Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48617.t1 | XP_013455261.1 | 98.6 | 512 | 7 | 0 | 1 | 512 | 107 | 618 | 3.70E-289 | 1003.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48617.t1 | Q291H5 | 55.5 | 373 | 157 | 2 | 5 | 370 | 130 | 500 | 6.5e-117 | 422.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48617.t1 | A0A072UHZ4 | 98.6 | 512 | 7 | 0 | 1 | 512 | 107 | 618 | 2.7e-289 | 1003.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053226 | MS.gene48617 | 0.801019 | 1.10E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48617 | MS.gene025347 | PPI |
| MS.gene85145 | MS.gene48617 | PPI |
| MS.gene062116 | MS.gene48617 | PPI |
| MS.gene48617 | MS.gene76530 | PPI |
| MS.gene069865 | MS.gene48617 | PPI |
| MS.gene36347 | MS.gene48617 | PPI |
| MS.gene36348 | MS.gene48617 | PPI |
| MS.gene85342 | MS.gene48617 | PPI |
| MS.gene85146 | MS.gene48617 | PPI |
| MS.gene070139 | MS.gene48617 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48617.t1 | MTR_4g033210 | 98.633 | 512 | 7 | 0 | 1 | 512 | 107 | 618 | 0.0 | 1043 |
| MS.gene48617.t1 | MTR_5g021230 | 24.654 | 434 | 257 | 12 | 15 | 390 | 186 | 607 | 5.50e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48617.t1 | AT1G72090 | 67.451 | 510 | 136 | 5 | 1 | 509 | 119 | 599 | 0.0 | 699 |
| MS.gene48617.t1 | AT4G36390 | 24.823 | 423 | 246 | 14 | 7 | 369 | 207 | 617 | 2.71e-25 | 110 |
Find 103 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTGATAAGGCTCTTT+TGG | 0.133036 | 4.1:-67077839 | MS.gene48617:CDS |
| CCAATTAATGTTGGTTGTTT+AGG | 0.201753 | 4.1:-67081497 | MS.gene48617:CDS |
| CCTAAACAACCAACATTAAT+TGG | 0.244538 | 4.1:+67081497 | None:intergenic |
| AAGGCAAAGTGGAAAGAATT+TGG | 0.247160 | 4.1:-67079002 | MS.gene48617:CDS |
| GTCTTAGGTTTAGTGTTCTT+TGG | 0.248640 | 4.1:-67077771 | MS.gene48617:CDS |
| TTGCTTTATTAGTTTGTCTT+AGG | 0.260565 | 4.1:-67077786 | MS.gene48617:CDS |
| CTTCTCTTCACTACATTACT+TGG | 0.281180 | 4.1:+67079078 | None:intergenic |
| TTCAAGTGCTCAAGGATAAA+AGG | 0.293438 | 4.1:+67080854 | None:intergenic |
| TTTCCACAAGCACAAGATTC+TGG | 0.298964 | 4.1:+67078060 | None:intergenic |
| GATATAATATGTGGATTTCC+AGG | 0.335774 | 4.1:-67080583 | MS.gene48617:intron |
| TTCTGAGATTTCACAAGTCT+TGG | 0.354694 | 4.1:+67078086 | None:intergenic |
| ACCTGCGGCAAGAATGAAAA+AGG | 0.355796 | 4.1:-67079103 | MS.gene48617:CDS |
| CTGATGGAGTTAAAGAAATA+TGG | 0.362385 | 4.1:-67081192 | MS.gene48617:CDS |
| TTGCCTTCCATCCCAGAGTA+TGG | 0.378724 | 4.1:+67079018 | None:intergenic |
| CTGAACTGGCACATGCAAAA+AGG | 0.379014 | 4.1:+67080793 | None:intergenic |
| CAAAGACATTTGTCAATTCA+CGG | 0.382984 | 4.1:+67079052 | None:intergenic |
| CTGGAAGGGATCAGCATTGT+AGG | 0.383351 | 4.1:-67081779 | MS.gene48617:CDS |
| GAATCATTCACGCCATACTC+TGG | 0.389654 | 4.1:-67079030 | MS.gene48617:CDS |
| AGCTGGTAATTCTGCTACTA+AGG | 0.395120 | 4.1:+67080916 | None:intergenic |
| AAAGGAAGAATCTGCACAAA+AGG | 0.397088 | 4.1:-67077924 | MS.gene48617:CDS |
| GTTGTAGAGGAGACTTTAAA+AGG | 0.399227 | 4.1:-67081728 | MS.gene48617:CDS |
| ACCTTAACTGAGCTTGTGCC+GGG | 0.402416 | 4.1:-67080622 | MS.gene48617:CDS |
| TACAGTGTCCCTTGAATTGT+CGG | 0.404396 | 4.1:+67077999 | None:intergenic |
| CCTTCCCACAGATGTTATCT+TGG | 0.407575 | 4.1:+67078218 | None:intergenic |
| AGATTTCACAAGTCTTGGTT+TGG | 0.413329 | 4.1:+67078091 | None:intergenic |
| CAACAACGCGATCAATTTGC+TGG | 0.415734 | 4.1:+67081753 | None:intergenic |
| AAGCGCTGGCAATGTCTTAC+GGG | 0.416449 | 4.1:+67081685 | None:intergenic |
| AAGAAAGGAGCATGAGAAAG+TGG | 0.418448 | 4.1:-67077864 | MS.gene48617:CDS |
| AATAAACCACTAGTTGTTGC+TGG | 0.419430 | 4.1:-67081836 | MS.gene48617:CDS |
| CAAGCGCTGGCAATGTCTTA+CGG | 0.420275 | 4.1:+67081684 | None:intergenic |
| ACTAAGGCATTCAATAAAGT+TGG | 0.424272 | 4.1:+67080932 | None:intergenic |
| CCCCGGCACAAGCTCAGTTA+AGG | 0.435890 | 4.1:+67080621 | None:intergenic |
| GAACAAGCAGGTTCCTGCTC+AGG | 0.439630 | 4.1:-67078136 | MS.gene48617:CDS |
| TTGAGAAGACCGACAATTCA+AGG | 0.440687 | 4.1:-67078008 | MS.gene48617:CDS |
| AAAGTGGGACTTTGTTGATA+AGG | 0.441838 | 4.1:-67077848 | MS.gene48617:CDS |
| TTGGATGGATACTGAGGAAA+AGG | 0.450909 | 4.1:-67077942 | MS.gene48617:CDS |
| TTGCATGTGCCAGTTCAGTC+TGG | 0.452847 | 4.1:-67080788 | MS.gene48617:CDS |
| TCACATCTCGACTTCCTTGA+GGG | 0.467101 | 4.1:+67081807 | None:intergenic |
| AGTGAAGATACCGGAGCATA+TGG | 0.472936 | 4.1:-67081163 | MS.gene48617:intron |
| TACCTTAACTGAGCTTGTGC+CGG | 0.473023 | 4.1:-67080623 | MS.gene48617:CDS |
| GTATTCTTTAATGAGGTTGA+CGG | 0.481347 | 4.1:+67080176 | None:intergenic |
| ATGGATACCATCATAACAAA+AGG | 0.483104 | 4.1:-67081869 | MS.gene48617:CDS |
| GAACTTCCAAGCATATCATC+TGG | 0.486695 | 4.1:+67078249 | None:intergenic |
| GCAAGCACTATACTGCGTAT+TGG | 0.488769 | 4.1:-67080890 | MS.gene48617:CDS |
| GCATCACTTCCAGACTGAAC+TGG | 0.492471 | 4.1:+67080779 | None:intergenic |
| GATCTGATCTAAAGCAAGAA+AGG | 0.497761 | 4.1:-67077879 | MS.gene48617:CDS |
| AGAACTTGTATTCTTTAATG+AGG | 0.500678 | 4.1:+67080169 | None:intergenic |
| CTGAAGGTTGGTCATACAAA+GGG | 0.500724 | 4.1:-67078297 | MS.gene48617:intron |
| AGTATAGTGCTTGCATCAGC+TGG | 0.511098 | 4.1:+67080899 | None:intergenic |
| TTCACATCTCGACTTCCTTG+AGG | 0.511443 | 4.1:+67081806 | None:intergenic |
| TGCAACTGATGGAGTTCACT+TGG | 0.521540 | 4.1:-67078968 | MS.gene48617:intron |
| ATTGCCACTGATATAATATG+TGG | 0.524293 | 4.1:-67080592 | MS.gene48617:CDS |
| GAGCCAGAATCTTGTGCTTG+TGG | 0.529123 | 4.1:-67078063 | MS.gene48617:CDS |
| AATCATTCACGCCATACTCT+GGG | 0.529461 | 4.1:-67079029 | MS.gene48617:CDS |
| AAGTCGAGATGTGAAAGAGC+TGG | 0.532706 | 4.1:-67081798 | MS.gene48617:CDS |
| ATTACTGATATTGCAACTGA+TGG | 0.536300 | 4.1:-67078979 | MS.gene48617:CDS |
| CAATAAAGCTTTGAACAAGC+AGG | 0.540064 | 4.1:-67078148 | MS.gene48617:CDS |
| CTTTAAAAGGTCACGAAGTG+AGG | 0.543654 | 4.1:-67081715 | MS.gene48617:CDS |
| CTATCTCTTTCAAGTGCTCA+AGG | 0.546786 | 4.1:+67080846 | None:intergenic |
| TATCTATTGTGTAACTCCCT+AGG | 0.546949 | 4.1:+67081435 | None:intergenic |
| ATTTGTTTGGATGGATACTG+AGG | 0.551888 | 4.1:-67077948 | MS.gene48617:CDS |
| GTAGAAAGTGAACTTGCCTC+AGG | 0.554829 | 4.1:-67077901 | MS.gene48617:CDS |
| CTCTGGGATGGAAGGCAAAG+TGG | 0.556380 | 4.1:-67079013 | MS.gene48617:CDS |
| GAAATTCTTCCAATTAATGT+TGG | 0.561561 | 4.1:-67081506 | MS.gene48617:CDS |
| AAGGAAGAATCTGCACAAAA+GGG | 0.564610 | 4.1:-67077923 | MS.gene48617:CDS |
| ACCTTTGGAAGGTCAAGCGC+TGG | 0.566270 | 4.1:+67081671 | None:intergenic |
| GGTTTGCTCAAAATCTTCAT+CGG | 0.566371 | 4.1:+67080197 | None:intergenic |
| GTTGCTGGCTGTGTCCCTCA+AGG | 0.566523 | 4.1:-67081821 | MS.gene48617:CDS |
| ACGCCATACTCTGGGATGGA+AGG | 0.569239 | 4.1:-67079021 | MS.gene48617:CDS |
| GTAAAATCTGTGGTATCTGA+TGG | 0.573159 | 4.1:-67081208 | MS.gene48617:CDS |
| CGAGATGTGAAAGAGCTGGA+AGG | 0.575668 | 4.1:-67081794 | MS.gene48617:CDS |
| TTTGAATTCACACCTTTGGA+AGG | 0.575915 | 4.1:+67081660 | None:intergenic |
| TCAGTGGCAATCTGCATCCC+CGG | 0.575983 | 4.1:+67080604 | None:intergenic |
| TTAGAAATTACCATATGCTC+CGG | 0.576298 | 4.1:+67081153 | None:intergenic |
| ATTGCTCCAGATGATATGCT+TGG | 0.577406 | 4.1:-67078255 | MS.gene48617:CDS |
| TATGCTTGGAAGTTCAGCTC+TGG | 0.580362 | 4.1:-67078241 | MS.gene48617:CDS |
| AAACATGCTCGAGGTCACCT+AGG | 0.587931 | 4.1:-67081452 | MS.gene48617:CDS |
| AGAGAAGACATATCCTGAGC+AGG | 0.587947 | 4.1:+67078123 | None:intergenic |
| TCGCGTTGTTGAAGTTGTAG+AGG | 0.590773 | 4.1:-67081741 | MS.gene48617:CDS |
| CCAGAACACACACCTGGTCG+AGG | 0.591497 | 4.1:+67080120 | None:intergenic |
| GAGATGTGAAAGAGCTGGAA+GGG | 0.591544 | 4.1:-67081793 | MS.gene48617:CDS |
| TGAGAAGACCGACAATTCAA+GGG | 0.600489 | 4.1:-67078007 | MS.gene48617:CDS |
| CTGGCCAAGATAACATCTGT+GGG | 0.605676 | 4.1:-67078222 | MS.gene48617:CDS |
| AAGTGCTCAAGGATAAAAGG+TGG | 0.609787 | 4.1:+67080857 | None:intergenic |
| AGATAACATCTGTGGGAAGG+TGG | 0.611853 | 4.1:-67078215 | MS.gene48617:CDS |
| AACATGCTCGAGGTCACCTA+GGG | 0.613729 | 4.1:-67081451 | MS.gene48617:CDS |
| ATTCACGCCATACTCTGGGA+TGG | 0.613962 | 4.1:-67079025 | MS.gene48617:CDS |
| AGAAAGGAGCATGAGAAAGT+GGG | 0.617963 | 4.1:-67077863 | MS.gene48617:CDS |
| GCTGAAGGTTGGTCATACAA+AGG | 0.618455 | 4.1:-67078298 | MS.gene48617:intron |
| TTGCTTTAGATCAGATCCTG+AGG | 0.623187 | 4.1:+67077885 | None:intergenic |
| AAATCCACATATTATATCAG+TGG | 0.624202 | 4.1:+67080588 | None:intergenic |
| CCAAGATAACATCTGTGGGA+AGG | 0.625892 | 4.1:-67078218 | MS.gene48617:CDS |
| TCTGGCCAAGATAACATCTG+TGG | 0.625993 | 4.1:-67078223 | MS.gene48617:CDS |
| GCACTTGAAAGAGATAGCAG+AGG | 0.626453 | 4.1:-67080840 | MS.gene48617:CDS |
| GCCAGCGCTTGACCTTCCAA+AGG | 0.629616 | 4.1:-67081672 | MS.gene48617:intron |
| ACACAGCCAGCAACAACTAG+TGG | 0.634478 | 4.1:+67081830 | None:intergenic |
| TGGCTGAGCAGTGAAGATAC+CGG | 0.637316 | 4.1:-67081172 | MS.gene48617:CDS |
| ATGAATCGAGAATATACTGT+GGG | 0.644518 | 4.1:-67080667 | MS.gene48617:CDS |
| CCTTAACTGAGCTTGTGCCG+GGG | 0.671188 | 4.1:-67080621 | MS.gene48617:CDS |
| TGCAAGACAAAACATGCTCG+AGG | 0.679994 | 4.1:-67081461 | MS.gene48617:CDS |
| GGTTGGGCGTGTAAAATCTG+TGG | 0.710077 | 4.1:-67081218 | MS.gene48617:CDS |
| AATGAATCGAGAATATACTG+TGG | 0.719912 | 4.1:-67080668 | MS.gene48617:CDS |
| AAAATGAATAGGGACACCTG+CGG | 0.776532 | 4.1:-67079118 | MS.gene48617:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTCCATTAATATT+AGG | - | chr4.1:67080735-67080754 | MS.gene48617:intron | 10.0% |
| !! | ATATTAATGAAAAAATGAAT+AGG | - | chr4.1:67080502-67080521 | MS.gene48617:intron | 10.0% |
| !! | ATTAAATAACATAATACATA+TGG | + | chr4.1:67078042-67078061 | None:intergenic | 10.0% |
| !! | TATTAATGAAAAAATGAATA+GGG | - | chr4.1:67080503-67080522 | MS.gene48617:intron | 10.0% |
| !!! | ATAAACATTTTTCTAATTTT+TGG | - | chr4.1:67079953-67079972 | MS.gene48617:intron | 10.0% |
| !! | ATGTATGAAAAAAATATCTA+CGG | - | chr4.1:67081067-67081086 | MS.gene48617:intron | 15.0% |
| !! | TAATATAATGCATTCATTTA+TGG | - | chr4.1:67081278-67081297 | MS.gene48617:intron | 15.0% |
| !!! | ATTTTTTTTCTTGCAATAAA+AGG | - | chr4.1:67079706-67079725 | MS.gene48617:intron | 15.0% |
| !!! | CAAAATAACAAAAATTTGTT+TGG | - | chr4.1:67081670-67081689 | MS.gene48617:intron | 15.0% |
| !!! | TTTTATTGCAAGAAAAAAAA+TGG | + | chr4.1:67079707-67079726 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTGCAATAAAA+GGG | - | chr4.1:67079707-67079726 | MS.gene48617:intron | 15.0% |
| !! | AACTGATGAAATCTTATAAT+TGG | - | chr4.1:67079237-67079256 | MS.gene48617:intron | 20.0% |
| !! | CATATGGTAATTTCTAATAT+TGG | - | chr4.1:67078484-67078503 | MS.gene48617:intron | 20.0% |
| !! | GTTGTATCATTAACAAAAAA+AGG | + | chr4.1:67080005-67080024 | None:intergenic | 20.0% |
| !!! | AAATCATAACTTCGTTTTTT+AGG | - | chr4.1:67079550-67079569 | MS.gene48617:intron | 20.0% |
| !!! | ATAACAAAAATTTGTTTGGA+TGG | - | chr4.1:67081674-67081693 | MS.gene48617:CDS | 20.0% |
| !!! | TATGATAGTATTTTTTAGTC+AGG | + | chr4.1:67079936-67079955 | None:intergenic | 20.0% |
| !!! | TATTCTTTCTTTTGTTTTTC+TGG | - | chr4.1:67079658-67079677 | MS.gene48617:intron | 20.0% |
| !!! | TATTTTTTTCATACATCCAA+CGG | + | chr4.1:67081063-67081082 | None:intergenic | 20.0% |
| !!! | TCTTATTCATAAGCTATTTT+AGG | - | chr4.1:67080263-67080282 | MS.gene48617:intron | 20.0% |
| !!! | TTTTTGTTATTTTGATTCTG+TGG | + | chr4.1:67081664-67081683 | None:intergenic | 20.0% |
| ! | AAATCCACATATTATATCAG+TGG | + | chr4.1:67079046-67079065 | None:intergenic | 25.0% |
| ! | AGAACTTGTATTCTTTAATG+AGG | + | chr4.1:67079465-67079484 | None:intergenic | 25.0% |
| ! | ATATTGTCAGTTTGAAGATA+AGG | + | chr4.1:67080486-67080505 | None:intergenic | 25.0% |
| ! | ATTGATATAGATAATCTGGA+TGG | - | chr4.1:67079351-67079370 | MS.gene48617:intron | 25.0% |
| ! | GAAAAATCCTTACAATACTA+TGG | - | chr4.1:67078893-67078912 | MS.gene48617:intron | 25.0% |
| ! | GAAATTCTTCCAATTAATGT+TGG | - | chr4.1:67078125-67078144 | MS.gene48617:CDS | 25.0% |
| ! | GGTAAATAGTTAACAGTTTA+CGG | - | chr4.1:67080204-67080223 | MS.gene48617:CDS | 25.0% |
| ! | GTAGATATTGAATCATGATT+TGG | - | chr4.1:67080698-67080717 | MS.gene48617:intron | 25.0% |
| ! | TATTAATTCATCACTAATGC+AGG | - | chr4.1:67078392-67078411 | MS.gene48617:intron | 25.0% |
| ! | TCCATTAATATTAGGATTTG+TGG | - | chr4.1:67080743-67080762 | MS.gene48617:intron | 25.0% |
| ! | TGGAATTGATATAGATAATC+TGG | - | chr4.1:67079347-67079366 | MS.gene48617:intron | 25.0% |
| ! | TTAATTCTATGTGCAACAAA+TGG | - | chr4.1:67079108-67079127 | MS.gene48617:CDS | 25.0% |
| ! | TTAGTAACTATTCAAAAGGA+AGG | + | chr4.1:67079877-67079896 | None:intergenic | 25.0% |
| ! | TTTGTTTAAATAGTTGCCAT+CGG | - | chr4.1:67080150-67080169 | MS.gene48617:CDS | 25.0% |
| !! | ATTTTCCATACAAAATGAAC+AGG | + | chr4.1:67078009-67078028 | None:intergenic | 25.0% |
| !! | TAATTCCTGTTCATTTTGTA+TGG | - | chr4.1:67078001-67078020 | MS.gene48617:CDS | 25.0% |
| !! | TCATACTAACACTTATTTCT+TGG | - | chr4.1:67079395-67079414 | MS.gene48617:intron | 25.0% |
| !!! | AATGTTTTGATGTTGAGTTT+TGG | - | chr4.1:67078614-67078633 | MS.gene48617:intron | 25.0% |
| !!! | AGATTTTCCTTTTGTTATGA+TGG | + | chr4.1:67077772-67077791 | None:intergenic | 25.0% |
| !!! | GAGTTTTGGTTTTATATCAA+TGG | - | chr4.1:67078628-67078647 | MS.gene48617:intron | 25.0% |
| !!! | TTGCTTTATTAGTTTGTCTT+AGG | - | chr4.1:67081845-67081864 | MS.gene48617:CDS | 25.0% |
| !!! | TTGGTGGCATTAATTTTATT+TGG | + | chr4.1:67079737-67079756 | None:intergenic | 25.0% |
| AATGAATCGAGAATATACTG+TGG | - | chr4.1:67078963-67078982 | MS.gene48617:intron | 30.0% | |
| AGCACATGATTAAAATGATC+TGG | - | chr4.1:67079327-67079346 | MS.gene48617:intron | 30.0% | |
| ATAAAATTAATGCCACCAAC+AGG | - | chr4.1:67079738-67079757 | MS.gene48617:intron | 30.0% | |
| ATGAATCGAGAATATACTGT+GGG | - | chr4.1:67078964-67078983 | MS.gene48617:intron | 30.0% | |
| ATGGATACCATCATAACAAA+AGG | - | chr4.1:67077762-67077781 | MS.gene48617:CDS | 30.0% | |
| ATGTATATGCACTAGTCAAA+AGG | + | chr4.1:67078573-67078592 | None:intergenic | 30.0% | |
| ATTACTGATATTGCAACTGA+TGG | - | chr4.1:67080652-67080671 | MS.gene48617:CDS | 30.0% | |
| ATTGCCACTGATATAATATG+TGG | - | chr4.1:67079039-67079058 | MS.gene48617:CDS | 30.0% | |
| CAAAGACATTTGTCAATTCA+CGG | + | chr4.1:67080582-67080601 | None:intergenic | 30.0% | |
| CCTAAACAACCAACATTAAT+TGG | + | chr4.1:67078137-67078156 | None:intergenic | 30.0% | |
| CCTCTTAGTAACTATTCAAA+AGG | + | chr4.1:67079881-67079900 | None:intergenic | 30.0% | |
| CTCTTGAATTTGTGAATAAG+AGG | - | chr4.1:67079145-67079164 | MS.gene48617:intron | 30.0% | |
| CTGATGGAGTTAAAGAAATA+TGG | - | chr4.1:67078439-67078458 | MS.gene48617:intron | 30.0% | |
| GATATAATATGTGGATTTCC+AGG | - | chr4.1:67079048-67079067 | MS.gene48617:CDS | 30.0% | |
| GCAACGAAAAAGATATTATG+CGG | - | chr4.1:67079975-67079994 | MS.gene48617:intron | 30.0% | |
| GCCACAAATCCTAATATTAA+TGG | + | chr4.1:67080747-67080766 | None:intergenic | 30.0% | |
| GGGTTTCAACAAAATAATCA+CGG | + | chr4.1:67080772-67080791 | None:intergenic | 30.0% | |
| GTATTCTTTAATGAGGTTGA+CGG | + | chr4.1:67079458-67079477 | None:intergenic | 30.0% | |
| GTGATGAATTAATAGATGTG+AGG | + | chr4.1:67078386-67078405 | None:intergenic | 30.0% | |
| TAACTATTCAAAAGGAAGGA+TGG | + | chr4.1:67079873-67079892 | None:intergenic | 30.0% | |
| TCATCATCCATAGTATTGTA+AGG | + | chr4.1:67078903-67078922 | None:intergenic | 30.0% | |
| TCGAAAAACATTGTGACTAT+CGG | + | chr4.1:67080920-67080939 | None:intergenic | 30.0% | |
| TGGTATAAAATACTAGTGCA+TGG | - | chr4.1:67079371-67079390 | MS.gene48617:intron | 30.0% | |
| TGTATATGCACTAGTCAAAA+GGG | + | chr4.1:67078572-67078591 | None:intergenic | 30.0% | |
| TGTTGAGAAAAAAGAAAGAG+AGG | - | chr4.1:67081151-67081170 | MS.gene48617:intron | 30.0% | |
| TGTTGCACATAGAATTAAGA+AGG | + | chr4.1:67079106-67079125 | None:intergenic | 30.0% | |
| TTAGAAATTACCATATGCTC+CGG | + | chr4.1:67078481-67078500 | None:intergenic | 30.0% | |
| TTGTTTAAATAGTTGCCATC+GGG | - | chr4.1:67080151-67080170 | MS.gene48617:CDS | 30.0% | |
| ! | AATTTTCTCTTCAATGCTGA+AGG | - | chr4.1:67081318-67081337 | MS.gene48617:intron | 30.0% |
| ! | ACAGTATTTGAGACTTTAGT+TGG | - | chr4.1:67080943-67080962 | MS.gene48617:CDS | 30.0% |
| ! | ACTAAGGCATTCAATAAAGT+TGG | + | chr4.1:67078702-67078721 | None:intergenic | 30.0% |
| ! | CCAATTAATGTTGGTTGTTT+AGG | - | chr4.1:67078134-67078153 | MS.gene48617:CDS | 30.0% |
| ! | CCTTTTGAATAGTTACTAAG+AGG | - | chr4.1:67079878-67079897 | MS.gene48617:intron | 30.0% |
| ! | CTTAGATCATGATGTTTTAC+AGG | - | chr4.1:67078654-67078673 | MS.gene48617:intron | 30.0% |
| ! | TAAAAAATTTCCTGCCACTT+TGG | + | chr4.1:67080814-67080833 | None:intergenic | 30.0% |
| ! | TATTTGAGACTTTAGTTGGT+TGG | - | chr4.1:67080947-67080966 | MS.gene48617:CDS | 30.0% |
| ! | TCACTACTAAAGTACTTACA+AGG | + | chr4.1:67078223-67078242 | None:intergenic | 30.0% |
| ! | TTATCATGCATTTTTACCGT+TGG | - | chr4.1:67081044-67081063 | MS.gene48617:intron | 30.0% |
| ! | TTTTGCATAACCTAATTGCT+TGG | + | chr4.1:67078596-67078615 | None:intergenic | 30.0% |
| !! | TTTGTTGATAAGGCTCTTTT+GGG | - | chr4.1:67081793-67081812 | MS.gene48617:CDS | 30.0% |
| !!! | CTTTCTTTTGTTTTTCTGGA+GGG | - | chr4.1:67079662-67079681 | MS.gene48617:intron | 30.0% |
| !!! | CTTTCTTTTTTCTCAACAAG+AGG | + | chr4.1:67081149-67081168 | None:intergenic | 30.0% |
| !!! | TCTTTCTTTTGTTTTTCTGG+AGG | - | chr4.1:67079661-67079680 | MS.gene48617:intron | 30.0% |
| !!! | TTTCTTTTGTTTTTCTGGAG+GGG | - | chr4.1:67079663-67079682 | MS.gene48617:intron | 30.0% |
| !!! | TTTTAGGATGAAACTGATGT+AGG | - | chr4.1:67079566-67079585 | MS.gene48617:intron | 30.0% |
| AAAAGAAAGAGAGGTTGTGA+TGG | - | chr4.1:67081160-67081179 | MS.gene48617:intron | 35.0% | |
| AAACCTCTACGATAGTTTAG+AGG | - | chr4.1:67079593-67079612 | MS.gene48617:intron | 35.0% | |
| AAAGAAAGAGAGGTTGTGAT+GGG | - | chr4.1:67081161-67081180 | MS.gene48617:intron | 35.0% | |
| AAAGGAAGAATCTGCACAAA+AGG | - | chr4.1:67081707-67081726 | MS.gene48617:CDS | 35.0% | |
| AAAGTGGGACTTTGTTGATA+AGG | - | chr4.1:67081783-67081802 | MS.gene48617:CDS | 35.0% | |
| AAGGAAGAATCTGCACAAAA+GGG | - | chr4.1:67081708-67081727 | MS.gene48617:CDS | 35.0% | |
| AAGGCAAAGTGGAAAGAATT+TGG | - | chr4.1:67080629-67080648 | MS.gene48617:CDS | 35.0% | |
| AATAAACCACTAGTTGTTGC+TGG | - | chr4.1:67077795-67077814 | MS.gene48617:CDS | 35.0% | |
| AATTCATCACTAATGCAGGT+TGG | - | chr4.1:67078396-67078415 | MS.gene48617:intron | 35.0% | |
| ACCTAAGATGAAGAGATTAG+GGG | + | chr4.1:67080052-67080071 | None:intergenic | 35.0% | |
| AGATTTCACAAGTCTTGGTT+TGG | + | chr4.1:67081543-67081562 | None:intergenic | 35.0% | |
| ATAAGCATCTTACACAAAGG+GGG | + | chr4.1:67080427-67080446 | None:intergenic | 35.0% | |
| ATATTCTCGATTCATTGCCT+GGG | + | chr4.1:67078959-67078978 | None:intergenic | 35.0% | |
| ATTCATCACTAATGCAGGTT+GGG | - | chr4.1:67078397-67078416 | MS.gene48617:intron | 35.0% | |
| ATTTGTTTGGATGGATACTG+AGG | - | chr4.1:67081683-67081702 | MS.gene48617:CDS | 35.0% | |
| CAAGTTTGAATTCACACCTT+TGG | + | chr4.1:67077978-67077997 | None:intergenic | 35.0% | |
| CACCAACAGGACTTAATATT+AGG | - | chr4.1:67079751-67079770 | MS.gene48617:intron | 35.0% | |
| CACCTAAGATGAAGAGATTA+GGG | + | chr4.1:67080053-67080072 | None:intergenic | 35.0% | |
| CATAAGCATCTTACACAAAG+GGG | + | chr4.1:67080428-67080447 | None:intergenic | 35.0% | |
| CGAAAAACATTGTGACTATC+GGG | + | chr4.1:67080919-67080938 | None:intergenic | 35.0% | |
| CTAATATTAAGTCCTGTTGG+TGG | + | chr4.1:67079753-67079772 | None:intergenic | 35.0% | |
| CTTCTCTTCACTACATTACT+TGG | + | chr4.1:67080556-67080575 | None:intergenic | 35.0% | |
| GCAGGTTCATGACAATTAAA+GGG | + | chr4.1:67080792-67080811 | None:intergenic | 35.0% | |
| GCATAAGCATCTTACACAAA+GGG | + | chr4.1:67080429-67080448 | None:intergenic | 35.0% | |
| GCATATACATCCAAGCAATT+AGG | - | chr4.1:67078583-67078602 | MS.gene48617:intron | 35.0% | |
| GTAAAATCTGTGGTATCTGA+TGG | - | chr4.1:67078423-67078442 | MS.gene48617:intron | 35.0% | |
| GTCTTAGGTTTAGTGTTCTT+TGG | - | chr4.1:67081860-67081879 | MS.gene48617:CDS | 35.0% | |
| GTTGTAGAGGAGACTTTAAA+AGG | - | chr4.1:67077903-67077922 | MS.gene48617:CDS | 35.0% | |
| TATATTCTCGATTCATTGCC+TGG | + | chr4.1:67078960-67078979 | None:intergenic | 35.0% | |
| TATCTATTGTGTAACTCCCT+AGG | + | chr4.1:67078199-67078218 | None:intergenic | 35.0% | |
| TCACCTAAGATGAAGAGATT+AGG | + | chr4.1:67080054-67080073 | None:intergenic | 35.0% | |
| TGCAAAAAGGAGTAAACACA+TGG | + | chr4.1:67078828-67078847 | None:intergenic | 35.0% | |
| TGCCTAATATTAAGTCCTGT+TGG | + | chr4.1:67079756-67079775 | None:intergenic | 35.0% | |
| TTAATATTCACTACCTCCCA+TGG | - | chr4.1:67081115-67081134 | MS.gene48617:intron | 35.0% | |
| TTCAAGTGCTCAAGGATAAA+AGG | + | chr4.1:67078780-67078799 | None:intergenic | 35.0% | |
| TTCTTTCTCACCTGTTACAA+AGG | + | chr4.1:67078095-67078114 | None:intergenic | 35.0% | |
| TTGACTAATCTGAATATCCC+AGG | - | chr4.1:67078939-67078958 | MS.gene48617:intron | 35.0% | |
| TTGTAAGTGTACTCAAACAC+TGG | - | chr4.1:67080335-67080354 | MS.gene48617:intron | 35.0% | |
| TTTGAATTCACACCTTTGGA+AGG | + | chr4.1:67077974-67077993 | None:intergenic | 35.0% | |
| ! | AAGAGATAGCAGAGGTTTTA+CGG | - | chr4.1:67078799-67078818 | MS.gene48617:intron | 35.0% |
| ! | GGTTTGCTCAAAATCTTCAT+CGG | + | chr4.1:67079437-67079456 | None:intergenic | 35.0% |
| !! | CAATAAAGCTTTGAACAAGC+AGG | - | chr4.1:67081483-67081502 | MS.gene48617:CDS | 35.0% |
| !! | CTTATTTCTTGGCCTTTTTC+AGG | - | chr4.1:67079406-67079425 | MS.gene48617:intron | 35.0% |
| !! | CTTTGTTGATAAGGCTCTTT+TGG | - | chr4.1:67081792-67081811 | MS.gene48617:CDS | 35.0% |
| !! | GCCTACTCACTTGTTATAAA+GGG | - | chr4.1:67079834-67079853 | MS.gene48617:intron | 35.0% |
| !! | TGCCTACTCACTTGTTATAA+AGG | - | chr4.1:67079833-67079852 | MS.gene48617:intron | 35.0% |
| !! | TTCTGAGATTTCACAAGTCT+TGG | + | chr4.1:67081548-67081567 | None:intergenic | 35.0% |
| !!! | CTTTCAGTTCCACTTTTTCT+AGG | - | chr4.1:67079800-67079819 | MS.gene48617:intron | 35.0% |
| !!! | TTCTTTTGTTTTTCTGGAGG+GGG | - | chr4.1:67079664-67079683 | MS.gene48617:intron | 35.0% |
| AAAATGAATAGGGACACCTG+CGG | - | chr4.1:67080513-67080532 | MS.gene48617:intron | 40.0% | |
| AAGTGCTCAAGGATAAAAGG+TGG | + | chr4.1:67078777-67078796 | None:intergenic | 40.0% | |
| AATAAAGACCACCACTAACC+TGG | + | chr4.1:67079069-67079088 | None:intergenic | 40.0% | |
| AATCATTCACGCCATACTCT+GGG | - | chr4.1:67080602-67080621 | MS.gene48617:CDS | 40.0% | |
| AATGAACGTAAGATACCCTC+TGG | + | chr4.1:67080451-67080470 | None:intergenic | 40.0% | |
| ACGATAGCACCTAGAAAAAG+TGG | + | chr4.1:67079812-67079831 | None:intergenic | 40.0% | |
| AGAAGTCACATGTTCAGAGT+AGG | + | chr4.1:67081255-67081274 | None:intergenic | 40.0% | |
| AGCTGGTAATTCTGCTACTA+AGG | + | chr4.1:67078718-67078737 | None:intergenic | 40.0% | |
| ATTGCTCCAGATGATATGCT+TGG | - | chr4.1:67081376-67081395 | MS.gene48617:intron | 40.0% | |
| CACCTGTTACAAAGGTTGAA+AGG | + | chr4.1:67078087-67078106 | None:intergenic | 40.0% | |
| GAACTTCCAAGCATATCATC+TGG | + | chr4.1:67081385-67081404 | None:intergenic | 40.0% | |
| GAGATTAGGGGAGGAAAAAA+AGG | + | chr4.1:67080040-67080059 | None:intergenic | 40.0% | |
| GCCCTTTATAACAAGTGAGT+AGG | + | chr4.1:67079838-67079857 | None:intergenic | 40.0% | |
| GGCAGGTTCATGACAATTAA+AGG | + | chr4.1:67080793-67080812 | None:intergenic | 40.0% | |
| GGCATAAGCATCTTACACAA+AGG | + | chr4.1:67080430-67080449 | None:intergenic | 40.0% | |
| TAAGATGAAGAGATTAGGGG+AGG | + | chr4.1:67080049-67080068 | None:intergenic | 40.0% | |
| TACAGTGTCCCTTGAATTGT+CGG | + | chr4.1:67081635-67081654 | None:intergenic | 40.0% | |
| TACTCTGAACATGTGACTTC+TGG | - | chr4.1:67081254-67081273 | MS.gene48617:intron | 40.0% | |
| TATGTGGATTTCCAGGTTAG+TGG | - | chr4.1:67079055-67079074 | MS.gene48617:CDS | 40.0% | |
| TCACATGTGTGTGATATGTG+AGG | + | chr4.1:67078348-67078367 | None:intergenic | 40.0% | |
| TCCCCTAATCTCTTCATCTT+AGG | - | chr4.1:67080048-67080067 | MS.gene48617:intron | 40.0% | |
| TCTACGATAGTTTAGAGGCA+AGG | - | chr4.1:67079598-67079617 | MS.gene48617:intron | 40.0% | |
| TGAGAAGACCGACAATTCAA+GGG | - | chr4.1:67081624-67081643 | MS.gene48617:intron | 40.0% | |
| TGCCTTTCAACCTTTGTAAC+AGG | - | chr4.1:67078082-67078101 | MS.gene48617:CDS | 40.0% | |
| TGTAAGATGCTTATGCCAGA+GGG | - | chr4.1:67080433-67080452 | MS.gene48617:intron | 40.0% | |
| TGTTCATGCACAGAACCTAT+TGG | + | chr4.1:67079634-67079653 | None:intergenic | 40.0% | |
| TTCTCTTCAATGCTGAAGGT+TGG | - | chr4.1:67081322-67081341 | MS.gene48617:intron | 40.0% | |
| TTGAGAAGACCGACAATTCA+AGG | - | chr4.1:67081623-67081642 | MS.gene48617:intron | 40.0% | |
| TTGCCTCTAAACTATCGTAG+AGG | + | chr4.1:67079599-67079618 | None:intergenic | 40.0% | |
| TTGGATGGATACTGAGGAAA+AGG | - | chr4.1:67081689-67081708 | MS.gene48617:CDS | 40.0% | |
| TTTCCACAAGCACAAGATTC+TGG | + | chr4.1:67081574-67081593 | None:intergenic | 40.0% | |
| ! | AAGAAAGGAGCATGAGAAAG+TGG | - | chr4.1:67081767-67081786 | MS.gene48617:CDS | 40.0% |
| ! | AGAAAGGAGCATGAGAAAGT+GGG | - | chr4.1:67081768-67081787 | MS.gene48617:CDS | 40.0% |
| ! | AGTTTAGAGGCAAGGTATCT+TGG | - | chr4.1:67079606-67079625 | MS.gene48617:intron | 40.0% |
| ! | CTATCTCTTTCAAGTGCTCA+AGG | + | chr4.1:67078788-67078807 | None:intergenic | 40.0% |
| ! | CTGAAGGTTGGTCATACAAA+GGG | - | chr4.1:67081334-67081353 | MS.gene48617:intron | 40.0% |
| ! | CTTTAAAAGGTCACGAAGTG+AGG | - | chr4.1:67077916-67077935 | MS.gene48617:CDS | 40.0% |
| ! | TCACAATTTTATCCTCGACC+AGG | - | chr4.1:67079499-67079518 | MS.gene48617:intron | 40.0% |
| ! | TGTTTTACAGGTCGTGACAT+TGG | - | chr4.1:67078666-67078685 | MS.gene48617:intron | 40.0% |
| !! | AGATTTTGATGCGCAGGTTA+GGG | - | chr4.1:67081092-67081111 | MS.gene48617:intron | 40.0% |
| !! | TCATCGGTTTCACCTGAAAA+AGG | + | chr4.1:67079421-67079440 | None:intergenic | 40.0% |
| !!! | TCTTTTGTTTTTCTGGAGGG+GGG | - | chr4.1:67079665-67079684 | MS.gene48617:intron | 40.0% |
| AAGTCGAGATGTGAAAGAGC+TGG | - | chr4.1:67077833-67077852 | MS.gene48617:CDS | 45.0% | |
| ACCTGCGGCAAGAATGAAAA+AGG | - | chr4.1:67080528-67080547 | MS.gene48617:intron | 45.0% | |
| AGAGAAGACATATCCTGAGC+AGG | + | chr4.1:67081511-67081530 | None:intergenic | 45.0% | |
| AGATAACATCTGTGGGAAGG+TGG | - | chr4.1:67081416-67081435 | MS.gene48617:intron | 45.0% | |
| AGTATAGTGCTTGCATCAGC+TGG | + | chr4.1:67078735-67078754 | None:intergenic | 45.0% | |
| AGTGAAGATACCGGAGCATA+TGG | - | chr4.1:67078468-67078487 | MS.gene48617:intron | 45.0% | |
| CAACAACGCGATCAATTTGC+TGG | + | chr4.1:67077881-67077900 | None:intergenic | 45.0% | |
| CAGACCATCCAAACTCTATG+GGG | + | chr4.1:67080184-67080203 | None:intergenic | 45.0% | |
| CCAAGATAACATCTGTGGGA+AGG | - | chr4.1:67081413-67081432 | MS.gene48617:intron | 45.0% | |
| CCAGACCATCCAAACTCTAT+GGG | + | chr4.1:67080185-67080204 | None:intergenic | 45.0% | |
| CCATAGAGTTTGGATGGTCT+GGG | - | chr4.1:67080183-67080202 | MS.gene48617:CDS | 45.0% | |
| CCTCACATTTCACACACATG+CGG | - | chr4.1:67078307-67078326 | MS.gene48617:intron | 45.0% | |
| CCTTCCCACAGATGTTATCT+TGG | + | chr4.1:67081416-67081435 | None:intergenic | 45.0% | |
| CTCACATTTCACACACATGC+GGG | - | chr4.1:67078308-67078327 | MS.gene48617:intron | 45.0% | |
| CTGAACTGGCACATGCAAAA+AGG | + | chr4.1:67078841-67078860 | None:intergenic | 45.0% | |
| CTGATGGAGTTCACTTGGTA+AGG | - | chr4.1:67080668-67080687 | MS.gene48617:CDS | 45.0% | |
| CTGGCCAAGATAACATCTGT+GGG | - | chr4.1:67081409-67081428 | MS.gene48617:intron | 45.0% | |
| GAATCATTCACGCCATACTC+TGG | - | chr4.1:67080601-67080620 | MS.gene48617:CDS | 45.0% | |
| GAGATGTGAAAGAGCTGGAA+GGG | - | chr4.1:67077838-67077857 | MS.gene48617:CDS | 45.0% | |
| GCAAGCACTATACTGCGTAT+TGG | - | chr4.1:67078741-67078760 | MS.gene48617:intron | 45.0% | |
| GCACTTGAAAGAGATAGCAG+AGG | - | chr4.1:67078791-67078810 | MS.gene48617:intron | 45.0% | |
| GTAGAAAGTGAACTTGCCTC+AGG | - | chr4.1:67081730-67081749 | MS.gene48617:CDS | 45.0% | |
| GTGTAAGATGCTTATGCCAG+AGG | - | chr4.1:67080432-67080451 | MS.gene48617:intron | 45.0% | |
| GTTCTCCAATAGCATAGCCA+TGG | - | chr4.1:67080974-67080993 | MS.gene48617:intron | 45.0% | |
| TACCTTAACTGAGCTTGTGC+CGG | - | chr4.1:67079008-67079027 | MS.gene48617:CDS | 45.0% | |
| TATGCTTGGAAGTTCAGCTC+TGG | - | chr4.1:67081390-67081409 | MS.gene48617:intron | 45.0% | |
| TCACATCTCGACTTCCTTGA+GGG | + | chr4.1:67077827-67077846 | None:intergenic | 45.0% | |
| TCGCGTTGTTGAAGTTGTAG+AGG | - | chr4.1:67077890-67077909 | MS.gene48617:CDS | 45.0% | |
| TCTGGCCAAGATAACATCTG+TGG | - | chr4.1:67081408-67081427 | MS.gene48617:intron | 45.0% | |
| TGCAACTGATGGAGTTCACT+TGG | - | chr4.1:67080663-67080682 | MS.gene48617:CDS | 45.0% | |
| TGCAAGACAAAACATGCTCG+AGG | - | chr4.1:67078170-67078189 | MS.gene48617:CDS | 45.0% | |
| TGTGCGCAAATTTGTGCAAG+AGG | + | chr4.1:67078273-67078292 | None:intergenic | 45.0% | |
| TTCACATCTCGACTTCCTTG+AGG | + | chr4.1:67077828-67077847 | None:intergenic | 45.0% | |
| TTGTCATGAACCTGCCAAAG+TGG | - | chr4.1:67080797-67080816 | MS.gene48617:CDS | 45.0% | |
| ! | CAAGGTATCTTGGCTCCAAT+AGG | - | chr4.1:67079616-67079635 | MS.gene48617:intron | 45.0% |
| ! | GCTGAAGGTTGGTCATACAA+AGG | - | chr4.1:67081333-67081352 | MS.gene48617:intron | 45.0% |
| ! | TGGGAAGGTGGTCAGTTTTT+GGG | - | chr4.1:67081428-67081447 | MS.gene48617:intron | 45.0% |
| !! | AAATTTCCTGCCACTTTGGC+AGG | + | chr4.1:67080810-67080829 | None:intergenic | 45.0% |
| !! | ACCTTTTTCATTCTTGCCGC+AGG | + | chr4.1:67080532-67080551 | None:intergenic | 45.0% |
| !! | CAGATTTTGATGCGCAGGTT+AGG | - | chr4.1:67081091-67081110 | MS.gene48617:intron | 45.0% |
| !! | GTTGATAAGGCTCTTTTGGG+TGG | - | chr4.1:67081796-67081815 | MS.gene48617:CDS | 45.0% |
| !!! | TATGTTATTTAATTTAATTT+GGG | - | chr4.1:67078049-67078068 | MS.gene48617:CDS | 5.0% |
| !!! | TTATGTTATTTAATTTAATT+TGG | - | chr4.1:67078048-67078067 | MS.gene48617:CDS | 5.0% |
| AAACATGCTCGAGGTCACCT+AGG | - | chr4.1:67078179-67078198 | MS.gene48617:CDS | 50.0% | |
| AACATGCTCGAGGTCACCTA+GGG | - | chr4.1:67078180-67078199 | MS.gene48617:CDS | 50.0% | |
| AAGGCCCCATAGAGTTTGGA+TGG | - | chr4.1:67080177-67080196 | MS.gene48617:CDS | 50.0% | |
| AATAGTTGCCATCGGGCCAA+AGG | - | chr4.1:67080158-67080177 | MS.gene48617:CDS | 50.0% | |
| ACACAGCCAGCAACAACTAG+TGG | + | chr4.1:67077804-67077823 | None:intergenic | 50.0% | |
| ACCAAAGAGAGGGTGGTGTA+GGG | + | chr4.1:67081203-67081222 | None:intergenic | 50.0% | |
| ACCTTAACTGAGCTTGTGCC+GGG | - | chr4.1:67079009-67079028 | MS.gene48617:CDS | 50.0% | |
| CCCAGACCATCCAAACTCTA+TGG | + | chr4.1:67080186-67080205 | None:intergenic | 50.0% | |
| CCCATAGAGTTTGGATGGTC+TGG | - | chr4.1:67080182-67080201 | MS.gene48617:CDS | 50.0% | |
| CCGCATGTGTGTGAAATGTG+AGG | + | chr4.1:67078310-67078329 | None:intergenic | 50.0% | |
| CGAGATGTGAAAGAGCTGGA+AGG | - | chr4.1:67077837-67077856 | MS.gene48617:CDS | 50.0% | |
| CTGGAAGGGATCAGCATTGT+AGG | - | chr4.1:67077852-67077871 | MS.gene48617:CDS | 50.0% | |
| GAGCCAGAATCTTGTGCTTG+TGG | - | chr4.1:67081568-67081587 | MS.gene48617:intron | 50.0% | |
| GCAGTCACTCACCAAAGAGA+GGG | + | chr4.1:67081213-67081232 | None:intergenic | 50.0% | |
| GCATCACTTCCAGACTGAAC+TGG | + | chr4.1:67078855-67078874 | None:intergenic | 50.0% | |
| GGTTGGGCGTGTAAAATCTG+TGG | - | chr4.1:67078413-67078432 | MS.gene48617:intron | 50.0% | |
| GTGGATTTCCAGGTTAGTGG+TGG | - | chr4.1:67079058-67079077 | MS.gene48617:CDS | 50.0% | |
| TCCAAACTCTATGGGGCCTT+TGG | + | chr4.1:67080177-67080196 | None:intergenic | 50.0% | |
| TGGCTGAGCAGTGAAGATAC+CGG | - | chr4.1:67078459-67078478 | MS.gene48617:intron | 50.0% | |
| TTGCATGTGCCAGTTCAGTC+TGG | - | chr4.1:67078843-67078862 | MS.gene48617:intron | 50.0% | |
| TTGCCTTCCATCCCAGAGTA+TGG | + | chr4.1:67080616-67080635 | None:intergenic | 50.0% | |
| ! | ATTCACGCCATACTCTGGGA+TGG | - | chr4.1:67080606-67080625 | MS.gene48617:CDS | 50.0% |
| ! | GAAAGAGAGGTTGTGATGGG+AGG | - | chr4.1:67081164-67081183 | MS.gene48617:CDS | 50.0% |
| ! | GGGAAGGTGGTCAGTTTTTG+GGG | - | chr4.1:67081429-67081448 | MS.gene48617:intron | 50.0% |
| ! | GTGGGAAGGTGGTCAGTTTT+TGG | - | chr4.1:67081427-67081446 | MS.gene48617:intron | 50.0% |
| ! | TTCTGGAGGGGGGAAGATTT+AGG | - | chr4.1:67079675-67079694 | MS.gene48617:intron | 50.0% |
| !! | AAGCGCTGGCAATGTCTTAC+GGG | + | chr4.1:67077949-67077968 | None:intergenic | 50.0% |
| !! | ACGGTCAGATTTTGATGCGC+AGG | - | chr4.1:67081086-67081105 | MS.gene48617:intron | 50.0% |
| !! | CAAGCGCTGGCAATGTCTTA+CGG | + | chr4.1:67077950-67077969 | None:intergenic | 50.0% |
| AACAAGAGGCCCTGAGACCA+TGG | + | chr4.1:67081135-67081154 | None:intergenic | 55.0% | |
| ACAAGAGGCCCTGAGACCAT+GGG | + | chr4.1:67081134-67081153 | None:intergenic | 55.0% | |
| ACATCCTAGACAGCACCCTC+CGG | + | chr4.1:67081001-67081020 | None:intergenic | 55.0% | |
| CACCAAAGAGAGGGTGGTGT+AGG | + | chr4.1:67081204-67081223 | None:intergenic | 55.0% | |
| CACTACCTCCCATGGTCTCA+GGG | - | chr4.1:67081123-67081142 | MS.gene48617:intron | 55.0% | |
| CATGAACCTGCCAAAGTGGC+AGG | - | chr4.1:67080801-67080820 | MS.gene48617:CDS | 55.0% | |
| CCAATAGCATAGCCATGGCC+CGG | - | chr4.1:67080979-67080998 | MS.gene48617:intron | 55.0% | |
| CCTTAACTGAGCTTGTGCCG+GGG | - | chr4.1:67079010-67079029 | MS.gene48617:CDS | 55.0% | |
| CGCAGTCACTCACCAAAGAG+AGG | + | chr4.1:67081214-67081233 | None:intergenic | 55.0% | |
| GAACAAGCAGGTTCCTGCTC+AGG | - | chr4.1:67081495-67081514 | MS.gene48617:CDS | 55.0% | |
| GATGTGCCAGAACACACACC+TGG | + | chr4.1:67079520-67079539 | None:intergenic | 55.0% | |
| GCCAAAGGCCCCATAGAGTT+TGG | - | chr4.1:67080173-67080192 | MS.gene48617:CDS | 55.0% | |
| GTCACTCACCAAAGAGAGGG+TGG | + | chr4.1:67081210-67081229 | None:intergenic | 55.0% | |
| TCACTACCTCCCATGGTCTC+AGG | - | chr4.1:67081122-67081141 | MS.gene48617:intron | 55.0% | |
| TCAGTGGCAATCTGCATCCC+CGG | + | chr4.1:67079030-67079049 | None:intergenic | 55.0% | |
| TCCCTACACCACCCTCTCTT+TGG | - | chr4.1:67081199-67081218 | MS.gene48617:CDS | 55.0% | |
| ! | ACCTTTGGAAGGTCAAGCGC+TGG | + | chr4.1:67077963-67077982 | None:intergenic | 55.0% |
| !! | ACGCCATACTCTGGGATGGA+AGG | - | chr4.1:67080610-67080629 | MS.gene48617:CDS | 55.0% |
| !! | CTCTGGGATGGAAGGCAAAG+TGG | - | chr4.1:67080618-67080637 | MS.gene48617:CDS | 55.0% |
| !! | GAGGGTGCTGTCTAGGATGT+GGG | - | chr4.1:67081001-67081020 | MS.gene48617:intron | 55.0% |
| ATAGCATAGCCATGGCCCGG+AGG | - | chr4.1:67080982-67081001 | MS.gene48617:intron | 60.0% | |
| CATCCTAGACAGCACCCTCC+GGG | + | chr4.1:67081000-67081019 | None:intergenic | 60.0% | |
| CCAGAACACACACCTGGTCG+AGG | + | chr4.1:67079514-67079533 | None:intergenic | 60.0% | |
| CCCCGGCACAAGCTCAGTTA+AGG | + | chr4.1:67079013-67079032 | None:intergenic | 60.0% | |
| CCGGGCCATGGCTATGCTAT+TGG | + | chr4.1:67080982-67081001 | None:intergenic | 60.0% | |
| CCTCGACCAGGTGTGTGTTC+TGG | - | chr4.1:67079511-67079530 | MS.gene48617:intron | 60.0% | |
| GCCAGCGCTTGACCTTCCAA+AGG | - | chr4.1:67077959-67077978 | MS.gene48617:CDS | 60.0% | |
| TAGCATAGCCATGGCCCGGA+GGG | - | chr4.1:67080983-67081002 | MS.gene48617:intron | 60.0% | |
| ! | GTTGCTGGCTGTGTCCCTCA+AGG | - | chr4.1:67077810-67077829 | MS.gene48617:CDS | 60.0% |
| !! | GGAGGGTGCTGTCTAGGATG+TGG | - | chr4.1:67081000-67081019 | MS.gene48617:intron | 60.0% |
| AGAGGCCCTGAGACCATGGG+AGG | + | chr4.1:67081131-67081150 | None:intergenic | 65.0% | |
| CTATGGGGCCTTTGGCCCGA+TGG | + | chr4.1:67080169-67080188 | None:intergenic | 65.0% | |
| AGACAGCACCCTCCGGGCCA+TGG | + | chr4.1:67080994-67081013 | None:intergenic | 70.0% | |
| !! | TGGCCCGGAGGGTGCTGTCT+AGG | - | chr4.1:67080994-67081013 | MS.gene48617:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 67077762 | 67081891 | 67077762 | ID=MS.gene48617 |
| chr4.1 | mRNA | 67077762 | 67081891 | 67077762 | ID=MS.gene48617.t1;Parent=MS.gene48617 |
| chr4.1 | exon | 67081673 | 67081891 | 67081673 | ID=MS.gene48617.t1.exon1;Parent=MS.gene48617.t1 |
| chr4.1 | CDS | 67081673 | 67081891 | 67081673 | ID=cds.MS.gene48617.t1;Parent=MS.gene48617.t1 |
| chr4.1 | exon | 67081430 | 67081549 | 67081430 | ID=MS.gene48617.t1.exon2;Parent=MS.gene48617.t1 |
| chr4.1 | CDS | 67081430 | 67081549 | 67081430 | ID=cds.MS.gene48617.t1;Parent=MS.gene48617.t1 |
| chr4.1 | exon | 67081164 | 67081239 | 67081164 | ID=MS.gene48617.t1.exon3;Parent=MS.gene48617.t1 |
| chr4.1 | CDS | 67081164 | 67081239 | 67081164 | ID=cds.MS.gene48617.t1;Parent=MS.gene48617.t1 |
| chr4.1 | exon | 67080769 | 67080977 | 67080769 | ID=MS.gene48617.t1.exon4;Parent=MS.gene48617.t1 |
| chr4.1 | CDS | 67080769 | 67080977 | 67080769 | ID=cds.MS.gene48617.t1;Parent=MS.gene48617.t1 |
| chr4.1 | exon | 67080584 | 67080692 | 67080584 | ID=MS.gene48617.t1.exon5;Parent=MS.gene48617.t1 |
| chr4.1 | CDS | 67080584 | 67080692 | 67080584 | ID=cds.MS.gene48617.t1;Parent=MS.gene48617.t1 |
| chr4.1 | exon | 67080133 | 67080225 | 67080133 | ID=MS.gene48617.t1.exon6;Parent=MS.gene48617.t1 |
| chr4.1 | CDS | 67080133 | 67080225 | 67080133 | ID=cds.MS.gene48617.t1;Parent=MS.gene48617.t1 |
| chr4.1 | exon | 67078969 | 67079129 | 67078969 | ID=MS.gene48617.t1.exon7;Parent=MS.gene48617.t1 |
| chr4.1 | CDS | 67078969 | 67079129 | 67078969 | ID=cds.MS.gene48617.t1;Parent=MS.gene48617.t1 |
| chr4.1 | exon | 67077762 | 67078313 | 67077762 | ID=MS.gene48617.t1.exon8;Parent=MS.gene48617.t1 |
| chr4.1 | CDS | 67077762 | 67078313 | 67077762 | ID=cds.MS.gene48617.t1;Parent=MS.gene48617.t1 |
| Gene Sequence |
| Protein sequence |
