Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014419.t1 | PNX96892.1 | 99.8 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 4.90E-261 | 909.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014419.t1 | Q39445 | 98.4 | 449 | 7 | 0 | 1 | 449 | 1 | 449 | 3.5e-260 | 898.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014419.t1 | A0A2K3N1J7 | 99.8 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 3.5e-261 | 909.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014419.t1 | MTR_3g113970 | 99.333 | 450 | 2 | 1 | 1 | 449 | 1 | 450 | 0.0 | 936 |
| MS.gene014419.t1 | MTR_2g031310 | 94.907 | 432 | 20 | 1 | 1 | 432 | 1 | 430 | 0.0 | 839 |
| MS.gene014419.t1 | MTR_7g089120 | 93.750 | 432 | 25 | 1 | 1 | 432 | 1 | 430 | 0.0 | 833 |
| MS.gene014419.t1 | MTR_4g094535 | 93.981 | 432 | 24 | 1 | 1 | 432 | 1 | 430 | 0.0 | 832 |
| MS.gene014419.t1 | MTR_1g101130 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| MS.gene014419.t1 | MTR_4g019110 | 92.593 | 432 | 30 | 1 | 1 | 432 | 1 | 430 | 0.0 | 827 |
| MS.gene014419.t1 | MTR_4g017630 | 93.056 | 432 | 28 | 1 | 1 | 432 | 1 | 430 | 0.0 | 825 |
| MS.gene014419.t1 | MTR_4g019090 | 92.361 | 432 | 31 | 1 | 1 | 432 | 1 | 430 | 0.0 | 824 |
| MS.gene014419.t1 | MTR_8g098360 | 92.558 | 430 | 30 | 1 | 1 | 430 | 1 | 428 | 0.0 | 820 |
| MS.gene014419.t1 | MTR_8g107250 | 89.640 | 444 | 40 | 3 | 1 | 441 | 1 | 441 | 0.0 | 817 |
| MS.gene014419.t1 | MTR_8g085980 | 40.553 | 434 | 250 | 1 | 1 | 426 | 1 | 434 | 1.28e-124 | 369 |
| MS.gene014419.t1 | MTR_1g106005 | 40.611 | 458 | 244 | 4 | 1 | 447 | 1 | 441 | 9.92e-123 | 365 |
| MS.gene014419.t1 | MTR_3g110720 | 40.220 | 455 | 244 | 4 | 1 | 444 | 1 | 438 | 1.56e-122 | 364 |
| MS.gene014419.t1 | MTR_4g097830 | 40.220 | 455 | 244 | 4 | 1 | 444 | 1 | 438 | 3.60e-122 | 363 |
| MS.gene014419.t1 | MTR_7g085800 | 39.159 | 452 | 253 | 2 | 1 | 444 | 1 | 438 | 4.62e-122 | 363 |
| MS.gene014419.t1 | MTR_6g029190 | 39.955 | 448 | 259 | 3 | 1 | 438 | 1 | 448 | 5.82e-122 | 363 |
| MS.gene014419.t1 | MTR_2g041670 | 36.947 | 452 | 268 | 4 | 1 | 440 | 1 | 447 | 3.35e-100 | 308 |
| MS.gene014419.t1 | MTR_7g117050 | 35.498 | 462 | 267 | 10 | 2 | 444 | 3 | 452 | 1.49e-96 | 298 |
| MS.gene014419.t1 | MTR_2g041400 | 36.682 | 428 | 258 | 3 | 1 | 420 | 1 | 423 | 1.56e-96 | 296 |
| MS.gene014419.t1 | MTR_3g063410 | 32.432 | 148 | 92 | 1 | 258 | 397 | 30 | 177 | 1.99e-27 | 108 |
| MS.gene014419.t1 | MTR_3g063410 | 30.370 | 135 | 86 | 1 | 271 | 397 | 4 | 138 | 2.27e-20 | 87.8 |
| MS.gene014419.t1 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 379 | 407 | 1 | 29 | 8.61e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014419.t1 | AT1G75780 | 94.676 | 432 | 22 | 1 | 1 | 432 | 1 | 431 | 0.0 | 840 |
| MS.gene014419.t1 | AT1G20010 | 94.213 | 432 | 24 | 1 | 1 | 432 | 1 | 431 | 0.0 | 836 |
| MS.gene014419.t1 | AT5G12250 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 832 |
| MS.gene014419.t1 | AT5G23860 | 93.519 | 432 | 26 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| MS.gene014419.t1 | AT5G23860 | 93.519 | 432 | 26 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| MS.gene014419.t1 | AT5G62700 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 828 |
| MS.gene014419.t1 | AT5G62690 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 828 |
| MS.gene014419.t1 | AT2G29550 | 93.072 | 433 | 28 | 1 | 1 | 433 | 1 | 431 | 0.0 | 825 |
| MS.gene014419.t1 | AT5G44340 | 92.361 | 432 | 31 | 1 | 1 | 432 | 1 | 430 | 0.0 | 820 |
| MS.gene014419.t1 | AT4G20890 | 93.023 | 430 | 28 | 1 | 1 | 430 | 1 | 428 | 0.0 | 819 |
| MS.gene014419.t1 | AT1G64740 | 40.092 | 434 | 252 | 1 | 1 | 426 | 1 | 434 | 2.43e-124 | 369 |
| MS.gene014419.t1 | AT5G19780 | 40.323 | 434 | 251 | 1 | 1 | 426 | 1 | 434 | 4.82e-124 | 368 |
| MS.gene014419.t1 | AT5G19770 | 40.323 | 434 | 251 | 1 | 1 | 426 | 1 | 434 | 4.82e-124 | 368 |
| MS.gene014419.t1 | AT1G04820 | 40.732 | 437 | 245 | 3 | 1 | 426 | 1 | 434 | 3.42e-122 | 363 |
| MS.gene014419.t1 | AT1G50010 | 40.732 | 437 | 245 | 3 | 1 | 426 | 1 | 434 | 3.42e-122 | 363 |
| MS.gene014419.t1 | AT4G14960 | 40.503 | 437 | 246 | 3 | 1 | 426 | 1 | 434 | 2.57e-121 | 361 |
| MS.gene014419.t1 | AT4G14960 | 40.360 | 389 | 218 | 3 | 1 | 378 | 1 | 386 | 6.59e-102 | 311 |
| MS.gene014419.t1 | AT5G05620 | 35.065 | 462 | 269 | 10 | 2 | 444 | 3 | 452 | 1.13e-95 | 296 |
| MS.gene014419.t1 | AT3G61650 | 34.979 | 466 | 272 | 10 | 2 | 448 | 3 | 456 | 1.98e-95 | 295 |
Find 121 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGAATTTGGATCCAATT+TGG | 0.211203 | 3.1:+90289080 | None:intergenic |
| AATCTGGTGCTGGTAATAAT+TGG | 0.217101 | 3.1:-90288835 | MS.gene014419:CDS |
| ACCAAATTGGATCCAAATTC+TGG | 0.227415 | 3.1:-90289081 | MS.gene014419:CDS |
| GCATATCACCTCCCAGAATT+TGG | 0.235569 | 3.1:+90289069 | None:intergenic |
| CTTGGAGGAGGCACGGGTTC+TGG | 0.250950 | 3.1:-90286927 | MS.gene014419:CDS |
| CACATTTGTTGAGTCAGTTC+CGG | 0.265997 | 3.1:+90286389 | None:intergenic |
| CTTCAATTCAGGAGATGTTT+AGG | 0.278983 | 3.1:-90286133 | MS.gene014419:CDS |
| TGGGAACTCAACTTCAATTC+AGG | 0.292593 | 3.1:-90286144 | MS.gene014419:CDS |
| ACATGTTGTCTGAGGTTTCC+TGG | 0.293676 | 3.1:-90286539 | MS.gene014419:CDS |
| CGTCCTGATAATTTCGTGTT+TGG | 0.301654 | 3.1:-90288860 | MS.gene014419:CDS |
| TGTTCCTAGAGCAGTTCTTA+TGG | 0.307963 | 3.1:-90288939 | MS.gene014419:CDS |
| GGCCAATGCGGTAACCAAAT+TGG | 0.311892 | 3.1:-90289094 | MS.gene014419:CDS |
| GGACGACATCTTCAAATTCT+TGG | 0.312961 | 3.1:+90286175 | None:intergenic |
| ACATTTGTTGAGTCAGTTCC+GGG | 0.324818 | 3.1:+90286390 | None:intergenic |
| AGTATCAGATCTGGTCCTTT+TGG | 0.326490 | 3.1:-90288893 | MS.gene014419:CDS |
| AGCAGCACACATCATATTCT+TGG | 0.353564 | 3.1:+90286361 | None:intergenic |
| GATTTGTTCATCAACCTCTT+TGG | 0.362636 | 3.1:+90286280 | None:intergenic |
| CTATTGCATCCTGGTATTGT+TGG | 0.375777 | 3.1:+90285982 | None:intergenic |
| ATTCTTCATACTTTGTTGAA+TGG | 0.376461 | 3.1:-90286238 | MS.gene014419:CDS |
| CTCTATTGATATCAAAGATT+AGG | 0.378228 | 3.1:-90286896 | MS.gene014419:CDS |
| CCCAGTATACCAATGCAAAA+AGG | 0.378377 | 3.1:+90286070 | None:intergenic |
| CACTTTATGACATTTGCTTC+AGG | 0.383936 | 3.1:-90286725 | MS.gene014419:CDS |
| ACACTAGACTTCACATTGTT+GGG | 0.386553 | 3.1:+90286212 | None:intergenic |
| CACACTAGACTTCACATTGT+TGG | 0.390184 | 3.1:+90286211 | None:intergenic |
| TGTCCAAACACGAAATTATC+AGG | 0.392526 | 3.1:+90288857 | None:intergenic |
| TCTATTGATATCAAAGATTA+GGG | 0.396270 | 3.1:-90286895 | MS.gene014419:CDS |
| CAAGTTTGCCACTCCCTTGG+AGG | 0.398051 | 3.1:-90286942 | MS.gene014419:CDS |
| AGAGAGTAACATGAATGATT+TGG | 0.405537 | 3.1:-90286015 | MS.gene014419:CDS |
| CACTCCCTTGGAGGAGGCAC+GGG | 0.410186 | 3.1:-90286933 | MS.gene014419:CDS |
| TTTCAAGTTTGCCACTCCCT+TGG | 0.411514 | 3.1:-90286945 | MS.gene014419:CDS |
| AGCAGTTTACTGCAATGTTC+CGG | 0.413290 | 3.1:-90286100 | MS.gene014419:CDS |
| ACAGATAGTGTAGCATTATA+TGG | 0.417861 | 3.1:+90286798 | None:intergenic |
| AATTTCGTGTTTGGACAATC+TGG | 0.419616 | 3.1:-90288851 | MS.gene014419:CDS |
| GACGACATCTTCAAATTCTT+GGG | 0.419923 | 3.1:+90286176 | None:intergenic |
| AGTCAAGTATCGGCCATGTC+GGG | 0.423301 | 3.1:+90286334 | None:intergenic |
| AGAGAGATCTTGCACGTTCA+AGG | 0.432109 | 3.1:-90289118 | MS.gene014419:CDS |
| GTGTATTACAATGAAGCTTC+TGG | 0.433261 | 3.1:-90288971 | MS.gene014419:CDS |
| ATCTGGTGCTGGTAATAATT+GGG | 0.444114 | 3.1:-90288834 | MS.gene014419:CDS |
| ACAACTGTGTCAGATACCTT+TGG | 0.444799 | 3.1:+90286825 | None:intergenic |
| GGAGGCACGGGTTCTGGCAT+GGG | 0.445967 | 3.1:-90286921 | MS.gene014419:CDS |
| GTCAATCAACTCAGCACCTT+CGG | 0.448375 | 3.1:+90288796 | None:intergenic |
| ACCTTCGGTATAATGACCTT+TGG | 0.450279 | 3.1:+90288811 | None:intergenic |
| GTCAATTGAACTCTGATCTC+AGG | 0.457782 | 3.1:-90286517 | MS.gene014419:CDS |
| TTGGTATACTGGGGAGGGAA+TGG | 0.459874 | 3.1:-90286060 | MS.gene014419:CDS |
| CCACTCCCTTGGAGGAGGCA+CGG | 0.467869 | 3.1:-90286934 | MS.gene014419:CDS |
| ATCCAATTTGGTTACCGCAT+TGG | 0.468483 | 3.1:+90289092 | None:intergenic |
| CCTCCTCAGCTATTGCATCC+TGG | 0.470174 | 3.1:+90285973 | None:intergenic |
| AAAGTAAGCATCATTCTGTC+TGG | 0.471664 | 3.1:+90286864 | None:intergenic |
| CCAAATTGGATCCAAATTCT+GGG | 0.472580 | 3.1:-90289080 | MS.gene014419:CDS |
| AGAAGGTGAGGAACATTATG+AGG | 0.473711 | 3.1:-90285934 | MS.gene014419:CDS |
| GAGTCAGTTCCGGGACAGTA+AGG | 0.474292 | 3.1:+90286399 | None:intergenic |
| AGGTGGAAATGATACTCAAT+TGG | 0.476330 | 3.1:-90289005 | MS.gene014419:CDS |
| AGGAGGCACGGGTTCTGGCA+TGG | 0.476981 | 3.1:-90286922 | MS.gene014419:CDS |
| TACACTATCTGTCCACCAAC+TGG | 0.477941 | 3.1:-90286787 | MS.gene014419:CDS |
| TGATTTCTGCAACTATGAGC+GGG | 0.478950 | 3.1:-90286565 | MS.gene014419:CDS |
| GAGAATTGTGATTGCTTGCA+AGG | 0.495773 | 3.1:-90288743 | MS.gene014419:intron |
| TTTGCACCTCTCACTTCTCG+TGG | 0.496790 | 3.1:-90286440 | MS.gene014419:CDS |
| GAACACGGCATTGATCCAAC+TGG | 0.497409 | 3.1:-90289043 | MS.gene014419:CDS |
| AGTTGAGTTCCCAATAAAAG+TGG | 0.497826 | 3.1:+90286154 | None:intergenic |
| GAAGATGATTATGAAGAAGA+AGG | 0.502318 | 3.1:-90285951 | MS.gene014419:CDS |
| AAAAGTGAAGACGAGGGAAT+GGG | 0.507198 | 3.1:+90286474 | None:intergenic |
| GTGTCAGATACCTTTGGAGA+TGG | 0.509553 | 3.1:+90286831 | None:intergenic |
| TTGCATTGGTATACTGGGGA+GGG | 0.517335 | 3.1:-90286065 | MS.gene014419:CDS |
| CCGTGCCTCCTCCAAGGGAG+TGG | 0.517493 | 3.1:+90286934 | None:intergenic |
| GTTCTTATGGATCTTGAGCC+TGG | 0.519442 | 3.1:-90288926 | MS.gene014419:CDS |
| CTGATACTTTCCATGGTACC+AGG | 0.522407 | 3.1:+90288908 | None:intergenic |
| GTGTTTGGACAATCTGGTGC+TGG | 0.529479 | 3.1:-90288845 | MS.gene014419:CDS |
| TGGGGAGGGAATGGATGAGA+TGG | 0.529822 | 3.1:-90286051 | MS.gene014419:CDS |
| GTTTGCCACTCCCTTGGAGG+AGG | 0.531497 | 3.1:-90286939 | MS.gene014419:CDS |
| ACCATGGAAAGTATCAGATC+TGG | 0.532094 | 3.1:-90288902 | MS.gene014419:CDS |
| GGAAAATATGTAAGCGAAGG+TGG | 0.533206 | 3.1:-90289022 | MS.gene014419:CDS |
| GAACTCTGATCTCAGGAAGC+TGG | 0.535008 | 3.1:-90286510 | MS.gene014419:CDS |
| TGTCAGATACCTTTGGAGAT+GGG | 0.536713 | 3.1:+90286832 | None:intergenic |
| GGATCTTGAGCCTGGTACCA+TGG | 0.537137 | 3.1:-90288918 | MS.gene014419:CDS |
| CAATTCAGGAGATGTTTAGG+AGG | 0.541715 | 3.1:-90286130 | MS.gene014419:CDS |
| CAGAACCCGTGCCTCCTCCA+AGG | 0.541892 | 3.1:+90286928 | None:intergenic |
| CAGTCAAGTATCGGCCATGT+CGG | 0.542390 | 3.1:+90286333 | None:intergenic |
| AGATCCATAAGAACTGCTCT+AGG | 0.542823 | 3.1:+90288935 | None:intergenic |
| AGAGGTGATACTTACAGCTA+GGG | 0.546469 | 3.1:+90286685 | None:intergenic |
| AATGGATGAGATGGAGTTCA+CGG | 0.548252 | 3.1:-90286042 | MS.gene014419:CDS |
| GGACGAAAGATCTTACCAAA+AGG | 0.548367 | 3.1:+90288878 | None:intergenic |
| GTATGTATCCCTTACTGTCC+CGG | 0.555378 | 3.1:-90286408 | MS.gene014419:CDS |
| TTGCACCTCTCACTTCTCGT+GGG | 0.556219 | 3.1:-90286439 | MS.gene014419:CDS |
| AGAAAATGCAGATGAGTGTA+TGG | 0.557071 | 3.1:-90286763 | MS.gene014419:CDS |
| CGGAACTGACTCAACAAATG+TGG | 0.558969 | 3.1:-90286388 | MS.gene014419:CDS |
| TTGCAGATGCAGTCAAGTAT+CGG | 0.563760 | 3.1:+90286324 | None:intergenic |
| GACATCTTCAAATTCTTGGG+TGG | 0.565762 | 3.1:+90286179 | None:intergenic |
| ACATCTTCAAATTCTTGGGT+GGG | 0.570008 | 3.1:+90286180 | None:intergenic |
| ACCAGATCTGATACTTTCCA+TGG | 0.574855 | 3.1:+90288901 | None:intergenic |
| TTTGCATTGGTATACTGGGG+AGG | 0.575042 | 3.1:-90286066 | MS.gene014419:CDS |
| CCAGGATGCAATAGCTGAGG+AGG | 0.575079 | 3.1:-90285973 | MS.gene014419:CDS |
| TGATTATGAAGAAGAAGGTG+AGG | 0.578671 | 3.1:-90285946 | MS.gene014419:CDS |
| GCTGGTAATAATTGGGCCAA+AGG | 0.579903 | 3.1:-90288827 | MS.gene014419:CDS |
| AGAACCCGTGCCTCCTCCAA+GGG | 0.582447 | 3.1:+90286929 | None:intergenic |
| AGATCAGAGTTCAATTGACC+AGG | 0.587313 | 3.1:+90286521 | None:intergenic |
| ACTGCATCTGCAATGTTCAG+AGG | 0.592344 | 3.1:-90286314 | MS.gene014419:CDS |
| AATTCAGGAGATGTTTAGGA+GGG | 0.594241 | 3.1:-90286129 | MS.gene014419:CDS |
| GTCAAGTATCGGCCATGTCG+GGG | 0.598025 | 3.1:+90286335 | None:intergenic |
| CTGATTTCTGCAACTATGAG+CGG | 0.598763 | 3.1:-90286566 | MS.gene014419:CDS |
| AGCAGAGTACCAACAATACC+AGG | 0.600651 | 3.1:-90285991 | MS.gene014419:CDS |
| GCGGGGTTACATGTTGTCTG+AGG | 0.600876 | 3.1:-90286547 | MS.gene014419:CDS |
| AGTCAGTTCCGGGACAGTAA+GGG | 0.601789 | 3.1:+90286400 | None:intergenic |
| GAAATGATACTCAATTGGAA+AGG | 0.601847 | 3.1:-90289000 | MS.gene014419:CDS |
| GGAACTGACTCAACAAATGT+GGG | 0.606867 | 3.1:-90286387 | MS.gene014419:CDS |
| ACAATGAAGCTTCTGGTGGT+AGG | 0.609506 | 3.1:-90288964 | MS.gene014419:CDS |
| GCCAAAGGTCATTATACCGA+AGG | 0.611568 | 3.1:-90288812 | MS.gene014419:CDS |
| TCATAGTTGCAGAAATCAGA+TGG | 0.613887 | 3.1:+90286570 | None:intergenic |
| CACGTTCAAGGTGGCCAATG+CGG | 0.629178 | 3.1:-90289106 | MS.gene014419:CDS |
| ACTGGAAAATATGTAAGCGA+AGG | 0.632683 | 3.1:-90289025 | MS.gene014419:CDS |
| TGTGCTGCTGATCCCCGACA+TGG | 0.635297 | 3.1:-90286347 | MS.gene014419:CDS |
| AGGAAAGATGAGCACCAAAG+AGG | 0.640000 | 3.1:-90286294 | MS.gene014419:CDS |
| TGAGACCCACGAGAAGTGAG+AGG | 0.646294 | 3.1:+90286434 | None:intergenic |
| ATTGATATCAAAGATTAGGG+AGG | 0.653042 | 3.1:-90286892 | MS.gene014419:CDS |
| GATTTCTGCAACTATGAGCG+GGG | 0.659247 | 3.1:-90286564 | MS.gene014419:CDS |
| ATACCAGGATGCAATAGCTG+AGG | 0.682886 | 3.1:-90285976 | MS.gene014419:CDS |
| GAGGTGATACTTACAGCTAG+GGG | 0.687744 | 3.1:+90286686 | None:intergenic |
| GAGGTGATATGCGATGAACA+CGG | 0.708035 | 3.1:-90289058 | MS.gene014419:CDS |
| GAGATCTTGCACGTTCAAGG+TGG | 0.713098 | 3.1:-90289115 | MS.gene014419:CDS |
| TATTACAATGAAGCTTCTGG+TGG | 0.730410 | 3.1:-90288968 | MS.gene014419:CDS |
| AATTGGATCCAAATTCTGGG+AGG | 0.748217 | 3.1:-90289077 | MS.gene014419:CDS |
| GGATGAGATGGAGTTCACGG+AGG | 0.764427 | 3.1:-90286039 | MS.gene014419:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAATTATAAAAAAAGTAA+AGG | + | chr3.1:90287512-90287531 | None:intergenic | 10.0% |
| !!! | AGAACTAATTTTTATAAAAA+TGG | - | chr3.1:90287369-90287388 | MS.gene014419:intron | 10.0% |
| !!! | CATAAAATCTATTTTTTTAA+AGG | - | chr3.1:90287473-90287492 | MS.gene014419:intron | 10.0% |
| !!! | GAAAAATAATAACTTTTTTT+TGG | + | chr3.1:90287192-90287211 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATGAATAAA+GGG | + | chr3.1:90287029-90287048 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr3.1:90286964-90286983 | None:intergenic | 15.0% |
| !! | TAAGAAAAATGTATGAATAA+AGG | + | chr3.1:90287030-90287049 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr3.1:90286965-90286984 | None:intergenic | 15.0% |
| !!! | AATAATGATGGTATATTTTA+GGG | - | chr3.1:90286690-90286709 | MS.gene014419:intron | 15.0% |
| !!! | TAATAATGATGGTATATTTT+AGG | - | chr3.1:90286689-90286708 | MS.gene014419:intron | 15.0% |
| !!! | TTTTTGTGTAATAATAATGA+TGG | - | chr3.1:90286678-90286697 | MS.gene014419:intron | 15.0% |
| !! | AAAAAGAACAATATATTTCG+TGG | + | chr3.1:90287745-90287764 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr3.1:90287005-90287024 | None:intergenic | 20.0% |
| !! | AATTCCAATGTTTGTAAAAA+TGG | + | chr3.1:90287658-90287677 | None:intergenic | 20.0% |
| !! | AGAAAAATGTATGAATAAAG+GGG | + | chr3.1:90287028-90287047 | None:intergenic | 20.0% |
| !! | GGTAGTAGTATTTATAAAAT+AGG | - | chr3.1:90287093-90287112 | MS.gene014419:intron | 20.0% |
| !! | TATTATTACACAAAAAGTCA+CGG | + | chr3.1:90286674-90286693 | None:intergenic | 20.0% |
| !! | TCTATTGATATCAAAGATTA+GGG | - | chr3.1:90288152-90288171 | MS.gene014419:intron | 20.0% |
| !! | TTCATTTCAAATGTTTGTTT+AGG | - | chr3.1:90287229-90287248 | MS.gene014419:intron | 20.0% |
| !! | TTCTACCAAAAAAAAAATCA+TGG | - | chr3.1:90287600-90287619 | MS.gene014419:intron | 20.0% |
| !!! | AAATTTCATTCAATTTTGTC+AGG | - | chr3.1:90288078-90288097 | MS.gene014419:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr3.1:90286895-90286914 | None:intergenic | 20.0% |
| !!! | TGAAATGAATCAGTTATTTT+GGG | + | chr3.1:90286917-90286936 | None:intergenic | 20.0% |
| !!! | TTGAAATGAATCAGTTATTT+TGG | + | chr3.1:90286918-90286937 | None:intergenic | 20.0% |
| ! | ATGCACTACTATAAAAGATA+AGG | + | chr3.1:90286833-90286852 | None:intergenic | 25.0% |
| ! | ATTCTTCATACTTTGTTGAA+TGG | - | chr3.1:90288809-90288828 | MS.gene014419:CDS | 25.0% |
| ! | CTCTATTGATATCAAAGATT+AGG | - | chr3.1:90288151-90288170 | MS.gene014419:intron | 25.0% |
| ! | GAAAAAAATCTGAATCAAAC+AGG | + | chr3.1:90287170-90287189 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr3.1:90287006-90287025 | None:intergenic | 25.0% |
| ! | TCATTCTGAGTACAAAATAT+AGG | + | chr3.1:90286646-90286665 | None:intergenic | 25.0% |
| ! | TGATCTTTATGTTAGATTTG+TGG | - | chr3.1:90288019-90288038 | MS.gene014419:intron | 25.0% |
| ! | TGCCAAAAGAAAAATAATAC+CGG | + | chr3.1:90287579-90287598 | None:intergenic | 25.0% |
| ! | TTGATATGTCAGATATGATA+CGG | - | chr3.1:90286714-90286733 | MS.gene014419:CDS | 25.0% |
| ! | TTTGTAATATGTCACAGAAT+TGG | - | chr3.1:90287961-90287980 | MS.gene014419:intron | 25.0% |
| !! | AGAGGATCTAATTCAATTTT+TGG | - | chr3.1:90286549-90286568 | MS.gene014419:CDS | 25.0% |
| !! | GAGGATCTAATTCAATTTTT+GGG | - | chr3.1:90286550-90286569 | MS.gene014419:CDS | 25.0% |
| !! | GCTAATAGCTTTTCATTTTA+AGG | + | chr3.1:90287296-90287315 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr3.1:90286896-90286915 | None:intergenic | 25.0% |
| !!! | TTTTAAGAAAGTAGACTGAA+GGG | - | chr3.1:90287844-90287863 | MS.gene014419:intron | 25.0% |
| !!! | TTTTTAAGAAAGTAGACTGA+AGG | - | chr3.1:90287843-90287862 | MS.gene014419:intron | 25.0% |
| ACAGATAGTGTAGCATTATA+TGG | + | chr3.1:90288252-90288271 | None:intergenic | 30.0% | |
| AGACAACCTTTGATTAATTG+AGG | + | chr3.1:90288400-90288419 | None:intergenic | 30.0% | |
| AGAGAGTAACATGAATGATT+TGG | - | chr3.1:90289032-90289051 | MS.gene014419:CDS | 30.0% | |
| ATTGATATCAAAGATTAGGG+AGG | - | chr3.1:90288155-90288174 | MS.gene014419:intron | 30.0% | |
| ATTGATTGTAGTCACAGAAA+TGG | - | chr3.1:90287526-90287545 | MS.gene014419:intron | 30.0% | |
| CACTACTATAAAAGATAAGG+TGG | + | chr3.1:90286830-90286849 | None:intergenic | 30.0% | |
| CCAATGTTTGTAAAAATGGT+TGG | + | chr3.1:90287654-90287673 | None:intergenic | 30.0% | |
| CTCAATTGTGATTAATGTCT+TGG | - | chr3.1:90286352-90286371 | MS.gene014419:CDS | 30.0% | |
| GAAATGATACTCAATTGGAA+AGG | - | chr3.1:90286047-90286066 | MS.gene014419:CDS | 30.0% | |
| GAAGATGATTATGAAGAAGA+AGG | - | chr3.1:90289096-90289115 | MS.gene014419:CDS | 30.0% | |
| TACTTCAATTACTATACTGC+AGG | + | chr3.1:90286504-90286523 | None:intergenic | 30.0% | |
| TATATTTCGTGGATCTACAT+TGG | + | chr3.1:90287734-90287753 | None:intergenic | 30.0% | |
| TCAGTACCTCAATTAATCAA+AGG | - | chr3.1:90288391-90288410 | MS.gene014419:intron | 30.0% | |
| TTGATTGTAGTCACAGAAAT+GGG | - | chr3.1:90287527-90287546 | MS.gene014419:intron | 30.0% | |
| ! | GAAACATGATGATGATTGAA+AGG | - | chr3.1:90286791-90286810 | MS.gene014419:CDS | 30.0% |
| ! | TACATTGGTTATTCTACAGA+TGG | + | chr3.1:90287719-90287738 | None:intergenic | 30.0% |
| !! | CCAACCATTTTTACAAACAT+TGG | - | chr3.1:90287651-90287670 | MS.gene014419:intron | 30.0% |
| !! | GACCGGTATTATTTTTCTTT+TGG | - | chr3.1:90287574-90287593 | MS.gene014419:intron | 30.0% |
| !!! | ACGTGCCATGATTTTTTTTT+TGG | + | chr3.1:90287608-90287627 | None:intergenic | 30.0% |
| AAAGTAAGCATCATTCTGTC+TGG | + | chr3.1:90288186-90288205 | None:intergenic | 35.0% | |
| AACTGGGCAAACAATAGAAT+GGG | - | chr3.1:90287911-90287930 | MS.gene014419:intron | 35.0% | |
| AATCGTCACGATTTCAATCA+TGG | + | chr3.1:90286452-90286471 | None:intergenic | 35.0% | |
| AATTCAGGAGATGTTTAGGA+GGG | - | chr3.1:90288918-90288937 | MS.gene014419:CDS | 35.0% | |
| AATTTCGTGTTTGGACAATC+TGG | - | chr3.1:90286196-90286215 | MS.gene014419:CDS | 35.0% | |
| ACACTAGACTTCACATTGTT+GGG | + | chr3.1:90288838-90288857 | None:intergenic | 35.0% | |
| ACATCTTCAAATTCTTGGGT+GGG | + | chr3.1:90288870-90288889 | None:intergenic | 35.0% | |
| ACCAAATTGGATCCAAATTC+TGG | - | chr3.1:90285966-90285985 | MS.gene014419:CDS | 35.0% | |
| ACCATAAAAAAGTGAAGACG+AGG | + | chr3.1:90288583-90288602 | None:intergenic | 35.0% | |
| ACTGGAAAATATGTAAGCGA+AGG | - | chr3.1:90286022-90286041 | MS.gene014419:CDS | 35.0% | |
| AGAAAATGCAGATGAGTGTA+TGG | - | chr3.1:90288284-90288303 | MS.gene014419:intron | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr3.1:90286882-90286901 | None:intergenic | 35.0% | |
| AGAGGTCAAATAAATTGGGA+CGG | - | chr3.1:90287069-90287088 | MS.gene014419:intron | 35.0% | |
| AGCCAAGAGGTCAAATAAAT+TGG | - | chr3.1:90287064-90287083 | MS.gene014419:intron | 35.0% | |
| AGGTGGAAATGATACTCAAT+TGG | - | chr3.1:90286042-90286061 | MS.gene014419:CDS | 35.0% | |
| AGTTGAGTTCCCAATAAAAG+TGG | + | chr3.1:90288896-90288915 | None:intergenic | 35.0% | |
| ATACCGACATGGAGTATATA+GGG | - | chr3.1:90287144-90287163 | MS.gene014419:intron | 35.0% | |
| ATTCTATTGTTTGCCCAGTT+AGG | + | chr3.1:90287911-90287930 | None:intergenic | 35.0% | |
| CACTTTATGACATTTGCTTC+AGG | - | chr3.1:90288322-90288341 | MS.gene014419:intron | 35.0% | |
| CCAAATTGGATCCAAATTCT+GGG | - | chr3.1:90285967-90285986 | MS.gene014419:CDS | 35.0% | |
| CCATAAAAAAGTGAAGACGA+GGG | + | chr3.1:90288582-90288601 | None:intergenic | 35.0% | |
| CTCATTGTGTAATTGCAGTT+GGG | - | chr3.1:90288446-90288465 | MS.gene014419:intron | 35.0% | |
| CTTCAATTCAGGAGATGTTT+AGG | - | chr3.1:90288914-90288933 | MS.gene014419:CDS | 35.0% | |
| GAAAAATAATACCGGTCTGT+CGG | + | chr3.1:90287571-90287590 | None:intergenic | 35.0% | |
| GAATGTGCACAAAATTCTAG+AGG | - | chr3.1:90286531-90286550 | MS.gene014419:CDS | 35.0% | |
| GACGACATCTTCAAATTCTT+GGG | + | chr3.1:90288874-90288893 | None:intergenic | 35.0% | |
| GCCAAGAGGTCAAATAAATT+GGG | - | chr3.1:90287065-90287084 | MS.gene014419:intron | 35.0% | |
| GTGTATTACAATGAAGCTTC+TGG | - | chr3.1:90286076-90286095 | MS.gene014419:CDS | 35.0% | |
| TAACTGGGCAAACAATAGAA+TGG | - | chr3.1:90287910-90287929 | MS.gene014419:intron | 35.0% | |
| TATTACAATGAAGCTTCTGG+TGG | - | chr3.1:90286079-90286098 | MS.gene014419:CDS | 35.0% | |
| TCATAGTTGCAGAAATCAGA+TGG | + | chr3.1:90288480-90288499 | None:intergenic | 35.0% | |
| TCATTGTGTAATTGCAGTTG+GGG | - | chr3.1:90288447-90288466 | MS.gene014419:intron | 35.0% | |
| TCCCAATTTATTTGACCTCT+TGG | + | chr3.1:90287069-90287088 | None:intergenic | 35.0% | |
| TGATTATGAAGAAGAAGGTG+AGG | - | chr3.1:90289101-90289120 | MS.gene014419:CDS | 35.0% | |
| TGTATGAATAAAGGGGAAAG+TGG | + | chr3.1:90287021-90287040 | None:intergenic | 35.0% | |
| TGTCCAAACACGAAATTATC+AGG | + | chr3.1:90286193-90286212 | None:intergenic | 35.0% | |
| ! | GATTTGTTCATCAACCTCTT+TGG | + | chr3.1:90288770-90288789 | None:intergenic | 35.0% |
| ! | TCGCTTACATATTTTCCAGT+TGG | + | chr3.1:90286022-90286041 | None:intergenic | 35.0% |
| ! | TGCTTTTAAACATACCGACA+TGG | - | chr3.1:90287133-90287152 | MS.gene014419:intron | 35.0% |
| !! | AAGATGTCGTCCACTTTTAT+TGG | - | chr3.1:90288883-90288902 | MS.gene014419:CDS | 35.0% |
| !! | AATCTGGTGCTGGTAATAAT+TGG | - | chr3.1:90286212-90286231 | MS.gene014419:CDS | 35.0% |
| !! | AGATGTCGTCCACTTTTATT+GGG | - | chr3.1:90288884-90288903 | MS.gene014419:CDS | 35.0% |
| !! | ATCTGGTGCTGGTAATAATT+GGG | - | chr3.1:90286213-90286232 | MS.gene014419:CDS | 35.0% |
| !! | CCTTTTTGCATTGGTATACT+GGG | - | chr3.1:90288977-90288996 | MS.gene014419:CDS | 35.0% |
| !! | CTTTTTGCATTGGTATACTG+GGG | - | chr3.1:90288978-90288997 | MS.gene014419:CDS | 35.0% |
| !! | TTGAGGTACTGAAAAAGAAG+AGG | + | chr3.1:90288383-90288402 | None:intergenic | 35.0% |
| !!! | CGTCTTCACTTTTTTATGGT+TGG | - | chr3.1:90288583-90288602 | MS.gene014419:intron | 35.0% |
| AAAAAGTGAAGACGAGGGAA+TGG | + | chr3.1:90288577-90288596 | None:intergenic | 40.0% | |
| AAAAGTGAAGACGAGGGAAT+GGG | + | chr3.1:90288576-90288595 | None:intergenic | 40.0% | |
| AAGAGGTGATACTTACAGCT+AGG | + | chr3.1:90288366-90288385 | None:intergenic | 40.0% | |
| AATGGATGAGATGGAGTTCA+CGG | - | chr3.1:90289005-90289024 | MS.gene014419:CDS | 40.0% | |
| AATTGGATCCAAATTCTGGG+AGG | - | chr3.1:90285970-90285989 | MS.gene014419:CDS | 40.0% | |
| ACAACTGTGTCAGATACCTT+TGG | + | chr3.1:90288225-90288244 | None:intergenic | 40.0% | |
| ACCAGATCTGATACTTTCCA+TGG | + | chr3.1:90286149-90286168 | None:intergenic | 40.0% | |
| ACCTTCGGTATAATGACCTT+TGG | + | chr3.1:90286239-90286258 | None:intergenic | 40.0% | |
| ACTGGGCAAACAATAGAATG+GGG | - | chr3.1:90287912-90287931 | MS.gene014419:intron | 40.0% | |
| AGAAGGTGAGGAACATTATG+AGG | - | chr3.1:90289113-90289132 | MS.gene014419:CDS | 40.0% | |
| AGAGGTGATACTTACAGCTA+GGG | + | chr3.1:90288365-90288384 | None:intergenic | 40.0% | |
| AGATCAGAGTTCAATTGACC+AGG | + | chr3.1:90288529-90288548 | None:intergenic | 40.0% | |
| AGATCCATAAGAACTGCTCT+AGG | + | chr3.1:90286115-90286134 | None:intergenic | 40.0% | |
| AGCAGCACACATCATATTCT+TGG | + | chr3.1:90288689-90288708 | None:intergenic | 40.0% | |
| AGCAGTTTACTGCAATGTTC+CGG | - | chr3.1:90288947-90288966 | MS.gene014419:CDS | 40.0% | |
| ATCCAATTTGGTTACCGCAT+TGG | + | chr3.1:90285958-90285977 | None:intergenic | 40.0% | |
| ATGGTCAAGGTTTCCTAACT+GGG | - | chr3.1:90287895-90287914 | MS.gene014419:intron | 40.0% | |
| CAATTCAGGAGATGTTTAGG+AGG | - | chr3.1:90288917-90288936 | MS.gene014419:CDS | 40.0% | |
| CACACTAGACTTCACATTGT+TGG | + | chr3.1:90288839-90288858 | None:intergenic | 40.0% | |
| CATACCGACATGGAGTATAT+AGG | - | chr3.1:90287143-90287162 | MS.gene014419:intron | 40.0% | |
| CCAACTGCAATTACACAATG+AGG | + | chr3.1:90288448-90288467 | None:intergenic | 40.0% | |
| CCCAGAATTTGGATCCAATT+TGG | + | chr3.1:90285970-90285989 | None:intergenic | 40.0% | |
| CCCAGTATACCAATGCAAAA+AGG | + | chr3.1:90288980-90288999 | None:intergenic | 40.0% | |
| CCTCATTGTGTAATTGCAGT+TGG | - | chr3.1:90288445-90288464 | MS.gene014419:intron | 40.0% | |
| CCTGACTTTCTGTAGATCTT+GGG | - | chr3.1:90286769-90286788 | MS.gene014419:CDS | 40.0% | |
| CGTCCTGATAATTTCGTGTT+TGG | - | chr3.1:90286187-90286206 | MS.gene014419:CDS | 40.0% | |
| CTATTGCATCCTGGTATTGT+TGG | + | chr3.1:90289068-90289087 | None:intergenic | 40.0% | |
| CTGATTTCTGCAACTATGAG+CGG | - | chr3.1:90288481-90288500 | MS.gene014419:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr3.1:90286881-90286900 | None:intergenic | 40.0% | |
| GACATCTTCAAATTCTTGGG+TGG | + | chr3.1:90288871-90288890 | None:intergenic | 40.0% | |
| GAGAATTGTGATTGCTTGCA+AGG | - | chr3.1:90286304-90286323 | MS.gene014419:CDS | 40.0% | |
| GGAAAATATGTAAGCGAAGG+TGG | - | chr3.1:90286025-90286044 | MS.gene014419:CDS | 40.0% | |
| GGACGAAAGATCTTACCAAA+AGG | + | chr3.1:90286172-90286191 | None:intergenic | 40.0% | |
| GGACGACATCTTCAAATTCT+TGG | + | chr3.1:90288875-90288894 | None:intergenic | 40.0% | |
| GTCAATTGAACTCTGATCTC+AGG | - | chr3.1:90288530-90288549 | MS.gene014419:intron | 40.0% | |
| TATGGTCAAGGTTTCCTAAC+TGG | - | chr3.1:90287894-90287913 | MS.gene014419:intron | 40.0% | |
| TCCTGACTTTCTGTAGATCT+TGG | - | chr3.1:90286768-90286787 | MS.gene014419:CDS | 40.0% | |
| TGATTTCTGCAACTATGAGC+GGG | - | chr3.1:90288482-90288501 | MS.gene014419:intron | 40.0% | |
| TGGGAACTCAACTTCAATTC+AGG | - | chr3.1:90288903-90288922 | MS.gene014419:CDS | 40.0% | |
| TGTTCCTAGAGCAGTTCTTA+TGG | - | chr3.1:90286108-90286127 | MS.gene014419:CDS | 40.0% | |
| TTGAAATCGTGACGATTCAG+AGG | - | chr3.1:90286455-90286474 | MS.gene014419:CDS | 40.0% | |
| TTGCAGATGCAGTCAAGTAT+CGG | + | chr3.1:90288726-90288745 | None:intergenic | 40.0% | |
| ! | ACATTTGTTGAGTCAGTTCC+GGG | + | chr3.1:90288660-90288679 | None:intergenic | 40.0% |
| ! | AGTATCAGATCTGGTCCTTT+TGG | - | chr3.1:90286154-90286173 | MS.gene014419:CDS | 40.0% |
| ! | ATGATGATTGAAAGGCATGC+AGG | - | chr3.1:90286799-90286818 | MS.gene014419:CDS | 40.0% |
| ! | CACATTTGTTGAGTCAGTTC+CGG | + | chr3.1:90288661-90288680 | None:intergenic | 40.0% |
| ! | CATCTGCATTTTCTACCAGT+TGG | + | chr3.1:90288278-90288297 | None:intergenic | 40.0% |
| ! | GGAACTGACTCAACAAATGT+GGG | - | chr3.1:90288660-90288679 | MS.gene014419:intron | 40.0% |
| ! | TGTCAGATACCTTTGGAGAT+GGG | + | chr3.1:90288218-90288237 | None:intergenic | 40.0% |
| !! | ACCATGGAAAGTATCAGATC+TGG | - | chr3.1:90286145-90286164 | MS.gene014419:CDS | 40.0% |
| !! | GCCTTTTTGCATTGGTATAC+TGG | - | chr3.1:90288976-90288995 | MS.gene014419:CDS | 40.0% |
| !!! | CCCTCGTCTTCACTTTTTTA+TGG | - | chr3.1:90288579-90288598 | MS.gene014419:intron | 40.0% |
| AAAAATTACTCCCTCCGTCC+CGG | - | chr3.1:90286860-90286879 | MS.gene014419:CDS | 45.0% | |
| AAATAATACCGGTCTGTCGG+TGG | + | chr3.1:90287568-90287587 | None:intergenic | 45.0% | |
| AATGCAAAAAGGCTTTGCGC+CGG | + | chr3.1:90288969-90288988 | None:intergenic | 45.0% | |
| ACAATGAAGCTTCTGGTGGT+AGG | - | chr3.1:90286083-90286102 | MS.gene014419:CDS | 45.0% | |
| ACTGCATCTGCAATGTTCAG+AGG | - | chr3.1:90288733-90288752 | MS.gene014419:intron | 45.0% | |
| AGAGAGATCTTGCACGTTCA+AGG | - | chr3.1:90285929-90285948 | MS.gene014419:CDS | 45.0% | |
| AGGAAAGATGAGCACCAAAG+AGG | - | chr3.1:90288753-90288772 | MS.gene014419:CDS | 45.0% | |
| AGGCCCTATATACTCCATGT+CGG | + | chr3.1:90287150-90287169 | None:intergenic | 45.0% | |
| AGTAGTGTTGCACAGAGCTA+TGG | - | chr3.1:90287876-90287895 | MS.gene014419:intron | 45.0% | |
| ATACCAGGATGCAATAGCTG+AGG | - | chr3.1:90289071-90289090 | MS.gene014419:CDS | 45.0% | |
| CCCAAGATCTACAGAAAGTC+AGG | + | chr3.1:90286772-90286791 | None:intergenic | 45.0% | |
| CTGATACTTTCCATGGTACC+AGG | + | chr3.1:90286142-90286161 | None:intergenic | 45.0% | |
| CTGTCGGTGGTTGTAATCAT+AGG | + | chr3.1:90287555-90287574 | None:intergenic | 45.0% | |
| GAGGTGATACTTACAGCTAG+GGG | + | chr3.1:90288364-90288383 | None:intergenic | 45.0% | |
| GAGGTGATATGCGATGAACA+CGG | - | chr3.1:90285989-90286008 | MS.gene014419:CDS | 45.0% | |
| GATTTCTGCAACTATGAGCG+GGG | - | chr3.1:90288483-90288502 | MS.gene014419:intron | 45.0% | |
| GCATATCACCTCCCAGAATT+TGG | + | chr3.1:90285981-90286000 | None:intergenic | 45.0% | |
| GCCAAAGGTCATTATACCGA+AGG | - | chr3.1:90286235-90286254 | MS.gene014419:CDS | 45.0% | |
| GCTGGTAATAATTGGGCCAA+AGG | - | chr3.1:90286220-90286239 | MS.gene014419:CDS | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | - | chr3.1:90287072-90287091 | MS.gene014419:intron | 45.0% | |
| GTATGTATCCCTTACTGTCC+CGG | - | chr3.1:90288639-90288658 | MS.gene014419:intron | 45.0% | |
| GTCAATCAACTCAGCACCTT+CGG | + | chr3.1:90286254-90286273 | None:intergenic | 45.0% | |
| GTTCTTATGGATCTTGAGCC+TGG | - | chr3.1:90286121-90286140 | MS.gene014419:CDS | 45.0% | |
| TACACTATCTGTCCACCAAC+TGG | - | chr3.1:90288260-90288279 | MS.gene014419:intron | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+AGG | - | chr3.1:90287051-90287070 | MS.gene014419:intron | 45.0% | |
| ! | ACATGTTGTCTGAGGTTTCC+TGG | - | chr3.1:90288508-90288527 | MS.gene014419:intron | 45.0% |
| ! | AGCAGAGTACCAACAATACC+AGG | - | chr3.1:90289056-90289075 | MS.gene014419:CDS | 45.0% |
| ! | ATGATTGAAAGGCATGCAGG+AGG | - | chr3.1:90286802-90286821 | MS.gene014419:CDS | 45.0% |
| ! | CGGAACTGACTCAACAAATG+TGG | - | chr3.1:90288659-90288678 | MS.gene014419:intron | 45.0% |
| ! | CTCTGTTTTCCCATCTCCAA+AGG | - | chr3.1:90288206-90288225 | MS.gene014419:intron | 45.0% |
| ! | CTGCATTTTCTACCAGTTGG+TGG | + | chr3.1:90288275-90288294 | None:intergenic | 45.0% |
| ! | GTGTCAGATACCTTTGGAGA+TGG | + | chr3.1:90288219-90288238 | None:intergenic | 45.0% |
| ! | TGATTGAAAGGCATGCAGGA+GGG | - | chr3.1:90286803-90286822 | MS.gene014419:CDS | 45.0% |
| ! | TTGCATTGGTATACTGGGGA+GGG | - | chr3.1:90288982-90289001 | MS.gene014419:CDS | 45.0% |
| ! | TTTGCATTGGTATACTGGGG+AGG | - | chr3.1:90288981-90289000 | MS.gene014419:CDS | 45.0% |
| !! | TTTCAAGTTTGCCACTCCCT+TGG | - | chr3.1:90288102-90288121 | MS.gene014419:intron | 45.0% |
| AGTCAGTTCCGGGACAGTAA+GGG | + | chr3.1:90288650-90288669 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr3.1:90286877-90286896 | None:intergenic | 50.0% | |
| GAACTCTGATCTCAGGAAGC+TGG | - | chr3.1:90288537-90288556 | MS.gene014419:intron | 50.0% | |
| GAGATCTTGCACGTTCAAGG+TGG | - | chr3.1:90285932-90285951 | MS.gene014419:CDS | 50.0% | |
| GATTACAACCACCGACAGAC+CGG | - | chr3.1:90287557-90287576 | MS.gene014419:intron | 50.0% | |
| GGCCAATGCGGTAACCAAAT+TGG | - | chr3.1:90285953-90285972 | MS.gene014419:CDS | 50.0% | |
| GTGTTTGGACAATCTGGTGC+TGG | - | chr3.1:90286202-90286221 | MS.gene014419:CDS | 50.0% | |
| GTTGCACAGAGCTATGGTCA+AGG | - | chr3.1:90287882-90287901 | MS.gene014419:intron | 50.0% | |
| TTGCACCTCTCACTTCTCGT+GGG | - | chr3.1:90288608-90288627 | MS.gene014419:intron | 50.0% | |
| TTGGTATACTGGGGAGGGAA+TGG | - | chr3.1:90288987-90289006 | MS.gene014419:CDS | 50.0% | |
| TTTGCACCTCTCACTTCTCG+TGG | - | chr3.1:90288607-90288626 | MS.gene014419:intron | 50.0% | |
| ! | GGCGCAAAGCCTTTTTGCAT+TGG | - | chr3.1:90288968-90288987 | MS.gene014419:CDS | 50.0% |
| !! | AGTCAAGTATCGGCCATGTC+GGG | + | chr3.1:90288716-90288735 | None:intergenic | 50.0% |
| !! | CAGTCAAGTATCGGCCATGT+CGG | + | chr3.1:90288717-90288736 | None:intergenic | 50.0% |
| !! | GAACACGGCATTGATCCAAC+TGG | - | chr3.1:90286004-90286023 | MS.gene014419:CDS | 50.0% |
| CAAGTTTGCCACTCCCTTGG+AGG | - | chr3.1:90288105-90288124 | MS.gene014419:intron | 55.0% | |
| CACGTTCAAGGTGGCCAATG+CGG | - | chr3.1:90285941-90285960 | MS.gene014419:CDS | 55.0% | |
| CCAGGATGCAATAGCTGAGG+AGG | - | chr3.1:90289074-90289093 | MS.gene014419:CDS | 55.0% | |
| CCTCCTCAGCTATTGCATCC+TGG | + | chr3.1:90289077-90289096 | None:intergenic | 55.0% | |
| GAGTCAGTTCCGGGACAGTA+AGG | + | chr3.1:90288651-90288670 | None:intergenic | 55.0% | |
| GCGGGGTTACATGTTGTCTG+AGG | - | chr3.1:90288500-90288519 | MS.gene014419:intron | 55.0% | |
| GGATCTTGAGCCTGGTACCA+TGG | - | chr3.1:90286129-90286148 | MS.gene014419:CDS | 55.0% | |
| GGATGAGATGGAGTTCACGG+AGG | - | chr3.1:90289008-90289027 | MS.gene014419:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr3.1:90286873-90286892 | None:intergenic | 55.0% | |
| TGAGACCCACGAGAAGTGAG+AGG | + | chr3.1:90288616-90288635 | None:intergenic | 55.0% | |
| TGGGGAGGGAATGGATGAGA+TGG | - | chr3.1:90288996-90289015 | MS.gene014419:CDS | 55.0% | |
| !! | GTCAAGTATCGGCCATGTCG+GGG | + | chr3.1:90288715-90288734 | None:intergenic | 55.0% |
| AGAACCCGTGCCTCCTCCAA+GGG | + | chr3.1:90288121-90288140 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr3.1:90286874-90286893 | None:intergenic | 60.0% | |
| GTTTGCCACTCCCTTGGAGG+AGG | - | chr3.1:90288108-90288127 | MS.gene014419:intron | 60.0% | |
| ! | TGTGCTGCTGATCCCCGACA+TGG | - | chr3.1:90288700-90288719 | MS.gene014419:intron | 60.0% |
| CAGAACCCGTGCCTCCTCCA+AGG | + | chr3.1:90288122-90288141 | None:intergenic | 65.0% | |
| CCACTCCCTTGGAGGAGGCA+CGG | - | chr3.1:90288113-90288132 | MS.gene014419:intron | 65.0% | |
| ! | AGGAGGCACGGGTTCTGGCA+TGG | - | chr3.1:90288125-90288144 | MS.gene014419:intron | 65.0% |
| ! | CACTCCCTTGGAGGAGGCAC+GGG | - | chr3.1:90288114-90288133 | MS.gene014419:intron | 65.0% |
| ! | CTTGGAGGAGGCACGGGTTC+TGG | - | chr3.1:90288120-90288139 | MS.gene014419:intron | 65.0% |
| ! | GGAGGCACGGGTTCTGGCAT+GGG | - | chr3.1:90288126-90288145 | MS.gene014419:intron | 65.0% |
| CCGTGCCTCCTCCAAGGGAG+TGG | + | chr3.1:90288116-90288135 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 90285926 | 90289143 | 90285926 | ID=MS.gene014419 |
| chr3.1 | mRNA | 90285926 | 90289143 | 90285926 | ID=MS.gene014419.t1;Parent=MS.gene014419 |
| chr3.1 | exon | 90288744 | 90289143 | 90288744 | ID=MS.gene014419.t1.exon1;Parent=MS.gene014419.t1 |
| chr3.1 | CDS | 90288744 | 90289143 | 90288744 | ID=cds.MS.gene014419.t1;Parent=MS.gene014419.t1 |
| chr3.1 | exon | 90286700 | 90286969 | 90286700 | ID=MS.gene014419.t1.exon2;Parent=MS.gene014419.t1 |
| chr3.1 | CDS | 90286700 | 90286969 | 90286700 | ID=cds.MS.gene014419.t1;Parent=MS.gene014419.t1 |
| chr3.1 | exon | 90285926 | 90286605 | 90285926 | ID=MS.gene014419.t1.exon3;Parent=MS.gene014419.t1 |
| chr3.1 | CDS | 90285926 | 90286605 | 90285926 | ID=cds.MS.gene014419.t1;Parent=MS.gene014419.t1 |
| Gene Sequence |
| Protein sequence |
