Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48182.t1 | RHN50986.1 | 95.1 | 41 | 2 | 0 | 1 | 41 | 1 | 41 | 6.70E-10 | 74.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48182.t1 | A0A072U8W7 | 95.1 | 41 | 2 | 0 | 1 | 41 | 1 | 41 | 4.9e-10 | 74.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050380 | MS.gene48182 | 0.803634 | 3.17E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene48182 | -0.813192 | 2.90E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene48182 | -0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene48182 | 0.830257 | 3.25E-55 | -1.69E-46 |
| MS.gene050971 | MS.gene48182 | -0.811091 | 8.33E-51 | -1.69E-46 |
| MS.gene054290 | MS.gene48182 | 0.852803 | 3.63E-61 | -1.69E-46 |
| MS.gene055601 | MS.gene48182 | 0.846206 | 2.51E-59 | -1.69E-46 |
| MS.gene056330 | MS.gene48182 | 0.817842 | 2.67E-52 | -1.69E-46 |
| MS.gene056899 | MS.gene48182 | 0.846146 | 2.61E-59 | -1.69E-46 |
| MS.gene057544 | MS.gene48182 | 0.810875 | 9.27E-51 | -1.69E-46 |
| MS.gene058179 | MS.gene48182 | 0.802033 | 6.80E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene48182 | 0.870013 | 2.01E-66 | -1.69E-46 |
| MS.gene058928 | MS.gene48182 | -0.81083 | 9.49E-51 | -1.69E-46 |
| MS.gene059043 | MS.gene48182 | 0.820954 | 5.22E-53 | -1.69E-46 |
| MS.gene059294 | MS.gene48182 | -0.808285 | 3.34E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48182.t1 | MTR_6g034870 | 49.817 | 273 | 13 | 7 | 1 | 163 | 1 | 259 | 3.22e-24 | 100 |
| MS.gene48182.t1 | MTR_1g094130 | 40.909 | 220 | 55 | 5 | 1 | 147 | 27 | 244 | 2.00e-17 | 80.1 |
| MS.gene48182.t1 | MTR_1g033130 | 53.140 | 207 | 48 | 9 | 85 | 247 | 610 | 811 | 2.26e-14 | 72.8 |
| MS.gene48182.t1 | MTR_1g033130 | 50.971 | 206 | 42 | 9 | 30 | 180 | 611 | 812 | 2.81e-12 | 66.6 |
| MS.gene48182.t1 | MTR_1g033130 | 50.777 | 193 | 47 | 8 | 102 | 250 | 610 | 798 | 8.99e-11 | 62.0 |
| MS.gene48182.t1 | MTR_6g034905 | 85.393 | 89 | 3 | 1 | 1 | 89 | 1 | 79 | 3.49e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 123 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTAATTGTTTGCTGAAATT+TGG | 0.104183 | 6.4:-7325738 | None:intergenic |
| GGTGAGTAGACGGGTGGAGG+TGG | 0.300627 | 6.4:-7325991 | None:intergenic |
| GGTGAGTAGACGGGTGGAGG+TGG | 0.300627 | 6.4:-7326042 | None:intergenic |
| GGTGAGTAGACGGGTGGAGG+TGG | 0.300627 | 6.4:-7326144 | None:intergenic |
| GGTGAGTAGACGGGTGGAGG+AGG | 0.319166 | 6.4:-7326093 | None:intergenic |
| GGTGACTTGTACTTGTAAAC+TGG | 0.357024 | 6.4:-7326225 | None:intergenic |
| GGTGACTTGTACTTGTAAAC+TGG | 0.357024 | 6.4:-7326276 | None:intergenic |
| GGTGGTGAGTAGACGGGTGG+AGG | 0.368131 | 6.4:-7326198 | None:intergenic |
| GGTGGTGAGTAGACGGGAGG+AGG | 0.376600 | 6.4:-7326249 | None:intergenic |
| GGTGAGTAGACGGGTGGAGG+AGG | 0.379141 | 6.4:-7326195 | None:intergenic |
| TAAGAGTAATGGAGGCCATT+TGG | 0.393938 | 6.4:-7325678 | None:intergenic |
| GTAATTGTTTGCTGAAATTT+GGG | 0.394931 | 6.4:-7325737 | None:intergenic |
| GGTGGTGAGTAGACAGGTGG+GGG | 0.401670 | 6.4:-7325841 | None:intergenic |
| GGTGAGTAAGCAGGAGGAGG+AGG | 0.413816 | 6.4:-7326348 | None:intergenic |
| TACTTGTAAACTGGTGGTGG+TGG | 0.421070 | 6.4:-7325808 | None:intergenic |
| GGTGAGTAGACGGGAGGAGG+TGG | 0.429690 | 6.4:-7326246 | None:intergenic |
| GGTGGTGAGTAGACGGGTGG+AGG | 0.432340 | 6.4:-7326096 | None:intergenic |
| GGAGGTGGTGAGTAGACAGG+TGG | 0.439184 | 6.4:-7325844 | None:intergenic |
| GGTGGGGAAGCGTATTTGTA+TGG | 0.439487 | 6.4:-7325790 | None:intergenic |
| GGTGGTGAGTAGACGGGTGG+AGG | 0.441074 | 6.4:-7325994 | None:intergenic |
| GGTGGTGAGTAGACGGGTGG+AGG | 0.441074 | 6.4:-7326045 | None:intergenic |
| GGTGGTGAGTAGACGGGTGG+AGG | 0.441074 | 6.4:-7326147 | None:intergenic |
| GGAGACTTGTATTTGTAAAG+TGG | 0.445599 | 6.4:-7326174 | None:intergenic |
| GGAGACTTATACTTGTAAAC+TGG | 0.445660 | 6.4:-7326327 | None:intergenic |
| GGTGACTTATACTTGTAAAC+AGG | 0.447648 | 6.4:-7325868 | None:intergenic |
| GGTGACTTATACTTGTAAAC+AGG | 0.447648 | 6.4:-7325919 | None:intergenic |
| GGTGATTTATACTTGTAAAC+TGG | 0.448161 | 6.4:-7325817 | None:intergenic |
| GGAAAATATGAGGTTCCAAA+TGG | 0.456109 | 6.4:+7325663 | None:intergenic |
| GGGGACTTGTACTTGTAAAC+TGG | 0.458453 | 6.4:-7326072 | None:intergenic |
| GGGGACTTGTACTTGTAAAC+TGG | 0.460087 | 6.4:-7326021 | None:intergenic |
| GGGGACTTGTACTTGTAAAC+TGG | 0.460087 | 6.4:-7326123 | None:intergenic |
| GGTGGTGGTGGTGAGTAGAC+GGG | 0.460333 | 6.4:-7326153 | None:intergenic |
| GGTGGTGAGTAGACTGGTGG+AGG | 0.460575 | 6.4:-7325892 | None:intergenic |
| GGAGGTGGTGAGTAGACGGG+TGG | 0.465265 | 6.4:-7326201 | None:intergenic |
| GTGAGTAGACGGGTGGAGGT+GGG | 0.465366 | 6.4:-7325990 | None:intergenic |
| GTGAGTAGACGGGTGGAGGT+GGG | 0.465366 | 6.4:-7326041 | None:intergenic |
| GTGAGTAGACGGGTGGAGGT+GGG | 0.465366 | 6.4:-7326143 | None:intergenic |
| GGTGGAGGTGGTGAGTAAGC+AGG | 0.475649 | 6.4:-7326357 | None:intergenic |
| GGTGGTGAGTAAGCAGGAGG+AGG | 0.480025 | 6.4:-7326351 | None:intergenic |
| GGGGACTTGTAATTGTAAAC+TGG | 0.481748 | 6.4:-7325970 | None:intergenic |
| GGTGGTGAGTAGACAGGTGG+AGG | 0.483587 | 6.4:-7325943 | None:intergenic |
| TACTTGTAAACTGGTGGTGG+TGG | 0.483654 | 6.4:-7326012 | None:intergenic |
| TACTTGTAAACTGGTGGTGG+TGG | 0.483654 | 6.4:-7326063 | None:intergenic |
| GGAGGTGGTGAGTAGACGGG+AGG | 0.484213 | 6.4:-7326252 | None:intergenic |
| TGGTGGTGGTGGTGAGTAGA+CGG | 0.490266 | 6.4:-7326154 | None:intergenic |
| GGTGAATAGACAGGAGGAGG+TGG | 0.493408 | 6.4:-7326297 | None:intergenic |
| GAGGTGGTGAGTAGACAGGT+GGG | 0.495523 | 6.4:-7325843 | None:intergenic |
| GGTGAGTAGACAGGTGGAGG+TGG | 0.506411 | 6.4:-7325940 | None:intergenic |
| GGTGAGTAGACTGGTGGAGG+TGG | 0.509653 | 6.4:-7325889 | None:intergenic |
| TGAGTAGACGGGTGGAGGTG+GGG | 0.516214 | 6.4:-7325989 | None:intergenic |
| TGAGTAGACGGGTGGAGGTG+GGG | 0.516214 | 6.4:-7326040 | None:intergenic |
| TGAGTAGACGGGTGGAGGTG+GGG | 0.516214 | 6.4:-7326142 | None:intergenic |
| TACTTGTAAACTGGTGGAGG+TGG | 0.518842 | 6.4:-7326114 | None:intergenic |
| TAGATATAATGTGGTGGAGG+TGG | 0.521642 | 6.4:-7326369 | None:intergenic |
| GTGACTTGTACTTGTAAACT+GGG | 0.523791 | 6.4:-7326224 | None:intergenic |
| GTGACTTGTACTTGTAAACT+GGG | 0.523791 | 6.4:-7326275 | None:intergenic |
| GGTGGTGAATAGACAGGAGG+AGG | 0.525145 | 6.4:-7326300 | None:intergenic |
| GTGAGTAGACGGGTGGAGGA+GGG | 0.525831 | 6.4:-7326092 | None:intergenic |
| TGAGTAGACGGGTGGAGGAG+GGG | 0.526670 | 6.4:-7326091 | None:intergenic |
| GGTGGTGGTGGTGAGTAGAC+GGG | 0.529501 | 6.4:-7326000 | None:intergenic |
| GGTGGTGGTGGTGAGTAGAC+GGG | 0.529501 | 6.4:-7326051 | None:intergenic |
| TACTTGTAAACAGGTGGAGG+TGG | 0.529739 | 6.4:-7325859 | None:intergenic |
| TACTTGTAAACAGGTGGAGG+TGG | 0.529739 | 6.4:-7325910 | None:intergenic |
| GGTGGAGGTGGTGAGTAGAC+GGG | 0.530290 | 6.4:-7326102 | None:intergenic |
| TATTTGTAAAGTGGTGGTGG+TGG | 0.531779 | 6.4:-7326165 | None:intergenic |
| TTGTACTTGTAAACTGGTGG+TGG | 0.532190 | 6.4:-7326015 | None:intergenic |
| TTGTACTTGTAAACTGGTGG+TGG | 0.532190 | 6.4:-7326066 | None:intergenic |
| GCGTATTTGTATGGCTTAGA+CGG | 0.536718 | 6.4:-7325781 | None:intergenic |
| TAGTAGTGGTAAGGAGGAGG+TGG | 0.537644 | 6.4:-7326399 | None:intergenic |
| GGTGGAGGTGGTGAGTAGAC+AGG | 0.541551 | 6.4:-7325847 | None:intergenic |
| TGGTGGTGGTGGTGAGTAGA+CGG | 0.545412 | 6.4:-7326001 | None:intergenic |
| TGGTGGTGGTGGTGAGTAGA+CGG | 0.545412 | 6.4:-7326052 | None:intergenic |
| TACTTGTAAACTGGTGGAGG+TGG | 0.545632 | 6.4:-7326318 | None:intergenic |
| CAATGCAATAGTAAGAGTAA+TGG | 0.551028 | 6.4:-7325689 | None:intergenic |
| ACCACCATTTAGTAGTGGTA+AGG | 0.552807 | 6.4:-7326408 | None:intergenic |
| GGTGGAGGTGGTGAGTAGAC+AGG | 0.556465 | 6.4:-7325949 | None:intergenic |
| TATGGCTTAGACGGTGGTGG+TGG | 0.556589 | 6.4:-7325772 | None:intergenic |
| TGGTGGAGGTGGTGAGTAGA+CGG | 0.560893 | 6.4:-7326103 | None:intergenic |
| TTGTATTTGTAAAGTGGTGG+TGG | 0.568694 | 6.4:-7326168 | None:intergenic |
| GGTGGAGGTGGTGAATAGAC+AGG | 0.569201 | 6.4:-7326306 | None:intergenic |
| CTTGTAAACTGGTGGTGGTG+GGG | 0.574955 | 6.4:-7325806 | None:intergenic |
| GACTTGTACTTGTAAACTGG+TGG | 0.575994 | 6.4:-7326018 | None:intergenic |
| TTATACTTGTAAACTGGTGG+TGG | 0.577426 | 6.4:-7325811 | None:intergenic |
| GGTGGAGGTGGTGAGTAGAC+TGG | 0.577950 | 6.4:-7325898 | None:intergenic |
| GACTTATACTTGTAAACTGG+TGG | 0.580181 | 6.4:-7326324 | None:intergenic |
| GGAGGTGGTGAGTAGACAGG+TGG | 0.584342 | 6.4:-7325946 | None:intergenic |
| GGTGGTGGTGAGTAGACGGG+TGG | 0.586082 | 6.4:-7325997 | None:intergenic |
| GGTGGTGGTGAGTAGACGGG+TGG | 0.586082 | 6.4:-7326048 | None:intergenic |
| GGTGGTGGTGAGTAGACGGG+TGG | 0.586082 | 6.4:-7326150 | None:intergenic |
| TGCAATAGTAAGAGTAATGG+AGG | 0.586366 | 6.4:-7325686 | None:intergenic |
| GACTTGTAATTGTAAACTGG+TGG | 0.588392 | 6.4:-7325967 | None:intergenic |
| TTATACTTGTAAACTGGTGG+AGG | 0.588467 | 6.4:-7326321 | None:intergenic |
| ACTTGTAAACTGGTGGTGGT+GGG | 0.589086 | 6.4:-7325807 | None:intergenic |
| TAATTGTAAACTGGTGGAGG+TGG | 0.589972 | 6.4:-7325961 | None:intergenic |
| TTGTTTGCTGAAATTTGGGT+TGG | 0.591850 | 6.4:-7325733 | None:intergenic |
| GAGTAGATATAATGTGGTGG+AGG | 0.594587 | 6.4:-7326372 | None:intergenic |
| GGAGGTGGTGAGTAAGCAGG+AGG | 0.598069 | 6.4:-7326354 | None:intergenic |
| TTGTACTTGTAAACTGGTGG+AGG | 0.598373 | 6.4:-7326117 | None:intergenic |
| GACTTGTACTTGTAAACTGG+TGG | 0.601010 | 6.4:-7326120 | None:intergenic |
| GACTTATACTTGTAAACAGG+TGG | 0.601528 | 6.4:-7325865 | None:intergenic |
| GACTTATACTTGTAAACAGG+TGG | 0.601528 | 6.4:-7325916 | None:intergenic |
| ATTTAGTAGTGGTAAGGAGG+AGG | 0.602889 | 6.4:-7326402 | None:intergenic |
| TTATACTTGTAAACAGGTGG+AGG | 0.603042 | 6.4:-7325862 | None:intergenic |
| TTATACTTGTAAACAGGTGG+AGG | 0.603042 | 6.4:-7325913 | None:intergenic |
| GGAGGTGGTGAGTAGACGGG+TGG | 0.603335 | 6.4:-7326099 | None:intergenic |
| GGAGGTGGTGAGTAGACTGG+TGG | 0.605274 | 6.4:-7325895 | None:intergenic |
| TATTTGTATGGCTTAGACGG+TGG | 0.608405 | 6.4:-7325778 | None:intergenic |
| AGGTGGTGAGTAGACAGGTG+GGG | 0.609414 | 6.4:-7325842 | None:intergenic |
| CTTAGACGGTGGTGGTGGAG+AGG | 0.611270 | 6.4:-7325767 | None:intergenic |
| ACCATTTAGTAGTGGTAAGG+AGG | 0.618262 | 6.4:-7326405 | None:intergenic |
| TTGTATGGCTTAGACGGTGG+TGG | 0.620123 | 6.4:-7325775 | None:intergenic |
| TTGTAATTGTAAACTGGTGG+AGG | 0.624133 | 6.4:-7325964 | None:intergenic |
| CGTAAACCACCATTTAGTAG+TGG | 0.625237 | 6.4:-7326413 | None:intergenic |
| GGTGAAGAGTAGATATAATG+TGG | 0.631465 | 6.4:-7326378 | None:intergenic |
| GGAGGTGGTGAATAGACAGG+AGG | 0.632836 | 6.4:-7326303 | None:intergenic |
| GATTTATACTTGTAAACTGG+TGG | 0.644397 | 6.4:-7325814 | None:intergenic |
| GAAGAGTAGATATAATGTGG+TGG | 0.646587 | 6.4:-7326375 | None:intergenic |
| GACTTGTATTTGTAAAGTGG+TGG | 0.647845 | 6.4:-7326171 | None:intergenic |
| GACTTGTACTTGTAAACTGG+TGG | 0.657109 | 6.4:-7326069 | None:intergenic |
| GACTTGTACTTGTAAACTGG+GGG | 0.672160 | 6.4:-7326222 | None:intergenic |
| GACTTGTACTTGTAAACTGG+GGG | 0.672160 | 6.4:-7326273 | None:intergenic |
| TGACTTGTACTTGTAAACTG+GGG | 0.718901 | 6.4:-7326223 | None:intergenic |
| TGACTTGTACTTGTAAACTG+GGG | 0.718901 | 6.4:-7326274 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATTGTTTGCTGAAATTT+GGG | - | chr6.4:7325740-7325759 | None:intergenic | 25.0% |
| CAATGCAATAGTAAGAGTAA+TGG | - | chr6.4:7325692-7325711 | None:intergenic | 30.0% | |
| GATTTATACTTGTAAACTGG+TGG | - | chr6.4:7325817-7325836 | None:intergenic | 30.0% | |
| GGTGATTTATACTTGTAAAC+TGG | - | chr6.4:7325820-7325839 | None:intergenic | 30.0% | |
| ! | CGTAATTGTTTGCTGAAATT+TGG | - | chr6.4:7325741-7325760 | None:intergenic | 30.0% |
| GAAGAGTAGATATAATGTGG+TGG | - | chr6.4:7326378-7326397 | None:intergenic | 35.0% | |
| GACTTATACTTGTAAACAGG+TGG | - | chr6.4:7325868-7325887 | None:intergenic | 35.0% | |
| GACTTATACTTGTAAACTGG+TGG | - | chr6.4:7326327-7326346 | None:intergenic | 35.0% | |
| GACTTGTAATTGTAAACTGG+TGG | - | chr6.4:7325970-7325989 | None:intergenic | 35.0% | |
| GACTTGTATTTGTAAAGTGG+TGG | - | chr6.4:7326174-7326193 | None:intergenic | 35.0% | |
| GGAGACTTATACTTGTAAAC+TGG | - | chr6.4:7326330-7326349 | None:intergenic | 35.0% | |
| GGAGACTTGTATTTGTAAAG+TGG | - | chr6.4:7326177-7326196 | None:intergenic | 35.0% | |
| GGTGAAGAGTAGATATAATG+TGG | - | chr6.4:7326381-7326400 | None:intergenic | 35.0% | |
| GGTGACTTATACTTGTAAAC+AGG | - | chr6.4:7325871-7325890 | None:intergenic | 35.0% | |
| TGCAATAGTAAGAGTAATGG+AGG | - | chr6.4:7325689-7325708 | None:intergenic | 35.0% | |
| TTATACTTGTAAACAGGTGG+AGG | - | chr6.4:7325865-7325884 | None:intergenic | 35.0% | |
| TTATACTTGTAAACTGGTGG+AGG | - | chr6.4:7325814-7325833 | None:intergenic | 35.0% | |
| TTATACTTGTAAACTGGTGG+TGG | - | chr6.4:7325814-7325833 | None:intergenic | 35.0% | |
| TTGTAATTGTAAACTGGTGG+AGG | - | chr6.4:7325967-7325986 | None:intergenic | 35.0% | |
| TTGTATTTGTAAAGTGGTGG+TGG | - | chr6.4:7326171-7326190 | None:intergenic | 35.0% | |
| ! | GTGACTTGTACTTGTAAACT+GGG | - | chr6.4:7326227-7326246 | None:intergenic | 35.0% |
| ! | TGACTTGTACTTGTAAACTG+GGG | - | chr6.4:7326226-7326245 | None:intergenic | 35.0% |
| ! | TTGTTTGCTGAAATTTGGGT+TGG | - | chr6.4:7325736-7325755 | None:intergenic | 35.0% |
| GACTTGTACTTGTAAACTGG+GGG | - | chr6.4:7326021-7326040 | None:intergenic | 40.0% | |
| GACTTGTACTTGTAAACTGG+TGG | - | chr6.4:7326021-7326040 | None:intergenic | 40.0% | |
| GAGTAGATATAATGTGGTGG+AGG | - | chr6.4:7326375-7326394 | None:intergenic | 40.0% | |
| GCGTATTTGTATGGCTTAGA+CGG | - | chr6.4:7325784-7325803 | None:intergenic | 40.0% | |
| GGGGACTTGTAATTGTAAAC+TGG | - | chr6.4:7325973-7325992 | None:intergenic | 40.0% | |
| TAATTGTAAACTGGTGGAGG+TGG | - | chr6.4:7325964-7325983 | None:intergenic | 40.0% | |
| TATTTGTATGGCTTAGACGG+TGG | - | chr6.4:7325781-7325800 | None:intergenic | 40.0% | |
| TTGTACTTGTAAACTGGTGG+AGG | - | chr6.4:7326018-7326037 | None:intergenic | 40.0% | |
| TTGTACTTGTAAACTGGTGG+TGG | - | chr6.4:7326018-7326037 | None:intergenic | 40.0% | |
| ! | GGTGACTTGTACTTGTAAAC+TGG | - | chr6.4:7326228-7326247 | None:intergenic | 40.0% |
| ! | TAAGAGTAATGGAGGCCATT+TGG | - | chr6.4:7325681-7325700 | None:intergenic | 40.0% |
| ! | TAGATATAATGTGGTGGAGG+TGG | - | chr6.4:7326372-7326391 | None:intergenic | 40.0% |
| !! | TATTTGTAAAGTGGTGGTGG+TGG | - | chr6.4:7326168-7326187 | None:intergenic | 40.0% |
| GGGGACTTGTACTTGTAAAC+TGG | - | chr6.4:7326024-7326043 | None:intergenic | 45.0% | |
| TACTTGTAAACAGGTGGAGG+TGG | - | chr6.4:7325862-7325881 | None:intergenic | 45.0% | |
| TACTTGTAAACTGGTGGAGG+TGG | - | chr6.4:7326117-7326136 | None:intergenic | 45.0% | |
| TTGTACTTGTAAACTGGGGG+AGG | - | chr6.4:7326222-7326241 | None:intergenic | 45.0% | |
| !! | ACTTGTAAACTGGTGGTGGT+GGG | - | chr6.4:7325810-7325829 | None:intergenic | 45.0% |
| !! | TACTTGTAAACTGGTGGTGG+TGG | - | chr6.4:7325811-7325830 | None:intergenic | 45.0% |
| TACTTGTAAACTGGGGGAGG+TGG | - | chr6.4:7326219-7326238 | None:intergenic | 50.0% | |
| TAGTAGTGGTAAGGAGGAGG+TGG | - | chr6.4:7326402-7326421 | None:intergenic | 50.0% | |
| TTGTATGGCTTAGACGGTGG+TGG | - | chr6.4:7325778-7325797 | None:intergenic | 50.0% | |
| ! | GGTGGGGAAGCGTATTTGTA+TGG | - | chr6.4:7325793-7325812 | None:intergenic | 50.0% |
| !! | CTTGTAAACTGGTGGTGGTG+GGG | - | chr6.4:7325809-7325828 | None:intergenic | 50.0% |
| AGGTGGTGAGTAGACAGGTG+GGG | - | chr6.4:7325845-7325864 | None:intergenic | 55.0% | |
| GAGGTGGTGAGTAGACAGGT+GGG | - | chr6.4:7325846-7325865 | None:intergenic | 55.0% | |
| GGAGGTGGTGAATAGACAGG+AGG | - | chr6.4:7326306-7326325 | None:intergenic | 55.0% | |
| GGTGAATAGACAGGAGGAGG+TGG | - | chr6.4:7326300-7326319 | None:intergenic | 55.0% | |
| GGTGGAGGTGGTGAATAGAC+AGG | - | chr6.4:7326309-7326328 | None:intergenic | 55.0% | |
| GGTGGTGAATAGACAGGAGG+AGG | - | chr6.4:7326303-7326322 | None:intergenic | 55.0% | |
| TGGTGGAGGTGGTGAGTAGA+CGG | - | chr6.4:7325953-7325972 | None:intergenic | 55.0% | |
| ! | TATGGCTTAGACGGTGGTGG+TGG | - | chr6.4:7325775-7325794 | None:intergenic | 55.0% |
| !! | TGGTGGTGGTGGTGAGTAGA+CGG | - | chr6.4:7326004-7326023 | None:intergenic | 55.0% |
| GGAGGTGGTGAGTAAGCAGG+AGG | - | chr6.4:7326357-7326376 | None:intergenic | 60.0% | |
| GGAGGTGGTGAGTAGACAGG+TGG | - | chr6.4:7325847-7325866 | None:intergenic | 60.0% | |
| GGAGGTGGTGAGTAGACTGG+TGG | - | chr6.4:7325898-7325917 | None:intergenic | 60.0% | |
| GGTGAGTAAGCAGGAGGAGG+AGG | - | chr6.4:7326351-7326370 | None:intergenic | 60.0% | |
| GGTGAGTAGACAGGTGGAGG+TGG | - | chr6.4:7325943-7325962 | None:intergenic | 60.0% | |
| GGTGAGTAGACTGGTGGAGG+TGG | - | chr6.4:7325892-7325911 | None:intergenic | 60.0% | |
| GGTGGAGGTGGTGAGTAAGC+AGG | - | chr6.4:7326360-7326379 | None:intergenic | 60.0% | |
| GGTGGAGGTGGTGAGTAGAC+AGG | - | chr6.4:7325850-7325869 | None:intergenic | 60.0% | |
| GGTGGAGGTGGTGAGTAGAC+GGG | - | chr6.4:7325850-7325869 | None:intergenic | 60.0% | |
| GGTGGAGGTGGTGAGTAGAC+TGG | - | chr6.4:7325850-7325869 | None:intergenic | 60.0% | |
| GGTGGTGAGTAAGCAGGAGG+AGG | - | chr6.4:7326354-7326373 | None:intergenic | 60.0% | |
| GGTGGTGAGTAGACAGGTGG+AGG | - | chr6.4:7325844-7325863 | None:intergenic | 60.0% | |
| GGTGGTGAGTAGACAGGTGG+GGG | - | chr6.4:7325844-7325863 | None:intergenic | 60.0% | |
| GGTGGTGAGTAGACTGGTGG+AGG | - | chr6.4:7325895-7325914 | None:intergenic | 60.0% | |
| GTGAGTAGACGGGTGGAGGA+GGG | - | chr6.4:7326095-7326114 | None:intergenic | 60.0% | |
| GTGAGTAGACGGGTGGAGGT+GGG | - | chr6.4:7325993-7326012 | None:intergenic | 60.0% | |
| TGAGTAGACGGGTGGAGGAG+GGG | - | chr6.4:7326094-7326113 | None:intergenic | 60.0% | |
| TGAGTAGACGGGTGGAGGTG+GGG | - | chr6.4:7325992-7326011 | None:intergenic | 60.0% | |
| TGGGGGAGGTGGTGAGTAGA+CGG | - | chr6.4:7326208-7326227 | None:intergenic | 60.0% | |
| !! | CTTAGACGGTGGTGGTGGAG+AGG | - | chr6.4:7325770-7325789 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTGAGTAGAC+GGG | - | chr6.4:7326003-7326022 | None:intergenic | 60.0% |
| GGAGGTGGTGAGTAGACGGG+AGG | - | chr6.4:7326102-7326121 | None:intergenic | 65.0% | |
| GGAGGTGGTGAGTAGACGGG+TGG | - | chr6.4:7326102-7326121 | None:intergenic | 65.0% | |
| GGGGGAGGTGGTGAGTAGAC+GGG | - | chr6.4:7326207-7326226 | None:intergenic | 65.0% | |
| GGTGAGTAGACAGGTGGGGG+TGG | - | chr6.4:7325841-7325860 | None:intergenic | 65.0% | |
| GGTGAGTAGACGGGAGGAGG+TGG | - | chr6.4:7326249-7326268 | None:intergenic | 65.0% | |
| GGTGAGTAGACGGGTGGAGG+AGG | - | chr6.4:7325994-7326013 | None:intergenic | 65.0% | |
| GGTGAGTAGACGGGTGGAGG+TGG | - | chr6.4:7325994-7326013 | None:intergenic | 65.0% | |
| GGTGGTGAGTAGACGGGAGG+AGG | - | chr6.4:7326252-7326271 | None:intergenic | 65.0% | |
| GGTGGTGAGTAGACGGGTGG+AGG | - | chr6.4:7325997-7326016 | None:intergenic | 65.0% | |
| ! | GGTGGTGGTGAGTAGACGGG+TGG | - | chr6.4:7326000-7326019 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 7325670 | 7326422 | 7325670 | ID=MS.gene48182 |
| chr6.4 | mRNA | 7325670 | 7326422 | 7325670 | ID=MS.gene48182.t1;Parent=MS.gene48182 |
| chr6.4 | exon | 7325670 | 7326422 | 7325670 | ID=MS.gene48182.t1.exon1;Parent=MS.gene48182.t1 |
| chr6.4 | CDS | 7325670 | 7326422 | 7325670 | ID=cds.MS.gene48182.t1;Parent=MS.gene48182.t1 |
| Gene Sequence |
| Protein sequence |
