Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49099.t1 | XP_003592284.1 | 100 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 3.10E-263 | 917.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49099.t1 | P37392 | 97.8 | 447 | 9 | 1 | 1 | 447 | 1 | 446 | 7.9e-260 | 897.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49099.t1 | G7IAN2 | 100.0 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 2.2e-263 | 917.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49099 | MS.gene014419 | PPI |
| MS.gene49099 | MS.gene025926 | PPI |
| MS.gene49099 | MS.gene42253 | PPI |
| MS.gene49099 | MS.gene050630 | PPI |
| MS.gene49099 | MS.gene22813 | PPI |
| MS.gene064762 | MS.gene49099 | PPI |
| MS.gene35118 | MS.gene49099 | PPI |
| MS.gene49099 | MS.gene013972 | PPI |
| MS.gene49099 | MS.gene028342 | PPI |
| MS.gene49099 | MS.gene69396 | PPI |
| MS.gene49099 | MS.gene58838 | PPI |
| MS.gene49099 | MS.gene017695 | PPI |
| MS.gene49099 | MS.gene36449 | PPI |
| MS.gene49099 | MS.gene024462 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49099.t1 | MTR_1g101130 | 100.000 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 0.0 | 946 |
| MS.gene49099.t1 | MTR_7g089120 | 96.413 | 446 | 15 | 1 | 1 | 446 | 1 | 445 | 0.0 | 905 |
| MS.gene49099.t1 | MTR_4g019090 | 97.674 | 430 | 10 | 0 | 1 | 430 | 1 | 430 | 0.0 | 863 |
| MS.gene49099.t1 | MTR_4g019110 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 857 |
| MS.gene49099.t1 | MTR_2g031310 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 850 |
| MS.gene49099.t1 | MTR_4g017630 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 847 |
| MS.gene49099.t1 | MTR_4g094535 | 95.116 | 430 | 21 | 0 | 1 | 430 | 1 | 430 | 0.0 | 843 |
| MS.gene49099.t1 | MTR_3g113970 | 93.287 | 432 | 27 | 1 | 1 | 430 | 1 | 432 | 0.0 | 830 |
| MS.gene49099.t1 | MTR_8g107250 | 91.422 | 443 | 37 | 1 | 1 | 442 | 1 | 443 | 0.0 | 827 |
| MS.gene49099.t1 | MTR_8g098360 | 91.628 | 430 | 36 | 0 | 1 | 430 | 1 | 430 | 0.0 | 818 |
| MS.gene49099.t1 | MTR_8g085980 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 5.91e-124 | 368 |
| MS.gene49099.t1 | MTR_3g110720 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.71e-123 | 367 |
| MS.gene49099.t1 | MTR_4g097830 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 6.15e-123 | 365 |
| MS.gene49099.t1 | MTR_1g106005 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 7.79e-122 | 362 |
| MS.gene49099.t1 | MTR_6g029190 | 40.402 | 448 | 256 | 2 | 1 | 437 | 1 | 448 | 1.04e-121 | 362 |
| MS.gene49099.t1 | MTR_7g085800 | 40.553 | 434 | 248 | 2 | 1 | 424 | 1 | 434 | 1.15e-121 | 362 |
| MS.gene49099.t1 | MTR_2g041670 | 36.807 | 451 | 272 | 4 | 1 | 442 | 1 | 447 | 1.07e-98 | 304 |
| MS.gene49099.t1 | MTR_7g117050 | 35.160 | 438 | 267 | 7 | 2 | 423 | 3 | 439 | 9.72e-97 | 299 |
| MS.gene49099.t1 | MTR_2g041400 | 37.002 | 427 | 256 | 4 | 1 | 418 | 1 | 423 | 8.14e-95 | 292 |
| MS.gene49099.t1 | MTR_3g063410 | 33.784 | 148 | 90 | 1 | 256 | 395 | 30 | 177 | 3.75e-28 | 110 |
| MS.gene49099.t1 | MTR_3g063410 | 31.852 | 135 | 84 | 1 | 269 | 395 | 4 | 138 | 3.98e-21 | 90.1 |
| MS.gene49099.t1 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 377 | 405 | 1 | 29 | 8.20e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49099.t1 | AT5G23860 | 98.218 | 449 | 7 | 1 | 1 | 448 | 1 | 449 | 0.0 | 927 |
| MS.gene49099.t1 | AT5G23860 | 98.218 | 449 | 7 | 1 | 1 | 448 | 1 | 449 | 0.0 | 927 |
| MS.gene49099.t1 | AT5G62700 | 97.105 | 449 | 11 | 2 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| MS.gene49099.t1 | AT5G62690 | 97.105 | 449 | 11 | 2 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| MS.gene49099.t1 | AT2G29550 | 96.752 | 431 | 14 | 0 | 1 | 431 | 1 | 431 | 0.0 | 855 |
| MS.gene49099.t1 | AT5G12250 | 96.977 | 430 | 13 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| MS.gene49099.t1 | AT1G75780 | 94.200 | 431 | 24 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| MS.gene49099.t1 | AT1G20010 | 93.735 | 431 | 26 | 1 | 1 | 430 | 1 | 431 | 0.0 | 835 |
| MS.gene49099.t1 | AT4G20890 | 93.488 | 430 | 28 | 0 | 1 | 430 | 1 | 430 | 0.0 | 829 |
| MS.gene49099.t1 | AT5G44340 | 92.558 | 430 | 32 | 0 | 1 | 430 | 1 | 430 | 0.0 | 823 |
| MS.gene49099.t1 | AT5G19780 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 3.80e-124 | 368 |
| MS.gene49099.t1 | AT5G19770 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 3.80e-124 | 368 |
| MS.gene49099.t1 | AT1G64740 | 41.014 | 434 | 246 | 2 | 1 | 424 | 1 | 434 | 1.29e-123 | 367 |
| MS.gene49099.t1 | AT4G14960 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 2.13e-122 | 364 |
| MS.gene49099.t1 | AT1G04820 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.45e-121 | 362 |
| MS.gene49099.t1 | AT1G50010 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.45e-121 | 362 |
| MS.gene49099.t1 | AT4G14960 | 41.710 | 386 | 215 | 2 | 1 | 376 | 1 | 386 | 9.13e-103 | 313 |
| MS.gene49099.t1 | AT3G61650 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 5.00e-97 | 300 |
| MS.gene49099.t1 | AT5G05620 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 5.17e-97 | 300 |
Find 127 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGGAGTAGTGAGTTTA+AGG | 0.176825 | 1.3:+69235269 | None:intergenic |
| GCACACAACTTCCCAGAATT+TGG | 0.196817 | 1.3:+69236868 | None:intergenic |
| ACCAAATCGGAGCCAAATTC+TGG | 0.224594 | 1.3:-69236880 | MS.gene49099:CDS |
| TCCTCGTTTGCATTTCTTCA+TGG | 0.242828 | 1.3:-69235007 | MS.gene49099:CDS |
| GCTTTCTTGCATTGGTATAC+TGG | 0.248415 | 1.3:-69234610 | MS.gene49099:CDS |
| ACCTTTCGCCCAGTTGTTTC+CGG | 0.265804 | 1.3:+69236631 | None:intergenic |
| CTTGGTGGTGGTACTGGTTC+TGG | 0.275474 | 1.3:-69235496 | MS.gene49099:CDS |
| CCCTCCAACGGGTCTTAAAA+TGG | 0.284288 | 1.3:-69234719 | MS.gene49099:CDS |
| CATCTATTCAAGAGATGTTT+AGG | 0.286556 | 1.3:-69234672 | MS.gene49099:CDS |
| GAACTCAGATCTTCGCAAAT+TGG | 0.295990 | 1.3:-69235049 | MS.gene49099:CDS |
| AGATGAGGAGGAAGAAGTTC+AGG | 0.309205 | 1.3:-69234473 | MS.gene49099:CDS |
| CACTCCCTTGGTGGTGGTAC+TGG | 0.316198 | 1.3:-69235502 | MS.gene49099:CDS |
| CGCCCAGTTGTTTCCGGCAC+CGG | 0.324024 | 1.3:+69236637 | None:intergenic |
| CAGTAGCATCTTGGTATTGC+TGG | 0.336251 | 1.3:+69234521 | None:intergenic |
| GGATCTGGAGCCAGGGACTA+TGG | 0.339312 | 1.3:-69236723 | MS.gene49099:CDS |
| GACAGTGGATTTCACATTGT+TGG | 0.341115 | 1.3:+69234750 | None:intergenic |
| GTTCTCATGGATCTGGAGCC+AGG | 0.354959 | 1.3:-69236731 | MS.gene49099:CDS |
| CCCAGAATTTGGCTCCGATT+TGG | 0.356984 | 1.3:+69236879 | None:intergenic |
| GGTGGTACTGGTTCTGGAAT+GGG | 0.369152 | 1.3:-69235490 | MS.gene49099:CDS |
| AGTCCGGTGCCGGAAACAAC+TGG | 0.370377 | 1.3:-69236640 | MS.gene49099:CDS |
| GAGAATTGTGATTGTCTTCA+AGG | 0.384367 | 1.3:-69236548 | MS.gene49099:intron |
| TGCTGATGAATGCATGGTTC+TGG | 0.393880 | 1.3:-69235326 | MS.gene49099:CDS |
| ACAGTGGATTTCACATTGTT+GGG | 0.397830 | 1.3:+69234751 | None:intergenic |
| TCATTGTGGCAGAAATTAGA+TGG | 0.400520 | 1.3:+69235109 | None:intergenic |
| GGTTCCCGCATTGTCCTCCT+TGG | 0.410215 | 1.3:+69236900 | None:intergenic |
| TCTTCGAATCCCACATCTGC+TGG | 0.411088 | 1.3:+69234917 | None:intergenic |
| TAGAGCTGTTCTCATGGATC+TGG | 0.416476 | 1.3:-69236738 | MS.gene49099:CDS |
| CAGGTTTGCCACTCCCTTGG+TGG | 0.418895 | 1.3:-69235511 | MS.gene49099:CDS |
| CGTTTGCATTTCTTCATGGT+GGG | 0.424005 | 1.3:-69235003 | MS.gene49099:CDS |
| ACATGCTGTCTTCGTTTCCC+TGG | 0.428251 | 1.3:-69235078 | MS.gene49099:CDS |
| TTTCAGGTTTGCCACTCCCT+TGG | 0.428262 | 1.3:-69235514 | MS.gene49099:CDS |
| CTCTGTGTTCCCATCTCCTA+AGG | 0.428985 | 1.3:-69235410 | MS.gene49099:CDS |
| GTTGTTCCCTTGGTACCTTC+CGG | 0.430541 | 1.3:+69236823 | None:intergenic |
| TGGTGGTACTGGTTCTGGAA+TGG | 0.433580 | 1.3:-69235491 | MS.gene49099:CDS |
| AAAGTAAGCATCATTCGATC+AGG | 0.435587 | 1.3:+69235433 | None:intergenic |
| GTTGAAGATCGTTGTTCCCT+TGG | 0.436500 | 1.3:+69236813 | None:intergenic |
| CTCGTGGTTCACAGCAGTAC+AGG | 0.444979 | 1.3:-69234963 | MS.gene49099:CDS |
| GCTTGGAGTAGTGAGTTTAA+GGG | 0.448732 | 1.3:+69235270 | None:intergenic |
| ATTCGGTGCTTGATGTTGTT+AGG | 0.449556 | 1.3:-69236580 | MS.gene49099:CDS |
| GTCTGTGATATCCCTCCAAC+GGG | 0.450003 | 1.3:-69234730 | MS.gene49099:CDS |
| AAGAAATGCAAACGAGGAAA+AGG | 0.462260 | 1.3:+69235012 | None:intergenic |
| GCAGAAAAGCTTTCTTGCAT+TGG | 0.466464 | 1.3:-69234618 | MS.gene49099:CDS |
| CTTCATCTGCAGTAGCATCT+TGG | 0.477927 | 1.3:+69234512 | None:intergenic |
| CGTTCCTAGAGCTGTTCTCA+TGG | 0.485327 | 1.3:-69236744 | MS.gene49099:CDS |
| CCAAATCGGAGCCAAATTCT+GGG | 0.486989 | 1.3:-69236879 | MS.gene49099:CDS |
| CATCTGCTCATCAACCTCCT+TGG | 0.489308 | 1.3:+69234819 | None:intergenic |
| TGGAGAGGGTATGGATGAGA+TGG | 0.489491 | 1.3:-69234590 | MS.gene49099:CDS |
| TTGGTATACTGGAGAGGGTA+TGG | 0.494465 | 1.3:-69234599 | MS.gene49099:CDS |
| GTTTGCCACTCCCTTGGTGG+TGG | 0.498542 | 1.3:-69235508 | MS.gene49099:CDS |
| CTGAGCTTACCCAGCAGATG+TGG | 0.498814 | 1.3:-69234927 | MS.gene49099:CDS |
| TTCTCATGGATCTGGAGCCA+GGG | 0.504140 | 1.3:-69236730 | MS.gene49099:CDS |
| GTGTCAGATACCTTAGGAGA+TGG | 0.506140 | 1.3:+69235400 | None:intergenic |
| GAAGTTGTGTGCGCTGAGCA+CGG | 0.506720 | 1.3:-69236857 | MS.gene49099:CDS |
| GGCCGGAAAATCTGACCGTA+TGG | 0.507200 | 1.3:+69236683 | None:intergenic |
| GGACAATGCGGGAACCAAAT+CGG | 0.507915 | 1.3:-69236893 | MS.gene49099:CDS |
| AGGAGCTGAGTTGATTGATT+CGG | 0.521449 | 1.3:-69236597 | MS.gene49099:CDS |
| ATTCATCATACTTTGTTGAG+TGG | 0.522858 | 1.3:-69234777 | MS.gene49099:CDS |
| ACTATGGATAGCGTCAGATC+TGG | 0.524723 | 1.3:-69236707 | MS.gene49099:CDS |
| GTCAAATAACGACCGTGGCG+AGG | 0.525061 | 1.3:+69234874 | None:intergenic |
| TGAGGAGGAAGAAGTTCAGG+AGG | 0.525475 | 1.3:-69234470 | MS.gene49099:CDS |
| TTGCATTGGTATACTGGAGA+GGG | 0.526307 | 1.3:-69234604 | MS.gene49099:CDS |
| GGGGTATGACTATGAAGATG+AGG | 0.526329 | 1.3:-69234488 | MS.gene49099:CDS |
| CATCAGCATTCTCAACAAGT+TGG | 0.528768 | 1.3:+69235341 | None:intergenic |
| ACAGAGAGTGTAGCATTGTA+AGG | 0.528991 | 1.3:+69235367 | None:intergenic |
| TCGTTTGCATTTCTTCATGG+TGG | 0.530295 | 1.3:-69235004 | MS.gene49099:CDS |
| AGATCTGAGTTCAATTGACC+AGG | 0.531971 | 1.3:+69235060 | None:intergenic |
| CACATCTGCTGGGTAAGCTC+AGG | 0.532539 | 1.3:+69234928 | None:intergenic |
| ACAACAGTGTCAGATACCTT+AGG | 0.533881 | 1.3:+69235394 | None:intergenic |
| GGTGCTTGATGTTGTTAGGA+AGG | 0.544190 | 1.3:-69236576 | MS.gene49099:CDS |
| AAGTTGTGTGCGCTGAGCAC+GGG | 0.549539 | 1.3:-69236856 | MS.gene49099:CDS |
| AGCGTCAGATCTGGTCCATA+CGG | 0.552062 | 1.3:-69236698 | MS.gene49099:CDS |
| TACTACAACGAAGCGAGTTG+TGG | 0.552610 | 1.3:-69236773 | MS.gene49099:CDS |
| GCCGGAAACAACTGGGCGAA+AGG | 0.556278 | 1.3:-69236632 | MS.gene49099:CDS |
| AAACATCTCTTGAATAGATG+TGG | 0.557833 | 1.3:+69234675 | None:intergenic |
| GAGGGTAAGTGAGCAATTCA+CGG | 0.558270 | 1.3:-69234650 | MS.gene49099:CDS |
| GAGTAGTGAGTTTAAGGGTG+CGG | 0.561131 | 1.3:+69235275 | None:intergenic |
| AGATGCTACTGCAGATGAAG+AGG | 0.562679 | 1.3:-69234509 | MS.gene49099:CDS |
| ACATCCAAGGAGGACAATGC+GGG | 0.563147 | 1.3:-69236904 | MS.gene49099:CDS |
| CTTGCATTGGTATACTGGAG+AGG | 0.565550 | 1.3:-69234605 | MS.gene49099:CDS |
| CTAATTTCTGCCACAATGAG+TGG | 0.566664 | 1.3:-69235105 | MS.gene49099:CDS |
| TGTCTGTGATATCCCTCCAA+CGG | 0.567543 | 1.3:-69234731 | MS.gene49099:CDS |
| AGATCCATGAGAACAGCTCT+AGG | 0.569536 | 1.3:+69236740 | None:intergenic |
| GTATGACTATGAAGATGAGG+AGG | 0.571612 | 1.3:-69234485 | MS.gene49099:CDS |
| CAGCATTCTCAACAAGTTGG+TGG | 0.573199 | 1.3:+69235344 | None:intergenic |
| CTTCGAATCCCACATCTGCT+GGG | 0.574995 | 1.3:+69234918 | None:intergenic |
| TTCGCCCCACTCACTTCTCG+TGG | 0.578687 | 1.3:-69234979 | MS.gene49099:CDS |
| TCGTGGTTCACAGCAGTACA+GGG | 0.585028 | 1.3:-69234962 | MS.gene49099:CDS |
| CTATTCAAGAGATGTTTAGG+AGG | 0.585067 | 1.3:-69234669 | MS.gene49099:CDS |
| GAGCACGGGATCGACTCCAC+CGG | 0.585627 | 1.3:-69236842 | MS.gene49099:CDS |
| GCTCATCTTACCACGGAACA+TGG | 0.591088 | 1.3:+69234843 | None:intergenic |
| GATGCTACTGCAGATGAAGA+GGG | 0.594540 | 1.3:-69234508 | MS.gene49099:CDS |
| CAGTACCACCACCAAGGGAG+TGG | 0.594965 | 1.3:+69235503 | None:intergenic |
| GACTCCACCGGAAGGTACCA+AGG | 0.596275 | 1.3:-69236830 | MS.gene49099:CDS |
| GTCCGGTGCCGGAAACAACT+GGG | 0.596726 | 1.3:-69236639 | MS.gene49099:CDS |
| CTGACGCTATCCATAGTCCC+TGG | 0.596836 | 1.3:+69236713 | None:intergenic |
| CGTGAGATTCTTCACATCCA+AGG | 0.598071 | 1.3:-69236917 | MS.gene49099:CDS |
| ACAGCATCTGCCATGTTCCG+TGG | 0.598969 | 1.3:-69234853 | MS.gene49099:CDS |
| TGTCAGATACCTTAGGAGAT+GGG | 0.602090 | 1.3:+69235401 | None:intergenic |
| GTTCCCTTGGTACCTTCCGG+TGG | 0.611432 | 1.3:+69236826 | None:intergenic |
| ACGACCGTGGCGAGGATCAG+CGG | 0.616429 | 1.3:+69234882 | None:intergenic |
| AGAACCAGTACCACCACCAA+GGG | 0.618252 | 1.3:+69235498 | None:intergenic |
| TATTCAAGAGATGTTTAGGA+GGG | 0.623258 | 1.3:-69234668 | MS.gene49099:CDS |
| CACATCCAAGGAGGACAATG+CGG | 0.623605 | 1.3:-69236905 | MS.gene49099:CDS |
| TGAGCTTACCCAGCAGATGT+GGG | 0.624406 | 1.3:-69234926 | MS.gene49099:CDS |
| AAGTAAGCATCATTCGATCA+GGG | 0.636592 | 1.3:+69235434 | None:intergenic |
| GTGAACCACGAGAAGTGAGT+GGG | 0.640132 | 1.3:+69234974 | None:intergenic |
| GCATGTAACACCACTCATTG+TGG | 0.646589 | 1.3:+69235095 | None:intergenic |
| TGAGAATGCTGATGAATGCA+TGG | 0.647401 | 1.3:-69235332 | MS.gene49099:CDS |
| GCTTGATGTTGTTAGGAAGG+AGG | 0.649257 | 1.3:-69236573 | MS.gene49099:CDS |
| TGGAGGGATATCACAGACAG+TGG | 0.656170 | 1.3:+69234735 | None:intergenic |
| GCGAAAGGTCACTACACTGA+AGG | 0.656934 | 1.3:-69236617 | MS.gene49099:CDS |
| TGTGCCGCTGATCCTCGCCA+CGG | 0.666734 | 1.3:-69234886 | MS.gene49099:CDS |
| ACGGGATCGACTCCACCGGA+AGG | 0.666784 | 1.3:-69236838 | MS.gene49099:CDS |
| ACCATGAAGAAATGCAAACG+AGG | 0.669586 | 1.3:+69235006 | None:intergenic |
| CAGAACCAGTACCACCACCA+AGG | 0.675091 | 1.3:+69235497 | None:intergenic |
| ATGCTACTGCAGATGAAGAG+GGG | 0.676889 | 1.3:-69234507 | MS.gene49099:CDS |
| TGTGAACCACGAGAAGTGAG+TGG | 0.677800 | 1.3:+69234973 | None:intergenic |
| ACTCCACCGGAAGGTACCAA+GGG | 0.680036 | 1.3:-69236829 | MS.gene49099:CDS |
| GATCTGAGTTCAATTGACCA+GGG | 0.680125 | 1.3:+69235061 | None:intergenic |
| CCTTGGTGCTCATCTTACCA+CGG | 0.683046 | 1.3:+69234836 | None:intergenic |
| TTTGATTTCTAAGATCAGGG+AGG | 0.713644 | 1.3:-69235461 | MS.gene49099:CDS |
| TGAACCACGAGAAGTGAGTG+GGG | 0.716024 | 1.3:+69234975 | None:intergenic |
| ATGCTGTCAAATAACGACCG+TGG | 0.720715 | 1.3:+69234869 | None:intergenic |
| CCGTGGTAAGATGAGCACCA+AGG | 0.721405 | 1.3:-69234836 | MS.gene49099:CDS |
| ATTGCTGGTACTCTGAGACA+AGG | 0.726640 | 1.3:+69234536 | None:intergenic |
| TGGTAAGATGAGCACCAAGG+AGG | 0.729589 | 1.3:-69234833 | MS.gene49099:CDS |
| GAGATTCTTCACATCCAAGG+AGG | 0.735981 | 1.3:-69236914 | MS.gene49099:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGTTATACAAGTTTTTA+AGG | + | chr1.3:69235503-69235522 | None:intergenic | 15.0% |
| !!! | TTGATAATCAAATTTGATAT+GGG | - | chr1.3:69235542-69235561 | MS.gene49099:intron | 15.0% |
| !! | AAATAGTTAGAAACAGAAAT+CGG | + | chr1.3:69234868-69234887 | None:intergenic | 20.0% |
| !! | TACAAGTTATTAAAAAACAG+TGG | + | chr1.3:69235662-69235681 | None:intergenic | 20.0% |
| !! | TTATTAGCAAAAAACTTAAC+AGG | + | chr1.3:69236165-69236184 | None:intergenic | 20.0% |
| !!! | GTTGATAATCAAATTTGATA+TGG | - | chr1.3:69235541-69235560 | MS.gene49099:intron | 20.0% |
| !!! | TGTTTTGTTTACTTGAATTT+GGG | - | chr1.3:69235810-69235829 | MS.gene49099:intron | 20.0% |
| ! | AATTCAAGTAAACAAAACAG+AGG | + | chr1.3:69235809-69235828 | None:intergenic | 25.0% |
| ! | TATGAATGAAGCTAAATTGT+AGG | - | chr1.3:69235230-69235249 | MS.gene49099:intron | 25.0% |
| ! | TGTATGATCTGATAATTATC+TGG | - | chr1.3:69236206-69236225 | MS.gene49099:intron | 25.0% |
| !! | ATCTGATAATTATCTGGAAT+TGG | - | chr1.3:69236212-69236231 | MS.gene49099:intron | 25.0% |
| !! | TCTGATAATTATCTGGAATT+GGG | - | chr1.3:69236213-69236232 | MS.gene49099:intron | 25.0% |
| !!! | AAAATGGCTTCTACTTTTAT+TGG | - | chr1.3:69236676-69236695 | MS.gene49099:CDS | 25.0% |
| !!! | ACTTTTGATTTCTAAGATCA+GGG | - | chr1.3:69235915-69235934 | MS.gene49099:intron | 25.0% |
| !!! | CTGTTTTGTTTACTTGAATT+TGG | - | chr1.3:69235809-69235828 | MS.gene49099:intron | 25.0% |
| AAACATCTCTTGAATAGATG+TGG | + | chr1.3:69236707-69236726 | None:intergenic | 30.0% | |
| AATCAAATTTGATATGGGAG+TGG | - | chr1.3:69235547-69235566 | MS.gene49099:intron | 30.0% | |
| ACACAAAAAATCCTAGATCA+AGG | + | chr1.3:69235067-69235086 | None:intergenic | 30.0% | |
| ACTTAACAGGCAAAAAACAT+AGG | + | chr1.3:69236152-69236171 | None:intergenic | 30.0% | |
| ATTCATCATACTTTGTTGAG+TGG | - | chr1.3:69236602-69236621 | MS.gene49099:CDS | 30.0% | |
| CATCTATTCAAGAGATGTTT+AGG | - | chr1.3:69236707-69236726 | MS.gene49099:CDS | 30.0% | |
| TATTCAAGAGATGTTTAGGA+GGG | - | chr1.3:69236711-69236730 | MS.gene49099:CDS | 30.0% | |
| ! | ATTTGAAGTGCTATAGCAAT+AGG | - | chr1.3:69235594-69235613 | MS.gene49099:intron | 30.0% |
| ! | TGAATTTGGGATTTCTAACA+TGG | - | chr1.3:69235823-69235842 | MS.gene49099:intron | 30.0% |
| ! | TTAGTATGTAAGAGCATGAT+TGG | - | chr1.3:69235690-69235709 | MS.gene49099:intron | 30.0% |
| !!! | CACTTTTGATTTCTAAGATC+AGG | - | chr1.3:69235914-69235933 | MS.gene49099:intron | 30.0% |
| AAAGTAAGCATCATTCGATC+AGG | + | chr1.3:69235949-69235968 | None:intergenic | 35.0% | |
| AAGAAATGCAAACGAGGAAA+AGG | + | chr1.3:69236370-69236389 | None:intergenic | 35.0% | |
| AAGTAAGCATCATTCGATCA+GGG | + | chr1.3:69235948-69235967 | None:intergenic | 35.0% | |
| ACACATAGATTCCTAGATCA+AGG | + | chr1.3:69235352-69235371 | None:intergenic | 35.0% | |
| ATTATGATGAACTCACAGCT+TGG | + | chr1.3:69236129-69236148 | None:intergenic | 35.0% | |
| CTATTCAAGAGATGTTTAGG+AGG | - | chr1.3:69236710-69236729 | MS.gene49099:CDS | 35.0% | |
| GAGAATTGTGATTGTCTTCA+AGG | - | chr1.3:69234831-69234850 | MS.gene49099:CDS | 35.0% | |
| TCATTGTGGCAGAAATTAGA+TGG | + | chr1.3:69236273-69236292 | None:intergenic | 35.0% | |
| TGTCCAAAAACGAAGTTATC+CGG | + | chr1.3:69234720-69234739 | None:intergenic | 35.0% | |
| ! | AATGCAAGAAAGCTTTTCTG+CGG | + | chr1.3:69236762-69236781 | None:intergenic | 35.0% |
| ! | ACAGTGGATTTCACATTGTT+GGG | + | chr1.3:69236631-69236650 | None:intergenic | 35.0% |
| ! | CATGGTTTTCAGAATCTTTC+AGG | - | chr1.3:69235841-69235860 | MS.gene49099:intron | 35.0% |
| !! | TTTGATTTCTAAGATCAGGG+AGG | - | chr1.3:69235918-69235937 | MS.gene49099:intron | 35.0% |
| !!! | TCAGAATCTTTCAGGTTTTC+AGG | - | chr1.3:69235849-69235868 | MS.gene49099:intron | 35.0% |
| AACTGCAACCAAACAACACA+AGG | + | chr1.3:69236239-69236258 | None:intergenic | 40.0% | |
| ACAACAGTGTCAGATACCTT+AGG | + | chr1.3:69235988-69236007 | None:intergenic | 40.0% | |
| ACCATGAAGAAATGCAAACG+AGG | + | chr1.3:69236376-69236395 | None:intergenic | 40.0% | |
| AGAGAATCGAACCTTGATCT+AGG | - | chr1.3:69235053-69235072 | MS.gene49099:CDS | 40.0% | |
| AGAGTTTCGAACCTTGATCT+AGG | - | chr1.3:69235338-69235357 | MS.gene49099:CDS | 40.0% | |
| AGATCTGAGTTCAATTGACC+AGG | + | chr1.3:69236322-69236341 | None:intergenic | 40.0% | |
| AGCTTGGAGTAGTGAGTTTA+AGG | + | chr1.3:69236113-69236132 | None:intergenic | 40.0% | |
| CATCAGCATTCTCAACAAGT+TGG | + | chr1.3:69236041-69236060 | None:intergenic | 40.0% | |
| CGTTTGCATTTCTTCATGGT+GGG | - | chr1.3:69236376-69236395 | MS.gene49099:intron | 40.0% | |
| CTAATTTCTGCCACAATGAG+TGG | - | chr1.3:69236274-69236293 | MS.gene49099:intron | 40.0% | |
| GAACTCAGATCTTCGCAAAT+TGG | - | chr1.3:69236330-69236349 | MS.gene49099:intron | 40.0% | |
| GATCTGAGTTCAATTGACCA+GGG | + | chr1.3:69236321-69236340 | None:intergenic | 40.0% | |
| GCAGAAAAGCTTTCTTGCAT+TGG | - | chr1.3:69236761-69236780 | MS.gene49099:CDS | 40.0% | |
| GCTTGGAGTAGTGAGTTTAA+GGG | + | chr1.3:69236112-69236131 | None:intergenic | 40.0% | |
| GTATGACTATGAAGATGAGG+AGG | - | chr1.3:69236894-69236913 | MS.gene49099:CDS | 40.0% | |
| TCCTCGTTTGCATTTCTTCA+TGG | - | chr1.3:69236372-69236391 | MS.gene49099:intron | 40.0% | |
| TCGTTTGCATTTCTTCATGG+TGG | - | chr1.3:69236375-69236394 | MS.gene49099:intron | 40.0% | |
| TGAGAATGCTGATGAATGCA+TGG | - | chr1.3:69236047-69236066 | MS.gene49099:intron | 40.0% | |
| TGTCAGATACCTTAGGAGAT+GGG | + | chr1.3:69235981-69236000 | None:intergenic | 40.0% | |
| ! | ACAGAGAGTGTAGCATTGTA+AGG | + | chr1.3:69236015-69236034 | None:intergenic | 40.0% |
| ! | GACAGTGGATTTCACATTGT+TGG | + | chr1.3:69236632-69236651 | None:intergenic | 40.0% |
| ! | GCTTTCTTGCATTGGTATAC+TGG | - | chr1.3:69236769-69236788 | MS.gene49099:CDS | 40.0% |
| ! | TTGCATTGGTATACTGGAGA+GGG | - | chr1.3:69236775-69236794 | MS.gene49099:CDS | 40.0% |
| !! | AACTTCGTTTTTGGACAGTC+CGG | - | chr1.3:69234723-69234742 | MS.gene49099:CDS | 40.0% |
| !! | AGGAGCTGAGTTGATTGATT+CGG | - | chr1.3:69234782-69234801 | MS.gene49099:CDS | 40.0% |
| !! | ATTCGGTGCTTGATGTTGTT+AGG | - | chr1.3:69234799-69234818 | MS.gene49099:CDS | 40.0% |
| !! | TTGTGTTGTTTGGTTGCAGT+TGG | - | chr1.3:69236238-69236257 | MS.gene49099:intron | 40.0% |
| ACCAAATCGGAGCCAAATTC+TGG | - | chr1.3:69234499-69234518 | MS.gene49099:CDS | 45.0% | |
| ACTATGGATAGCGTCAGATC+TGG | - | chr1.3:69234672-69234691 | MS.gene49099:CDS | 45.0% | |
| AGATCCATGAGAACAGCTCT+AGG | + | chr1.3:69234642-69234661 | None:intergenic | 45.0% | |
| AGATGAGGAGGAAGAAGTTC+AGG | - | chr1.3:69236906-69236925 | MS.gene49099:CDS | 45.0% | |
| AGATGCTACTGCAGATGAAG+AGG | - | chr1.3:69236870-69236889 | MS.gene49099:CDS | 45.0% | |
| ATGCTACTGCAGATGAAGAG+GGG | - | chr1.3:69236872-69236891 | MS.gene49099:CDS | 45.0% | |
| ATGCTGTCAAATAACGACCG+TGG | + | chr1.3:69236513-69236532 | None:intergenic | 45.0% | |
| CAAAAACGAAGTTATCCGGC+CGG | + | chr1.3:69234716-69234735 | None:intergenic | 45.0% | |
| CAGTAGCATCTTGGTATTGC+TGG | + | chr1.3:69236861-69236880 | None:intergenic | 45.0% | |
| CCAAATCGGAGCCAAATTCT+GGG | - | chr1.3:69234500-69234519 | MS.gene49099:CDS | 45.0% | |
| CGTGAGATTCTTCACATCCA+AGG | - | chr1.3:69234462-69234481 | MS.gene49099:CDS | 45.0% | |
| CTTCATCTGCAGTAGCATCT+TGG | + | chr1.3:69236870-69236889 | None:intergenic | 45.0% | |
| GAGATTCTTCACATCCAAGG+AGG | - | chr1.3:69234465-69234484 | MS.gene49099:CDS | 45.0% | |
| GAGGGTAAGTGAGCAATTCA+CGG | - | chr1.3:69236729-69236748 | MS.gene49099:CDS | 45.0% | |
| GAGTAGTGAGTTTAAGGGTG+CGG | + | chr1.3:69236107-69236126 | None:intergenic | 45.0% | |
| GATGCTACTGCAGATGAAGA+GGG | - | chr1.3:69236871-69236890 | MS.gene49099:CDS | 45.0% | |
| GCACACAACTTCCCAGAATT+TGG | + | chr1.3:69234514-69234533 | None:intergenic | 45.0% | |
| GCATGTAACACCACTCATTG+TGG | + | chr1.3:69236287-69236306 | None:intergenic | 45.0% | |
| GCTTGATGTTGTTAGGAAGG+AGG | - | chr1.3:69234806-69234825 | MS.gene49099:CDS | 45.0% | |
| GGGGTATGACTATGAAGATG+AGG | - | chr1.3:69236891-69236910 | MS.gene49099:CDS | 45.0% | |
| GGTGCTTGATGTTGTTAGGA+AGG | - | chr1.3:69234803-69234822 | MS.gene49099:CDS | 45.0% | |
| GTGTCAGATACCTTAGGAGA+TGG | + | chr1.3:69235982-69236001 | None:intergenic | 45.0% | |
| GTTGAAGATCGTTGTTCCCT+TGG | + | chr1.3:69234569-69234588 | None:intergenic | 45.0% | |
| TACTACAACGAAGCGAGTTG+TGG | - | chr1.3:69234606-69234625 | MS.gene49099:CDS | 45.0% | |
| TAGAGCTGTTCTCATGGATC+TGG | - | chr1.3:69234641-69234660 | MS.gene49099:CDS | 45.0% | |
| TGCTGATGAATGCATGGTTC+TGG | - | chr1.3:69236053-69236072 | MS.gene49099:intron | 45.0% | |
| TGTCTGTGATATCCCTCCAA+CGG | - | chr1.3:69236648-69236667 | MS.gene49099:CDS | 45.0% | |
| TTGGTATACTGGAGAGGGTA+TGG | - | chr1.3:69236780-69236799 | MS.gene49099:CDS | 45.0% | |
| ! | CAGCATTCTCAACAAGTTGG+TGG | + | chr1.3:69236038-69236057 | None:intergenic | 45.0% |
| ! | CTTGCATTGGTATACTGGAG+AGG | - | chr1.3:69236774-69236793 | MS.gene49099:CDS | 45.0% |
| ! | GAATTGGGCCTTGTGTTGTT+TGG | - | chr1.3:69236228-69236247 | MS.gene49099:intron | 45.0% |
| ! | GTCCATACGGTCAGATTTTC+CGG | - | chr1.3:69234694-69234713 | MS.gene49099:CDS | 45.0% |
| !! | ATTGCTGGTACTCTGAGACA+AGG | + | chr1.3:69236846-69236865 | None:intergenic | 45.0% |
| !!! | CCATTTTAAGACCCGTTGGA+GGG | + | chr1.3:69236663-69236682 | None:intergenic | 45.0% |
| !!! | GAAGCCATTTTAAGACCCGT+TGG | + | chr1.3:69236667-69236686 | None:intergenic | 45.0% |
| ACATCCAAGGAGGACAATGC+GGG | - | chr1.3:69234475-69234494 | MS.gene49099:CDS | 50.0% | |
| ACATGCTGTCTTCGTTTCCC+TGG | - | chr1.3:69236301-69236320 | MS.gene49099:intron | 50.0% | |
| AGAACCAGTACCACCACCAA+GGG | + | chr1.3:69235884-69235903 | None:intergenic | 50.0% | |
| AGCGTCAGATCTGGTCCATA+CGG | - | chr1.3:69234681-69234700 | MS.gene49099:CDS | 50.0% | |
| CACATCCAAGGAGGACAATG+CGG | - | chr1.3:69234474-69234493 | MS.gene49099:CDS | 50.0% | |
| CATCTGCTCATCAACCTCCT+TGG | + | chr1.3:69236563-69236582 | None:intergenic | 50.0% | |
| CCCTCCAACGGGTCTTAAAA+TGG | - | chr1.3:69236660-69236679 | MS.gene49099:CDS | 50.0% | |
| CGTTCCTAGAGCTGTTCTCA+TGG | - | chr1.3:69234635-69234654 | MS.gene49099:CDS | 50.0% | |
| CTCTGTGTTCCCATCTCCTA+AGG | - | chr1.3:69235969-69235988 | MS.gene49099:intron | 50.0% | |
| CTTCGAATCCCACATCTGCT+GGG | + | chr1.3:69236464-69236483 | None:intergenic | 50.0% | |
| GCGAAAGGTCACTACACTGA+AGG | - | chr1.3:69234762-69234781 | MS.gene49099:CDS | 50.0% | |
| GCTCATCTTACCACGGAACA+TGG | + | chr1.3:69236539-69236558 | None:intergenic | 50.0% | |
| GGACAATGCGGGAACCAAAT+CGG | - | chr1.3:69234486-69234505 | MS.gene49099:CDS | 50.0% | |
| GTCTGTGATATCCCTCCAAC+GGG | - | chr1.3:69236649-69236668 | MS.gene49099:CDS | 50.0% | |
| GTGAACCACGAGAAGTGAGT+GGG | + | chr1.3:69236408-69236427 | None:intergenic | 50.0% | |
| GTTGTTCCCTTGGTACCTTC+CGG | + | chr1.3:69234559-69234578 | None:intergenic | 50.0% | |
| TCGTGGTTCACAGCAGTACA+GGG | - | chr1.3:69236417-69236436 | MS.gene49099:intron | 50.0% | |
| TCTTCGAATCCCACATCTGC+TGG | + | chr1.3:69236465-69236484 | None:intergenic | 50.0% | |
| TGAACCACGAGAAGTGAGTG+GGG | + | chr1.3:69236407-69236426 | None:intergenic | 50.0% | |
| TGAGCTTACCCAGCAGATGT+GGG | - | chr1.3:69236453-69236472 | MS.gene49099:intron | 50.0% | |
| TGAGGAGGAAGAAGTTCAGG+AGG | - | chr1.3:69236909-69236928 | MS.gene49099:CDS | 50.0% | |
| TGGAGGGATATCACAGACAG+TGG | + | chr1.3:69236647-69236666 | None:intergenic | 50.0% | |
| TGGTAAGATGAGCACCAAGG+AGG | - | chr1.3:69236546-69236565 | MS.gene49099:intron | 50.0% | |
| TGTGAACCACGAGAAGTGAG+TGG | + | chr1.3:69236409-69236428 | None:intergenic | 50.0% | |
| ! | ACCTTTCGCCCAGTTGTTTC+CGG | + | chr1.3:69234751-69234770 | None:intergenic | 50.0% |
| ! | ATACGGTCAGATTTTCCGGC+CGG | - | chr1.3:69234698-69234717 | MS.gene49099:CDS | 50.0% |
| ! | CCCAGAATTTGGCTCCGATT+TGG | + | chr1.3:69234503-69234522 | None:intergenic | 50.0% |
| ! | CGGCCGGATAACTTCGTTTT+TGG | - | chr1.3:69234714-69234733 | MS.gene49099:CDS | 50.0% |
| ! | TGGAGAGGGTATGGATGAGA+TGG | - | chr1.3:69236789-69236808 | MS.gene49099:CDS | 50.0% |
| ! | TTCTCATGGATCTGGAGCCA+GGG | - | chr1.3:69234649-69234668 | MS.gene49099:CDS | 50.0% |
| !! | CCTTGGTGCTCATCTTACCA+CGG | + | chr1.3:69236546-69236565 | None:intergenic | 50.0% |
| !! | GGTGGTACTGGTTCTGGAAT+GGG | - | chr1.3:69235889-69235908 | MS.gene49099:intron | 50.0% |
| !! | TGGTGGTACTGGTTCTGGAA+TGG | - | chr1.3:69235888-69235907 | MS.gene49099:intron | 50.0% |
| !! | TTTCAGGTTTGCCACTCCCT+TGG | - | chr1.3:69235865-69235884 | MS.gene49099:intron | 50.0% |
| !!! | GCCATTTTAAGACCCGTTGG+AGG | + | chr1.3:69236664-69236683 | None:intergenic | 50.0% |
| AAGTTGTGTGCGCTGAGCAC+GGG | - | chr1.3:69234523-69234542 | MS.gene49099:CDS | 55.0% | |
| ACAGCATCTGCCATGTTCCG+TGG | - | chr1.3:69236526-69236545 | MS.gene49099:intron | 55.0% | |
| CACATCTGCTGGGTAAGCTC+AGG | + | chr1.3:69236454-69236473 | None:intergenic | 55.0% | |
| CAGAACCAGTACCACCACCA+AGG | + | chr1.3:69235885-69235904 | None:intergenic | 55.0% | |
| CCGTGGTAAGATGAGCACCA+AGG | - | chr1.3:69236543-69236562 | MS.gene49099:intron | 55.0% | |
| CTCGTGGTTCACAGCAGTAC+AGG | - | chr1.3:69236416-69236435 | MS.gene49099:intron | 55.0% | |
| CTGACGCTATCCATAGTCCC+TGG | + | chr1.3:69234669-69234688 | None:intergenic | 55.0% | |
| CTGAGCTTACCCAGCAGATG+TGG | - | chr1.3:69236452-69236471 | MS.gene49099:intron | 55.0% | |
| GAAGTTGTGTGCGCTGAGCA+CGG | - | chr1.3:69234522-69234541 | MS.gene49099:CDS | 55.0% | |
| GGCCGGAAAATCTGACCGTA+TGG | + | chr1.3:69234699-69234718 | None:intergenic | 55.0% | |
| GTCAAATAACGACCGTGGCG+AGG | + | chr1.3:69236508-69236527 | None:intergenic | 55.0% | |
| ! | GTTCTCATGGATCTGGAGCC+AGG | - | chr1.3:69234648-69234667 | MS.gene49099:CDS | 55.0% |
| !! | ACTCCACCGGAAGGTACCAA+GGG | - | chr1.3:69234550-69234569 | MS.gene49099:CDS | 55.0% |
| !! | CTTGGTGGTGGTACTGGTTC+TGG | - | chr1.3:69235883-69235902 | MS.gene49099:intron | 55.0% |
| !! | GTTTTTGGACAGTCCGGTGC+CGG | - | chr1.3:69234729-69234748 | MS.gene49099:CDS | 55.0% |
| CAGGTTTGCCACTCCCTTGG+TGG | - | chr1.3:69235868-69235887 | MS.gene49099:intron | 60.0% | |
| CAGTACCACCACCAAGGGAG+TGG | + | chr1.3:69235879-69235898 | None:intergenic | 60.0% | |
| GCCGGAAACAACTGGGCGAA+AGG | - | chr1.3:69234747-69234766 | MS.gene49099:CDS | 60.0% | |
| GGTTCCCGCATTGTCCTCCT+TGG | + | chr1.3:69234482-69234501 | None:intergenic | 60.0% | |
| GTTCCCTTGGTACCTTCCGG+TGG | + | chr1.3:69234556-69234575 | None:intergenic | 60.0% | |
| GTTTGCCACTCCCTTGGTGG+TGG | - | chr1.3:69235871-69235890 | MS.gene49099:intron | 60.0% | |
| TTCGCCCCACTCACTTCTCG+TGG | - | chr1.3:69236400-69236419 | MS.gene49099:intron | 60.0% | |
| ! | AGTCCGGTGCCGGAAACAAC+TGG | - | chr1.3:69234739-69234758 | MS.gene49099:CDS | 60.0% |
| ! | GGATCTGGAGCCAGGGACTA+TGG | - | chr1.3:69234656-69234675 | MS.gene49099:CDS | 60.0% |
| ! | GTCCGGTGCCGGAAACAACT+GGG | - | chr1.3:69234740-69234759 | MS.gene49099:CDS | 60.0% |
| !! | CACTCCCTTGGTGGTGGTAC+TGG | - | chr1.3:69235877-69235896 | MS.gene49099:intron | 60.0% |
| !! | GACTCCACCGGAAGGTACCA+AGG | - | chr1.3:69234549-69234568 | MS.gene49099:CDS | 60.0% |
| ACGACCGTGGCGAGGATCAG+CGG | + | chr1.3:69236500-69236519 | None:intergenic | 65.0% | |
| ! | ACGGGATCGACTCCACCGGA+AGG | - | chr1.3:69234541-69234560 | MS.gene49099:CDS | 65.0% |
| ! | CGCCCAGTTGTTTCCGGCAC+CGG | + | chr1.3:69234745-69234764 | None:intergenic | 65.0% |
| ! | GAGCACGGGATCGACTCCAC+CGG | - | chr1.3:69234537-69234556 | MS.gene49099:CDS | 65.0% |
| ! | TGTGCCGCTGATCCTCGCCA+CGG | - | chr1.3:69236493-69236512 | MS.gene49099:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 69234459 | 69236942 | 69234459 | ID=MS.gene49099 |
| chr1.3 | mRNA | 69234459 | 69236942 | 69234459 | ID=MS.gene49099.t1;Parent=MS.gene49099 |
| chr1.3 | exon | 69236549 | 69236942 | 69236549 | ID=MS.gene49099.t1.exon1;Parent=MS.gene49099.t1 |
| chr1.3 | CDS | 69236549 | 69236942 | 69236549 | ID=cds.MS.gene49099.t1;Parent=MS.gene49099.t1 |
| chr1.3 | exon | 69235269 | 69235538 | 69235269 | ID=MS.gene49099.t1.exon2;Parent=MS.gene49099.t1 |
| chr1.3 | CDS | 69235269 | 69235538 | 69235269 | ID=cds.MS.gene49099.t1;Parent=MS.gene49099.t1 |
| chr1.3 | exon | 69234459 | 69235144 | 69234459 | ID=MS.gene49099.t1.exon3;Parent=MS.gene49099.t1 |
| chr1.3 | CDS | 69234459 | 69235144 | 69234459 | ID=cds.MS.gene49099.t1;Parent=MS.gene49099.t1 |
| Gene Sequence |
| Protein sequence |
