTGGTTA+AGG | - | chr2.1:16992132-16992151 | MS.gene35332:CDS | 45.0% | |
| TGTCAATGAGTGTGTAGGAG+TGG | + | chr2.1:16988286-16988305 | None:intergenic | 45.0% | |
| TTAACCAGTGTCGTGTTCTG+AGG | + | chr2.1:16992266-16992285 | None:intergenic | 45.0% | |
| ! | ATGGTGATGCCTTTCGCTAT+AGG | - | chr2.1:16991738-16991757 | MS.gene35332:intron | 45.0% |
| ! | GACCCTTTTGCCAAAATCAC+AGG | + | chr2.1:16991362-16991381 | None:intergenic | 45.0% |
| ! | GATGGTTCTCCTAAGGGTAT+AGG | - | chr2.1:16988540-16988559 | MS.gene35332:intron | 45.0% |
| ! | TATACACAGTGCTTGCTGCA+TGG | - | chr2.1:16989220-16989239 | MS.gene35332:intron | 45.0% |
| ! | TATCTGAGACAGAAGTGGGT+TGG | - | chr2.1:16990378-16990397 | MS.gene35332:CDS | 45.0% |
| ! | TATGAGCATGAGGGGTGTAT+TGG | - | chr2.1:16990716-16990735 | MS.gene35332:intron | 45.0% |
| ! | TCAGGTGTTGTGGCTTACAA+GGG | - | chr2.1:16990320-16990339 | MS.gene35332:intron | 45.0% |
| ! | TTCAGGTGTTGTGGCTTACA+AGG | - | chr2.1:16990319-16990338 | MS.gene35332:intron | 45.0% |
| !! | TGCTTGGTGCGTGAATATGT+AGG | + | chr2.1:16990672-16990691 | None:intergenic | 45.0% |
| !! | TTTAACCGGCTTGTAAGGTG+AGG | + | chr2.1:16990805-16990824 | None:intergenic | 45.0% |
| !! | AAAAAAATTATATATTTGTA+GGG | - | chr2.1:16989688-16989707 | MS.gene35332:intron | 5.0% |
| !! | TAAAAAAATTATATATTTGT+AGG | - | chr2.1:16989687-16989706 | MS.gene35332:intron | 5.0% |
| !!! | TTATTTTATTTAGAATAATT+TGG | - | chr2.1:16989732-16989751 | MS.gene35332:intron | 5.0% |
| AAAGTAGCGTCGCAGCCAAA+TGG | - | chr2.1:16989844-16989863 | MS.gene35332:intron | 50.0% | |
| AACCAGTGCTCTCAGAGTAG+TGG | - | chr2.1:16992126-16992145 | MS.gene35332:CDS | 50.0% | |
| AACTCCCCAGTAGTCGTGAT+TGG | - | chr2.1:16988888-16988907 | MS.gene35332:CDS | 50.0% | |
| ACGGTAACTGGATAGTCTGG+AGG | + | chr2.1:16990242-16990261 | None:intergenic | 50.0% | |
| ACGTTCCTCACCTTACAAGC+CGG | - | chr2.1:16990797-16990816 | MS.gene35332:intron | 50.0% | |
| GATCCTCCAATCACGACTAC+TGG | + | chr2.1:16988897-16988916 | None:intergenic | 50.0% | |
| GTAGTAATCCAATGAGGGCG+AGG | + | chr2.1:16991843-16991862 | None:intergenic | 50.0% | |
| TCCTCCAATCACGACTACTG+GGG | + | chr2.1:16988895-16988914 | None:intergenic | 50.0% | |
| TTGTCCTCAGAACACGACAC+TGG | - | chr2.1:16992259-16992278 | MS.gene35332:CDS | 50.0% | |
| ! | AAAGCACCAATGGCCAAGTG+AGG | + | chr2.1:16989261-16989280 | None:intergenic | 50.0% |
| ! | AACCACTACTCTGAGAGCAC+TGG | + | chr2.1:16992131-16992150 | None:intergenic | 50.0% |
| ! | CACGACTACTGGGGAGTTTT+GGG | + | chr2.1:16988886-16988905 | None:intergenic | 50.0% |
| ! | CAGTGCTTGCTGCATGGTTT+AGG | - | chr2.1:16989226-16989245 | MS.gene35332:intron | 50.0% |
| ! | TCACGACTACTGGGGAGTTT+TGG | + | chr2.1:16988887-16988906 | None:intergenic | 50.0% |
| ! | TCACTTGGCCATTGGTGCTT+TGG | - | chr2.1:16989260-16989279 | MS.gene35332:intron | 50.0% |
| !! | AGACAGAAGTGGGTTGGAGA+TGG | - | chr2.1:16990384-16990403 | MS.gene35332:CDS | 50.0% |
| !! | GCTTGGTGCGTGAATATGCT+TGG | + | chr2.1:16990688-16990707 | None:intergenic | 50.0% |
| !! | GTGTCGTGTTCTGAGGACAA+TGG | + | chr2.1:16992259-16992278 | None:intergenic | 50.0% |
| GTAGAGGATTGGAGCAGACG+AGG | + | chr2.1:16989286-16989305 | None:intergenic | 55.0% | |
| TCCCCAGTAGTCGTGATTGG+AGG | - | chr2.1:16988891-16988910 | MS.gene35332:CDS | 55.0% | |
| ! | AGACGAGGCCAAAGCACCAA+TGG | + | chr2.1:16989271-16989290 | None:intergenic | 55.0% |
| !! | AGAAGTGGGTTGGAGATGGC+AGG | - | chr2.1:16990388-16990407 | MS.gene35332:CDS | 55.0% |
| GTGTCTCACCTCGCCCTCAT+TGG | - | chr2.1:16991832-16991851 | MS.gene35332:CDS | 60.0% | |
| TGCGCGCACGCGTTTGTGTT+CGG | + | chr2.1:16988965-16988984 | None:intergenic | 60.0% | |
| GCGCGCACGCGTTTGTGTTC+GGG | + | chr2.1:16988964-16988983 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 16988219 | 16992516 | 16988219 | ID=MS.gene35332 |
| chr2.1 | mRNA | 16988219 | 16992516 | 16988219 | ID=MS.gene35332.t1;Parent=MS.gene35332 |
| chr2.1 | exon | 16992121 | 16992516 | 16992121 | ID=MS.gene35332.t1.exon1;Parent=MS.gene35332.t1 |
| chr2.1 | CDS | 16992121 | 16992516 | 16992121 | ID=cds.MS.gene35332.t1;Parent=MS.gene35332.t1 |
| chr2.1 | exon | 16991808 | 16991994 | 16991808 | ID=MS.gene35332.t1.exon2;Parent=MS.gene35332.t1 |
| chr2.1 | CDS | 16991808 | 16991994 | 16991808 | ID=cds.MS.gene35332.t1;Parent=MS.gene35332.t1 |
| chr2.1 | exon | 16991373 | 16991506 | 16991373 | ID=MS.gene35332.t1.exon3;Parent=MS.gene35332.t1 |
| chr2.1 | CDS | 16991373 | 16991506 | 16991373 | ID=cds.MS.gene35332.t1;Parent=MS.gene35332.t1 |
| chr2.1 | exon | 16990833 | 16990945 | 16990833 | ID=MS.gene35332.t1.exon4;Parent=MS.gene35332.t1 |
| chr2.1 | CDS | 16990833 | 16990945 | 16990833 | ID=cds.MS.gene35332.t1;Parent=MS.gene35332.t1 |
| chr2.1 | exon | 16990326 | 16990569 | 16990326 | ID=MS.gene35332.t1.exon5;Parent=MS.gene35332.t1 |
| chr2.1 | CDS | 16990326 | 16990569 | 16990326 | ID=cds.MS.gene35332.t1;Parent=MS.gene35332.t1 |
| chr2.1 | exon | 16988857 | 16989009 | 16988857 | ID=MS.gene35332.t1.exon6;Parent=MS.gene35332.t1 |
| chr2.1 | CDS | 16988857 | 16989009 | 16988857 | ID=cds.MS.gene35332.t1;Parent=MS.gene35332.t1 |
| chr2.1 | exon | 16988219 | 16988302 | 16988219 | ID=MS.gene35332.t1.exon7;Parent=MS.gene35332.t1 |
| chr2.1 | CDS | 16988219 | 16988302 | 16988219 | ID=cds.MS.gene35332.t1;Parent=MS.gene35332.t1 |
| Gene Sequence |
| Protein sequence |
