Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44789.t1 | XP_013447726.1 | 99.6 | 715 | 3 | 0 | 1 | 715 | 1 | 715 | 0.00E+00 | 1134.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44789.t1 | Q9M1H3 | 74.3 | 724 | 176 | 3 | 1 | 715 | 1 | 723 | 1.9e-276 | 953.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44789.t1 | A0A072TXB0 | 99.6 | 715 | 3 | 0 | 1 | 715 | 1 | 715 | 0.0e+00 | 1134.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050084 | MS.gene44789 | 0.816175 | 6.33E-52 | -1.69E-46 |
MS.gene050085 | MS.gene44789 | 0.827623 | 1.41E-54 | -1.69E-46 |
MS.gene053058 | MS.gene44789 | 0.805329 | 1.41E-49 | -1.69E-46 |
MS.gene058054 | MS.gene44789 | 0.808323 | 3.28E-50 | -1.69E-46 |
MS.gene059007 | MS.gene44789 | 0.816853 | 4.46E-52 | -1.69E-46 |
MS.gene060563 | MS.gene44789 | 0.808287 | 3.34E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene44789 | MS.gene98065 | PPI |
MS.gene69745 | MS.gene44789 | PPI |
MS.gene31234 | MS.gene44789 | PPI |
MS.gene028666 | MS.gene44789 | PPI |
MS.gene25771 | MS.gene44789 | PPI |
MS.gene70530 | MS.gene44789 | PPI |
MS.gene054719 | MS.gene44789 | PPI |
MS.gene44789 | MS.gene044268 | PPI |
MS.gene44789 | MS.gene050086 | PPI |
MS.gene40858 | MS.gene44789 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44789.t1 | MTR_7g018380 | 99.580 | 715 | 3 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1450 |
MS.gene44789.t1 | MTR_8g075040 | 98.462 | 715 | 9 | 1 | 1 | 715 | 54 | 766 | 0.0 | 1432 |
MS.gene44789.t1 | MTR_1g066620 | 91.800 | 561 | 44 | 2 | 156 | 715 | 2 | 561 | 0.0 | 1060 |
MS.gene44789.t1 | MTR_3g080970 | 40.416 | 673 | 351 | 16 | 41 | 702 | 74 | 707 | 6.90e-156 | 468 |
MS.gene44789.t1 | MTR_2g095440 | 41.561 | 551 | 289 | 7 | 152 | 702 | 62 | 579 | 1.52e-150 | 451 |
MS.gene44789.t1 | MTR_2g095440 | 41.499 | 547 | 287 | 7 | 156 | 702 | 12 | 525 | 1.38e-149 | 446 |
MS.gene44789.t1 | MTR_2g095440 | 41.348 | 549 | 289 | 7 | 154 | 702 | 4 | 519 | 1.62e-149 | 446 |
MS.gene44789.t1 | MTR_4g057795 | 41.155 | 554 | 293 | 6 | 152 | 705 | 62 | 582 | 8.98e-147 | 441 |
MS.gene44789.t1 | MTR_4g057795 | 41.270 | 504 | 263 | 7 | 202 | 705 | 2 | 472 | 9.53e-130 | 393 |
MS.gene44789.t1 | MTR_3g095010 | 29.392 | 592 | 367 | 14 | 144 | 715 | 96 | 656 | 1.74e-62 | 222 |
MS.gene44789.t1 | MTR_7g102070 | 28.814 | 236 | 127 | 8 | 482 | 691 | 420 | 640 | 1.43e-13 | 75.1 |
MS.gene44789.t1 | MTR_1g063170 | 30.332 | 211 | 112 | 7 | 482 | 666 | 393 | 594 | 1.62e-13 | 75.1 |
MS.gene44789.t1 | MTR_4g124050 | 29.237 | 236 | 105 | 9 | 493 | 691 | 1055 | 1265 | 1.87e-13 | 74.7 |
MS.gene44789.t1 | MTR_3g107800 | 29.046 | 241 | 109 | 9 | 488 | 691 | 1026 | 1241 | 6.93e-13 | 72.8 |
MS.gene44789.t1 | MTR_8g022270 | 27.232 | 224 | 134 | 7 | 488 | 691 | 598 | 812 | 1.54e-12 | 72.0 |
MS.gene44789.t1 | MTR_5g029750 | 27.632 | 228 | 128 | 9 | 488 | 691 | 989 | 1203 | 1.54e-12 | 71.6 |
MS.gene44789.t1 | MTR_6g011680 | 31.441 | 229 | 118 | 10 | 488 | 691 | 1008 | 1222 | 1.85e-12 | 71.6 |
MS.gene44789.t1 | MTR_3g093430 | 30.213 | 235 | 113 | 9 | 488 | 691 | 364 | 578 | 2.34e-11 | 67.8 |
MS.gene44789.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 2.93e-11 | 65.5 |
MS.gene44789.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 4.38e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44789.t1 | AT3G54540 | 78.817 | 727 | 138 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1144 |
MS.gene44789.t1 | AT3G54540 | 78.817 | 727 | 138 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1144 |
MS.gene44789.t1 | AT1G64550 | 39.611 | 669 | 343 | 14 | 52 | 702 | 83 | 708 | 2.59e-155 | 467 |
MS.gene44789.t1 | AT5G60790 | 41.622 | 555 | 289 | 7 | 152 | 705 | 67 | 587 | 7.86e-148 | 444 |
MS.gene44789.t1 | AT5G64840 | 29.649 | 570 | 358 | 11 | 145 | 701 | 89 | 628 | 5.02e-66 | 231 |
MS.gene44789.t1 | AT5G09930 | 30.648 | 571 | 353 | 14 | 144 | 701 | 74 | 614 | 4.10e-63 | 223 |
MS.gene44789.t1 | AT3G28390 | 31.718 | 227 | 112 | 10 | 493 | 691 | 985 | 1196 | 1.12e-13 | 75.5 |
MS.gene44789.t1 | AT3G28345 | 30.734 | 218 | 125 | 8 | 481 | 676 | 988 | 1201 | 3.28e-13 | 73.9 |
MS.gene44789.t1 | AT2G36910 | 30.097 | 206 | 109 | 7 | 487 | 666 | 367 | 563 | 4.51e-13 | 73.6 |
MS.gene44789.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.70e-12 | 70.1 |
MS.gene44789.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.70e-12 | 70.1 |
MS.gene44789.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 5.70e-12 | 70.1 |
MS.gene44789.t1 | AT1G67940 | 31.754 | 211 | 102 | 9 | 165 | 366 | 41 | 218 | 1.28e-11 | 66.2 |
MS.gene44789.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 1.99e-11 | 68.2 |
MS.gene44789.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 1.99e-11 | 68.2 |
MS.gene44789.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 1.99e-11 | 68.2 |
MS.gene44789.t1 | AT1G70610 | 31.792 | 173 | 104 | 4 | 488 | 646 | 455 | 627 | 2.02e-11 | 67.8 |
MS.gene44789.t1 | AT3G28860 | 31.222 | 221 | 121 | 9 | 492 | 691 | 1014 | 1224 | 2.04e-11 | 68.2 |
MS.gene44789.t1 | AT3G28860 | 27.803 | 223 | 126 | 7 | 492 | 691 | 369 | 579 | 3.89e-11 | 67.4 |
MS.gene44789.t1 | AT1G70610 | 30.337 | 178 | 100 | 5 | 488 | 646 | 274 | 446 | 2.23e-11 | 67.4 |
MS.gene44789.t1 | AT4G01830 | 28.444 | 225 | 132 | 8 | 488 | 691 | 751 | 967 | 2.36e-11 | 67.8 |
MS.gene44789.t1 | AT1G10680 | 26.754 | 228 | 130 | 9 | 488 | 691 | 982 | 1196 | 3.02e-11 | 67.8 |
MS.gene44789.t1 | AT4G25960 | 28.431 | 204 | 113 | 8 | 488 | 666 | 1030 | 1225 | 3.47e-11 | 67.4 |
MS.gene44789.t1 | AT1G65410 | 28.182 | 220 | 114 | 6 | 150 | 354 | 79 | 269 | 3.70e-11 | 65.9 |
MS.gene44789.t1 | AT3G28380 | 28.571 | 217 | 117 | 8 | 488 | 676 | 995 | 1201 | 4.41e-11 | 67.0 |
MS.gene44789.t1 | AT4G01830 | 28.444 | 225 | 132 | 8 | 488 | 691 | 985 | 1201 | 4.60e-11 | 67.0 |
MS.gene44789.t1 | AT4G18050 | 28.070 | 228 | 118 | 8 | 493 | 691 | 998 | 1208 | 5.75e-11 | 66.6 |
MS.gene44789.t1 | AT4G18050 | 28.070 | 228 | 118 | 8 | 493 | 691 | 1008 | 1218 | 5.81e-11 | 66.6 |
Find 165 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTGCAAAACTTGGTAAATA+TGG | 0.195660 | 7.4:+81778673 | MS.gene44789:CDS |
TGTTGATGTTGGTATTGATA+TGG | 0.277196 | 7.4:+81778420 | MS.gene44789:CDS |
AGGCAAAGAAAGAAGCTCTT+AGG | 0.283965 | 7.4:+81777249 | MS.gene44789:CDS |
ATGAAGAGCGGAGTCAAATA+TGG | 0.293559 | 7.4:+81778929 | MS.gene44789:CDS |
GAAGCTTTCGGAGCAGGTTT+TGG | 0.296468 | 7.4:-81777059 | None:intergenic |
AAAAGCTGATAAGCCTAAAA+AGG | 0.327285 | 7.4:+81777016 | MS.gene44789:CDS |
ACTTGTGTGGTACCTCTACT+TGG | 0.330518 | 7.4:-81778279 | None:intergenic |
AGCTGCCCATGTGGCTGAAC+AGG | 0.335346 | 7.4:+81777229 | MS.gene44789:CDS |
TAAGAATATTGATGTCCTTC+TGG | 0.338734 | 7.4:+81777520 | MS.gene44789:CDS |
GTCTAAAATCCTCTCGGTTT+GGG | 0.344431 | 7.4:-81778390 | None:intergenic |
CCTGGTTTAGCCTTTGTAGA+TGG | 0.353411 | 7.4:-81776930 | None:intergenic |
GGAAAACGGTATGGTTTGAT+TGG | 0.355040 | 7.4:+81777434 | MS.gene44789:CDS |
ATCTTGTTGAGCCTTGTTCC+CGG | 0.359673 | 7.4:-81778170 | None:intergenic |
GTTGCCATTGTTGGGCCTAA+TGG | 0.366354 | 7.4:+81778451 | MS.gene44789:CDS |
GTTGATGTTGGTATTGATAT+GGG | 0.367817 | 7.4:+81778421 | MS.gene44789:CDS |
CTCTGCCATGTTGGCAGGTA+TGG | 0.372673 | 7.4:+81776989 | MS.gene44789:CDS |
GAATCTTCTAGCTGGTGATT+TGG | 0.379502 | 7.4:+81778495 | MS.gene44789:CDS |
TTGTAATCCTCAAATGTTCC+AGG | 0.380069 | 7.4:-81778982 | None:intergenic |
TTGAAAGCAGCTAGAAGAAC+CGG | 0.393435 | 7.4:+81778151 | MS.gene44789:CDS |
GGGACTCGTGTTGCCATTGT+TGG | 0.395294 | 7.4:+81778442 | MS.gene44789:CDS |
TGCATATCCAAATGATTTGT+GGG | 0.395419 | 7.4:-81778811 | None:intergenic |
AGATGAACCCACAAATCATT+TGG | 0.396989 | 7.4:+81778804 | MS.gene44789:CDS |
GAGGGCTGTTCTGTGGTTAG+AGG | 0.402715 | 7.4:+81777931 | MS.gene44789:CDS |
CACTATTGAAGCTTCTTGCT+TGG | 0.403215 | 7.4:+81777480 | MS.gene44789:CDS |
CACCTCAAGTGGCTTCAAAT+CGG | 0.406400 | 7.4:-81777159 | None:intergenic |
GATCTACAAAATGCAGCTTC+TGG | 0.417738 | 7.4:+81777635 | MS.gene44789:CDS |
CTTCGAACTTCACCTTCACT+TGG | 0.420634 | 7.4:-81778520 | None:intergenic |
TTACTAAGCCCCTCCTGGTC+TGG | 0.421538 | 7.4:-81778637 | None:intergenic |
TCCGTCTCTGCCATGTTGGC+AGG | 0.421555 | 7.4:+81776984 | MS.gene44789:CDS |
TCTTTGCCTGTTCAGCCACA+TGG | 0.423166 | 7.4:-81777235 | None:intergenic |
ACCTCAAGTGGCTTCAAATC+GGG | 0.424766 | 7.4:-81777158 | None:intergenic |
AGTCTAAAATCCTCTCGGTT+TGG | 0.427353 | 7.4:-81778391 | None:intergenic |
GAGATATTCCCAACACTTTG+TGG | 0.436079 | 7.4:+81778564 | MS.gene44789:CDS |
GAAGTCAGAAGTTGAGGATA+GGG | 0.442070 | 7.4:+81778542 | MS.gene44789:CDS |
TTGCATATCCAAATGATTTG+TGG | 0.442799 | 7.4:-81778812 | None:intergenic |
AGCTAAGTTTGCAGCAGCTA+AGG | 0.445509 | 7.4:+81778207 | MS.gene44789:CDS |
CCTCCTGATAGTTTGACAAT+GGG | 0.445696 | 7.4:-81778721 | None:intergenic |
GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 7.4:-81778588 | None:intergenic |
TATGCAGAAGCTTTCGGAGC+AGG | 0.454924 | 7.4:-81777065 | None:intergenic |
CATTCTCCAGCCGCCACTAA+AGG | 0.455107 | 7.4:-81777831 | None:intergenic |
AGAAGGACATCAATATTCTT+AGG | 0.458676 | 7.4:-81777518 | None:intergenic |
CTTGCTTACTAAGCCCCTCC+TGG | 0.460120 | 7.4:-81778642 | None:intergenic |
TGATGTCCTTCTGGTTGAGC+AGG | 0.464580 | 7.4:+81777529 | MS.gene44789:CDS |
GGTGTAAGTTCAGTAGGTTC+AGG | 0.465377 | 7.4:-81778331 | None:intergenic |
AGTCGAGCTTCGGTGCTTGA+TGG | 0.465390 | 7.4:+81777305 | MS.gene44789:CDS |
AAATTTCCCTGGAACATTTG+AGG | 0.467370 | 7.4:+81778975 | MS.gene44789:CDS |
TTGATTGGGCCGAATGGAAT+GGG | 0.471197 | 7.4:+81777449 | MS.gene44789:CDS |
GTGCAAAACTTGGTAAATAT+GGG | 0.472556 | 7.4:+81778674 | MS.gene44789:CDS |
CAAAATCCTTTAGTGGCGGC+TGG | 0.473137 | 7.4:+81777825 | MS.gene44789:CDS |
GAAAACGGTATGGTTTGATT+GGG | 0.473363 | 7.4:+81777435 | MS.gene44789:CDS |
GTTGACTTGCCCATTCCATT+CGG | 0.473986 | 7.4:-81777458 | None:intergenic |
TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 7.4:-81778572 | None:intergenic |
TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 7.4:+81778734 | MS.gene44789:CDS |
CAAATATGGGTTGTTGAAGA+TGG | 0.482826 | 7.4:+81778943 | MS.gene44789:CDS |
GTTCAGTAGGTTCAGGAAAG+TGG | 0.490159 | 7.4:-81778324 | None:intergenic |
CCCTCCTGATAGTTTGACAA+TGG | 0.490991 | 7.4:-81778722 | None:intergenic |
ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 7.4:+81778735 | MS.gene44789:CDS |
TGATGCATTGGCTGATGCGC+TGG | 0.493126 | 7.4:+81778840 | MS.gene44789:CDS |
AGACTCTCGGATGTTGATGT+TGG | 0.493998 | 7.4:+81778409 | MS.gene44789:CDS |
CCTCAGGTCAAGATGATTAG+TGG | 0.497140 | 7.4:-81777912 | None:intergenic |
AAAAGCAAAAGCAAGGGAAA+GGG | 0.497237 | 7.4:+81778235 | MS.gene44789:CDS |
TAAAGATATCTCATGGAAAA+CGG | 0.497247 | 7.4:+81777420 | MS.gene44789:CDS |
TGTCATTGGAAGTCGAGCTT+CGG | 0.497818 | 7.4:+81777295 | MS.gene44789:CDS |
GGCAAAGAAAGAAGCTCTTA+GGG | 0.499292 | 7.4:+81777250 | MS.gene44789:CDS |
GGACTCGTGTTGCCATTGTT+GGG | 0.501610 | 7.4:+81778443 | MS.gene44789:CDS |
CTGGTTGAGCAGGAGGTAGT+TGG | 0.501745 | 7.4:+81777539 | MS.gene44789:CDS |
CGTCCTACAAAATCCTTTAG+TGG | 0.502520 | 7.4:+81777818 | MS.gene44789:CDS |
TTGAAACTTCATTTCTATCG+TGG | 0.502609 | 7.4:+81778049 | MS.gene44789:CDS |
TATTGAAGCTTCTTGCTTGG+AGG | 0.502846 | 7.4:+81777483 | MS.gene44789:CDS |
TTCGAAGAAGTCAGAAGTTG+AGG | 0.502896 | 7.4:+81778536 | MS.gene44789:CDS |
TAGCAAAGATGTTTCTAAGA+AGG | 0.504069 | 7.4:+81776953 | MS.gene44789:CDS |
AATGCAGCTTCTGGTGAAGA+AGG | 0.504187 | 7.4:+81777644 | MS.gene44789:CDS |
GAGGCTGTTCGTGCAAAACT+TGG | 0.509140 | 7.4:+81778664 | MS.gene44789:CDS |
AGAAGTCAGAAGTTGAGGAT+AGG | 0.509662 | 7.4:+81778541 | MS.gene44789:CDS |
CTTTGCCTGTTCAGCCACAT+GGG | 0.510208 | 7.4:-81777234 | None:intergenic |
TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 7.4:-81778573 | None:intergenic |
TCTTGCTTGGAGGAAGATAC+CGG | 0.512342 | 7.4:+81777493 | MS.gene44789:CDS |
TAGAGGAGTACTTGTGTCGT+TGG | 0.513249 | 7.4:+81777948 | MS.gene44789:CDS |
AGTGGAGGTGTAAGTTCAGT+AGG | 0.514390 | 7.4:-81778337 | None:intergenic |
TTTGATTGGGCCGAATGGAA+TGG | 0.517459 | 7.4:+81777448 | MS.gene44789:CDS |
GAAAAGCAAAAGCAAGGGAA+AGG | 0.518492 | 7.4:+81778234 | MS.gene44789:CDS |
TCAGTGTATGCAGAAGCTTT+CGG | 0.518649 | 7.4:-81777071 | None:intergenic |
TATGAACAATTACAACTGAT+GGG | 0.518809 | 7.4:+81777725 | MS.gene44789:CDS |
ACCTGCCAACATGGCAGAGA+CGG | 0.520257 | 7.4:-81776985 | None:intergenic |
GTATGAACAATTACAACTGA+TGG | 0.520659 | 7.4:+81777724 | MS.gene44789:CDS |
AAATGATACTAACGAGGAAG+AGG | 0.525034 | 7.4:+81777676 | MS.gene44789:CDS |
GATGCGCTGGATGAATTCAC+TGG | 0.525230 | 7.4:+81778853 | MS.gene44789:CDS |
TGTCCTTCTGGTTGAGCAGG+AGG | 0.526914 | 7.4:+81777532 | MS.gene44789:CDS |
TAAGCCCCTCCTGGTCTGGA+TGG | 0.527473 | 7.4:-81778633 | None:intergenic |
ATTGTTGGGCCTAATGGTGC+TGG | 0.529640 | 7.4:+81778457 | MS.gene44789:CDS |
AGACGAAGAAGGTACTGAAC+AGG | 0.533085 | 7.4:-81778610 | None:intergenic |
TTAGAAACATCTTTGCTACC+TGG | 0.537424 | 7.4:-81776948 | None:intergenic |
TGGAACATTTGAGGATTACA+AGG | 0.538781 | 7.4:+81778984 | MS.gene44789:CDS |
TATGCAAAGTATTGATGCAT+TGG | 0.543005 | 7.4:+81778828 | MS.gene44789:CDS |
ACTAACGAGGAAGAGGATGC+AGG | 0.546607 | 7.4:+81777683 | MS.gene44789:CDS |
ACTTCAGTAAAGATATCTCA+TGG | 0.548568 | 7.4:+81777413 | MS.gene44789:CDS |
GAACAAGGCTCAACAAGATA+AGG | 0.549422 | 7.4:+81778174 | MS.gene44789:CDS |
AGCTAGAAGAACCGGGAACA+AGG | 0.549535 | 7.4:+81778159 | MS.gene44789:CDS |
ATATCTCATGGAAAACGGTA+TGG | 0.553869 | 7.4:+81777425 | MS.gene44789:CDS |
TGAAGAGCGGAGTCAAATAT+GGG | 0.555745 | 7.4:+81778930 | MS.gene44789:CDS |
GGCACTGTCAGAAATTTCCC+TGG | 0.559821 | 7.4:+81778964 | MS.gene44789:CDS |
CGTCTCCATCCAGACCAGGA+GGG | 0.561023 | 7.4:+81778628 | MS.gene44789:CDS |
TGAGTCTGAAGAGGAGCTAG+AGG | 0.562887 | 7.4:+81777124 | MS.gene44789:CDS |
GTCTCCATCCAGACCAGGAG+GGG | 0.564083 | 7.4:+81778629 | MS.gene44789:CDS |
CACTAATCATCTTGACCTGA+GGG | 0.565689 | 7.4:+81777913 | MS.gene44789:CDS |
TTCATCCATACCTGCCAACA+TGG | 0.566109 | 7.4:-81776994 | None:intergenic |
CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 7.4:+81778579 | MS.gene44789:CDS |
TCTTCGTCTCCATCCAGACC+AGG | 0.570272 | 7.4:+81778624 | MS.gene44789:CDS |
ACTTCAATAAGCTGCAGAAG+TGG | 0.570862 | 7.4:-81778355 | None:intergenic |
GGAATCGAAAAGCAAAAGCA+AGG | 0.571756 | 7.4:+81778228 | MS.gene44789:CDS |
TATGGTTTGATTGGGCCGAA+TGG | 0.572136 | 7.4:+81777443 | MS.gene44789:CDS |
TTGACCTGAGGGCTGTTCTG+TGG | 0.577822 | 7.4:+81777924 | MS.gene44789:CDS |
ACATCAATATTCTTAGGCAC+CGG | 0.584768 | 7.4:-81777512 | None:intergenic |
ACACTGCTGAATCTTCTAGC+TGG | 0.589769 | 7.4:+81778487 | MS.gene44789:CDS |
TTCAGACTCATCATCATCAG+AGG | 0.591473 | 7.4:-81777111 | None:intergenic |
TGATGATGATGAGTCTGAAG+AGG | 0.592511 | 7.4:+81777115 | MS.gene44789:CDS |
TAGAGGTACCACACAAGTGG+AGG | 0.593380 | 7.4:+81778284 | MS.gene44789:CDS |
GCCCGATTTGAAGCCACTTG+AGG | 0.595553 | 7.4:+81777157 | MS.gene44789:CDS |
GAATCGAAAAGCAAAAGCAA+GGG | 0.597247 | 7.4:+81778229 | MS.gene44789:CDS |
CTTGTGTGGTACCTCTACTT+GGG | 0.597963 | 7.4:-81778278 | None:intergenic |
CTCAGGTCAAGATGATTAGT+GGG | 0.599587 | 7.4:-81777911 | None:intergenic |
GGGAAAGGGAAAGGTTGATG+AGG | 0.600456 | 7.4:+81778249 | MS.gene44789:CDS |
CCGAGAGTCTAAAATCCTCT+CGG | 0.603865 | 7.4:-81778396 | None:intergenic |
CTAACCACAGAACAGCCCTC+AGG | 0.604974 | 7.4:-81777928 | None:intergenic |
CTGTAGTCCCTCCACTTGTG+TGG | 0.605482 | 7.4:-81778292 | None:intergenic |
TTGATGTTGGTATTGATATG+GGG | 0.606166 | 7.4:+81778422 | MS.gene44789:CDS |
AAGTAGAGGTACCACACAAG+TGG | 0.606298 | 7.4:+81778281 | MS.gene44789:CDS |
CAAAAGCAAGGGAAAGGGAA+AGG | 0.608390 | 7.4:+81778240 | MS.gene44789:CDS |
GGGGTAAGATGATTATGACT+TGG | 0.608520 | 7.4:-81778700 | None:intergenic |
TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 7.4:-81777887 | None:intergenic |
TCAATAAGCTGCAGAAGTGG+AGG | 0.610264 | 7.4:-81778352 | None:intergenic |
GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 7.4:+81778508 | MS.gene44789:CDS |
TCAGACTCATCATCATCAGA+GGG | 0.613503 | 7.4:-81777110 | None:intergenic |
TGTAATCCTCAAATGTTCCA+GGG | 0.613886 | 7.4:-81778981 | None:intergenic |
TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 7.4:-81777888 | None:intergenic |
GGAGGGGCTTAGTAAGCAAG+AGG | 0.616783 | 7.4:+81778645 | MS.gene44789:CDS |
CCCATTGTCAAACTATCAGG+AGG | 0.619312 | 7.4:+81778721 | MS.gene44789:CDS |
AGGAGCTAGAGGAAAAGCAT+AGG | 0.621065 | 7.4:+81777135 | MS.gene44789:CDS |
TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 7.4:-81777170 | None:intergenic |
TCGGTGCTTGATGGAGATGA+TGG | 0.624032 | 7.4:+81777314 | MS.gene44789:CDS |
TCATCTAACAATAAAATGTG+AGG | 0.624906 | 7.4:-81778787 | None:intergenic |
CTCCTGATAGTTTGACAATG+GGG | 0.626825 | 7.4:-81778720 | None:intergenic |
CCACTAATCATCTTGACCTG+AGG | 0.627165 | 7.4:+81777912 | MS.gene44789:CDS |
CCATCTACAAAGGCTAAACC+AGG | 0.627415 | 7.4:+81776930 | MS.gene44789:CDS |
CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 7.4:-81777535 | None:intergenic |
TGAAAGCAGCTAGAAGAACC+GGG | 0.637063 | 7.4:+81778152 | MS.gene44789:CDS |
AGCACCATTAGGCCCAACAA+TGG | 0.640352 | 7.4:-81778455 | None:intergenic |
GGTCTGGATGGAGACGAAGA+AGG | 0.643717 | 7.4:-81778621 | None:intergenic |
GGCTCAACAAGATAAGGTGA+AGG | 0.644665 | 7.4:+81778180 | MS.gene44789:CDS |
TCGTCTCCATCCAGACCAGG+AGG | 0.645629 | 7.4:+81778627 | MS.gene44789:CDS |
TAAAATGTGAGGTCTTGACA+TGG | 0.645742 | 7.4:-81778776 | None:intergenic |
TCCTGATAGTTTGACAATGG+GGG | 0.650226 | 7.4:-81778719 | None:intergenic |
TGAGGATGAGACCCAAGTAG+AGG | 0.652669 | 7.4:+81778267 | MS.gene44789:CDS |
AGAGGTACCACACAAGTGGA+GGG | 0.653345 | 7.4:+81778285 | MS.gene44789:CDS |
GACTCATCATCATCAGAGGG+AGG | 0.655723 | 7.4:-81777107 | None:intergenic |
AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 7.4:+81778738 | MS.gene44789:CDS |
CCTACAAAATCCTTTAGTGG+CGG | 0.660892 | 7.4:+81777821 | MS.gene44789:CDS |
ATGAACAATTACAACTGATG+GGG | 0.661536 | 7.4:+81777726 | MS.gene44789:CDS |
AGCTTCTGGTGAAGAAGGTG+TGG | 0.667605 | 7.4:+81777649 | MS.gene44789:CDS |
GCGCTGGATGAATTCACTGG+TGG | 0.669802 | 7.4:+81778856 | MS.gene44789:CDS |
GGATGCAGGACCATCTACAA+AGG | 0.679069 | 7.4:+81776920 | MS.gene44789:CDS |
CCATTGTCAAACTATCAGGA+GGG | 0.684004 | 7.4:+81778722 | MS.gene44789:CDS |
CAAGTGGAGGGACTACAGCG+TGG | 0.701926 | 7.4:+81778297 | MS.gene44789:CDS |
CTTCAGTTACCCAAACCGAG+AGG | 0.710739 | 7.4:+81778381 | MS.gene44789:CDS |
GTGTCTGTGATGATGAAGAG+CGG | 0.766470 | 7.4:+81778917 | MS.gene44789:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TAAAGATATCTCATGGAAAA+CGG | + | chr7.4:81777420-81777439 | MS.gene44789:CDS | 25.0% |
! | TATGAACAATTACAACTGAT+GGG | + | chr7.4:81777725-81777744 | MS.gene44789:CDS | 25.0% |
! | TCATCTAACAATAAAATGTG+AGG | - | chr7.4:81778790-81778809 | None:intergenic | 25.0% |
AAAAGCTGATAAGCCTAAAA+AGG | + | chr7.4:81777016-81777035 | MS.gene44789:CDS | 30.0% | |
ACTTCAGTAAAGATATCTCA+TGG | + | chr7.4:81777413-81777432 | MS.gene44789:CDS | 30.0% | |
AGAAGGACATCAATATTCTT+AGG | - | chr7.4:81777521-81777540 | None:intergenic | 30.0% | |
ATGAACAATTACAACTGATG+GGG | + | chr7.4:81777726-81777745 | MS.gene44789:CDS | 30.0% | |
GGATAAAAATGATACTAACG+AGG | + | chr7.4:81777670-81777689 | MS.gene44789:CDS | 30.0% | |
GTATGAACAATTACAACTGA+TGG | + | chr7.4:81777724-81777743 | MS.gene44789:CDS | 30.0% | |
GTGCAAAACTTGGTAAATAT+GGG | + | chr7.4:81778674-81778693 | MS.gene44789:CDS | 30.0% | |
TAAGAATATTGATGTCCTTC+TGG | + | chr7.4:81777520-81777539 | MS.gene44789:CDS | 30.0% | |
TTGAAACTTCATTTCTATCG+TGG | + | chr7.4:81778049-81778068 | MS.gene44789:CDS | 30.0% | |
TTGCATATCCAAATGATTTG+TGG | - | chr7.4:81778815-81778834 | None:intergenic | 30.0% | |
! | AAAATTTTTCTGTGTCTGCA+CGG | + | chr7.4:81777369-81777388 | MS.gene44789:CDS | 30.0% |
! | TAGCAAAGATGTTTCTAAGA+AGG | + | chr7.4:81776953-81776972 | MS.gene44789:CDS | 30.0% |
! | TGCATATCCAAATGATTTGT+GGG | - | chr7.4:81778814-81778833 | None:intergenic | 30.0% |
! | TTATTCGAAGATGCCTTTTT+AGG | - | chr7.4:81777032-81777051 | None:intergenic | 30.0% |
!! | AATTTTGATGCTTTTGAGAG+TGG | + | chr7.4:81778073-81778092 | MS.gene44789:CDS | 30.0% |
!! | ATTTTGATGCTTTTGAGAGT+GGG | + | chr7.4:81778074-81778093 | MS.gene44789:CDS | 30.0% |
!! | GTTGATGTTGGTATTGATAT+GGG | + | chr7.4:81778421-81778440 | MS.gene44789:CDS | 30.0% |
!! | TAAAAAGGCATCTTCGAATA+AGG | + | chr7.4:81777031-81777050 | MS.gene44789:CDS | 30.0% |
!! | TATGCAAAGTATTGATGCAT+TGG | + | chr7.4:81778828-81778847 | MS.gene44789:CDS | 30.0% |
!! | TGTTGATGTTGGTATTGATA+TGG | + | chr7.4:81778420-81778439 | MS.gene44789:CDS | 30.0% |
!! | TTGATGTTGGTATTGATATG+GGG | + | chr7.4:81778422-81778441 | MS.gene44789:CDS | 30.0% |
AAAAGCAAAAGCAAGGGAAA+GGG | + | chr7.4:81778235-81778254 | MS.gene44789:CDS | 35.0% | |
AAATGATACTAACGAGGAAG+AGG | + | chr7.4:81777676-81777695 | MS.gene44789:CDS | 35.0% | |
AAATTTCCCTGGAACATTTG+AGG | + | chr7.4:81778975-81778994 | MS.gene44789:CDS | 35.0% | |
ACATCAATATTCTTAGGCAC+CGG | - | chr7.4:81777515-81777534 | None:intergenic | 35.0% | |
AGATGAACCCACAAATCATT+TGG | + | chr7.4:81778804-81778823 | MS.gene44789:CDS | 35.0% | |
ATATCTCATGGAAAACGGTA+TGG | + | chr7.4:81777425-81777444 | MS.gene44789:CDS | 35.0% | |
CGTGCAAAACTTGGTAAATA+TGG | + | chr7.4:81778673-81778692 | MS.gene44789:CDS | 35.0% | |
GAAAACGGTATGGTTTGATT+GGG | + | chr7.4:81777435-81777454 | MS.gene44789:CDS | 35.0% | |
GAATCGAAAAGCAAAAGCAA+GGG | + | chr7.4:81778229-81778248 | MS.gene44789:CDS | 35.0% | |
GTGTTTCATCCATTGTTAGT+AGG | - | chr7.4:81778591-81778610 | None:intergenic | 35.0% | |
TAAAATGTGAGGTCTTGACA+TGG | - | chr7.4:81778779-81778798 | None:intergenic | 35.0% | |
TCATCGAGCAATAATAGAGT+GGG | - | chr7.4:81777890-81777909 | None:intergenic | 35.0% | |
TCGTTGGAAAAAAACTTTGG+TGG | + | chr7.4:81777964-81777983 | MS.gene44789:CDS | 35.0% | |
TGGAACATTTGAGGATTACA+AGG | + | chr7.4:81778984-81779003 | MS.gene44789:CDS | 35.0% | |
TGTAATCCTCAAATGTTCCA+GGG | - | chr7.4:81778984-81779003 | None:intergenic | 35.0% | |
TTAGAAACATCTTTGCTACC+TGG | - | chr7.4:81776951-81776970 | None:intergenic | 35.0% | |
TTCATCGAGCAATAATAGAG+TGG | - | chr7.4:81777891-81777910 | None:intergenic | 35.0% | |
TTGTAATCCTCAAATGTTCC+AGG | - | chr7.4:81778985-81779004 | None:intergenic | 35.0% | |
! | AAATTTTTCTGTGTCTGCAC+GGG | + | chr7.4:81777370-81777389 | MS.gene44789:CDS | 35.0% |
! | CAAATATGGGTTGTTGAAGA+TGG | + | chr7.4:81778943-81778962 | MS.gene44789:CDS | 35.0% |
! | CACTAAAGGATTTTGTAGGA+CGG | - | chr7.4:81777820-81777839 | None:intergenic | 35.0% |
! | GATGCTTTTACTGTTGTCAT+TGG | + | chr7.4:81777281-81777300 | MS.gene44789:CDS | 35.0% |
! | GTGTCGTTGGAAAAAAACTT+TGG | + | chr7.4:81777961-81777980 | MS.gene44789:CDS | 35.0% |
!!! | TCAAAGATTTTAGCTGGTCT+GGG | + | chr7.4:81777773-81777792 | MS.gene44789:CDS | 35.0% |
AAGAAAAAGTCAGAGGATGC+AGG | + | chr7.4:81776906-81776925 | MS.gene44789:CDS | 40.0% | |
ACTTCAATAAGCTGCAGAAG+TGG | - | chr7.4:81778358-81778377 | None:intergenic | 40.0% | |
AGAAGTCAGAAGTTGAGGAT+AGG | + | chr7.4:81778541-81778560 | MS.gene44789:CDS | 40.0% | |
AGGCAAAGAAAGAAGCTCTT+AGG | + | chr7.4:81777249-81777268 | MS.gene44789:CDS | 40.0% | |
ATGAAGAGCGGAGTCAAATA+TGG | + | chr7.4:81778929-81778948 | MS.gene44789:CDS | 40.0% | |
CACTAATCATCTTGACCTGA+GGG | + | chr7.4:81777913-81777932 | MS.gene44789:CDS | 40.0% | |
CACTATTGAAGCTTCTTGCT+TGG | + | chr7.4:81777480-81777499 | MS.gene44789:CDS | 40.0% | |
CCATTGTCAAACTATCAGGA+GGG | + | chr7.4:81778722-81778741 | MS.gene44789:CDS | 40.0% | |
CCTACAAAATCCTTTAGTGG+CGG | + | chr7.4:81777821-81777840 | MS.gene44789:CDS | 40.0% | |
CCTCCTGATAGTTTGACAAT+GGG | - | chr7.4:81778724-81778743 | None:intergenic | 40.0% | |
CGTCCTACAAAATCCTTTAG+TGG | + | chr7.4:81777818-81777837 | MS.gene44789:CDS | 40.0% | |
CTCAGGTCAAGATGATTAGT+GGG | - | chr7.4:81777914-81777933 | None:intergenic | 40.0% | |
CTCCTGATAGTTTGACAATG+GGG | - | chr7.4:81778723-81778742 | None:intergenic | 40.0% | |
CTTTGTGGACCTACTAACAA+TGG | + | chr7.4:81778579-81778598 | MS.gene44789:CDS | 40.0% | |
GAAAAGCAAAAGCAAGGGAA+AGG | + | chr7.4:81778234-81778253 | MS.gene44789:CDS | 40.0% | |
GAACAAGGCTCAACAAGATA+AGG | + | chr7.4:81778174-81778193 | MS.gene44789:CDS | 40.0% | |
GAAGTCAGAAGTTGAGGATA+GGG | + | chr7.4:81778542-81778561 | MS.gene44789:CDS | 40.0% | |
GAGATATTCCCAACACTTTG+TGG | + | chr7.4:81778564-81778583 | MS.gene44789:CDS | 40.0% | |
GATCTACAAAATGCAGCTTC+TGG | + | chr7.4:81777635-81777654 | MS.gene44789:CDS | 40.0% | |
GGAAAACGGTATGGTTTGAT+TGG | + | chr7.4:81777434-81777453 | MS.gene44789:CDS | 40.0% | |
GGAATCGAAAAGCAAAAGCA+AGG | + | chr7.4:81778228-81778247 | MS.gene44789:CDS | 40.0% | |
GGCAAAGAAAGAAGCTCTTA+GGG | + | chr7.4:81777250-81777269 | MS.gene44789:CDS | 40.0% | |
GGGGTAAGATGATTATGACT+TGG | - | chr7.4:81778703-81778722 | None:intergenic | 40.0% | |
TATTGAAGCTTCTTGCTTGG+AGG | + | chr7.4:81777483-81777502 | MS.gene44789:CDS | 40.0% | |
TCAGACTCATCATCATCAGA+GGG | - | chr7.4:81777113-81777132 | None:intergenic | 40.0% | |
TCAGTGTATGCAGAAGCTTT+CGG | - | chr7.4:81777074-81777093 | None:intergenic | 40.0% | |
TCCTGATAGTTTGACAATGG+GGG | - | chr7.4:81778722-81778741 | None:intergenic | 40.0% | |
TGAAGAGCGGAGTCAAATAT+GGG | + | chr7.4:81778930-81778949 | MS.gene44789:CDS | 40.0% | |
TTAGTAGGTCCACAAAGTGT+TGG | - | chr7.4:81778576-81778595 | None:intergenic | 40.0% | |
TTCAGACTCATCATCATCAG+AGG | - | chr7.4:81777114-81777133 | None:intergenic | 40.0% | |
TTCGAAGAAGTCAGAAGTTG+AGG | + | chr7.4:81778536-81778555 | MS.gene44789:CDS | 40.0% | |
TTGAAAGCAGCTAGAAGAAC+CGG | + | chr7.4:81778151-81778170 | MS.gene44789:CDS | 40.0% | |
! | AATTTTTCTGTGTCTGCACG+GGG | + | chr7.4:81777371-81777390 | MS.gene44789:CDS | 40.0% |
! | AGTCTAAAATCCTCTCGGTT+TGG | - | chr7.4:81778394-81778413 | None:intergenic | 40.0% |
! | GAATCTTCTAGCTGGTGATT+TGG | + | chr7.4:81778495-81778514 | MS.gene44789:CDS | 40.0% |
! | GGTTTTACAAAGGACATGCA+GGG | + | chr7.4:81777794-81777813 | MS.gene44789:CDS | 40.0% |
! | GTAGATTTTCCAGCACCATT+AGG | - | chr7.4:81778469-81778488 | None:intergenic | 40.0% |
! | GTCTAAAATCCTCTCGGTTT+GGG | - | chr7.4:81778393-81778412 | None:intergenic | 40.0% |
! | TAGTAGGTCCACAAAGTGTT+GGG | - | chr7.4:81778575-81778594 | None:intergenic | 40.0% |
! | TGATGATGATGAGTCTGAAG+AGG | + | chr7.4:81777115-81777134 | MS.gene44789:CDS | 40.0% |
!! | CAAGCGTCAAAGATTTTAGC+TGG | + | chr7.4:81777767-81777786 | MS.gene44789:CDS | 40.0% |
!!! | AGATATTTTAGCTGCCCATG+TGG | + | chr7.4:81777220-81777239 | MS.gene44789:CDS | 40.0% |
!!! | GTCAAAGATTTTAGCTGGTC+TGG | + | chr7.4:81777772-81777791 | MS.gene44789:CDS | 40.0% |
AATGCAGCTTCTGGTGAAGA+AGG | + | chr7.4:81777644-81777663 | MS.gene44789:CDS | 45.0% | |
ACACTGCTGAATCTTCTAGC+TGG | + | chr7.4:81778487-81778506 | MS.gene44789:CDS | 45.0% | |
ACCCCCATTGTCAAACTATC+AGG | + | chr7.4:81778718-81778737 | MS.gene44789:CDS | 45.0% | |
ACCTCAAGTGGCTTCAAATC+GGG | - | chr7.4:81777161-81777180 | None:intergenic | 45.0% | |
ACTTGTGTGGTACCTCTACT+TGG | - | chr7.4:81778282-81778301 | None:intergenic | 45.0% | |
AGACTCTCGGATGTTGATGT+TGG | + | chr7.4:81778409-81778428 | MS.gene44789:CDS | 45.0% | |
AGCTAAGTTTGCAGCAGCTA+AGG | + | chr7.4:81778207-81778226 | MS.gene44789:CDS | 45.0% | |
CAAAAGCAAGGGAAAGGGAA+AGG | + | chr7.4:81778240-81778259 | MS.gene44789:CDS | 45.0% | |
CACCTCAAGTGGCTTCAAAT+CGG | - | chr7.4:81777162-81777181 | None:intergenic | 45.0% | |
CCACTAATCATCTTGACCTG+AGG | + | chr7.4:81777912-81777931 | MS.gene44789:CDS | 45.0% | |
CCATCTACAAAGGCTAAACC+AGG | + | chr7.4:81776930-81776949 | MS.gene44789:CDS | 45.0% | |
CCCATTGTCAAACTATCAGG+AGG | + | chr7.4:81778721-81778740 | MS.gene44789:CDS | 45.0% | |
CCCTCCTGATAGTTTGACAA+TGG | - | chr7.4:81778725-81778744 | None:intergenic | 45.0% | |
CCTCAGGTCAAGATGATTAG+TGG | - | chr7.4:81777915-81777934 | None:intergenic | 45.0% | |
CTTCGAACTTCACCTTCACT+TGG | - | chr7.4:81778523-81778542 | None:intergenic | 45.0% | |
CTTGTGTGGTACCTCTACTT+GGG | - | chr7.4:81778281-81778300 | None:intergenic | 45.0% | |
GGCTCAACAAGATAAGGTGA+AGG | + | chr7.4:81778180-81778199 | MS.gene44789:CDS | 45.0% | |
GGTGTAAGTTCAGTAGGTTC+AGG | - | chr7.4:81778334-81778353 | None:intergenic | 45.0% | |
GTTCAGTAGGTTCAGGAAAG+TGG | - | chr7.4:81778327-81778346 | None:intergenic | 45.0% | |
TATGGTTTGATTGGGCCGAA+TGG | + | chr7.4:81777443-81777462 | MS.gene44789:CDS | 45.0% | |
TCAATAAGCTGCAGAAGTGG+AGG | - | chr7.4:81778355-81778374 | None:intergenic | 45.0% | |
TCAGCAATAGACACCTCAAG+TGG | - | chr7.4:81777173-81777192 | None:intergenic | 45.0% | |
TCTTGCTTGGAGGAAGATAC+CGG | + | chr7.4:81777493-81777512 | MS.gene44789:CDS | 45.0% | |
TGAAAGCAGCTAGAAGAACC+GGG | + | chr7.4:81778152-81778171 | MS.gene44789:CDS | 45.0% | |
TGTCATTGGAAGTCGAGCTT+CGG | + | chr7.4:81777295-81777314 | MS.gene44789:CDS | 45.0% | |
TTCATCCATACCTGCCAACA+TGG | - | chr7.4:81776997-81777016 | None:intergenic | 45.0% | |
TTGATTGGGCCGAATGGAAT+GGG | + | chr7.4:81777449-81777468 | MS.gene44789:CDS | 45.0% | |
TTTGATTGGGCCGAATGGAA+TGG | + | chr7.4:81777448-81777467 | MS.gene44789:CDS | 45.0% | |
! | AGGAGCTAGAGGAAAAGCAT+AGG | + | chr7.4:81777135-81777154 | MS.gene44789:CDS | 45.0% |
! | AGTGGAGGTGTAAGTTCAGT+AGG | - | chr7.4:81778340-81778359 | None:intergenic | 45.0% |
! | ATTTTCCGTCTCTGCCATGT+TGG | + | chr7.4:81776980-81776999 | MS.gene44789:CDS | 45.0% |
! | CCGAGAGGATTTTAGACTCT+CGG | + | chr7.4:81778396-81778415 | MS.gene44789:CDS | 45.0% |
! | CCGAGAGTCTAAAATCCTCT+CGG | - | chr7.4:81778399-81778418 | None:intergenic | 45.0% |
! | CCGCCACTAAAGGATTTTGT+AGG | - | chr7.4:81777824-81777843 | None:intergenic | 45.0% |
! | CCTGGTTTAGCCTTTGTAGA+TGG | - | chr7.4:81776933-81776952 | None:intergenic | 45.0% |
! | GGGTTTTACAAAGGACATGC+AGG | + | chr7.4:81777793-81777812 | MS.gene44789:CDS | 45.0% |
! | GTGTCTGTGATGATGAAGAG+CGG | + | chr7.4:81778917-81778936 | MS.gene44789:CDS | 45.0% |
!! | AAGTAGAGGTACCACACAAG+TGG | + | chr7.4:81778281-81778300 | MS.gene44789:CDS | 45.0% |
!! | AGACGAAGAAGGTACTGAAC+AGG | - | chr7.4:81778613-81778632 | None:intergenic | 45.0% |
!! | AGCTGGTCTGGGTTTTACAA+AGG | + | chr7.4:81777784-81777803 | MS.gene44789:CDS | 45.0% |
!! | ATCTTGTTGAGCCTTGTTCC+CGG | - | chr7.4:81778173-81778192 | None:intergenic | 45.0% |
!! | GGTGATTTGGTTCCAAGTGA+AGG | + | chr7.4:81778508-81778527 | MS.gene44789:CDS | 45.0% |
!! | GTTGACTTGCCCATTCCATT+CGG | - | chr7.4:81777461-81777480 | None:intergenic | 45.0% |
!! | TAGAGGAGTACTTGTGTCGT+TGG | + | chr7.4:81777948-81777967 | MS.gene44789:CDS | 45.0% |
ACTAACGAGGAAGAGGATGC+AGG | + | chr7.4:81777683-81777702 | MS.gene44789:CDS | 50.0% | |
AGCACCATTAGGCCCAACAA+TGG | - | chr7.4:81778458-81778477 | None:intergenic | 50.0% | |
AGCTAGAAGAACCGGGAACA+AGG | + | chr7.4:81778159-81778178 | MS.gene44789:CDS | 50.0% | |
AGCTTCTGGTGAAGAAGGTG+TGG | + | chr7.4:81777649-81777668 | MS.gene44789:CDS | 50.0% | |
ATTGTTGGGCCTAATGGTGC+TGG | + | chr7.4:81778457-81778476 | MS.gene44789:CDS | 50.0% | |
CAAAATCCTTTAGTGGCGGC+TGG | + | chr7.4:81777825-81777844 | MS.gene44789:CDS | 50.0% | |
CTTCAGTTACCCAAACCGAG+AGG | + | chr7.4:81778381-81778400 | MS.gene44789:CDS | 50.0% | |
CTTTGCCTGTTCAGCCACAT+GGG | - | chr7.4:81777237-81777256 | None:intergenic | 50.0% | |
GACTCATCATCATCAGAGGG+AGG | - | chr7.4:81777110-81777129 | None:intergenic | 50.0% | |
GAGGCTGTTCGTGCAAAACT+TGG | + | chr7.4:81778664-81778683 | MS.gene44789:CDS | 50.0% | |
GATGCGCTGGATGAATTCAC+TGG | + | chr7.4:81778853-81778872 | MS.gene44789:CDS | 50.0% | |
GGACTCGTGTTGCCATTGTT+GGG | + | chr7.4:81778443-81778462 | MS.gene44789:CDS | 50.0% | |
GGATGCAGGACCATCTACAA+AGG | + | chr7.4:81776920-81776939 | MS.gene44789:CDS | 50.0% | |
GGCACTGTCAGAAATTTCCC+TGG | + | chr7.4:81778964-81778983 | MS.gene44789:CDS | 50.0% | |
GTTGCCATTGTTGGGCCTAA+TGG | + | chr7.4:81778451-81778470 | MS.gene44789:CDS | 50.0% | |
TATCAGGAGGGCAGAAAGCT+CGG | + | chr7.4:81778734-81778753 | MS.gene44789:CDS | 50.0% | |
TATGCAGAAGCTTTCGGAGC+AGG | - | chr7.4:81777068-81777087 | None:intergenic | 50.0% | |
TCTTTGCCTGTTCAGCCACA+TGG | - | chr7.4:81777238-81777257 | None:intergenic | 50.0% | |
TGAGGATGAGACCCAAGTAG+AGG | + | chr7.4:81778267-81778286 | MS.gene44789:CDS | 50.0% | |
TGAGTCTGAAGAGGAGCTAG+AGG | + | chr7.4:81777124-81777143 | MS.gene44789:CDS | 50.0% | |
! | GAAGCTTTCGGAGCAGGTTT+TGG | - | chr7.4:81777062-81777081 | None:intergenic | 50.0% |
! | TCGGTGCTTGATGGAGATGA+TGG | + | chr7.4:81777314-81777333 | MS.gene44789:CDS | 50.0% |
! | TGATGTCCTTCTGGTTGAGC+AGG | + | chr7.4:81777529-81777548 | MS.gene44789:CDS | 50.0% |
!! | AGAGGTACCACACAAGTGGA+GGG | + | chr7.4:81778285-81778304 | MS.gene44789:CDS | 50.0% |
!! | GGGAAAGGGAAAGGTTGATG+AGG | + | chr7.4:81778249-81778268 | MS.gene44789:CDS | 50.0% |
!! | TAGAGGTACCACACAAGTGG+AGG | + | chr7.4:81778284-81778303 | MS.gene44789:CDS | 50.0% |
ACCTGCCAACATGGCAGAGA+CGG | - | chr7.4:81776988-81777007 | None:intergenic | 55.0% | |
ATCAGGAGGGCAGAAAGCTC+GGG | + | chr7.4:81778735-81778754 | MS.gene44789:CDS | 55.0% | |
CATTCTCCAGCCGCCACTAA+AGG | - | chr7.4:81777834-81777853 | None:intergenic | 55.0% | |
CTAACCACAGAACAGCCCTC+AGG | - | chr7.4:81777931-81777950 | None:intergenic | 55.0% | |
CTACCTCCTGCTCAACCAGA+AGG | - | chr7.4:81777538-81777557 | None:intergenic | 55.0% | |
CTCTGCCATGTTGGCAGGTA+TGG | + | chr7.4:81776989-81777008 | MS.gene44789:CDS | 55.0% | |
CTGGTTGAGCAGGAGGTAGT+TGG | + | chr7.4:81777539-81777558 | MS.gene44789:CDS | 55.0% | |
CTGTAGTCCCTCCACTTGTG+TGG | - | chr7.4:81778295-81778314 | None:intergenic | 55.0% | |
CTTGCTTACTAAGCCCCTCC+TGG | - | chr7.4:81778645-81778664 | None:intergenic | 55.0% | |
GAGGGCTGTTCTGTGGTTAG+AGG | + | chr7.4:81777931-81777950 | MS.gene44789:CDS | 55.0% | |
GCGCTGGATGAATTCACTGG+TGG | + | chr7.4:81778856-81778875 | MS.gene44789:CDS | 55.0% | |
GGAGGGGCTTAGTAAGCAAG+AGG | + | chr7.4:81778645-81778664 | MS.gene44789:CDS | 55.0% | |
GGGACTCGTGTTGCCATTGT+TGG | + | chr7.4:81778442-81778461 | MS.gene44789:CDS | 55.0% | |
GGTCTGGATGGAGACGAAGA+AGG | - | chr7.4:81778624-81778643 | None:intergenic | 55.0% | |
TCTTCGTCTCCATCCAGACC+AGG | + | chr7.4:81778624-81778643 | MS.gene44789:CDS | 55.0% | |
TTACTAAGCCCCTCCTGGTC+TGG | - | chr7.4:81778640-81778659 | None:intergenic | 55.0% | |
TTGACCTGAGGGCTGTTCTG+TGG | + | chr7.4:81777924-81777943 | MS.gene44789:CDS | 55.0% | |
! | GCCCGATTTGAAGCCACTTG+AGG | + | chr7.4:81777157-81777176 | MS.gene44789:CDS | 55.0% |
! | TGTCCTTCTGGTTGAGCAGG+AGG | + | chr7.4:81777532-81777551 | MS.gene44789:CDS | 55.0% |
!! | AGTCGAGCTTCGGTGCTTGA+TGG | + | chr7.4:81777305-81777324 | MS.gene44789:CDS | 55.0% |
!! | TGATGCATTGGCTGATGCGC+TGG | + | chr7.4:81778840-81778859 | MS.gene44789:CDS | 55.0% |
AGCTGCCCATGTGGCTGAAC+AGG | + | chr7.4:81777229-81777248 | MS.gene44789:CDS | 60.0% | |
CAAGTGGAGGGACTACAGCG+TGG | + | chr7.4:81778297-81778316 | MS.gene44789:CDS | 60.0% | |
CGTCTCCATCCAGACCAGGA+GGG | + | chr7.4:81778628-81778647 | MS.gene44789:CDS | 60.0% | |
GTCTCCATCCAGACCAGGAG+GGG | + | chr7.4:81778629-81778648 | MS.gene44789:CDS | 60.0% | |
TAAGCCCCTCCTGGTCTGGA+TGG | - | chr7.4:81778636-81778655 | None:intergenic | 60.0% | |
TCCGTCTCTGCCATGTTGGC+AGG | + | chr7.4:81776984-81777003 | MS.gene44789:CDS | 60.0% | |
TCGTCTCCATCCAGACCAGG+AGG | + | chr7.4:81778627-81778646 | MS.gene44789:CDS | 60.0% | |
AGGAGGGCAGAAAGCTCGGG+TGG | + | chr7.4:81778738-81778757 | MS.gene44789:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 81776900 | 81779047 | 81776900 | ID=MS.gene44789 |
chr7.4 | mRNA | 81776900 | 81779047 | 81776900 | ID=MS.gene44789.t1;Parent=MS.gene44789 |
chr7.4 | exon | 81776900 | 81779047 | 81776900 | ID=MS.gene44789.t1.exon1;Parent=MS.gene44789.t1 |
chr7.4 | CDS | 81776900 | 81779047 | 81776900 | ID=cds.MS.gene44789.t1;Parent=MS.gene44789.t1 |
Gene Sequence |
Protein sequence |