Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47491.t1 | XP_003608033.1 | 94.2 | 360 | 21 | 0 | 1 | 360 | 1 | 360 | 9.30E-194 | 686 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47491.t1 | Q9C566 | 74.2 | 360 | 93 | 0 | 1 | 360 | 1 | 360 | 6.0e-157 | 555.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47491.t1 | G7JMH6 | 94.2 | 360 | 21 | 0 | 1 | 360 | 1 | 360 | 6.7e-194 | 686.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47491 | MS.gene30654 | PPI |
| MS.gene47491 | MS.gene20834 | PPI |
| MS.gene47491 | MS.gene040499 | PPI |
| MS.gene20783 | MS.gene47491 | PPI |
| MS.gene47491 | MS.gene62607 | PPI |
| MS.gene47491 | MS.gene60613 | PPI |
| MS.gene47491 | MS.gene061126 | PPI |
| MS.gene47491 | MS.gene07262 | PPI |
| MS.gene47491 | MS.gene49154 | PPI |
| MS.gene47491 | MS.gene006231 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47491.t1 | MTR_4g086760 | 97.230 | 361 | 10 | 0 | 1 | 361 | 1 | 361 | 0.0 | 727 |
| MS.gene47491.t1 | MTR_4g086760 | 96.988 | 332 | 10 | 0 | 1 | 332 | 1 | 332 | 0.0 | 671 |
| MS.gene47491.t1 | MTR_4g086760 | 95.223 | 314 | 15 | 0 | 1 | 314 | 1 | 314 | 0.0 | 625 |
| MS.gene47491.t1 | MTR_8g079690 | 74.238 | 361 | 92 | 1 | 1 | 361 | 1 | 360 | 0.0 | 570 |
| MS.gene47491.t1 | MTR_7g095750 | 63.905 | 169 | 58 | 3 | 6 | 173 | 9 | 175 | 6.97e-70 | 231 |
| MS.gene47491.t1 | MTR_4g075290 | 58.286 | 175 | 67 | 3 | 1 | 173 | 1 | 171 | 3.34e-65 | 204 |
| MS.gene47491.t1 | MTR_7g116340 | 59.538 | 173 | 68 | 2 | 1 | 173 | 1 | 171 | 5.37e-65 | 204 |
| MS.gene47491.t1 | MTR_3g117750 | 58.382 | 173 | 66 | 3 | 5 | 175 | 13 | 181 | 3.16e-64 | 202 |
| MS.gene47491.t1 | MTR_3g463900 | 57.895 | 171 | 68 | 3 | 5 | 174 | 35 | 202 | 3.68e-62 | 198 |
| MS.gene47491.t1 | MTR_7g110980 | 55.556 | 171 | 68 | 1 | 4 | 174 | 96 | 258 | 1.66e-60 | 196 |
| MS.gene47491.t1 | MTR_4g073650 | 56.571 | 175 | 75 | 1 | 5 | 179 | 47 | 220 | 3.77e-60 | 193 |
| MS.gene47491.t1 | MTR_3g070500 | 57.059 | 170 | 69 | 3 | 5 | 173 | 65 | 231 | 1.40e-59 | 192 |
| MS.gene47491.t1 | MTR_1g085560 | 56.395 | 172 | 66 | 2 | 4 | 174 | 85 | 248 | 2.29e-59 | 192 |
| MS.gene47491.t1 | MTR_1g117010 | 54.335 | 173 | 68 | 2 | 5 | 174 | 78 | 242 | 9.59e-58 | 188 |
| MS.gene47491.t1 | MTR_1g117010 | 54.335 | 173 | 68 | 2 | 5 | 174 | 78 | 242 | 9.59e-58 | 188 |
| MS.gene47491.t1 | MTR_8g040180 | 55.357 | 168 | 71 | 2 | 7 | 173 | 21 | 185 | 1.08e-57 | 186 |
| MS.gene47491.t1 | MTR_3g107660 | 50.820 | 183 | 87 | 2 | 6 | 188 | 12 | 191 | 8.02e-51 | 182 |
| MS.gene47491.t1 | MTR_1g011980 | 52.096 | 167 | 78 | 2 | 6 | 172 | 9 | 173 | 3.64e-49 | 176 |
| MS.gene47491.t1 | MTR_3g070500 | 58.871 | 124 | 50 | 1 | 5 | 128 | 65 | 187 | 1.53e-46 | 157 |
| MS.gene47491.t1 | MTR_8g036015 | 48.344 | 151 | 65 | 3 | 18 | 167 | 10 | 148 | 7.43e-39 | 136 |
| MS.gene47491.t1 | MTR_2g085075 | 48.701 | 154 | 66 | 3 | 18 | 170 | 471 | 612 | 1.33e-37 | 142 |
| MS.gene47491.t1 | MTR_7g105220 | 47.368 | 152 | 67 | 4 | 18 | 168 | 19 | 158 | 3.10e-37 | 132 |
| MS.gene47491.t1 | MTR_3g070500 | 58.333 | 96 | 39 | 1 | 5 | 100 | 65 | 159 | 1.75e-33 | 122 |
| MS.gene47491.t1 | MTR_3g070500 | 57.000 | 100 | 42 | 1 | 5 | 104 | 65 | 163 | 2.70e-33 | 122 |
| MS.gene47491.t1 | MTR_5g015500 | 43.791 | 153 | 73 | 4 | 17 | 168 | 313 | 453 | 2.32e-32 | 127 |
| MS.gene47491.t1 | MTR_5g015500 | 43.791 | 153 | 73 | 4 | 17 | 168 | 353 | 493 | 3.18e-32 | 127 |
| MS.gene47491.t1 | MTR_3g085705 | 45.833 | 96 | 48 | 2 | 56 | 151 | 24 | 115 | 9.51e-20 | 84.3 |
| MS.gene47491.t1 | MTR_2g023120 | 35.870 | 184 | 95 | 6 | 18 | 190 | 22 | 193 | 1.06e-18 | 87.8 |
| MS.gene47491.t1 | MTR_1g094065 | 36.129 | 155 | 80 | 7 | 17 | 170 | 88 | 224 | 1.35e-16 | 78.6 |
| MS.gene47491.t1 | MTR_6g084140 | 30.189 | 159 | 90 | 4 | 18 | 167 | 27 | 173 | 1.81e-16 | 81.3 |
| MS.gene47491.t1 | MTR_6g084140 | 30.189 | 159 | 90 | 4 | 18 | 167 | 10 | 156 | 1.95e-16 | 80.9 |
| MS.gene47491.t1 | MTR_8g442420 | 29.560 | 159 | 91 | 4 | 18 | 167 | 10 | 156 | 2.83e-15 | 77.4 |
| MS.gene47491.t1 | MTR_8g012340 | 33.566 | 143 | 92 | 2 | 219 | 361 | 409 | 548 | 1.15e-14 | 75.5 |
| MS.gene47491.t1 | MTR_1g035360 | 32.468 | 154 | 88 | 4 | 17 | 170 | 87 | 224 | 1.92e-14 | 72.4 |
| MS.gene47491.t1 | MTR_8g080980 | 30.435 | 161 | 103 | 3 | 207 | 361 | 387 | 544 | 7.63e-13 | 70.1 |
| MS.gene47491.t1 | MTR_7g053470 | 33.113 | 151 | 84 | 5 | 219 | 362 | 401 | 541 | 2.73e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47491.t1 | AT2G15790 | 77.500 | 360 | 81 | 0 | 1 | 360 | 1 | 360 | 0.0 | 593 |
| MS.gene47491.t1 | AT3G63400 | 64.706 | 170 | 59 | 1 | 6 | 175 | 9 | 177 | 2.70e-73 | 233 |
| MS.gene47491.t1 | AT3G63400 | 65.476 | 168 | 57 | 1 | 6 | 173 | 9 | 175 | 1.17e-71 | 233 |
| MS.gene47491.t1 | AT3G63400 | 65.476 | 168 | 57 | 1 | 6 | 173 | 9 | 175 | 1.17e-71 | 233 |
| MS.gene47491.t1 | AT3G63400 | 65.476 | 168 | 57 | 1 | 6 | 173 | 9 | 175 | 1.17e-71 | 233 |
| MS.gene47491.t1 | AT2G21130 | 60.947 | 169 | 64 | 2 | 5 | 173 | 6 | 172 | 1.82e-67 | 210 |
| MS.gene47491.t1 | AT4G38740 | 58.960 | 173 | 69 | 2 | 1 | 173 | 1 | 171 | 8.36e-67 | 209 |
| MS.gene47491.t1 | AT3G56070 | 60.116 | 173 | 67 | 2 | 1 | 173 | 1 | 171 | 2.22e-66 | 207 |
| MS.gene47491.t1 | AT3G56070 | 60.116 | 173 | 67 | 2 | 1 | 173 | 1 | 171 | 2.22e-66 | 207 |
| MS.gene47491.t1 | AT4G34870 | 59.538 | 173 | 68 | 2 | 1 | 173 | 1 | 171 | 2.17e-65 | 205 |
| MS.gene47491.t1 | AT2G16600 | 59.649 | 171 | 63 | 3 | 5 | 173 | 6 | 172 | 2.27e-65 | 205 |
| MS.gene47491.t1 | AT3G55920 | 60.000 | 170 | 64 | 3 | 5 | 173 | 60 | 226 | 2.63e-63 | 202 |
| MS.gene47491.t1 | AT3G62030 | 56.471 | 170 | 66 | 1 | 5 | 174 | 96 | 257 | 2.99e-61 | 197 |
| MS.gene47491.t1 | AT3G62030 | 56.471 | 170 | 66 | 1 | 5 | 174 | 95 | 256 | 3.37e-61 | 197 |
| MS.gene47491.t1 | AT2G29960 | 57.310 | 171 | 69 | 3 | 5 | 174 | 33 | 200 | 4.98e-61 | 195 |
| MS.gene47491.t1 | AT2G29960 | 57.310 | 171 | 69 | 3 | 5 | 174 | 33 | 200 | 4.98e-61 | 195 |
| MS.gene47491.t1 | AT5G13120 | 54.545 | 176 | 69 | 2 | 5 | 177 | 91 | 258 | 5.19e-61 | 197 |
| MS.gene47491.t1 | AT5G13120 | 54.545 | 176 | 69 | 2 | 5 | 177 | 87 | 254 | 6.49e-61 | 196 |
| MS.gene47491.t1 | AT3G62030 | 56.471 | 170 | 66 | 1 | 5 | 174 | 149 | 310 | 1.09e-60 | 198 |
| MS.gene47491.t1 | AT5G58710 | 57.310 | 171 | 69 | 3 | 5 | 174 | 36 | 203 | 6.34e-60 | 192 |
| MS.gene47491.t1 | AT4G34960 | 54.971 | 171 | 76 | 1 | 5 | 175 | 48 | 217 | 8.86e-59 | 190 |
| MS.gene47491.t1 | AT2G29960 | 54.971 | 171 | 63 | 4 | 5 | 174 | 33 | 190 | 8.29e-56 | 181 |
| MS.gene47491.t1 | AT2G38730 | 54.167 | 168 | 73 | 2 | 7 | 173 | 35 | 199 | 2.58e-53 | 175 |
| MS.gene47491.t1 | AT2G16600 | 52.632 | 171 | 53 | 3 | 5 | 173 | 6 | 150 | 1.32e-51 | 169 |
| MS.gene47491.t1 | AT4G34960 | 58.065 | 124 | 51 | 1 | 5 | 128 | 48 | 170 | 3.40e-46 | 155 |
| MS.gene47491.t1 | AT4G32420 | 48.810 | 168 | 83 | 2 | 6 | 172 | 9 | 174 | 4.36e-46 | 168 |
| MS.gene47491.t1 | AT4G32420 | 48.810 | 168 | 83 | 2 | 6 | 172 | 9 | 174 | 4.36e-46 | 168 |
| MS.gene47491.t1 | AT4G32420 | 48.810 | 168 | 83 | 2 | 6 | 172 | 9 | 174 | 4.36e-46 | 168 |
| MS.gene47491.t1 | AT4G32420 | 48.810 | 168 | 83 | 2 | 6 | 172 | 9 | 174 | 4.36e-46 | 168 |
| MS.gene47491.t1 | AT4G32420 | 48.052 | 154 | 78 | 1 | 6 | 159 | 9 | 160 | 4.82e-41 | 154 |
| MS.gene47491.t1 | AT1G01940 | 47.020 | 151 | 67 | 3 | 18 | 167 | 10 | 148 | 1.80e-38 | 135 |
| MS.gene47491.t1 | AT3G44600 | 50.000 | 154 | 64 | 3 | 18 | 170 | 485 | 626 | 1.90e-38 | 145 |
| MS.gene47491.t1 | AT2G36130 | 48.026 | 152 | 66 | 4 | 18 | 168 | 19 | 158 | 2.04e-37 | 132 |
| MS.gene47491.t1 | AT3G22920 | 43.182 | 176 | 88 | 6 | 1 | 173 | 1 | 167 | 1.94e-33 | 124 |
| MS.gene47491.t1 | AT5G67530 | 41.139 | 158 | 80 | 4 | 14 | 170 | 349 | 494 | 6.25e-33 | 129 |
| MS.gene47491.t1 | AT4G33060 | 37.838 | 148 | 77 | 5 | 18 | 162 | 22 | 157 | 3.78e-22 | 97.8 |
| MS.gene47491.t1 | AT1G53720 | 29.560 | 159 | 91 | 4 | 18 | 167 | 10 | 156 | 1.11e-17 | 83.6 |
| MS.gene47491.t1 | AT1G53720 | 29.560 | 159 | 91 | 4 | 18 | 167 | 10 | 156 | 1.17e-16 | 81.6 |
| MS.gene47491.t1 | AT3G25230 | 29.714 | 175 | 113 | 2 | 194 | 361 | 375 | 546 | 1.42e-14 | 75.5 |
| MS.gene47491.t1 | AT3G25230 | 29.714 | 175 | 113 | 2 | 194 | 361 | 375 | 546 | 1.51e-14 | 75.1 |
| MS.gene47491.t1 | AT2G47320 | 29.221 | 154 | 94 | 4 | 17 | 170 | 86 | 224 | 3.61e-13 | 68.9 |
| MS.gene47491.t1 | AT5G48570 | 29.371 | 143 | 98 | 1 | 219 | 361 | 417 | 556 | 2.51e-12 | 68.6 |
| MS.gene47491.t1 | AT1G58450 | 33.333 | 156 | 78 | 7 | 219 | 363 | 17 | 157 | 5.11e-11 | 61.2 |
Find 82 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTCATCGTATTGTTAA+AGG | 0.122276 | 4.3:+26124770 | MS.gene47491:CDS |
| GATGGTAAGCATGTTGTATT+TGG | 0.164027 | 4.3:+26124983 | MS.gene47491:CDS |
| CAGGCTTGTAAATTGAAAAT+AGG | 0.228821 | 4.3:+26125709 | MS.gene47491:intron |
| GTTGACTCAATCAAAGCTTT+TGG | 0.281914 | 4.3:+26125226 | MS.gene47491:CDS |
| AAAGGCATTGCTCCCAATAC+TGG | 0.290483 | 4.3:+26123370 | MS.gene47491:CDS |
| GCTTTATGTACTGGTGAAAA+AGG | 0.323112 | 4.3:+26123352 | MS.gene47491:CDS |
| GTATTTGGGAAAGTAGTTAA+AGG | 0.327975 | 4.3:+26124998 | MS.gene47491:CDS |
| AACTGAGAACCATTTGTATT+AGG | 0.329429 | 4.3:-26124929 | None:intergenic |
| AAGATTACAAAATGGCTCTA+AGG | 0.372932 | 4.3:+26125357 | MS.gene47491:CDS |
| ATGCCATCATCTTCTCCTTC+GGG | 0.380950 | 4.3:-26125112 | None:intergenic |
| GGGTTTGCAGAGAAAAGTTC+AGG | 0.381476 | 4.3:+26125548 | MS.gene47491:intron |
| TATGCCATCATCTTCTCCTT+CGG | 0.385372 | 4.3:-26125113 | None:intergenic |
| ACTGGAGGAGAATCTATATA+TGG | 0.394055 | 4.3:+26124833 | MS.gene47491:CDS |
| GGCAAGGTCTGCAGGCCAAT+CGG | 0.395413 | 4.3:-26125167 | None:intergenic |
| CCTTCTCCCAACAAATATCT+AGG | 0.395609 | 4.3:-26125403 | None:intergenic |
| TACGTTACCTAGATATTTGT+TGG | 0.398707 | 4.3:+26125396 | MS.gene47491:CDS |
| TTGAAAATAGGAGATGTTAA+AGG | 0.404212 | 4.3:+26125721 | MS.gene47491:CDS |
| CATAACAACTAACCATCATT+TGG | 0.407057 | 4.3:-26126021 | None:intergenic |
| ACAGAAACAAGATTACAAAA+TGG | 0.408202 | 4.3:+26125349 | MS.gene47491:intron |
| TGGAGGGGTACCCCAGTATT+GGG | 0.413728 | 4.3:-26123382 | None:intergenic |
| GGGATCTCGGCAAGGTCTGC+AGG | 0.419859 | 4.3:-26125175 | None:intergenic |
| GTTTGTTGCAGATATCTGAT+AGG | 0.423253 | 4.3:+26126422 | MS.gene47491:intron |
| AGATGCACTCACCTTCTTCC+TGG | 0.426622 | 4.3:-26126346 | None:intergenic |
| AATTTCAGAGCTTTATGTAC+TGG | 0.442340 | 4.3:+26123343 | MS.gene47491:CDS |
| AACAGGACGGTCTTCGTCTC+CGG | 0.443387 | 4.3:-26125056 | None:intergenic |
| ATGGTAAGCATGTTGTATTT+GGG | 0.444699 | 4.3:+26124984 | MS.gene47491:CDS |
| CTTTAAGAAGGCACTGACCT+TGG | 0.457066 | 4.3:+26125996 | MS.gene47491:CDS |
| ACACGAACTGCTCATCTAGA+TGG | 0.458834 | 4.3:+26124965 | MS.gene47491:CDS |
| TCCATTTCACTAGGCATACA+TGG | 0.468241 | 4.3:+26125942 | MS.gene47491:intron |
| ATGGAGGGGTACCCCAGTAT+TGG | 0.470580 | 4.3:-26123383 | None:intergenic |
| CAACCACCAGTCAAGTTCAC+TGG | 0.471787 | 4.3:-26125197 | None:intergenic |
| ATATCTGCTGGAGATGGTAC+TGG | 0.476194 | 4.3:+26124815 | MS.gene47491:CDS |
| AGCTTTGTTTCGCCAAGGAC+AGG | 0.477436 | 4.3:+26125795 | MS.gene47491:CDS |
| GTCAAGTTCACTGGGGATCT+CGG | 0.478450 | 4.3:-26125188 | None:intergenic |
| GTTAAAGGCGCTATGATTGA+AGG | 0.480916 | 4.3:+26124785 | MS.gene47491:CDS |
| ACGTTACCTAGATATTTGTT+GGG | 0.481777 | 4.3:+26125397 | MS.gene47491:CDS |
| GGGAAAGTAGTTAAAGGAAT+GGG | 0.490146 | 4.3:+26125004 | MS.gene47491:CDS |
| TCAATTGAGCACGTTGCGAC+CGG | 0.496798 | 4.3:+26125037 | MS.gene47491:CDS |
| AAATGAAGCATGAAAGGAAA+GGG | 0.497023 | 4.3:+26124882 | MS.gene47491:CDS |
| CCTAGATATTTGTTGGGAGA+AGG | 0.500762 | 4.3:+26125403 | MS.gene47491:CDS |
| AAGGCATTGCTCCCAATACT+GGG | 0.502453 | 4.3:+26123371 | MS.gene47491:CDS |
| GCAAGGTCTGCAGGCCAATC+GGG | 0.505929 | 4.3:-26125166 | None:intergenic |
| AGAACTAGAAGGACGAATAT+TGG | 0.506131 | 4.3:+26123282 | MS.gene47491:CDS |
| TGCAGTTGAAAGCTTTAAGA+AGG | 0.510440 | 4.3:+26125984 | MS.gene47491:CDS |
| TGTTGTTGATGTTAAAATTG+TGG | 0.512036 | 4.3:+26125075 | MS.gene47491:CDS |
| ACTAGCTGCGGCCAGGAAGA+AGG | 0.516262 | 4.3:+26126335 | MS.gene47491:CDS |
| AACACCGGTCCTAATACAAA+TGG | 0.522911 | 4.3:+26124920 | MS.gene47491:CDS |
| TAGCCATACCAACCTGTCCT+TGG | 0.523129 | 4.3:-26125807 | None:intergenic |
| AAAAGGAACTAGCTGCGGCC+AGG | 0.525433 | 4.3:+26126328 | MS.gene47491:CDS |
| ATATTTGTTGGGAGAAGGAA+GGG | 0.525523 | 4.3:+26125408 | MS.gene47491:CDS |
| TGGGAAAGTAGTTAAAGGAA+TGG | 0.530752 | 4.3:+26125003 | MS.gene47491:CDS |
| AGCATAGGTGAAGAACTAGA+AGG | 0.535250 | 4.3:+26123271 | MS.gene47491:CDS |
| AACCACCAGTCAAGTTCACT+GGG | 0.537285 | 4.3:-26125196 | None:intergenic |
| GAAGGAGGTGATATATCTGC+TGG | 0.541862 | 4.3:+26124803 | MS.gene47491:CDS |
| CTAACCATCATTTGGCTCCA+AGG | 0.542156 | 4.3:-26126013 | None:intergenic |
| AGAGAGTACCTTAAAATGGA+GGG | 0.554528 | 4.3:-26123398 | None:intergenic |
| CTGACCTTGGAGCCAAATGA+TGG | 0.557339 | 4.3:+26126009 | MS.gene47491:CDS |
| AGATCCCCAGTGAACTTGAC+TGG | 0.557403 | 4.3:+26125191 | MS.gene47491:CDS |
| GAAATGAAGCATGAAAGGAA+AGG | 0.564179 | 4.3:+26124881 | MS.gene47491:CDS |
| GCAAAAGCTTTGTTTCGCCA+AGG | 0.564247 | 4.3:+26125790 | MS.gene47491:CDS |
| GATATTTGTTGGGAGAAGGA+AGG | 0.565739 | 4.3:+26125407 | MS.gene47491:CDS |
| GAGAAGGAAGGGATTGATGA+AGG | 0.568956 | 4.3:+26125419 | MS.gene47491:CDS |
| AAGGAAAGGGATGCTATCAA+TGG | 0.570871 | 4.3:+26124895 | MS.gene47491:CDS |
| AGAACCATTTGTATTAGGAC+CGG | 0.574306 | 4.3:-26124924 | None:intergenic |
| GGTGATATATCTGCTGGAGA+TGG | 0.574675 | 4.3:+26124809 | MS.gene47491:CDS |
| AAGAGAGTACCTTAAAATGG+AGG | 0.574768 | 4.3:-26123399 | None:intergenic |
| GGCTCTAAGGAAGTATCGAA+AGG | 0.578118 | 4.3:+26125370 | MS.gene47491:CDS |
| ATGGTGATACTTATCCCGAT+TGG | 0.587040 | 4.3:+26125152 | MS.gene47491:CDS |
| GATGTTAAAATTGTGGATTG+TGG | 0.596237 | 4.3:+26125082 | MS.gene47491:CDS |
| ATTCCCGAAGGAGAAGATGA+TGG | 0.607865 | 4.3:+26125109 | MS.gene47491:CDS |
| GTTCACTGGGGATCTCGGCA+AGG | 0.615156 | 4.3:-26125183 | None:intergenic |
| TCGCAACGTGCTCAATTGAA+CGG | 0.615313 | 4.3:-26125033 | None:intergenic |
| ACAGAATTTGCAATGCGTGA+AGG | 0.618981 | 4.3:+26125757 | MS.gene47491:CDS |
| TGCTTCTTAGACATTAGCAT+AGG | 0.626297 | 4.3:+26123256 | MS.gene47491:CDS |
| TCTGCTGGAGATGGTACTGG+AGG | 0.662046 | 4.3:+26124818 | MS.gene47491:CDS |
| GAGAGTACCTTAAAATGGAG+GGG | 0.666958 | 4.3:-26123397 | None:intergenic |
| ATGCTATCAATGGCAAACAC+CGG | 0.676783 | 4.3:+26124905 | MS.gene47491:CDS |
| AAAGGCGCTATGATTGAAGG+AGG | 0.683125 | 4.3:+26124788 | MS.gene47491:CDS |
| TCCCCAGTGAACTTGACTGG+TGG | 0.698905 | 4.3:+26125194 | MS.gene47491:CDS |
| GATTGTGGAGAAATTCCCGA+AGG | 0.703557 | 4.3:+26125097 | MS.gene47491:CDS |
| AGGCATTGCTCCCAATACTG+GGG | 0.727328 | 4.3:+26123372 | MS.gene47491:CDS |
| ACCACCAGTCAAGTTCACTG+GGG | 0.804679 | 4.3:-26125195 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTAACATAATTTATATAA+TGG | - | chr4.3:26124456-26124475 | None:intergenic | 10.0% |
| !! | TTAAAAATAAAGATATGAAA+CGG | - | chr4.3:26124377-26124396 | None:intergenic | 10.0% |
| !! | TTGATTATATTAATTAGTAA+AGG | - | chr4.3:26123711-26123730 | None:intergenic | 10.0% |
| !!! | TTTATATATATTTTGTTTGA+TGG | - | chr4.3:26124518-26124537 | None:intergenic | 10.0% |
| !! | AAATGATGTAATCTAAAAAT+TGG | + | chr4.3:26126208-26126227 | MS.gene47491:intron | 15.0% |
| !! | TAAAAATAAAGATATGAAAC+GGG | - | chr4.3:26124376-26124395 | None:intergenic | 15.0% |
| !! | TAAACATTTAATTCATATCT+CGG | - | chr4.3:26125313-26125332 | None:intergenic | 15.0% |
| !! | TATTGTAACTCAAATATATT+TGG | + | chr4.3:26124549-26124568 | MS.gene47491:intron | 15.0% |
| !!! | AAAAGTATATACTTTTGATA+TGG | + | chr4.3:26124199-26124218 | MS.gene47491:intron | 15.0% |
| !!! | TACTGATTTTATTTTTTTAC+AGG | + | chr4.3:26125690-26125709 | MS.gene47491:intron | 15.0% |
| !!! | TTTGTTGTAATCTAAAAAAA+GGG | + | chr4.3:26123547-26123566 | MS.gene47491:intron | 15.0% |
| !! | AATCATCAAAGAATGAATAA+AGG | - | chr4.3:26123880-26123899 | None:intergenic | 20.0% |
| !! | AATTGAATAAAAAACGATGA+TGG | - | chr4.3:26123437-26123456 | None:intergenic | 20.0% |
| !! | ACAAATGTTAGATATTTATG+TGG | + | chr4.3:26124336-26124355 | MS.gene47491:intron | 20.0% |
| !! | ACTGTTCAGATAAATTTAAA+GGG | + | chr4.3:26125633-26125652 | MS.gene47491:intron | 20.0% |
| !! | ATTGAATAAAAAACGATGAT+GGG | - | chr4.3:26123436-26123455 | None:intergenic | 20.0% |
| !! | TAGAGCTAATTTCATATATT+AGG | - | chr4.3:26125283-26125302 | None:intergenic | 20.0% |
| !! | TCTAAAAGTTTCTTCTTTAT+TGG | + | chr4.3:26123650-26123669 | MS.gene47491:intron | 20.0% |
| !! | TGTTACTATATATCTATACA+TGG | + | chr4.3:26124468-26124487 | MS.gene47491:intron | 20.0% |
| !!! | AAAGGGAATAATAATCTTTT+CGG | - | chr4.3:26123599-26123618 | None:intergenic | 20.0% |
| !!! | AATTTTTATGCACTTGTATA+TGG | + | chr4.3:26126254-26126273 | MS.gene47491:intron | 20.0% |
| !!! | ACATTTAGGATATATTTACA+AGG | + | chr4.3:26124176-26124195 | MS.gene47491:intron | 20.0% |
| !!! | ATAACAAACTTTTTCAAAGA+TGG | + | chr4.3:26125133-26125152 | MS.gene47491:CDS | 20.0% |
| !!! | ATGATAAGTAGGTTTATTTT+TGG | + | chr4.3:26125527-26125546 | MS.gene47491:intron | 20.0% |
| !!! | CTTTGTTGTAATCTAAAAAA+AGG | + | chr4.3:26123546-26123565 | MS.gene47491:intron | 20.0% |
| !!! | GCTAATTTAAAAGTTTTGAT+TGG | + | chr4.3:26123741-26123760 | MS.gene47491:intron | 20.0% |
| !!! | TCTTTAGAAAAAACACAATA+TGG | - | chr4.3:26124658-26124677 | None:intergenic | 20.0% |
| !!! | TGATAAGTAGGTTTATTTTT+GGG | + | chr4.3:26125528-26125547 | MS.gene47491:intron | 20.0% |
| !!! | TTGTTATGAACATACTATTT+TGG | + | chr4.3:26126036-26126055 | MS.gene47491:intron | 20.0% |
| ! | AAAAGTTTCTTCTTTATTGG+TGG | + | chr4.3:26123653-26123672 | MS.gene47491:intron | 25.0% |
| ! | AATCAAAACAGAACAAACAA+AGG | - | chr4.3:26123494-26123513 | None:intergenic | 25.0% |
| ! | ACAGAAACAAGATTACAAAA+TGG | + | chr4.3:26125349-26125368 | MS.gene47491:intron | 25.0% |
| ! | ACAGCAATCAAAAGAATAAA+GGG | - | chr4.3:26123616-26123635 | None:intergenic | 25.0% |
| ! | ACATCAAAGTCAGTTAATAT+AGG | - | chr4.3:26125661-26125680 | None:intergenic | 25.0% |
| ! | ATGTTTAGCTGGAATAAAAA+AGG | + | chr4.3:26126311-26126330 | MS.gene47491:intron | 25.0% |
| ! | ATTGACATTTGAGCTAATAT+AGG | - | chr4.3:26124708-26124727 | None:intergenic | 25.0% |
| ! | CAACAAAATGTTATAAGGTT+CGG | - | chr4.3:26126289-26126308 | None:intergenic | 25.0% |
| ! | CACTGTTCAGATAAATTTAA+AGG | + | chr4.3:26125632-26125651 | MS.gene47491:intron | 25.0% |
| ! | CATTGCAACAAAATGTTATA+AGG | - | chr4.3:26126294-26126313 | None:intergenic | 25.0% |
| ! | GTGAAATAAATAGTAGCAAA+AGG | - | chr4.3:26125452-26125471 | None:intergenic | 25.0% |
| ! | TATCAGAGAAAAAAAAAAGC+AGG | - | chr4.3:26125911-26125930 | None:intergenic | 25.0% |
| ! | TCATAACATAATGAAGAACA+AGG | - | chr4.3:26123837-26123856 | None:intergenic | 25.0% |
| ! | TGTTGTTGATGTTAAAATTG+TGG | + | chr4.3:26125075-26125094 | MS.gene47491:CDS | 25.0% |
| ! | TTCATATCATGAACAAACTT+AGG | - | chr4.3:26124633-26124652 | None:intergenic | 25.0% |
| ! | TTGAAAATAGGAGATGTTAA+AGG | + | chr4.3:26125721-26125740 | MS.gene47491:CDS | 25.0% |
| !! | AATAATCTTTTCGGAATTGA+TGG | - | chr4.3:26123590-26123609 | None:intergenic | 25.0% |
| !! | ATTCATTCTTTGATGATTCA+AGG | + | chr4.3:26123882-26123901 | MS.gene47491:intron | 25.0% |
| !!! | AAAAAGAGAGTACCTTAAAA+TGG | - | chr4.3:26123405-26123424 | None:intergenic | 25.0% |
| !!! | AAAGTTTTGATTGGTACATT+TGG | + | chr4.3:26123750-26123769 | MS.gene47491:intron | 25.0% |
| !!! | AAGTTTTGATTGGTACATTT+GGG | + | chr4.3:26123751-26123770 | MS.gene47491:intron | 25.0% |
| !!! | ACAATTTTAACATCAACAAC+AGG | - | chr4.3:26125076-26125095 | None:intergenic | 25.0% |
| !!! | ATATGCTGTTGTTATTTTCA+GGG | + | chr4.3:26124743-26124762 | MS.gene47491:intron | 25.0% |
| !!! | ATTTTGAAATGAAGCATGAA+AGG | + | chr4.3:26124876-26124895 | MS.gene47491:CDS | 25.0% |
| !!! | TATATGCTGTTGTTATTTTC+AGG | + | chr4.3:26124742-26124761 | MS.gene47491:intron | 25.0% |
| AAAAGGGTTGAACTTGAATT+TGG | + | chr4.3:26123563-26123582 | MS.gene47491:intron | 30.0% | |
| AAATGAAGCATGAAAGGAAA+GGG | + | chr4.3:26124882-26124901 | MS.gene47491:CDS | 30.0% | |
| AACTGAGAACCATTTGTATT+AGG | - | chr4.3:26124932-26124951 | None:intergenic | 30.0% | |
| AAGCATTATGTATACTTCTC+TGG | + | chr4.3:26126384-26126403 | MS.gene47491:intron | 30.0% | |
| AATAAAAAAGGAACTAGCTG+CGG | + | chr4.3:26126323-26126342 | MS.gene47491:CDS | 30.0% | |
| ACGTTACCTAGATATTTGTT+GGG | + | chr4.3:26125397-26125416 | MS.gene47491:CDS | 30.0% | |
| ATGGTAAGCATGTTGTATTT+GGG | + | chr4.3:26124984-26125003 | MS.gene47491:CDS | 30.0% | |
| CACAGCAATCAAAAGAATAA+AGG | - | chr4.3:26123617-26123636 | None:intergenic | 30.0% | |
| CAGGCTTGTAAATTGAAAAT+AGG | + | chr4.3:26125709-26125728 | MS.gene47491:intron | 30.0% | |
| CATAACAACTAACCATCATT+TGG | - | chr4.3:26126024-26126043 | None:intergenic | 30.0% | |
| CATGAACAAACTTAGGAATT+TGG | - | chr4.3:26124626-26124645 | None:intergenic | 30.0% | |
| CGAAAAAAAGAGTCTTTGAT+AGG | - | chr4.3:26123471-26123490 | None:intergenic | 30.0% | |
| GAAGATGGAATCGTTAAAAT+TGG | + | chr4.3:26124048-26124067 | MS.gene47491:intron | 30.0% | |
| GTAAACGATACATTTGATGA+TGG | + | chr4.3:26123939-26123958 | MS.gene47491:intron | 30.0% | |
| GTATTTGGGAAAGTAGTTAA+AGG | + | chr4.3:26124998-26125017 | MS.gene47491:CDS | 30.0% | |
| TACGTTACCTAGATATTTGT+TGG | + | chr4.3:26125396-26125415 | MS.gene47491:CDS | 30.0% | |
| TATCTTACTTCCATTTCACT+AGG | + | chr4.3:26125933-26125952 | MS.gene47491:intron | 30.0% | |
| TGCTTTCATCGTATTGTTAA+AGG | + | chr4.3:26124770-26124789 | MS.gene47491:CDS | 30.0% | |
| TGGATGATAGAATGAGAAAT+GGG | + | chr4.3:26124026-26124045 | MS.gene47491:intron | 30.0% | |
| TTAGCTCAAATGTCAATCAT+TGG | + | chr4.3:26124711-26124730 | MS.gene47491:intron | 30.0% | |
| TTGGGGAAAAAAACACATTT+AGG | + | chr4.3:26124162-26124181 | MS.gene47491:intron | 30.0% | |
| ! | AAGATTACAAAATGGCTCTA+AGG | + | chr4.3:26125357-26125376 | MS.gene47491:CDS | 30.0% |
| ! | AATTTCAGAGCTTTATGTAC+TGG | + | chr4.3:26123343-26123362 | MS.gene47491:CDS | 30.0% |
| ! | ACAAAGCTTTTGCATTGTTA+TGG | - | chr4.3:26125783-26125802 | None:intergenic | 30.0% |
| ! | ATTTTGTTGCAATGTTTAGC+TGG | + | chr4.3:26126300-26126319 | MS.gene47491:intron | 30.0% |
| ! | CTGAAATTTTCAGCAGTTTT+GGG | - | chr4.3:26123331-26123350 | None:intergenic | 30.0% |
| ! | GATGTTAAAATTGTGGATTG+TGG | + | chr4.3:26125082-26125101 | MS.gene47491:CDS | 30.0% |
| ! | TTTTAACATCAACAACAGGA+CGG | - | chr4.3:26125072-26125091 | None:intergenic | 30.0% |
| !! | AAGAGCTTTGAATCATCATA+TGG | + | chr4.3:26125833-26125852 | MS.gene47491:intron | 30.0% |
| !! | ACATTTTGACATTCATTGGT+TGG | + | chr4.3:26124143-26124162 | MS.gene47491:intron | 30.0% |
| !! | ATTTTGACATTCATTGGTTG+GGG | + | chr4.3:26124145-26124164 | MS.gene47491:intron | 30.0% |
| !! | CATTTTGACATTCATTGGTT+GGG | + | chr4.3:26124144-26124163 | MS.gene47491:intron | 30.0% |
| !! | TATTTTGGATCAAACCTTTG+CGG | + | chr4.3:26126051-26126070 | MS.gene47491:intron | 30.0% |
| !! | TCTGAAATTTTCAGCAGTTT+TGG | - | chr4.3:26123332-26123351 | None:intergenic | 30.0% |
| !! | TGTGACATTTTGACATTCAT+TGG | + | chr4.3:26124139-26124158 | MS.gene47491:intron | 30.0% |
| !! | TTTGTAATCTTGTTTCTGTC+AGG | - | chr4.3:26125348-26125367 | None:intergenic | 30.0% |
| AACCTACTTATCATGTGCAA+AGG | - | chr4.3:26125521-26125540 | None:intergenic | 35.0% | |
| ACAAGTTTGCGAGATATTAG+TGG | + | chr4.3:26123912-26123931 | MS.gene47491:intron | 35.0% | |
| ACTGGAGGAGAATCTATATA+TGG | + | chr4.3:26124833-26124852 | MS.gene47491:CDS | 35.0% | |
| AGAACCATTTGTATTAGGAC+CGG | - | chr4.3:26124927-26124946 | None:intergenic | 35.0% | |
| AGAACTAGAAGGACGAATAT+TGG | + | chr4.3:26123282-26123301 | MS.gene47491:CDS | 35.0% | |
| ATCCTTTGCACATGATAAGT+AGG | + | chr4.3:26125516-26125535 | MS.gene47491:intron | 35.0% | |
| CAATTAGACAGAAGCTATGT+TGG | + | chr4.3:26124001-26124020 | MS.gene47491:intron | 35.0% | |
| GAAATGAAGCATGAAAGGAA+AGG | + | chr4.3:26124881-26124900 | MS.gene47491:CDS | 35.0% | |
| GATGGTAAGCATGTTGTATT+TGG | + | chr4.3:26124983-26125002 | MS.gene47491:CDS | 35.0% | |
| GGGAAAGTAGTTAAAGGAAT+GGG | + | chr4.3:26125004-26125023 | MS.gene47491:CDS | 35.0% | |
| GTAAGCAATTGACATAGTCA+AGG | + | chr4.3:26124088-26124107 | MS.gene47491:intron | 35.0% | |
| GTGGATGATAGAATGAGAAA+TGG | + | chr4.3:26124025-26124044 | MS.gene47491:intron | 35.0% | |
| TAGAAGCCTGACATAGTAAA+GGG | - | chr4.3:26125868-26125887 | None:intergenic | 35.0% | |
| TAGAATGAGAAATGGGAAGA+TGG | + | chr4.3:26124033-26124052 | MS.gene47491:intron | 35.0% | |
| TGCTTCTTAGACATTAGCAT+AGG | + | chr4.3:26123256-26123275 | MS.gene47491:CDS | 35.0% | |
| TGGGAAAGTAGTTAAAGGAA+TGG | + | chr4.3:26125003-26125022 | MS.gene47491:CDS | 35.0% | |
| TTACAAACAGCTCAGTAAGT+TGG | + | chr4.3:26125597-26125616 | MS.gene47491:intron | 35.0% | |
| ! | ATATTTGTTGGGAGAAGGAA+GGG | + | chr4.3:26125408-26125427 | MS.gene47491:CDS | 35.0% |
| ! | GCTTTATGTACTGGTGAAAA+AGG | + | chr4.3:26123352-26123371 | MS.gene47491:CDS | 35.0% |
| ! | GGATACCTTTTGGATACTTT+GGG | + | chr4.3:26123772-26123791 | MS.gene47491:intron | 35.0% |
| ! | GTTTGTTGCAGATATCTGAT+AGG | + | chr4.3:26126422-26126441 | MS.gene47491:intron | 35.0% |
| ! | TGTATCCCAAAGTATCCAAA+AGG | - | chr4.3:26123780-26123799 | None:intergenic | 35.0% |
| ! | TTTTGGCAATGAGTGTTACA+AGG | + | chr4.3:26125243-26125262 | MS.gene47491:CDS | 35.0% |
| !! | AACGATACATTTGATGATGG+CGG | + | chr4.3:26123942-26123961 | MS.gene47491:intron | 35.0% |
| !! | AAGAGAGTACCTTAAAATGG+AGG | - | chr4.3:26123402-26123421 | None:intergenic | 35.0% |
| !! | AGAGAGTACCTTAAAATGGA+GGG | - | chr4.3:26123401-26123420 | None:intergenic | 35.0% |
| !! | GTTATAAGGTTCGGTGTAAA+TGG | - | chr4.3:26126280-26126299 | None:intergenic | 35.0% |
| !! | GTTGACTCAATCAAAGCTTT+TGG | + | chr4.3:26125226-26125245 | MS.gene47491:CDS | 35.0% |
| !! | TGCAGTTGAAAGCTTTAAGA+AGG | + | chr4.3:26125984-26126003 | MS.gene47491:CDS | 35.0% |
| AACACCGGTCCTAATACAAA+TGG | + | chr4.3:26124920-26124939 | MS.gene47491:CDS | 40.0% | |
| AAGGAAAGGGATGCTATCAA+TGG | + | chr4.3:26124895-26124914 | MS.gene47491:CDS | 40.0% | |
| ACAGAATTTGCAATGCGTGA+AGG | + | chr4.3:26125757-26125776 | MS.gene47491:CDS | 40.0% | |
| ACCATGTATGCCTAGTGAAA+TGG | - | chr4.3:26125946-26125965 | None:intergenic | 40.0% | |
| AGCATAGGTGAAGAACTAGA+AGG | + | chr4.3:26123271-26123290 | MS.gene47491:CDS | 40.0% | |
| ATGCTATCAATGGCAAACAC+CGG | + | chr4.3:26124905-26124924 | MS.gene47491:CDS | 40.0% | |
| ATGGTGATACTTATCCCGAT+TGG | + | chr4.3:26125152-26125171 | MS.gene47491:CDS | 40.0% | |
| CCTTCTCCCAACAAATATCT+AGG | - | chr4.3:26125406-26125425 | None:intergenic | 40.0% | |
| CTAGAAGCCTGACATAGTAA+AGG | - | chr4.3:26125869-26125888 | None:intergenic | 40.0% | |
| TATGCCATCATCTTCTCCTT+CGG | - | chr4.3:26125116-26125135 | None:intergenic | 40.0% | |
| TCCATTTCACTAGGCATACA+TGG | + | chr4.3:26125942-26125961 | MS.gene47491:intron | 40.0% | |
| ! | CCTAGATATTTGTTGGGAGA+AGG | + | chr4.3:26125403-26125422 | MS.gene47491:CDS | 40.0% |
| ! | GATATTTGTTGGGAGAAGGA+AGG | + | chr4.3:26125407-26125426 | MS.gene47491:CDS | 40.0% |
| ! | GGGATACCTTTTGGATACTT+TGG | + | chr4.3:26123771-26123790 | MS.gene47491:intron | 40.0% |
| ! | TGCTGCTTGTACAGTTGTAA+GGG | + | chr4.3:26124576-26124595 | MS.gene47491:intron | 40.0% |
| !! | ACGATACATTTGATGATGGC+GGG | + | chr4.3:26123943-26123962 | MS.gene47491:intron | 40.0% |
| !! | GAGAGTACCTTAAAATGGAG+GGG | - | chr4.3:26123400-26123419 | None:intergenic | 40.0% |
| !! | GGTACATTTGGGATACCTTT+TGG | + | chr4.3:26123762-26123781 | MS.gene47491:intron | 40.0% |
| !! | GTTAAAGGCGCTATGATTGA+AGG | + | chr4.3:26124785-26124804 | MS.gene47491:CDS | 40.0% |
| !! | TATGTCAGGCTTCTAGTTTC+AGG | + | chr4.3:26125873-26125892 | MS.gene47491:intron | 40.0% |
| AACCACCAGTCAAGTTCACT+GGG | - | chr4.3:26125199-26125218 | None:intergenic | 45.0% | |
| ACACGAACTGCTCATCTAGA+TGG | + | chr4.3:26124965-26124984 | MS.gene47491:CDS | 45.0% | |
| AGACAGAAGCTATGTTGGTG+TGG | + | chr4.3:26124006-26124025 | MS.gene47491:intron | 45.0% | |
| ATATCTGCTGGAGATGGTAC+TGG | + | chr4.3:26124815-26124834 | MS.gene47491:CDS | 45.0% | |
| ATGCCATCATCTTCTCCTTC+GGG | - | chr4.3:26125115-26125134 | None:intergenic | 45.0% | |
| ATTCCCGAAGGAGAAGATGA+TGG | + | chr4.3:26125109-26125128 | MS.gene47491:CDS | 45.0% | |
| CGGGGATGCATTTCTTGAAT+TGG | + | chr4.3:26123962-26123981 | MS.gene47491:intron | 45.0% | |
| GAAGGAGGTGATATATCTGC+TGG | + | chr4.3:26124803-26124822 | MS.gene47491:CDS | 45.0% | |
| GAGAAGGAAGGGATTGATGA+AGG | + | chr4.3:26125419-26125438 | MS.gene47491:CDS | 45.0% | |
| GATTGTGGAGAAATTCCCGA+AGG | + | chr4.3:26125097-26125116 | MS.gene47491:CDS | 45.0% | |
| GCTGCTTGTACAGTTGTAAG+GGG | + | chr4.3:26124577-26124596 | MS.gene47491:intron | 45.0% | |
| GGGTTTGCAGAGAAAAGTTC+AGG | + | chr4.3:26125548-26125567 | MS.gene47491:intron | 45.0% | |
| GGTGATATATCTGCTGGAGA+TGG | + | chr4.3:26124809-26124828 | MS.gene47491:CDS | 45.0% | |
| TCGCAACGTGCTCAATTGAA+CGG | - | chr4.3:26125036-26125055 | None:intergenic | 45.0% | |
| TTGTCGCCCTTTACTATGTC+AGG | + | chr4.3:26125859-26125878 | MS.gene47491:intron | 45.0% | |
| ! | CACAGAAAAGTACACCGCAA+AGG | - | chr4.3:26126068-26126087 | None:intergenic | 45.0% |
| ! | CTAACCATCATTTGGCTCCA+AGG | - | chr4.3:26126016-26126035 | None:intergenic | 45.0% |
| !! | AAAGGCATTGCTCCCAATAC+TGG | + | chr4.3:26123370-26123389 | MS.gene47491:CDS | 45.0% |
| !! | AAAGGCGCTATGATTGAAGG+AGG | + | chr4.3:26124788-26124807 | MS.gene47491:CDS | 45.0% |
| !! | AAGGCATTGCTCCCAATACT+GGG | + | chr4.3:26123371-26123390 | MS.gene47491:CDS | 45.0% |
| !! | CGATACATTTGATGATGGCG+GGG | + | chr4.3:26123944-26123963 | MS.gene47491:intron | 45.0% |
| !! | CTTTAAGAAGGCACTGACCT+TGG | + | chr4.3:26125996-26126015 | MS.gene47491:CDS | 45.0% |
| !! | GCAAAAGCTTTGTTTCGCCA+AGG | + | chr4.3:26125790-26125809 | MS.gene47491:CDS | 45.0% |
| !! | GGCTCTAAGGAAGTATCGAA+AGG | + | chr4.3:26125370-26125389 | MS.gene47491:CDS | 45.0% |
| !! | GTGCTGCTTGTACAGTTGTA+AGG | + | chr4.3:26124575-26124594 | MS.gene47491:intron | 45.0% |
| ACCACCAGTCAAGTTCACTG+GGG | - | chr4.3:26125198-26125217 | None:intergenic | 50.0% | |
| AGATCCCCAGTGAACTTGAC+TGG | + | chr4.3:26125191-26125210 | MS.gene47491:CDS | 50.0% | |
| AGATGCACTCACCTTCTTCC+TGG | - | chr4.3:26126349-26126368 | None:intergenic | 50.0% | |
| CAACCACCAGTCAAGTTCAC+TGG | - | chr4.3:26125200-26125219 | None:intergenic | 50.0% | |
| CTGACCTTGGAGCCAAATGA+TGG | + | chr4.3:26126009-26126028 | MS.gene47491:CDS | 50.0% | |
| GTCAAGTTCACTGGGGATCT+CGG | - | chr4.3:26125191-26125210 | None:intergenic | 50.0% | |
| TAGCCATACCAACCTGTCCT+TGG | - | chr4.3:26125810-26125829 | None:intergenic | 50.0% | |
| TCAATTGAGCACGTTGCGAC+CGG | + | chr4.3:26125037-26125056 | MS.gene47491:CDS | 50.0% | |
| TTGTTTCGCCAAGGACAGGT+TGG | + | chr4.3:26125799-26125818 | MS.gene47491:intron | 50.0% | |
| ! | AGGCATTGCTCCCAATACTG+GGG | + | chr4.3:26123372-26123391 | MS.gene47491:CDS | 50.0% |
| !! | AGCTTTGTTTCGCCAAGGAC+AGG | + | chr4.3:26125795-26125814 | MS.gene47491:CDS | 50.0% |
| !! | TGGGGTACCCCTCCATTTTA+AGG | + | chr4.3:26123390-26123409 | MS.gene47491:CDS | 50.0% |
| AAAAGGAACTAGCTGCGGCC+AGG | + | chr4.3:26126328-26126347 | MS.gene47491:CDS | 55.0% | |
| AACAGGACGGTCTTCGTCTC+CGG | - | chr4.3:26125059-26125078 | None:intergenic | 55.0% | |
| TCCCCAGTGAACTTGACTGG+TGG | + | chr4.3:26125194-26125213 | MS.gene47491:CDS | 55.0% | |
| ! | TCTGCTGGAGATGGTACTGG+AGG | + | chr4.3:26124818-26124837 | MS.gene47491:CDS | 55.0% |
| !! | ATGGAGGGGTACCCCAGTAT+TGG | - | chr4.3:26123386-26123405 | None:intergenic | 55.0% |
| !! | TCGCCAAGGACAGGTTGGTA+TGG | + | chr4.3:26125804-26125823 | MS.gene47491:intron | 55.0% |
| !! | TGGAGGGGTACCCCAGTATT+GGG | - | chr4.3:26123385-26123404 | None:intergenic | 55.0% |
| ACTAGCTGCGGCCAGGAAGA+AGG | + | chr4.3:26126335-26126354 | MS.gene47491:CDS | 60.0% | |
| GCAAGGTCTGCAGGCCAATC+GGG | - | chr4.3:26125169-26125188 | None:intergenic | 60.0% | |
| GGCAAGGTCTGCAGGCCAAT+CGG | - | chr4.3:26125170-26125189 | None:intergenic | 60.0% | |
| GTTCACTGGGGATCTCGGCA+AGG | - | chr4.3:26125186-26125205 | None:intergenic | 60.0% | |
| GGGATCTCGGCAAGGTCTGC+AGG | - | chr4.3:26125178-26125197 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 26123241 | 26126492 | 26123241 | ID=MS.gene47491 |
| chr4.3 | mRNA | 26123241 | 26126492 | 26123241 | ID=MS.gene47491.t1;Parent=MS.gene47491 |
| chr4.3 | exon | 26123241 | 26123411 | 26123241 | ID=MS.gene47491.t1.exon1;Parent=MS.gene47491.t1 |
| chr4.3 | CDS | 26123241 | 26123411 | 26123241 | ID=cds.MS.gene47491.t1;Parent=MS.gene47491.t1 |
| chr4.3 | exon | 26124764 | 26125264 | 26124764 | ID=MS.gene47491.t1.exon2;Parent=MS.gene47491.t1 |
| chr4.3 | CDS | 26124764 | 26125264 | 26124764 | ID=cds.MS.gene47491.t1;Parent=MS.gene47491.t1 |
| chr4.3 | exon | 26125353 | 26125440 | 26125353 | ID=MS.gene47491.t1.exon3;Parent=MS.gene47491.t1 |
| chr4.3 | CDS | 26125353 | 26125440 | 26125353 | ID=cds.MS.gene47491.t1;Parent=MS.gene47491.t1 |
| chr4.3 | exon | 26125558 | 26125610 | 26125558 | ID=MS.gene47491.t1.exon4;Parent=MS.gene47491.t1 |
| chr4.3 | CDS | 26125558 | 26125610 | 26125558 | ID=cds.MS.gene47491.t1;Parent=MS.gene47491.t1 |
| chr4.3 | exon | 26125712 | 26125816 | 26125712 | ID=MS.gene47491.t1.exon5;Parent=MS.gene47491.t1 |
| chr4.3 | CDS | 26125712 | 26125816 | 26125712 | ID=cds.MS.gene47491.t1;Parent=MS.gene47491.t1 |
| chr4.3 | exon | 26125955 | 26126030 | 26125955 | ID=MS.gene47491.t1.exon6;Parent=MS.gene47491.t1 |
| chr4.3 | CDS | 26125955 | 26126030 | 26125955 | ID=cds.MS.gene47491.t1;Parent=MS.gene47491.t1 |
| chr4.3 | exon | 26126319 | 26126356 | 26126319 | ID=MS.gene47491.t1.exon7;Parent=MS.gene47491.t1 |
| chr4.3 | CDS | 26126319 | 26126356 | 26126319 | ID=cds.MS.gene47491.t1;Parent=MS.gene47491.t1 |
| chr4.3 | exon | 26126433 | 26126492 | 26126433 | ID=MS.gene47491.t1.exon8;Parent=MS.gene47491.t1 |
| chr4.3 | CDS | 26126433 | 26126492 | 26126433 | ID=cds.MS.gene47491.t1;Parent=MS.gene47491.t1 |
| Gene Sequence |
| Protein sequence |
