Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45648.t1 | XP_013444028.1 | 93 | 866 | 60 | 1 | 1 | 865 | 1 | 866 | 0.00E+00 | 1427.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45648.t1 | Q9SHG6 | 53.2 | 870 | 368 | 11 | 3 | 860 | 1 | 843 | 4.6e-224 | 779.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45648.t1 | A0A072TWY2 | 93.0 | 866 | 60 | 1 | 1 | 865 | 1 | 866 | 0.0e+00 | 1427.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene45648 | 0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene050689 | MS.gene45648 | 0.813875 | 2.05E-51 | -1.69E-46 |
| MS.gene050737 | MS.gene45648 | 0.832244 | 1.06E-55 | -1.69E-46 |
| MS.gene050941 | MS.gene45648 | 0.829842 | 4.10E-55 | -1.69E-46 |
| MS.gene052518 | MS.gene45648 | 0.804523 | 2.07E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene45648 | 0.818877 | 1.56E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene45648 | 0.807581 | 4.71E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene45648 | 0.801724 | 7.87E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene45648 | 0.801826 | 7.50E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene45648 | 0.814492 | 1.50E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene45648 | 0.806056 | 9.90E-50 | -1.69E-46 |
| MS.gene060085 | MS.gene45648 | 0.802219 | 6.22E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene45648 | 0.807854 | 4.12E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene45648 | 0.828407 | 9.15E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene45648 | 0.82969 | 4.47E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene45648 | 0.82791 | 1.20E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45648.t1 | MTR_8g010350 | 96.078 | 867 | 31 | 3 | 1 | 865 | 1 | 866 | 0.0 | 1717 |
| MS.gene45648.t1 | MTR_7g070290 | 77.576 | 495 | 101 | 4 | 378 | 865 | 126 | 617 | 0.0 | 760 |
| MS.gene45648.t1 | MTR_7g070290 | 30.805 | 435 | 241 | 17 | 187 | 607 | 57 | 445 | 6.34e-31 | 129 |
| MS.gene45648.t1 | MTR_7g070290 | 52.055 | 73 | 25 | 2 | 43 | 113 | 3 | 67 | 7.18e-12 | 69.7 |
| MS.gene45648.t1 | MTR_7g070300 | 43.438 | 320 | 122 | 13 | 24 | 292 | 14 | 325 | 1.40e-45 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45648.t1 | AT1G17070 | 53.628 | 882 | 346 | 15 | 3 | 860 | 1 | 843 | 0.0 | 834 |
| MS.gene45648.t1 | AT2G42330 | 48.452 | 840 | 332 | 15 | 34 | 865 | 6 | 752 | 0.0 | 721 |
| MS.gene45648.t1 | AT2G42330 | 48.452 | 840 | 332 | 15 | 34 | 865 | 6 | 752 | 0.0 | 721 |
| MS.gene45648.t1 | AT2G42330 | 48.452 | 840 | 332 | 15 | 34 | 865 | 6 | 752 | 0.0 | 721 |
Find 217 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACCATGTCTCCTCATTT+TGG | 0.120770 | 8.3:+78183839 | None:intergenic |
| TGAAGTTACAAAATGGTATT+TGG | 0.125933 | 8.3:-78184259 | MS.gene45648:CDS |
| CCTGGTTTAGGGTTAGGTTT+TGG | 0.151973 | 8.3:-78186028 | MS.gene45648:CDS |
| CACAACGGTCATCAAATATA+TGG | 0.248012 | 8.3:-78183913 | MS.gene45648:CDS |
| TCCATATATAACATCGTCTT+TGG | 0.271281 | 8.3:+78186234 | None:intergenic |
| TCATTTGCCAAAAGTTCTTT+TGG | 0.273610 | 8.3:+78184219 | None:intergenic |
| TTCAAATTGAGTACTGTTCT+TGG | 0.275822 | 8.3:-78184576 | MS.gene45648:CDS |
| CTCATCAACATTATCCTTAT+CGG | 0.278789 | 8.3:+78186087 | None:intergenic |
| CCCACTGCACTTGATAGTTT+TGG | 0.287889 | 8.3:+78184702 | None:intergenic |
| TCTCTCCTTCTCCCTCTTCA+TGG | 0.290858 | 8.3:+78185859 | None:intergenic |
| TTCCCTTGCTCAATGCTTTA+CGG | 0.291345 | 8.3:-78185090 | MS.gene45648:CDS |
| GAAGAAGATAGGCCTGGTTT+AGG | 0.292810 | 8.3:-78186040 | MS.gene45648:CDS |
| AAGAAGCCGGGCATTGGTTT+AGG | 0.293073 | 8.3:-78185812 | MS.gene45648:CDS |
| TCTGAAACCAATTGAGTATA+AGG | 0.301102 | 8.3:+78184867 | None:intergenic |
| ACTTATTCCAAAAGAACTTT+TGG | 0.305783 | 8.3:-78184226 | MS.gene45648:CDS |
| GAAGGTGGCCAATGGGTTAA+TGG | 0.309537 | 8.3:-78186301 | MS.gene45648:CDS |
| AGTATCTCGGGGTCTGGTTT+AGG | 0.309623 | 8.3:-78185998 | MS.gene45648:CDS |
| TTGTGCGTTCTACCAGATTT+AGG | 0.311130 | 8.3:+78183931 | None:intergenic |
| ACCAAAGACGATGTTATATA+TGG | 0.321878 | 8.3:-78186235 | MS.gene45648:CDS |
| GAGGCTTATGCTCGGGATAA+TGG | 0.323040 | 8.3:-78183967 | MS.gene45648:CDS |
| TTTGTAACTTCATCAAAGTT+AGG | 0.326962 | 8.3:+78184270 | None:intergenic |
| TTGCCAGCTGTCAGAGTATC+TGG | 0.339471 | 8.3:-78184837 | MS.gene45648:CDS |
| TTCTTCTCTGTCTGCAAAAC+GGG | 0.347374 | 8.3:+78185590 | None:intergenic |
| CTTGAGAAGATGGGTTATAA+AGG | 0.348414 | 8.3:-78185725 | MS.gene45648:CDS |
| AGGAGAAGATAAGCTATATC+AGG | 0.352380 | 8.3:-78184113 | MS.gene45648:CDS |
| TTTGGGTCGGCTAGTATCTC+GGG | 0.355857 | 8.3:-78186010 | MS.gene45648:CDS |
| TGATCAAGATTCTGACTTGC+CGG | 0.356856 | 8.3:+78184408 | None:intergenic |
| ACTTTGATGAAGTTACAAAA+TGG | 0.363094 | 8.3:-78184266 | MS.gene45648:CDS |
| TTACTGTTCAAACCTAAATC+TGG | 0.369481 | 8.3:-78183943 | MS.gene45648:CDS |
| GTCATCACCTTATACTCAAT+TGG | 0.369878 | 8.3:-78184874 | MS.gene45648:CDS |
| CCCATCATCATCGTAGTCTT+CGG | 0.369989 | 8.3:+78186198 | None:intergenic |
| TATCAAGTGCAGTGGGTACT+TGG | 0.373265 | 8.3:-78184695 | MS.gene45648:CDS |
| TCGAAATCCATCTCATGGTT+TGG | 0.376763 | 8.3:-78184958 | MS.gene45648:CDS |
| CAAGCTGCTGCAAGCATGGC+TGG | 0.379886 | 8.3:-78184033 | MS.gene45648:CDS |
| TGCAAGACAGCCTTCAGCTT+TGG | 0.383113 | 8.3:+78184450 | None:intergenic |
| TTCAGAAGATTTATGATATG+AGG | 0.386976 | 8.3:-78185424 | MS.gene45648:CDS |
| AATCTGATGAGAATGATAAT+CGG | 0.389779 | 8.3:-78185931 | MS.gene45648:CDS |
| GATAGGCCTGGTTTAGGGTT+AGG | 0.390604 | 8.3:-78186034 | MS.gene45648:CDS |
| GAGAGTCATACAAAGGGAAT+TGG | 0.392137 | 8.3:-78185758 | MS.gene45648:CDS |
| AAGAAGATAGGCCTGGTTTA+GGG | 0.393008 | 8.3:-78186039 | MS.gene45648:CDS |
| TTGGGTTATGAACTGGGCTT+CGG | 0.393328 | 8.3:-78184379 | MS.gene45648:CDS |
| CATCCATGGCTACCCCTGCT+AGG | 0.404541 | 8.3:-78184633 | MS.gene45648:CDS |
| GCCCTCAACTTTGCCTCAAT+AGG | 0.405496 | 8.3:+78185665 | None:intergenic |
| GTGTCAACCATCAGATGAAT+TGG | 0.408091 | 8.3:+78184351 | None:intergenic |
| AGGAGGGAGCTGTGGATGTT+GGG | 0.409566 | 8.3:-78185787 | MS.gene45648:CDS |
| CCATCATCATCGTAGTCTTC+GGG | 0.411589 | 8.3:+78186199 | None:intergenic |
| GATCAAGAGATGGAGAATTT+CGG | 0.416250 | 8.3:-78186340 | MS.gene45648:CDS |
| GAAGAGGGAGAAGGAGAGAT+TGG | 0.416692 | 8.3:-78185855 | MS.gene45648:CDS |
| CTTCTTTGCCAAGTGGCTTA+CGG | 0.416957 | 8.3:-78184319 | MS.gene45648:CDS |
| GAAGAAGAAGGGGAAGAAGC+CGG | 0.421415 | 8.3:-78185825 | MS.gene45648:CDS |
| TCAAATCTCTATCAATCTCT+TGG | 0.426322 | 8.3:+78185270 | None:intergenic |
| CCTCCAGCTTGTGCCCTAGC+AGG | 0.432848 | 8.3:+78184619 | None:intergenic |
| TTCGAAGAGGATCCCATCCT+TGG | 0.432902 | 8.3:+78184976 | None:intergenic |
| GGTCATCAAATATATGGGTT+TGG | 0.434302 | 8.3:-78183907 | MS.gene45648:CDS |
| TTGAGAAGATGGGTTATAAA+GGG | 0.445982 | 8.3:-78185724 | MS.gene45648:CDS |
| TGCGTTTGGGAAGATGATTA+AGG | 0.446702 | 8.3:-78185888 | MS.gene45648:CDS |
| TCAATTTGAAACGAATTGTC+TGG | 0.447524 | 8.3:+78184589 | None:intergenic |
| TCATCAACATTATCCTTATC+GGG | 0.448438 | 8.3:+78186088 | None:intergenic |
| GGCTATTCCAATTCATCTGA+TGG | 0.452495 | 8.3:-78184358 | MS.gene45648:CDS |
| CAGTTGGAAGAACACGTTCA+TGG | 0.454365 | 8.3:-78185541 | MS.gene45648:CDS |
| CAGGAGGGAGCTGTGGATGT+TGG | 0.458207 | 8.3:-78185788 | MS.gene45648:CDS |
| CTTCTTCTCTGTCTGCAAAA+CGG | 0.458538 | 8.3:+78185589 | None:intergenic |
| CAGTGGAAGGCATTGCTTCA+AGG | 0.460014 | 8.3:-78184924 | MS.gene45648:CDS |
| TTACAAAATGGTATTTGGGC+TGG | 0.461685 | 8.3:-78184254 | MS.gene45648:CDS |
| AGGATGATGGTGAAGAAGAT+AGG | 0.462708 | 8.3:-78186051 | MS.gene45648:CDS |
| GCCGGGCATTGGTTTAGGTC+AGG | 0.463580 | 8.3:-78185807 | MS.gene45648:CDS |
| GACAGAGAAGAAGACTGAAC+CGG | 0.467128 | 8.3:-78185579 | MS.gene45648:CDS |
| CCAGTTGAAACAAAATTCAC+AGG | 0.467449 | 8.3:+78186121 | None:intergenic |
| TGATGAGAATTTGAAAGAAC+AGG | 0.467505 | 8.3:-78186071 | MS.gene45648:CDS |
| TCTATCAATCTCTTGGATGT+TGG | 0.469174 | 8.3:+78185277 | None:intergenic |
| TGTAACTGCTAAGGAGTTGT+TGG | 0.469240 | 8.3:-78185477 | MS.gene45648:CDS |
| GAAGTTACAAAATGGTATTT+GGG | 0.470045 | 8.3:-78184258 | MS.gene45648:CDS |
| TTGGAGGAGAAGAAGAAGAA+GGG | 0.470912 | 8.3:-78185836 | MS.gene45648:CDS |
| AATCGACTCTCTAAATCAAA+AGG | 0.472047 | 8.3:-78183869 | MS.gene45648:CDS |
| ATCTGATGAGAATGATAATC+GGG | 0.472333 | 8.3:-78185930 | MS.gene45648:CDS |
| TCGGCTAGTATCTCGGGGTC+TGG | 0.472352 | 8.3:-78186004 | MS.gene45648:CDS |
| TCTGACTTGCCGGGTTCACT+TGG | 0.475554 | 8.3:+78184418 | None:intergenic |
| AATGAAGCTGCTTGAGAAGA+TGG | 0.478922 | 8.3:-78185735 | MS.gene45648:CDS |
| GTTGGAGAAGAGAACACCTT+AGG | 0.479578 | 8.3:-78185128 | MS.gene45648:CDS |
| AAGAAGAAGGGGAAGAAGCC+GGG | 0.485235 | 8.3:-78185824 | MS.gene45648:CDS |
| CATATGCTATATTGTCCCCT+TGG | 0.485482 | 8.3:-78184527 | MS.gene45648:CDS |
| AGCATGGCTGGTGGCGCAGA+TGG | 0.487215 | 8.3:-78184021 | MS.gene45648:CDS |
| ATCCATGGCTACCCCTGCTA+GGG | 0.489307 | 8.3:-78184632 | MS.gene45648:CDS |
| AAGGGGAAGAAGCCGGGCAT+TGG | 0.491690 | 8.3:-78185818 | MS.gene45648:CDS |
| TATACTGAAGCTCAGGCATT+GGG | 0.492735 | 8.3:+78185330 | None:intergenic |
| CCCGAAGACTACGATGATGA+TGG | 0.493497 | 8.3:-78186199 | MS.gene45648:CDS |
| TGCCCTAGCAGGGGTAGCCA+TGG | 0.494447 | 8.3:+78184630 | None:intergenic |
| CTTATCTTCTCCTTCAAACC+AGG | 0.494860 | 8.3:+78184123 | None:intergenic |
| ACCCCTGCTAGGGCACAAGC+TGG | 0.496535 | 8.3:-78184622 | MS.gene45648:CDS |
| CTGTATTTGATTCTGATAGC+TGG | 0.496901 | 8.3:-78184500 | MS.gene45648:CDS |
| GATCAAGATTCTGACTTGCC+GGG | 0.497039 | 8.3:+78184409 | None:intergenic |
| TTATACTGAAGCTCAGGCAT+TGG | 0.497443 | 8.3:+78185329 | None:intergenic |
| ATCCAATGTTAATGTTCCTA+AGG | 0.499131 | 8.3:+78185112 | None:intergenic |
| TCAGCTTTGGTACGATAAAA+CGG | 0.499436 | 8.3:+78184463 | None:intergenic |
| AAGAGATTGATAGAGATTTG+AGG | 0.504347 | 8.3:-78185268 | MS.gene45648:CDS |
| CACCTTAGGAACATTAACAT+TGG | 0.505825 | 8.3:-78185114 | MS.gene45648:CDS |
| TCCTATTGAGGCAAAGTTGA+GGG | 0.506308 | 8.3:-78185666 | MS.gene45648:CDS |
| ATAACGTAGCACTAATAGTT+CGG | 0.507572 | 8.3:-78185310 | MS.gene45648:CDS |
| ATCTTATTGAGGCTTATGCT+CGG | 0.511086 | 8.3:-78183975 | MS.gene45648:CDS |
| ATAGAGATTTGAGGAAAGAG+AGG | 0.513041 | 8.3:-78185259 | MS.gene45648:CDS |
| GCCAAAACTATCAAGTGCAG+TGG | 0.513710 | 8.3:-78184703 | MS.gene45648:CDS |
| ATTGGAGGAGAAGAAGAAGA+AGG | 0.514247 | 8.3:-78185837 | MS.gene45648:CDS |
| GTATCAATACTTGGCATGCA+CGG | 0.515579 | 8.3:-78184815 | MS.gene45648:CDS |
| ACAACGGTCATCAAATATAT+GGG | 0.518474 | 8.3:-78183912 | MS.gene45648:CDS |
| ACAACAAGCTGCTGCAAGCA+TGG | 0.518724 | 8.3:-78184037 | MS.gene45648:CDS |
| TCCACACATGGGTGCATCCA+TGG | 0.522047 | 8.3:-78184647 | MS.gene45648:CDS |
| TGGAGGAGAAGAAGAAGAAG+GGG | 0.524605 | 8.3:-78185835 | MS.gene45648:CDS |
| TCAGAAGATTTATGATATGA+GGG | 0.525953 | 8.3:-78185423 | MS.gene45648:CDS |
| TCTTATTGAGGCTTATGCTC+GGG | 0.526021 | 8.3:-78183974 | MS.gene45648:CDS |
| TCCATCTCATGGTTTGGAGT+TGG | 0.526127 | 8.3:-78184952 | MS.gene45648:CDS |
| GGTTGTGCAACCTGGTTTGA+AGG | 0.528723 | 8.3:-78184133 | MS.gene45648:CDS |
| GCTACGTTATACTGAAGCTC+AGG | 0.531815 | 8.3:+78185323 | None:intergenic |
| GAACCAGGCTGTTGAAGGTA+TGG | 0.534382 | 8.3:-78184157 | MS.gene45648:CDS |
| ATAGTAGCAAGAACTGAAGA+AGG | 0.534632 | 8.3:+78184744 | None:intergenic |
| TTTAGGTCAGGAGGGAGCTG+TGG | 0.534834 | 8.3:-78185795 | MS.gene45648:CDS |
| AATGCTGGTCGTGGTGTGAA+TGG | 0.539364 | 8.3:-78185971 | MS.gene45648:CDS |
| GAGGGAGAAGGAGAGATTGG+AGG | 0.540333 | 8.3:-78185852 | MS.gene45648:CDS |
| TATCAGAATGTTCCAAGGAT+GGG | 0.541188 | 8.3:-78184988 | MS.gene45648:CDS |
| CAGAAGATTTATGATATGAG+GGG | 0.544424 | 8.3:-78185422 | MS.gene45648:CDS |
| GGAAAAGTATGTAACTGCTA+AGG | 0.545075 | 8.3:-78185486 | MS.gene45648:CDS |
| TTATCAGAATGTTCCAAGGA+TGG | 0.545083 | 8.3:-78184989 | MS.gene45648:CDS |
| TATCAATACTTGGCATGCAC+GGG | 0.546744 | 8.3:-78184814 | MS.gene45648:CDS |
| TCTGGTTTAGGATTTAATGC+TGG | 0.547046 | 8.3:-78185986 | MS.gene45648:CDS |
| CCTCTTCGAAATCCATCTCA+TGG | 0.547824 | 8.3:-78184963 | MS.gene45648:CDS |
| CTCCAGCTTGTGCCCTAGCA+GGG | 0.548394 | 8.3:+78184620 | None:intergenic |
| TGAAAAGATAATGAGTGTGC+TGG | 0.550040 | 8.3:-78185156 | MS.gene45648:CDS |
| GGTATGGAGGTTGTGCAACC+TGG | 0.550151 | 8.3:-78184141 | MS.gene45648:CDS |
| TCATCTGATGGTTGACACAA+TGG | 0.550438 | 8.3:-78184346 | MS.gene45648:CDS |
| TGGTCTTGGGAAGAATGAGC+AGG | 0.554574 | 8.3:-78185699 | MS.gene45648:CDS |
| TTATACTCAATTGGTTTCAG+AGG | 0.556724 | 8.3:-78184865 | MS.gene45648:CDS |
| ATCAAGTGCAGTGGGTACTT+GGG | 0.558150 | 8.3:-78184694 | MS.gene45648:CDS |
| ACAGAGAAGAAGACTGAACC+GGG | 0.558425 | 8.3:-78185578 | MS.gene45648:CDS |
| AGCAGCTTGTTGTTGAGCAG+AGG | 0.559345 | 8.3:+78184047 | None:intergenic |
| CAAAACGGGCAACGGCATAG+TGG | 0.559472 | 8.3:+78185604 | None:intergenic |
| GAGTATCTGGTATCAATACT+TGG | 0.559939 | 8.3:-78184824 | MS.gene45648:CDS |
| TATAGATGAGGATCAAGAGA+TGG | 0.560053 | 8.3:-78186350 | MS.gene45648:CDS |
| GCTGCTGCAAGCATGGCTGG+TGG | 0.561489 | 8.3:-78184030 | MS.gene45648:CDS |
| ACTGTAGGCTGCACAACCCC+CGG | 0.561582 | 8.3:+78185560 | None:intergenic |
| GCATATGCAGAACCATCACT+TGG | 0.561871 | 8.3:+78184543 | None:intergenic |
| GAGAGCCATGAAGAGGGAGA+AGG | 0.561897 | 8.3:-78185864 | MS.gene45648:CDS |
| GAATCAAATACAGTCTTCCA+AGG | 0.562070 | 8.3:+78184510 | None:intergenic |
| GGAGTTGGTATCACAGTGGA+AGG | 0.562462 | 8.3:-78184937 | MS.gene45648:CDS |
| AAAGGAGAAGTTGGAAGCTG+AGG | 0.562740 | 8.3:-78185210 | MS.gene45648:CDS |
| TTTGAGTTCGAGCTTTCTCT+CGG | 0.562831 | 8.3:+78186257 | None:intergenic |
| TTAGGATTTAATGCTGGTCG+TGG | 0.567508 | 8.3:-78185980 | MS.gene45648:CDS |
| AGATGACTTCCAAGTGAACC+CGG | 0.567771 | 8.3:-78184427 | MS.gene45648:CDS |
| GGTGCATGGCACCCAAGTGA+TGG | 0.568932 | 8.3:-78184555 | MS.gene45648:CDS |
| CCGAAGACTACGATGATGAT+GGG | 0.576988 | 8.3:-78186198 | MS.gene45648:CDS |
| ATGATGAACCAGGCTGTTGA+AGG | 0.577293 | 8.3:-78184162 | MS.gene45648:CDS |
| GGGGTTGTGCAGCCTACAGT+TGG | 0.578126 | 8.3:-78185557 | MS.gene45648:CDS |
| TAAGCAAGAAGAAGAGTCAG+AGG | 0.579514 | 8.3:-78185450 | MS.gene45648:CDS |
| ATACAAAACCGTAAGCCACT+TGG | 0.580893 | 8.3:+78184311 | None:intergenic |
| CCTCCATACCTTCAACAGCC+TGG | 0.581127 | 8.3:+78184154 | None:intergenic |
| GAGCGTGAAAGATCTTATTG+AGG | 0.582014 | 8.3:-78183986 | MS.gene45648:CDS |
| AAAGGTCTATGCCCAAAATG+AGG | 0.582372 | 8.3:-78183851 | MS.gene45648:CDS |
| TAGAGATTTGAGGAAAGAGA+GGG | 0.583409 | 8.3:-78185258 | MS.gene45648:CDS |
| AGAAATCACCATTAACCCAT+TGG | 0.583638 | 8.3:+78186293 | None:intergenic |
| ACCAACTCCAAACCATGAGA+TGG | 0.585318 | 8.3:+78184951 | None:intergenic |
| TGAGAAGATGGGTTATAAAG+GGG | 0.586441 | 8.3:-78185723 | MS.gene45648:CDS |
| TCTGTCTGCAAAACGGGCAA+CGG | 0.587541 | 8.3:+78185596 | None:intergenic |
| TCTTGGATTTAACGAATCGA+AGG | 0.588690 | 8.3:-78185630 | MS.gene45648:CDS |
| AAATTCGAGAGTCATACAAA+GGG | 0.591053 | 8.3:-78185764 | MS.gene45648:CDS |
| TTGTTTATCAGAATGTTCCA+AGG | 0.593879 | 8.3:-78184993 | MS.gene45648:CDS |
| ATCCTATTGAGGCAAAGTTG+AGG | 0.595316 | 8.3:-78185667 | MS.gene45648:CDS |
| TAAGGAGAGAGCCATGAAGA+GGG | 0.595678 | 8.3:-78185870 | MS.gene45648:CDS |
| ATACCAGATACTCTGACAGC+TGG | 0.595723 | 8.3:+78184834 | None:intergenic |
| GAAATTCGAGAGTCATACAA+AGG | 0.599821 | 8.3:-78185765 | MS.gene45648:CDS |
| GATGGTGAAGAAGATAGGCC+TGG | 0.601036 | 8.3:-78186046 | MS.gene45648:CDS |
| GGCATTGGTTTAGGTCAGGA+GGG | 0.601669 | 8.3:-78185803 | MS.gene45648:CDS |
| GGAGAAGATAAGCTATATCA+GGG | 0.605602 | 8.3:-78184112 | MS.gene45648:CDS |
| AATCAAATACAGTCTTCCAA+GGG | 0.606618 | 8.3:+78184511 | None:intergenic |
| ATTCGATACAAGCTCAATTG+TGG | 0.607064 | 8.3:-78184192 | MS.gene45648:CDS |
| TTAGAAGATGGATATAGATG+AGG | 0.607275 | 8.3:-78186362 | None:intergenic |
| TGGAGATCTTCTTTGCCAAG+TGG | 0.608455 | 8.3:-78184326 | MS.gene45648:CDS |
| GGATGCACCCATGTGTGGAT+AGG | 0.608809 | 8.3:+78184651 | None:intergenic |
| TCCTGACCTAAACCAATGCC+CGG | 0.610190 | 8.3:+78185806 | None:intergenic |
| ATGAAGCTGCTTGAGAAGAT+GGG | 0.610235 | 8.3:-78185734 | MS.gene45648:CDS |
| CTTGGATTTAACGAATCGAA+GGG | 0.614678 | 8.3:-78185629 | MS.gene45648:CDS |
| GAACGTGTTCTTCCAACTGT+AGG | 0.614749 | 8.3:+78185545 | None:intergenic |
| TCCAGCTTGTGCCCTAGCAG+GGG | 0.617024 | 8.3:+78184621 | None:intergenic |
| TGGAACATTCTGATAAACAA+AGG | 0.617370 | 8.3:+78184996 | None:intergenic |
| AGACTATTCCTATCCACACA+TGG | 0.617573 | 8.3:-78184659 | MS.gene45648:CDS |
| GCCATGGATGCACCCATGTG+TGG | 0.620709 | 8.3:+78184646 | None:intergenic |
| TTTGTCTGATTTGAATGCTG+AGG | 0.621521 | 8.3:-78185375 | MS.gene45648:CDS |
| GGGCATTGGTTTAGGTCAGG+AGG | 0.622016 | 8.3:-78185804 | MS.gene45648:CDS |
| ATGCCCAAAATGAGGAGACA+TGG | 0.624654 | 8.3:-78183843 | MS.gene45648:CDS |
| TGTCCGTAAAGCATTGAGCA+AGG | 0.624936 | 8.3:+78185087 | None:intergenic |
| CCAAAACCTAACCCTAAACC+AGG | 0.625240 | 8.3:+78186028 | None:intergenic |
| ATATCAGGGTAAGTGAGCAA+AGG | 0.626469 | 8.3:-78184098 | MS.gene45648:CDS |
| GAGAAGATGGGTTATAAAGG+GGG | 0.630333 | 8.3:-78185722 | MS.gene45648:CDS |
| GTCCGTAAAGCATTGAGCAA+GGG | 0.632161 | 8.3:+78185088 | None:intergenic |
| TGAGTACTGTTCTTGGTGCA+TGG | 0.632481 | 8.3:-78184569 | MS.gene45648:CDS |
| GAATGCTGAGGAGAAAGCAA+AGG | 0.632682 | 8.3:-78185363 | MS.gene45648:CDS |
| CATGCACAAAAGATTTGCTG+AGG | 0.634301 | 8.3:-78185066 | MS.gene45648:CDS |
| AATTTGAAAGAACAGGATGA+TGG | 0.635084 | 8.3:-78186064 | MS.gene45648:CDS |
| GGGATCCTGAACCAATGCTA+CGG | 0.635248 | 8.3:-78184794 | MS.gene45648:CDS |
| CCATGAGATGGATTTCGAAG+AGG | 0.636233 | 8.3:+78184963 | None:intergenic |
| ATGAGTGTGCTGGACAGAGT+TGG | 0.636674 | 8.3:-78185146 | MS.gene45648:CDS |
| TTAAGGAGAGAGCCATGAAG+AGG | 0.637194 | 8.3:-78185871 | MS.gene45648:CDS |
| AGAAGATTTATGATATGAGG+GGG | 0.637702 | 8.3:-78185421 | MS.gene45648:CDS |
| CCAAAACTATCAAGTGCAGT+GGG | 0.645728 | 8.3:-78184702 | MS.gene45648:CDS |
| TTGGGTCGGCTAGTATCTCG+GGG | 0.651866 | 8.3:-78186009 | MS.gene45648:CDS |
| TCTGTTAAAACTCGTACCTG+CGG | 0.658982 | 8.3:+78185398 | None:intergenic |
| ATCATCTTCCCAAACGCAGT+AGG | 0.663558 | 8.3:+78185893 | None:intergenic |
| GACTATTCCTATCCACACAT+GGG | 0.664132 | 8.3:-78184658 | MS.gene45648:CDS |
| CCAGGCTGTTGAAGGTATGG+AGG | 0.671559 | 8.3:-78184154 | MS.gene45648:CDS |
| AGAGATGGAGAATTTCGGAA+CGG | 0.680307 | 8.3:-78186335 | MS.gene45648:CDS |
| ATAGGAATAGTCTCAAGATG+TGG | 0.683050 | 8.3:+78184669 | None:intergenic |
| GGTCTTGGGAAGAATGAGCA+GGG | 0.684826 | 8.3:-78185698 | MS.gene45648:CDS |
| CATATGCAGAACCATCACTT+GGG | 0.687563 | 8.3:+78184544 | None:intergenic |
| ATCAAATACAGTCTTCCAAG+GGG | 0.688889 | 8.3:+78184512 | None:intergenic |
| CCTGCTAGGGCACAAGCTGG+AGG | 0.690416 | 8.3:-78184619 | MS.gene45648:CDS |
| TGGTCTTGATATGATGAACC+AGG | 0.696080 | 8.3:-78184172 | MS.gene45648:CDS |
| CAGAGAAGAAGACTGAACCG+GGG | 0.707743 | 8.3:-78185577 | MS.gene45648:CDS |
| AGAGAAGAAGACTGAACCGG+GGG | 0.713315 | 8.3:-78185576 | MS.gene45648:CDS |
| GTTTGGAGTTGGTATCACAG+TGG | 0.727402 | 8.3:-78184941 | MS.gene45648:CDS |
| AAATCTGGTAGAACGCACAA+CGG | 0.732054 | 8.3:-78183928 | MS.gene45648:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTCTTTATTTTTTTTCTT+CGG | + | chr8.3:78184629-78184648 | None:intergenic | 15.0% |
| !! | GAAGAAAAAAAATAAAGAAG+AGG | - | chr8.3:78184628-78184647 | MS.gene45648:CDS | 20.0% |
| !!! | AGAATCTTGATCAATTTTAT+TGG | - | chr8.3:78185737-78185756 | MS.gene45648:CDS | 20.0% |
| !!! | AGATGATTGTTTTGATATAT+GGG | - | chr8.3:78185234-78185253 | MS.gene45648:CDS | 20.0% |
| !!! | GAATCTTGATCAATTTTATT+GGG | - | chr8.3:78185738-78185757 | MS.gene45648:CDS | 20.0% |
| ! | AATCTGATGAGAATGATAAT+CGG | - | chr8.3:78184204-78184223 | MS.gene45648:CDS | 25.0% |
| ! | ACTTTGATGAAGTTACAAAA+TGG | - | chr8.3:78185869-78185888 | MS.gene45648:CDS | 25.0% |
| ! | GAAGTTACAAAATGGTATTT+GGG | - | chr8.3:78185877-78185896 | MS.gene45648:CDS | 25.0% |
| ! | TCAGAAGATTTATGATATGA+GGG | - | chr8.3:78184712-78184731 | MS.gene45648:CDS | 25.0% |
| ! | TGAAGTTACAAAATGGTATT+TGG | - | chr8.3:78185876-78185895 | MS.gene45648:CDS | 25.0% |
| ! | TTCAGAAGATTTATGATATG+AGG | - | chr8.3:78184711-78184730 | MS.gene45648:CDS | 25.0% |
| ! | TTTGTAACTTCATCAAAGTT+AGG | + | chr8.3:78185868-78185887 | None:intergenic | 25.0% |
| !! | AAAAAGCGAAGAAAAGATTT+TGG | - | chr8.3:78183969-78183988 | MS.gene45648:CDS | 25.0% |
| !! | AATTTTATTGGGTTATGAAC+TGG | - | chr8.3:78185749-78185768 | MS.gene45648:CDS | 25.0% |
| !! | ACTTAGCTTGAAAAAAGAAA+AGG | - | chr8.3:78184907-78184926 | MS.gene45648:CDS | 25.0% |
| !! | ACTTATTCCAAAAGAACTTT+TGG | - | chr8.3:78185909-78185928 | MS.gene45648:CDS | 25.0% |
| !! | ATTTTATTGGGTTATGAACT+GGG | - | chr8.3:78185750-78185769 | MS.gene45648:CDS | 25.0% |
| !! | GATGTTATATATGGAGTTTT+TGG | - | chr8.3:78183909-78183928 | MS.gene45648:CDS | 25.0% |
| !!! | GAGATGATTGTTTTGATATA+TGG | - | chr8.3:78185233-78185252 | MS.gene45648:CDS | 25.0% |
| !!! | TCTTTATTTTTTTTCTTCGG+CGG | + | chr8.3:78184626-78184645 | None:intergenic | 25.0% |
| AAATTCGAGAGTCATACAAA+GGG | - | chr8.3:78184371-78184390 | MS.gene45648:CDS | 30.0% | |
| AAGAGATTGATAGAGATTTG+AGG | - | chr8.3:78184867-78184886 | MS.gene45648:CDS | 30.0% | |
| AATCAAATACAGTCTTCCAA+GGG | + | chr8.3:78185627-78185646 | None:intergenic | 30.0% | |
| AATTTGAAAGAACAGGATGA+TGG | - | chr8.3:78184071-78184090 | MS.gene45648:CDS | 30.0% | |
| ACAACGGTCATCAAATATAT+GGG | - | chr8.3:78186223-78186242 | MS.gene45648:CDS | 30.0% | |
| ACCAAAGACGATGTTATATA+TGG | - | chr8.3:78183900-78183919 | MS.gene45648:CDS | 30.0% | |
| AGAAGATTTATGATATGAGG+GGG | - | chr8.3:78184714-78184733 | MS.gene45648:CDS | 30.0% | |
| ATAACGTAGCACTAATAGTT+CGG | - | chr8.3:78184825-78184844 | MS.gene45648:CDS | 30.0% | |
| ATCCAATGTTAATGTTCCTA+AGG | + | chr8.3:78185026-78185045 | None:intergenic | 30.0% | |
| ATCTGATGAGAATGATAATC+GGG | - | chr8.3:78184205-78184224 | MS.gene45648:CDS | 30.0% | |
| CAGAAGATTTATGATATGAG+GGG | - | chr8.3:78184713-78184732 | MS.gene45648:CDS | 30.0% | |
| CTCATCAACATTATCCTTAT+CGG | + | chr8.3:78184051-78184070 | None:intergenic | 30.0% | |
| GAAAAAAGAAAAGGAGAAGT+TGG | - | chr8.3:78184916-78184935 | MS.gene45648:CDS | 30.0% | |
| TCAAATCTCTATCAATCTCT+TGG | + | chr8.3:78184868-78184887 | None:intergenic | 30.0% | |
| TCATCAACATTATCCTTATC+GGG | + | chr8.3:78184050-78184069 | None:intergenic | 30.0% | |
| TCCATATATAACATCGTCTT+TGG | + | chr8.3:78183904-78183923 | None:intergenic | 30.0% | |
| TGATGAGAATTTGAAAGAAC+AGG | - | chr8.3:78184064-78184083 | MS.gene45648:CDS | 30.0% | |
| TGGAACATTCTGATAAACAA+AGG | + | chr8.3:78185142-78185161 | None:intergenic | 30.0% | |
| TTACTGTTCAAACCTAAATC+TGG | - | chr8.3:78186192-78186211 | MS.gene45648:CDS | 30.0% | |
| TTGTTTATCAGAATGTTCCA+AGG | - | chr8.3:78185142-78185161 | MS.gene45648:CDS | 30.0% | |
| ! | AATCGACTCTCTAAATCAAA+AGG | - | chr8.3:78186266-78186285 | MS.gene45648:CDS | 30.0% |
| ! | TCAATTTGAAACGAATTGTC+TGG | + | chr8.3:78185549-78185568 | None:intergenic | 30.0% |
| ! | TCATTTGCCAAAAGTTCTTT+TGG | + | chr8.3:78185919-78185938 | None:intergenic | 30.0% |
| ! | TCTGAAACCAATTGAGTATA+AGG | + | chr8.3:78185271-78185290 | None:intergenic | 30.0% |
| ! | TTATACTCAATTGGTTTCAG+AGG | - | chr8.3:78185270-78185289 | MS.gene45648:CDS | 30.0% |
| ! | TTCAAATTGAGTACTGTTCT+TGG | - | chr8.3:78185559-78185578 | MS.gene45648:CDS | 30.0% |
| !! | AAAAGATTTTGGAAGGAAAC+AGG | - | chr8.3:78183980-78183999 | MS.gene45648:CDS | 30.0% |
| !! | TTGAGAAGATGGGTTATAAA+GGG | - | chr8.3:78184411-78184430 | MS.gene45648:CDS | 30.0% |
| AAGTTGAGGGCTAAAAATTC+TGG | - | chr8.3:78184482-78184501 | MS.gene45648:CDS | 35.0% | |
| AGAAATCACCATTAACCCAT+TGG | + | chr8.3:78183845-78183864 | None:intergenic | 35.0% | |
| AGGAGAAGATAAGCTATATC+AGG | - | chr8.3:78186022-78186041 | MS.gene45648:CDS | 35.0% | |
| ATAGAGATTTGAGGAAAGAG+AGG | - | chr8.3:78184876-78184895 | MS.gene45648:CDS | 35.0% | |
| ATAGGAATAGTCTCAAGATG+TGG | + | chr8.3:78185469-78185488 | None:intergenic | 35.0% | |
| ATAGTAGCAAGAACTGAAGA+AGG | + | chr8.3:78185394-78185413 | None:intergenic | 35.0% | |
| ATCAAATACAGTCTTCCAAG+GGG | + | chr8.3:78185626-78185645 | None:intergenic | 35.0% | |
| ATCTTATTGAGGCTTATGCT+CGG | - | chr8.3:78186160-78186179 | MS.gene45648:CDS | 35.0% | |
| ATTCGATACAAGCTCAATTG+TGG | - | chr8.3:78185943-78185962 | MS.gene45648:CDS | 35.0% | |
| CACAACGGTCATCAAATATA+TGG | - | chr8.3:78186222-78186241 | MS.gene45648:CDS | 35.0% | |
| CACCTTAGGAACATTAACAT+TGG | - | chr8.3:78185021-78185040 | MS.gene45648:CDS | 35.0% | |
| CCAGTTGAAACAAAATTCAC+AGG | + | chr8.3:78184017-78184036 | None:intergenic | 35.0% | |
| CTGTATTTGATTCTGATAGC+TGG | - | chr8.3:78185635-78185654 | MS.gene45648:CDS | 35.0% | |
| CTTGGATTTAACGAATCGAA+GGG | - | chr8.3:78184506-78184525 | MS.gene45648:CDS | 35.0% | |
| GAAATTCGAGAGTCATACAA+AGG | - | chr8.3:78184370-78184389 | MS.gene45648:CDS | 35.0% | |
| GAATCAAATACAGTCTTCCA+AGG | + | chr8.3:78185628-78185647 | None:intergenic | 35.0% | |
| GAGTATCTGGTATCAATACT+TGG | - | chr8.3:78185311-78185330 | MS.gene45648:CDS | 35.0% | |
| GATCAAGAGATGGAGAATTT+CGG | - | chr8.3:78183795-78183814 | MS.gene45648:CDS | 35.0% | |
| GGAGAAGATAAGCTATATCA+GGG | - | chr8.3:78186023-78186042 | MS.gene45648:CDS | 35.0% | |
| GGTCATCAAATATATGGGTT+TGG | - | chr8.3:78186228-78186247 | MS.gene45648:CDS | 35.0% | |
| GTCATCACCTTATACTCAAT+TGG | - | chr8.3:78185261-78185280 | MS.gene45648:CDS | 35.0% | |
| TAGAGATTTGAGGAAAGAGA+GGG | - | chr8.3:78184877-78184896 | MS.gene45648:CDS | 35.0% | |
| TATAGATGAGGATCAAGAGA+TGG | - | chr8.3:78183785-78183804 | MS.gene45648:CDS | 35.0% | |
| TATCAGAATGTTCCAAGGAT+GGG | - | chr8.3:78185147-78185166 | MS.gene45648:CDS | 35.0% | |
| TCTATCAATCTCTTGGATGT+TGG | + | chr8.3:78184861-78184880 | None:intergenic | 35.0% | |
| TCTTGGATTTAACGAATCGA+AGG | - | chr8.3:78184505-78184524 | MS.gene45648:CDS | 35.0% | |
| TGAAAAGATAATGAGTGTGC+TGG | - | chr8.3:78184979-78184998 | MS.gene45648:CDS | 35.0% | |
| TTACAAAATGGTATTTGGGC+TGG | - | chr8.3:78185881-78185900 | MS.gene45648:CDS | 35.0% | |
| TTATCAGAATGTTCCAAGGA+TGG | - | chr8.3:78185146-78185165 | MS.gene45648:CDS | 35.0% | |
| ! | AAATTTTTGCCTACTGCGTT+TGG | - | chr8.3:78184233-78184252 | MS.gene45648:CDS | 35.0% |
| ! | AATTTTTGCCTACTGCGTTT+GGG | - | chr8.3:78184234-78184253 | MS.gene45648:CDS | 35.0% |
| ! | AGCGAAGAAAAGATTTTGGA+AGG | - | chr8.3:78183973-78183992 | MS.gene45648:CDS | 35.0% |
| ! | GGAAAAGTATGTAACTGCTA+AGG | - | chr8.3:78184649-78184668 | MS.gene45648:CDS | 35.0% |
| ! | TCAGCTTTGGTACGATAAAA+CGG | + | chr8.3:78185675-78185694 | None:intergenic | 35.0% |
| ! | TCTGGTTTAGGATTTAATGC+TGG | - | chr8.3:78184149-78184168 | MS.gene45648:CDS | 35.0% |
| ! | TGGAAATTTTATGCCCGATA+AGG | - | chr8.3:78184034-78184053 | MS.gene45648:CDS | 35.0% |
| ! | TTTGTCTGATTTGAATGCTG+AGG | - | chr8.3:78184760-78184779 | MS.gene45648:CDS | 35.0% |
| ! | TTTTATCGTACCAAAGCTGA+AGG | - | chr8.3:78185675-78185694 | MS.gene45648:CDS | 35.0% |
| !! | CCTGTGAATTTTGTTTCAAC+TGG | - | chr8.3:78184014-78184033 | MS.gene45648:CDS | 35.0% |
| !! | CTTGAGAAGATGGGTTATAA+AGG | - | chr8.3:78184410-78184429 | MS.gene45648:CDS | 35.0% |
| !! | GGGTATTTTGAATCCTATTG+AGG | - | chr8.3:78184457-78184476 | MS.gene45648:CDS | 35.0% |
| !! | TGAGAAGATGGGTTATAAAG+GGG | - | chr8.3:78184412-78184431 | MS.gene45648:CDS | 35.0% |
| AAAGGTCTATGCCCAAAATG+AGG | - | chr8.3:78186284-78186303 | MS.gene45648:CDS | 40.0% | |
| AAATCTGGTAGAACGCACAA+CGG | - | chr8.3:78186207-78186226 | MS.gene45648:CDS | 40.0% | |
| AAGAAGATAGGCCTGGTTTA+GGG | - | chr8.3:78184096-78184115 | MS.gene45648:CDS | 40.0% | |
| AATGAAGCTGCTTGAGAAGA+TGG | - | chr8.3:78184400-78184419 | MS.gene45648:CDS | 40.0% | |
| AGACTATTCCTATCCACACA+TGG | - | chr8.3:78185476-78185495 | MS.gene45648:CDS | 40.0% | |
| AGAGATGGAGAATTTCGGAA+CGG | - | chr8.3:78183800-78183819 | MS.gene45648:CDS | 40.0% | |
| AGGGCTAAAAATTCTGGTCT+TGG | - | chr8.3:78184488-78184507 | MS.gene45648:CDS | 40.0% | |
| ATACAAAACCGTAAGCCACT+TGG | + | chr8.3:78185827-78185846 | None:intergenic | 40.0% | |
| ATATCAGGGTAAGTGAGCAA+AGG | - | chr8.3:78186037-78186056 | MS.gene45648:CDS | 40.0% | |
| ATCCTATTGAGGCAAAGTTG+AGG | - | chr8.3:78184468-78184487 | MS.gene45648:CDS | 40.0% | |
| ATGAAGCTGCTTGAGAAGAT+GGG | - | chr8.3:78184401-78184420 | MS.gene45648:CDS | 40.0% | |
| ATTGGAGGAGAAGAAGAAGA+AGG | - | chr8.3:78184298-78184317 | MS.gene45648:CDS | 40.0% | |
| CATATGCAGAACCATCACTT+GGG | + | chr8.3:78185594-78185613 | None:intergenic | 40.0% | |
| CATATGCTATATTGTCCCCT+TGG | - | chr8.3:78185608-78185627 | MS.gene45648:CDS | 40.0% | |
| CCAAAACTATCAAGTGCAGT+GGG | - | chr8.3:78185433-78185452 | MS.gene45648:CDS | 40.0% | |
| CTTATCTTCTCCTTCAAACC+AGG | + | chr8.3:78186015-78186034 | None:intergenic | 40.0% | |
| CTTCTTCTCTGTCTGCAAAA+CGG | + | chr8.3:78184549-78184568 | None:intergenic | 40.0% | |
| GACTATTCCTATCCACACAT+GGG | - | chr8.3:78185477-78185496 | MS.gene45648:CDS | 40.0% | |
| GAGAGTCATACAAAGGGAAT+TGG | - | chr8.3:78184377-78184396 | MS.gene45648:CDS | 40.0% | |
| GAGCGTGAAAGATCTTATTG+AGG | - | chr8.3:78186149-78186168 | MS.gene45648:CDS | 40.0% | |
| GGCTATTCCAATTCATCTGA+TGG | - | chr8.3:78185777-78185796 | MS.gene45648:CDS | 40.0% | |
| GTATCAATACTTGGCATGCA+CGG | - | chr8.3:78185320-78185339 | MS.gene45648:CDS | 40.0% | |
| GTGTCAACCATCAGATGAAT+TGG | + | chr8.3:78185787-78185806 | None:intergenic | 40.0% | |
| TAAGCAAGAAGAAGAGTCAG+AGG | - | chr8.3:78184685-78184704 | MS.gene45648:CDS | 40.0% | |
| TATACTGAAGCTCAGGCATT+GGG | + | chr8.3:78184808-78184827 | None:intergenic | 40.0% | |
| TATCAATACTTGGCATGCAC+GGG | - | chr8.3:78185321-78185340 | MS.gene45648:CDS | 40.0% | |
| TCATCTGATGGTTGACACAA+TGG | - | chr8.3:78185789-78185808 | MS.gene45648:CDS | 40.0% | |
| TCCTATTGAGGCAAAGTTGA+GGG | - | chr8.3:78184469-78184488 | MS.gene45648:CDS | 40.0% | |
| TCGAAATCCATCTCATGGTT+TGG | - | chr8.3:78185177-78185196 | MS.gene45648:CDS | 40.0% | |
| TCTGTTAAAACTCGTACCTG+CGG | + | chr8.3:78184740-78184759 | None:intergenic | 40.0% | |
| TCTTATTGAGGCTTATGCTC+GGG | - | chr8.3:78186161-78186180 | MS.gene45648:CDS | 40.0% | |
| TGCGTTTGGGAAGATGATTA+AGG | - | chr8.3:78184247-78184266 | MS.gene45648:CDS | 40.0% | |
| TGTAACTGCTAAGGAGTTGT+TGG | - | chr8.3:78184658-78184677 | MS.gene45648:CDS | 40.0% | |
| TTAGGATTTAATGCTGGTCG+TGG | - | chr8.3:78184155-78184174 | MS.gene45648:CDS | 40.0% | |
| TTATACTGAAGCTCAGGCAT+TGG | + | chr8.3:78184809-78184828 | None:intergenic | 40.0% | |
| TTCCCTTGCTCAATGCTTTA+CGG | - | chr8.3:78185045-78185064 | MS.gene45648:CDS | 40.0% | |
| TTCTTCTCTGTCTGCAAAAC+GGG | + | chr8.3:78184548-78184567 | None:intergenic | 40.0% | |
| TTGGAGGAGAAGAAGAAGAA+GGG | - | chr8.3:78184299-78184318 | MS.gene45648:CDS | 40.0% | |
| TTGTGCGTTCTACCAGATTT+AGG | + | chr8.3:78186207-78186226 | None:intergenic | 40.0% | |
| ! | AAGACCATGTCTCCTCATTT+TGG | + | chr8.3:78186299-78186318 | None:intergenic | 40.0% |
| ! | AGACCATGTCTCCTCATTTT+GGG | + | chr8.3:78186298-78186317 | None:intergenic | 40.0% |
| ! | AGGATGATGGTGAAGAAGAT+AGG | - | chr8.3:78184084-78184103 | MS.gene45648:CDS | 40.0% |
| ! | GGAACGGAGAAAGATTTTGA+AGG | - | chr8.3:78183816-78183835 | MS.gene45648:CDS | 40.0% |
| ! | TGAACCAATGCTACGGTTTT+TGG | - | chr8.3:78185348-78185367 | MS.gene45648:CDS | 40.0% |
| ! | TGATCAAGATTCTGACTTGC+CGG | + | chr8.3:78185730-78185749 | None:intergenic | 40.0% |
| ! | TGGTCTTGATATGATGAACC+AGG | - | chr8.3:78185963-78185982 | MS.gene45648:CDS | 40.0% |
| ! | TTTGAGTTCGAGCTTTCTCT+CGG | + | chr8.3:78183881-78183900 | None:intergenic | 40.0% |
| !! | AAAAACCGTAGCATTGGTTC+AGG | + | chr8.3:78185349-78185368 | None:intergenic | 40.0% |
| !! | AAGATTTTGAAGGTGGCCAA+TGG | - | chr8.3:78183826-78183845 | MS.gene45648:CDS | 40.0% |
| !! | ACGGAGAAAGATTTTGAAGG+TGG | - | chr8.3:78183819-78183838 | MS.gene45648:CDS | 40.0% |
| !! | AGATTTTGAAGGTGGCCAAT+GGG | - | chr8.3:78183827-78183846 | MS.gene45648:CDS | 40.0% |
| !! | CATGCACAAAAGATTTGCTG+AGG | - | chr8.3:78185069-78185088 | MS.gene45648:CDS | 40.0% |
| !! | CTGGTTTAGGGTTAGGTTTT+GGG | - | chr8.3:78184108-78184127 | MS.gene45648:CDS | 40.0% |
| !! | GAGAAGATGGGTTATAAAGG+GGG | - | chr8.3:78184413-78184432 | MS.gene45648:CDS | 40.0% |
| !!! | TTTAGGGTTAGGTTTTGGGT+CGG | - | chr8.3:78184112-78184131 | MS.gene45648:CDS | 40.0% |
| AAAGGAGAAGTTGGAAGCTG+AGG | - | chr8.3:78184925-78184944 | MS.gene45648:CDS | 45.0% | |
| ACAGAGAAGAAGACTGAACC+GGG | - | chr8.3:78184557-78184576 | MS.gene45648:CDS | 45.0% | |
| ACCAACTCCAAACCATGAGA+TGG | + | chr8.3:78185187-78185206 | None:intergenic | 45.0% | |
| AGATGACTTCCAAGTGAACC+CGG | - | chr8.3:78185708-78185727 | MS.gene45648:CDS | 45.0% | |
| ATACCAGATACTCTGACAGC+TGG | + | chr8.3:78185304-78185323 | None:intergenic | 45.0% | |
| ATCAAGTGCAGTGGGTACTT+GGG | - | chr8.3:78185441-78185460 | MS.gene45648:CDS | 45.0% | |
| ATCATCTTCCCAAACGCAGT+AGG | + | chr8.3:78184245-78184264 | None:intergenic | 45.0% | |
| ATGATGAACCAGGCTGTTGA+AGG | - | chr8.3:78185973-78185992 | MS.gene45648:CDS | 45.0% | |
| ATGCCCAAAATGAGGAGACA+TGG | - | chr8.3:78186292-78186311 | MS.gene45648:CDS | 45.0% | |
| CAGTTGGAAGAACACGTTCA+TGG | - | chr8.3:78184594-78184613 | MS.gene45648:CDS | 45.0% | |
| CCAAAACCTAACCCTAAACC+AGG | + | chr8.3:78184110-78184129 | None:intergenic | 45.0% | |
| CCATCATCATCGTAGTCTTC+GGG | + | chr8.3:78183939-78183958 | None:intergenic | 45.0% | |
| CCCATCATCATCGTAGTCTT+CGG | + | chr8.3:78183940-78183959 | None:intergenic | 45.0% | |
| CCGAAGACTACGATGATGAT+GGG | - | chr8.3:78183937-78183956 | MS.gene45648:CDS | 45.0% | |
| CCTCTTCGAAATCCATCTCA+TGG | - | chr8.3:78185172-78185191 | MS.gene45648:CDS | 45.0% | |
| CTTCTTTGCCAAGTGGCTTA+CGG | - | chr8.3:78185816-78185835 | MS.gene45648:CDS | 45.0% | |
| GAACGTGTTCTTCCAACTGT+AGG | + | chr8.3:78184593-78184612 | None:intergenic | 45.0% | |
| GAAGAAGATAGGCCTGGTTT+AGG | - | chr8.3:78184095-78184114 | MS.gene45648:CDS | 45.0% | |
| GAATGCTGAGGAGAAAGCAA+AGG | - | chr8.3:78184772-78184791 | MS.gene45648:CDS | 45.0% | |
| GACAGAGAAGAAGACTGAAC+CGG | - | chr8.3:78184556-78184575 | MS.gene45648:CDS | 45.0% | |
| GACTCCAAAAACCGTAGCAT+TGG | + | chr8.3:78185355-78185374 | None:intergenic | 45.0% | |
| GCATATGCAGAACCATCACT+TGG | + | chr8.3:78185595-78185614 | None:intergenic | 45.0% | |
| GCCAAAACTATCAAGTGCAG+TGG | - | chr8.3:78185432-78185451 | MS.gene45648:CDS | 45.0% | |
| GCTACGTTATACTGAAGCTC+AGG | + | chr8.3:78184815-78184834 | None:intergenic | 45.0% | |
| GTTATAAAGGGGGTGGTCTT+GGG | - | chr8.3:78184423-78184442 | MS.gene45648:CDS | 45.0% | |
| GTTGGAGAAGAGAACACCTT+AGG | - | chr8.3:78185007-78185026 | MS.gene45648:CDS | 45.0% | |
| TAAGGAGAGAGCCATGAAGA+GGG | - | chr8.3:78184265-78184284 | MS.gene45648:CDS | 45.0% | |
| TATCAAGTGCAGTGGGTACT+TGG | - | chr8.3:78185440-78185459 | MS.gene45648:CDS | 45.0% | |
| TGGAGATCTTCTTTGCCAAG+TGG | - | chr8.3:78185809-78185828 | MS.gene45648:CDS | 45.0% | |
| TGGAGGAGAAGAAGAAGAAG+GGG | - | chr8.3:78184300-78184319 | MS.gene45648:CDS | 45.0% | |
| TTAAGGAGAGAGCCATGAAG+AGG | - | chr8.3:78184264-78184283 | MS.gene45648:CDS | 45.0% | |
| TTGGGTTATGAACTGGGCTT+CGG | - | chr8.3:78185756-78185775 | MS.gene45648:CDS | 45.0% | |
| ! | CCATGAGATGGATTTCGAAG+AGG | + | chr8.3:78185175-78185194 | None:intergenic | 45.0% |
| ! | GATCAAGATTCTGACTTGCC+GGG | + | chr8.3:78185729-78185748 | None:intergenic | 45.0% |
| ! | TCCATCTCATGGTTTGGAGT+TGG | - | chr8.3:78185183-78185202 | MS.gene45648:CDS | 45.0% |
| ! | TGAGTACTGTTCTTGGTGCA+TGG | - | chr8.3:78185566-78185585 | MS.gene45648:CDS | 45.0% |
| !! | AAGATGGGTTATAAAGGGGG+TGG | - | chr8.3:78184416-78184435 | MS.gene45648:CDS | 45.0% |
| !! | CCCACTGCACTTGATAGTTT+TGG | + | chr8.3:78185436-78185455 | None:intergenic | 45.0% |
| !! | CCTGGTTTAGGGTTAGGTTT+TGG | - | chr8.3:78184107-78184126 | MS.gene45648:CDS | 45.0% |
| !! | GGCTTACGGTTTTGTATCGT+TGG | - | chr8.3:78185830-78185849 | MS.gene45648:CDS | 45.0% |
| !! | GTCCGTAAAGCATTGAGCAA+GGG | + | chr8.3:78185050-78185069 | None:intergenic | 45.0% |
| !! | GTTTGGAGTTGGTATCACAG+TGG | - | chr8.3:78185194-78185213 | MS.gene45648:CDS | 45.0% |
| !! | TGTCCGTAAAGCATTGAGCA+AGG | + | chr8.3:78185051-78185070 | None:intergenic | 45.0% |
| !! | TTTTGGGTCGGCTAGTATCT+CGG | - | chr8.3:78184124-78184143 | MS.gene45648:CDS | 45.0% |
| !!! | GCTACGGTTTTTGGAGTCTT+GGG | - | chr8.3:78185357-78185376 | MS.gene45648:CDS | 45.0% |
| !!! | TGCTACGGTTTTTGGAGTCT+TGG | - | chr8.3:78185356-78185375 | MS.gene45648:CDS | 45.0% |
| AAGAAGAAGGGGAAGAAGCC+GGG | - | chr8.3:78184311-78184330 | MS.gene45648:CDS | 50.0% | |
| AATGCTGGTCGTGGTGTGAA+TGG | - | chr8.3:78184164-78184183 | MS.gene45648:CDS | 50.0% | |
| ACAACAAGCTGCTGCAAGCA+TGG | - | chr8.3:78186098-78186117 | MS.gene45648:CDS | 50.0% | |
| AGAGAAGAAGACTGAACCGG+GGG | - | chr8.3:78184559-78184578 | MS.gene45648:CDS | 50.0% | |
| ATGAGTGTGCTGGACAGAGT+TGG | - | chr8.3:78184989-78185008 | MS.gene45648:CDS | 50.0% | |
| CAGAGAAGAAGACTGAACCG+GGG | - | chr8.3:78184558-78184577 | MS.gene45648:CDS | 50.0% | |
| CCCGAAGACTACGATGATGA+TGG | - | chr8.3:78183936-78183955 | MS.gene45648:CDS | 50.0% | |
| GAACCAGGCTGTTGAAGGTA+TGG | - | chr8.3:78185978-78185997 | MS.gene45648:CDS | 50.0% | |
| GAAGAAGAAGGGGAAGAAGC+CGG | - | chr8.3:78184310-78184329 | MS.gene45648:CDS | 50.0% | |
| GAAGAGGGAGAAGGAGAGAT+TGG | - | chr8.3:78184280-78184299 | MS.gene45648:CDS | 50.0% | |
| GAGGCTTATGCTCGGGATAA+TGG | - | chr8.3:78186168-78186187 | MS.gene45648:CDS | 50.0% | |
| GATGGTGAAGAAGATAGGCC+TGG | - | chr8.3:78184089-78184108 | MS.gene45648:CDS | 50.0% | |
| GCCCTCAACTTTGCCTCAAT+AGG | + | chr8.3:78184473-78184492 | None:intergenic | 50.0% | |
| GGGATCCTGAACCAATGCTA+CGG | - | chr8.3:78185341-78185360 | MS.gene45648:CDS | 50.0% | |
| GGTCTTGGGAAGAATGAGCA+GGG | - | chr8.3:78184437-78184456 | MS.gene45648:CDS | 50.0% | |
| GGTTATAAAGGGGGTGGTCT+TGG | - | chr8.3:78184422-78184441 | MS.gene45648:CDS | 50.0% | |
| TCCTGACCTAAACCAATGCC+CGG | + | chr8.3:78184332-78184351 | None:intergenic | 50.0% | |
| TCTCTCCTTCTCCCTCTTCA+TGG | + | chr8.3:78184279-78184298 | None:intergenic | 50.0% | |
| TCTGTCTGCAAAACGGGCAA+CGG | + | chr8.3:78184542-78184561 | None:intergenic | 50.0% | |
| TGCAAGACAGCCTTCAGCTT+TGG | + | chr8.3:78185688-78185707 | None:intergenic | 50.0% | |
| TTCGAAGAGGATCCCATCCT+TGG | + | chr8.3:78185162-78185181 | None:intergenic | 50.0% | |
| TTTGGGTCGGCTAGTATCTC+GGG | - | chr8.3:78184125-78184144 | MS.gene45648:CDS | 50.0% | |
| ! | AGTATCTCGGGGTCTGGTTT+AGG | - | chr8.3:78184137-78184156 | MS.gene45648:CDS | 50.0% |
| ! | GATAGGCCTGGTTTAGGGTT+AGG | - | chr8.3:78184101-78184120 | MS.gene45648:CDS | 50.0% |
| ! | GGTTGTGCAACCTGGTTTGA+AGG | - | chr8.3:78186002-78186021 | MS.gene45648:CDS | 50.0% |
| ! | TGGTCTTGGGAAGAATGAGC+AGG | - | chr8.3:78184436-78184455 | MS.gene45648:CDS | 50.0% |
| ! | TTGCCAGCTGTCAGAGTATC+TGG | - | chr8.3:78185298-78185317 | MS.gene45648:CDS | 50.0% |
| !! | AAGAAGCCGGGCATTGGTTT+AGG | - | chr8.3:78184323-78184342 | MS.gene45648:CDS | 50.0% |
| !! | AGCAGCTTGTTGTTGAGCAG+AGG | + | chr8.3:78186091-78186110 | None:intergenic | 50.0% |
| !! | CAGTGGAAGGCATTGCTTCA+AGG | - | chr8.3:78185211-78185230 | MS.gene45648:CDS | 50.0% |
| !! | GAAGGTGGCCAATGGGTTAA+TGG | - | chr8.3:78183834-78183853 | MS.gene45648:CDS | 50.0% |
| !! | GGAGTTGGTATCACAGTGGA+AGG | - | chr8.3:78185198-78185217 | MS.gene45648:CDS | 50.0% |
| !! | GGCATTGGTTTAGGTCAGGA+GGG | - | chr8.3:78184332-78184351 | MS.gene45648:CDS | 50.0% |
| AGGAGGGAGCTGTGGATGTT+GGG | - | chr8.3:78184348-78184367 | MS.gene45648:CDS | 55.0% | |
| ATCCATGGCTACCCCTGCTA+GGG | - | chr8.3:78185503-78185522 | MS.gene45648:CDS | 55.0% | |
| CAAAACGGGCAACGGCATAG+TGG | + | chr8.3:78184534-78184553 | None:intergenic | 55.0% | |
| CCTCCATACCTTCAACAGCC+TGG | + | chr8.3:78185984-78186003 | None:intergenic | 55.0% | |
| GAGAGCCATGAAGAGGGAGA+AGG | - | chr8.3:78184271-78184290 | MS.gene45648:CDS | 55.0% | |
| GAGGGAGAAGGAGAGATTGG+AGG | - | chr8.3:78184283-78184302 | MS.gene45648:CDS | 55.0% | |
| GGATGCACCCATGTGTGGAT+AGG | + | chr8.3:78185487-78185506 | None:intergenic | 55.0% | |
| GGTATGGAGGTTGTGCAACC+TGG | - | chr8.3:78185994-78186013 | MS.gene45648:CDS | 55.0% | |
| TCCACACATGGGTGCATCCA+TGG | - | chr8.3:78185488-78185507 | MS.gene45648:CDS | 55.0% | |
| TTATGATATGAGGGGGCCGC+AGG | - | chr8.3:78184721-78184740 | MS.gene45648:CDS | 55.0% | |
| TTGGGTCGGCTAGTATCTCG+GGG | - | chr8.3:78184126-78184145 | MS.gene45648:CDS | 55.0% | |
| TTTAGGTCAGGAGGGAGCTG+TGG | - | chr8.3:78184340-78184359 | MS.gene45648:CDS | 55.0% | |
| ! | CCAGGCTGTTGAAGGTATGG+AGG | - | chr8.3:78185981-78186000 | MS.gene45648:CDS | 55.0% |
| ! | TCTGACTTGCCGGGTTCACT+TGG | + | chr8.3:78185720-78185739 | None:intergenic | 55.0% |
| !! | GGGCATTGGTTTAGGTCAGG+AGG | - | chr8.3:78184331-78184350 | MS.gene45648:CDS | 55.0% |
| AAGGGGAAGAAGCCGGGCAT+TGG | - | chr8.3:78184317-78184336 | MS.gene45648:CDS | 60.0% | |
| ACTGTAGGCTGCACAACCCC+CGG | + | chr8.3:78184578-78184597 | None:intergenic | 60.0% | |
| CAAGCTGCTGCAAGCATGGC+TGG | - | chr8.3:78186102-78186121 | MS.gene45648:CDS | 60.0% | |
| CAGGAGGGAGCTGTGGATGT+TGG | - | chr8.3:78184347-78184366 | MS.gene45648:CDS | 60.0% | |
| CATCCATGGCTACCCCTGCT+AGG | - | chr8.3:78185502-78185521 | MS.gene45648:CDS | 60.0% | |
| CTCCAGCTTGTGCCCTAGCA+GGG | + | chr8.3:78185518-78185537 | None:intergenic | 60.0% | |
| GCCATGGATGCACCCATGTG+TGG | + | chr8.3:78185492-78185511 | None:intergenic | 60.0% | |
| GGGGTTGTGCAGCCTACAGT+TGG | - | chr8.3:78184578-78184597 | MS.gene45648:CDS | 60.0% | |
| GGTGCATGGCACCCAAGTGA+TGG | - | chr8.3:78185580-78185599 | MS.gene45648:CDS | 60.0% | |
| TCCAGCTTGTGCCCTAGCAG+GGG | + | chr8.3:78185517-78185536 | None:intergenic | 60.0% | |
| TCGGCTAGTATCTCGGGGTC+TGG | - | chr8.3:78184131-78184150 | MS.gene45648:CDS | 60.0% | |
| !! | GCCGGGCATTGGTTTAGGTC+AGG | - | chr8.3:78184328-78184347 | MS.gene45648:CDS | 60.0% |
| ACCCCTGCTAGGGCACAAGC+TGG | - | chr8.3:78185513-78185532 | MS.gene45648:CDS | 65.0% | |
| CCTCCAGCTTGTGCCCTAGC+AGG | + | chr8.3:78185519-78185538 | None:intergenic | 65.0% | |
| CCTGCTAGGGCACAAGCTGG+AGG | - | chr8.3:78185516-78185535 | MS.gene45648:CDS | 65.0% | |
| GCTGCTGCAAGCATGGCTGG+TGG | - | chr8.3:78186105-78186124 | MS.gene45648:CDS | 65.0% | |
| TGCCCTAGCAGGGGTAGCCA+TGG | + | chr8.3:78185508-78185527 | None:intergenic | 65.0% | |
| ! | AGCATGGCTGGTGGCGCAGA+TGG | - | chr8.3:78186114-78186133 | MS.gene45648:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 78183780 | 78186377 | 78183780 | ID=MS.gene45648 |
| chr8.3 | mRNA | 78183780 | 78186377 | 78183780 | ID=MS.gene45648.t1;Parent=MS.gene45648 |
| chr8.3 | exon | 78183780 | 78186377 | 78183780 | ID=MS.gene45648.t1.exon1;Parent=MS.gene45648.t1 |
| chr8.3 | CDS | 78183780 | 78186377 | 78183780 | ID=cds.MS.gene45648.t1;Parent=MS.gene45648.t1 |
| Gene Sequence |
| Protein sequence |
